Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75753.t1 | XP_024638141.1 | 95.1 | 710 | 32 | 1 | 1 | 710 | 1 | 707 | 0.00E+00 | 1393.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75753.t1 | Q9C810 | 52.4 | 710 | 290 | 20 | 2 | 692 | 3 | 683 | 5.5e-199 | 695.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75753.t1 | A0A396I2D4 | 95.1 | 710 | 32 | 1 | 1 | 710 | 1 | 707 | 0.0e+00 | 1393.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene75753.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75753.t1 | MTR_4g035550 | 94.922 | 709 | 33 | 1 | 1 | 709 | 1 | 706 | 0.0 | 1407 |
| MS.gene75753.t1 | MTR_1g076990 | 49.356 | 699 | 335 | 9 | 1 | 693 | 2 | 687 | 0.0 | 682 |
| MS.gene75753.t1 | MTR_1g076990 | 49.281 | 556 | 263 | 9 | 144 | 693 | 3 | 545 | 0.0 | 528 |
| MS.gene75753.t1 | MTR_1g076990 | 46.154 | 481 | 240 | 9 | 220 | 693 | 49 | 517 | 9.10e-137 | 413 |
| MS.gene75753.t1 | MTR_5g040700 | 32.640 | 625 | 344 | 20 | 88 | 674 | 76 | 661 | 1.28e-91 | 300 |
| MS.gene75753.t1 | MTR_5g077750 | 27.831 | 733 | 395 | 19 | 12 | 672 | 11 | 681 | 2.64e-85 | 284 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75753.t1 | AT1G33420 | 52.521 | 714 | 291 | 21 | 2 | 696 | 3 | 687 | 0.0 | 706 |
| MS.gene75753.t1 | AT1G33420 | 51.586 | 599 | 248 | 16 | 112 | 696 | 12 | 582 | 0.0 | 585 |
| MS.gene75753.t1 | AT5G22260 | 30.556 | 612 | 363 | 13 | 88 | 668 | 81 | 661 | 1.30e-86 | 286 |
| MS.gene75753.t1 | AT1G66170 | 28.302 | 636 | 356 | 16 | 82 | 668 | 69 | 653 | 3.00e-78 | 265 |
| MS.gene75753.t1 | AT2G01810 | 33.333 | 255 | 128 | 6 | 81 | 329 | 72 | 290 | 1.85e-35 | 143 |
| MS.gene75753.t1 | AT2G01810 | 27.083 | 336 | 195 | 11 | 356 | 668 | 374 | 682 | 6.13e-29 | 123 |
| MS.gene75753.t1 | AT2G07714 | 35.593 | 118 | 73 | 1 | 214 | 328 | 1 | 118 | 2.95e-22 | 95.5 |
| MS.gene75753.t1 | AT1G32810 | 41.270 | 63 | 34 | 1 | 620 | 682 | 22 | 81 | 4.62e-11 | 67.0 |
Find 175 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTGATATTATGGGTTTC+TGG | 0.093213 | 4.2:-70128048 | MS.gene75753:CDS |
| CTTACAGTCAAGAAGCTTTC+TGG | 0.134184 | 4.2:+70127047 | None:intergenic |
| GGTAATTGGGGTTATGAATT+TGG | 0.134330 | 4.2:-70127823 | MS.gene75753:CDS |
| GGTCACTTGCTTACTCTTAA+TGG | 0.146278 | 4.2:-70128100 | MS.gene75753:CDS |
| ATGGATTTGTCCAAGAAATT+TGG | 0.185371 | 4.2:-70127895 | MS.gene75753:CDS |
| GCTACCTTGCTTCAGATAAT+TGG | 0.200423 | 4.2:+70128320 | None:intergenic |
| GGCATTCATGGTATGGTAAT+TGG | 0.203027 | 4.2:-70127837 | MS.gene75753:CDS |
| TCTCTCTGGATCTGATATTA+TGG | 0.217498 | 4.2:-70128056 | MS.gene75753:CDS |
| TATTTCTCTTTACCAGTCTT+TGG | 0.220061 | 4.2:-70127680 | MS.gene75753:CDS |
| CTCTCTGGATCTGATATTAT+GGG | 0.236588 | 4.2:-70128055 | MS.gene75753:CDS |
| CCTGTAGTTTATTATGTTCA+TGG | 0.254361 | 4.2:-70127543 | MS.gene75753:CDS |
| CACCCATTTGGCCTCATTAC+AGG | 0.263526 | 4.2:+70127459 | None:intergenic |
| ATCAGAAATCACTTGCTCTT+TGG | 0.265036 | 4.2:+70127158 | None:intergenic |
| AATATAGACCAAAGATTAAT+AGG | 0.265549 | 4.2:-70127089 | MS.gene75753:CDS |
| TTTGTGCAGCTTTGTCTGTT+AGG | 0.268783 | 4.2:-70128018 | MS.gene75753:intron |
| ATAATCCAGCCCAAATTTCT+TGG | 0.276606 | 4.2:+70127885 | None:intergenic |
| GGTGATGGGTGGTCTTCTTT+AGG | 0.279988 | 4.2:+70126934 | None:intergenic |
| TTTAGCAGTCTCTGCACTCC+TGG | 0.291770 | 4.2:+70127585 | None:intergenic |
| GTGACAAGGCAAACTCTTAA+AGG | 0.292184 | 4.2:-70127439 | MS.gene75753:CDS |
| GTAATTGGGGTTATGAATTT+GGG | 0.295494 | 4.2:-70127822 | MS.gene75753:CDS |
| TAGAACCAATTCCAACAAAA+AGG | 0.298710 | 4.2:+70127621 | None:intergenic |
| TTTGTAGCCGTGAAACTTCT+AGG | 0.308688 | 4.2:-70126811 | MS.gene75753:CDS |
| AGCGATATCACTTCATAATA+AGG | 0.310055 | 4.2:-70128402 | MS.gene75753:CDS |
| GCATTCATGGTATGGTAATT+GGG | 0.312049 | 4.2:-70127836 | MS.gene75753:CDS |
| CGTTCCGGAACGGTGTTTAC+AGG | 0.313794 | 4.2:-70129293 | MS.gene75753:CDS |
| CTTGTCCTCATTATCGTTCC+AGG | 0.340777 | 4.2:-70127734 | MS.gene75753:CDS |
| GTATACCCTAAAATTCCTTC+TGG | 0.348946 | 4.2:-70126764 | MS.gene75753:CDS |
| CATCTAGTGCTATTGAATTC+AGG | 0.352626 | 4.2:-70127306 | MS.gene75753:intron |
| GCAATAGAGCTTAATCCATT+AGG | 0.369000 | 4.2:+70127192 | None:intergenic |
| CTTCTGCCGCCGTACCGTTC+CGG | 0.377226 | 4.2:-70129308 | MS.gene75753:CDS |
| ATCTGATATTATGGGTTTCT+GGG | 0.378053 | 4.2:-70128047 | MS.gene75753:CDS |
| AGTTTGCCTTGTCACCCATT+TGG | 0.383313 | 4.2:+70127447 | None:intergenic |
| ATATTATGGGTTTCTGGGAT+AGG | 0.384205 | 4.2:-70128042 | MS.gene75753:CDS |
| TACCGAAGATGCATACAAAA+TGG | 0.385391 | 4.2:-70127782 | MS.gene75753:CDS |
| TGGATTTGTCCAAGAAATTT+GGG | 0.390776 | 4.2:-70127894 | MS.gene75753:CDS |
| GCCGTGAAACTTCTAGGATA+TGG | 0.393856 | 4.2:-70126805 | MS.gene75753:CDS |
| TGACAAGGCAAACTCTTAAA+GGG | 0.406437 | 4.2:-70127438 | MS.gene75753:CDS |
| GGTTATGAGGTCCTCGATCC+TGG | 0.408649 | 4.2:+70127716 | None:intergenic |
| GGTGGCTCGTCGCTTCTCTC+TGG | 0.410342 | 4.2:-70128070 | MS.gene75753:CDS |
| CAGAAATATCTCCGGTGGTT+GGG | 0.411672 | 4.2:+70129337 | None:intergenic |
| AGACTGAAGTCAAGAAGCTC+TGG | 0.412375 | 4.2:+70127391 | None:intergenic |
| CAATTGCCAGAGGGCATTCA+TGG | 0.418503 | 4.2:-70127849 | MS.gene75753:CDS |
| CTTCTGTTCCTCGCTCCATT+CGG | 0.419691 | 4.2:+70126677 | None:intergenic |
| ACTGTCAATTCCAGCACATC+TGG | 0.423348 | 4.2:+70126567 | None:intergenic |
| CATGTGATACCTGTGGTGTC+TGG | 0.429395 | 4.2:-70126597 | MS.gene75753:CDS |
| TGTGATCAATGTCGTGTTGT+TGG | 0.430361 | 4.2:-70129099 | MS.gene75753:intron |
| TATACCCTAAAATTCCTTCT+GGG | 0.437390 | 4.2:-70126763 | MS.gene75753:CDS |
| GGGGCAGTGGGTAGGCGTAT+TGG | 0.443315 | 4.2:-70127418 | MS.gene75753:CDS |
| AGATTGGCTCATGTGCCTAA+TGG | 0.445142 | 4.2:-70127207 | MS.gene75753:CDS |
| GCAAACTCTTAAAGGGGCAG+TGG | 0.450934 | 4.2:-70127431 | MS.gene75753:CDS |
| ACCATATCCTAGAAGTTTCA+CGG | 0.450976 | 4.2:+70126804 | None:intergenic |
| ATTAACTCAGGCGGTGGTGA+TGG | 0.451540 | 4.2:+70126919 | None:intergenic |
| TTGAACTTCAACTGTACCAT+TGG | 0.453345 | 4.2:+70126735 | None:intergenic |
| TGCCTTCAGCTCTTAAGATC+TGG | 0.455075 | 4.2:-70126981 | MS.gene75753:CDS |
| ATGTGTTTAATTTACAAGCC+TGG | 0.455360 | 4.2:+70126479 | None:intergenic |
| CGTGTTGGAGAGGTTGGTGA+TGG | 0.463438 | 4.2:-70129195 | MS.gene75753:CDS |
| CTTACTCTTAATGGAAAAGA+AGG | 0.464543 | 4.2:-70128091 | MS.gene75753:CDS |
| CAAGGGAAATCAGTTGCAAA+TGG | 0.466137 | 4.2:-70127358 | MS.gene75753:CDS |
| TCACTTGCTCTTTGGAAGGA+TGG | 0.470398 | 4.2:+70127166 | None:intergenic |
| TGACTGTAAGCAATTTATGA+AGG | 0.473976 | 4.2:-70127034 | MS.gene75753:CDS |
| CACCAGTGACTTCATTCAAT+AGG | 0.474466 | 4.2:+70126866 | None:intergenic |
| TGACTGCATTTGCGGTACTA+AGG | 0.475022 | 4.2:-70126644 | MS.gene75753:CDS |
| GTGCCTGTAATGAGGCCAAA+TGG | 0.478860 | 4.2:-70127462 | MS.gene75753:CDS |
| CATGGTGTTGTACATGCTAA+TGG | 0.479985 | 4.2:-70128127 | MS.gene75753:CDS |
| CATTTCTGCTGATGATCTTG+AGG | 0.481146 | 4.2:-70128194 | MS.gene75753:CDS |
| GTTGTACATGCTAATGGTTA+TGG | 0.485683 | 4.2:-70128121 | MS.gene75753:CDS |
| GTTCAGTTTCAGCCAAAGAC+TGG | 0.486581 | 4.2:+70127668 | None:intergenic |
| GATGGAGGTGATGTTTCGTC+TGG | 0.488976 | 4.2:-70129177 | MS.gene75753:CDS |
| CTGCTGATGATCTTGAGGAA+TGG | 0.489195 | 4.2:-70128189 | MS.gene75753:CDS |
| TGGAAGGTTGACTGCATTTG+CGG | 0.490118 | 4.2:-70126652 | MS.gene75753:CDS |
| GAAACCTGTAAACACCGTTC+CGG | 0.490501 | 4.2:+70129289 | None:intergenic |
| TTAGCAGTCTCTGCACTCCT+GGG | 0.490833 | 4.2:+70127586 | None:intergenic |
| AGGTGATGTTTCGTCTGGTT+TGG | 0.491601 | 4.2:-70129172 | MS.gene75753:CDS |
| CTCTTAAAGGGGCAGTGGGT+AGG | 0.492217 | 4.2:-70127426 | MS.gene75753:CDS |
| TGGCAGATCTTGTTTCGTGT+TGG | 0.492289 | 4.2:-70129210 | MS.gene75753:CDS |
| TGGGGTTATGAATTTGGGAC+TGG | 0.492477 | 4.2:-70127817 | MS.gene75753:CDS |
| CCATGAACATAATAAACTAC+AGG | 0.494448 | 4.2:+70127543 | None:intergenic |
| ACATCTCTTACATACAAACT+TGG | 0.497300 | 4.2:+70126528 | None:intergenic |
| ATGGGTGGTCTTCTTTAGGA+TGG | 0.498222 | 4.2:+70126938 | None:intergenic |
| TAGGGTATACACACGATCTC+GGG | 0.503961 | 4.2:+70126777 | None:intergenic |
| CTAAGGATGATGATGGAGAA+AGG | 0.503983 | 4.2:-70126627 | MS.gene75753:CDS |
| CGATGTTGAAGATGTGCAGC+AGG | 0.505393 | 4.2:-70127512 | MS.gene75753:CDS |
| GACTGAAGTCAAGAAGCTCT+GGG | 0.506399 | 4.2:+70127392 | None:intergenic |
| AGAGAAATAACAGACCGTAC+AGG | 0.507389 | 4.2:+70127694 | None:intergenic |
| TTAGGGTATACACACGATCT+CGG | 0.508674 | 4.2:+70126776 | None:intergenic |
| GCAGAAATATCTCCGGTGGT+TGG | 0.512326 | 4.2:+70129336 | None:intergenic |
| TGGCTGCATACCAGATGTGC+TGG | 0.517639 | 4.2:-70126577 | MS.gene75753:CDS |
| TTTCTCTCATTCCCAACCAC+CGG | 0.518527 | 4.2:-70129348 | MS.gene75753:CDS |
| TTGTTTCGTGTTGGAGAGGT+TGG | 0.522213 | 4.2:-70129201 | MS.gene75753:CDS |
| AATGGTACAGTTGAAGTTCA+AGG | 0.522348 | 4.2:-70126733 | MS.gene75753:CDS |
| TTTGTCCAAGAAATTTGGGC+TGG | 0.528223 | 4.2:-70127890 | MS.gene75753:CDS |
| GAGAAATAACAGACCGTACA+GGG | 0.531821 | 4.2:+70127695 | None:intergenic |
| GCCAGAGGGCATTCATGGTA+TGG | 0.532503 | 4.2:-70127844 | MS.gene75753:CDS |
| TTACAGGAAGGTTACTGTGA+TGG | 0.535841 | 4.2:-70127914 | MS.gene75753:intron |
| TTAACTCAGGCGGTGGTGAT+GGG | 0.538447 | 4.2:+70126920 | None:intergenic |
| GAAATCACTTGCTCTTTGGA+AGG | 0.542791 | 4.2:+70127162 | None:intergenic |
| TGCCTGTAATGAGGCCAAAT+GGG | 0.548171 | 4.2:-70127461 | MS.gene75753:CDS |
| GTTGGAGAGGTTGGTGATGG+AGG | 0.549357 | 4.2:-70129192 | MS.gene75753:CDS |
| CAAAGACCTTGCACTAAATG+TGG | 0.549659 | 4.2:-70128352 | MS.gene75753:CDS |
| TTCCTTCTGGGGTCAACCAA+TGG | 0.553492 | 4.2:-70126751 | MS.gene75753:CDS |
| AATCCGTGTGGGAGATAACC+AGG | 0.554516 | 4.2:-70126497 | MS.gene75753:CDS |
| TGTGCAGCAGGCTTTGATCA+AGG | 0.555297 | 4.2:-70127500 | MS.gene75753:CDS |
| TACCATTGGTTGACCCCAGA+AGG | 0.556401 | 4.2:+70126749 | None:intergenic |
| AAGAGGATGTTACGAGGTCG+AGG | 0.557183 | 4.2:-70129131 | MS.gene75753:CDS |
| CACATATTGCAGAGATGAAG+CGG | 0.558172 | 4.2:-70126461 | MS.gene75753:CDS |
| TTCAGTCTTAAGCACTTGCA+AGG | 0.558304 | 4.2:-70127376 | MS.gene75753:CDS |
| TGGAGCGAGGAACAGAAGAA+TGG | 0.559421 | 4.2:-70126672 | MS.gene75753:CDS |
| GAAATCAGTTGCAAATGGAA+TGG | 0.561635 | 4.2:-70127353 | MS.gene75753:CDS |
| CACCAGATCTTAAGAGCTGA+AGG | 0.563451 | 4.2:+70126979 | None:intergenic |
| TGCGGTACTAAGGATGATGA+TGG | 0.563746 | 4.2:-70126634 | MS.gene75753:CDS |
| CTGGAACGATAATGAGGACA+AGG | 0.564920 | 4.2:+70127735 | None:intergenic |
| GAACGGTACGGCGGCAGAAG+CGG | 0.566218 | 4.2:+70129311 | None:intergenic |
| TGAGAGAAAATCGTAAAGAT+CGG | 0.568309 | 4.2:+70129362 | None:intergenic |
| TACTCTTGACATTGTTGAAG+AGG | 0.570128 | 4.2:-70129148 | MS.gene75753:CDS |
| ACCATACCATGAATGCCCTC+TGG | 0.571735 | 4.2:+70127843 | None:intergenic |
| CTGTAAACACCGTTCCGGAA+CGG | 0.571989 | 4.2:+70129294 | None:intergenic |
| ATCTGCCACGTCATCAGCGA+CGG | 0.573382 | 4.2:+70129225 | None:intergenic |
| GGAGTTCCACATTTAGTGCA+AGG | 0.575869 | 4.2:+70128346 | None:intergenic |
| AGCGGCAGCAGAAATATCTC+CGG | 0.578363 | 4.2:+70129329 | None:intergenic |
| GATCTTGTTTCGTGTTGGAG+AGG | 0.579130 | 4.2:-70129205 | MS.gene75753:CDS |
| CTCTCCAATTATCTGAAGCA+AGG | 0.580589 | 4.2:-70128324 | MS.gene75753:intron |
| GAATTCAATAGCACTAGATG+TGG | 0.582215 | 4.2:+70127309 | None:intergenic |
| TCGATCCTGGAACGATAATG+AGG | 0.584434 | 4.2:+70127729 | None:intergenic |
| TGCTTCATGCAATTGCCAGA+GGG | 0.584514 | 4.2:-70127858 | MS.gene75753:CDS |
| ACATAATAAACTACAGGGAG+TGG | 0.584555 | 4.2:+70127549 | None:intergenic |
| TAATGAGGACAAGGGCATGT+TGG | 0.585828 | 4.2:+70127744 | None:intergenic |
| GCCGCCGTACCGTTCCGGAA+CGG | 0.585923 | 4.2:-70129303 | MS.gene75753:CDS |
| AGCACAATTAACTCAGGCGG+TGG | 0.587016 | 4.2:+70126913 | None:intergenic |
| ACAGACCGTACAGGGTTATG+AGG | 0.592256 | 4.2:+70127703 | None:intergenic |
| AGGTCTTTGATATGCTGCAT+TGG | 0.594618 | 4.2:+70128366 | None:intergenic |
| GCGAGGAACAGAAGAATGGA+AGG | 0.594898 | 4.2:-70126668 | MS.gene75753:CDS |
| ACTCAGGCGGTGGTGATGGG+TGG | 0.596918 | 4.2:+70126923 | None:intergenic |
| AACACCGTTCCGGAACGGTA+CGG | 0.598556 | 4.2:+70129299 | None:intergenic |
| TTGCTTCATGCAATTGCCAG+AGG | 0.599692 | 4.2:-70127859 | MS.gene75753:CDS |
| TGGCTTAGCACGATTCCGAA+TGG | 0.602115 | 4.2:-70126692 | MS.gene75753:CDS |
| CATTCATGGTATGGTAATTG+GGG | 0.608012 | 4.2:-70127835 | MS.gene75753:CDS |
| CTCTTACATACAAACTTGGA+AGG | 0.608157 | 4.2:+70126532 | None:intergenic |
| GGGTCTTTCGTTCATAACCA+TGG | 0.609508 | 4.2:+70129413 | None:intergenic |
| TCAACATTAGTAGCATTCAA+AGG | 0.612275 | 4.2:+70126889 | None:intergenic |
| CTGGAATTGACAGTGCTGAT+GGG | 0.613480 | 4.2:-70126558 | MS.gene75753:CDS |
| ACTCTTAATGGAAAAGAAGG+TGG | 0.616492 | 4.2:-70128088 | MS.gene75753:CDS |
| ATGAGGCCAAATGGGTGACA+AGG | 0.617957 | 4.2:-70127453 | MS.gene75753:CDS |
| AAAGGCAGCACAATTAACTC+AGG | 0.618250 | 4.2:+70126907 | None:intergenic |
| CAAACTCTTAAAGGGGCAGT+GGG | 0.620060 | 4.2:-70127430 | MS.gene75753:CDS |
| GAGGACCTCATAACCCTGTA+CGG | 0.620098 | 4.2:-70127708 | MS.gene75753:CDS |
| GCTGGAATTGACAGTGCTGA+TGG | 0.620926 | 4.2:-70126559 | MS.gene75753:CDS |
| TGCATCAAGTGCCTGTAATG+AGG | 0.624858 | 4.2:-70127470 | MS.gene75753:CDS |
| GGTTTCTGTCTGATCATGCA+AGG | 0.626736 | 4.2:-70129272 | MS.gene75753:CDS |
| TCAGTCTTAAGCACTTGCAA+GGG | 0.628349 | 4.2:-70127375 | MS.gene75753:CDS |
| TCATTATCGTTCCAGGATCG+AGG | 0.631565 | 4.2:-70127727 | MS.gene75753:CDS |
| CTTGCTTCAGATAATTGGAG+AGG | 0.631887 | 4.2:+70128325 | None:intergenic |
| CATGAACATAATAAACTACA+GGG | 0.632491 | 4.2:+70127544 | None:intergenic |
| GCACGATTCCGAATGGAGCG+AGG | 0.632953 | 4.2:-70126685 | MS.gene75753:CDS |
| AACAACACACATCTTCTGCA+TGG | 0.642554 | 4.2:-70128145 | MS.gene75753:CDS |
| ATACCCTAAAATTCCTTCTG+GGG | 0.646521 | 4.2:-70126762 | MS.gene75753:CDS |
| ACCGTTCCGGAACGGTACGG+CGG | 0.646798 | 4.2:+70129302 | None:intergenic |
| AATTCAATAGCACTAGATGT+GGG | 0.647489 | 4.2:+70127310 | None:intergenic |
| TGATATCGCTTTCGACACAC+AGG | 0.648182 | 4.2:+70128415 | None:intergenic |
| CAAAATCGAGCAAATGACCT+CGG | 0.649705 | 4.2:-70127007 | MS.gene75753:CDS |
| GACCTATTGAATGAAGTCAC+TGG | 0.652292 | 4.2:-70126868 | MS.gene75753:CDS |
| GGCAGCACAATTAACTCAGG+CGG | 0.652831 | 4.2:+70126910 | None:intergenic |
| GACAAGGCAAACTCTTAAAG+GGG | 0.656461 | 4.2:-70127437 | MS.gene75753:CDS |
| GGTATGCAGCCAGACACCAC+AGG | 0.658046 | 4.2:+70126588 | None:intergenic |
| TGTGTTAACTCAATCCGTGT+GGG | 0.658395 | 4.2:-70126508 | MS.gene75753:CDS |
| GGCAGCAGAAATATCTCCGG+TGG | 0.668352 | 4.2:+70129332 | None:intergenic |
| ATGTGTTAACTCAATCCGTG+TGG | 0.672293 | 4.2:-70126509 | MS.gene75753:CDS |
| TGGAACGATAATGAGGACAA+GGG | 0.680396 | 4.2:+70127736 | None:intergenic |
| AAAGATTAATAGGAAAACAG+TGG | 0.680975 | 4.2:-70127079 | MS.gene75753:CDS |
| AAGCCTGGTTATCTCCCACA+CGG | 0.684838 | 4.2:+70126494 | None:intergenic |
| ATGGTTGTATCATCAACTTG+AGG | 0.693179 | 4.2:-70128170 | MS.gene75753:CDS |
| AAGAGCTGAAGGCAGCTCCG+AGG | 0.699457 | 4.2:+70126990 | None:intergenic |
| ACTGAAGTCAAGAAGCTCTG+GGG | 0.722625 | 4.2:+70127393 | None:intergenic |
| ATATTGCAGAGATGAAGCGG+TGG | 0.735388 | 4.2:-70126458 | MS.gene75753:CDS |
| ATGTTAGCATGTGATACCTG+TGG | 0.742288 | 4.2:-70126604 | MS.gene75753:CDS |
| TTGTTGAAGAGGATGTTACG+AGG | 0.760276 | 4.2:-70129137 | MS.gene75753:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAACTGTAATAT+AGG | + | chr4.2:70126874-70126893 | None:intergenic | 10.0% |
| !!! | AATATAAAAAATGTGAATTT+TGG | - | chr4.2:70129401-70129420 | MS.gene75753:CDS | 10.0% |
| !!! | TTTTTTTTCTATTTTTTTTG+GGG | - | chr4.2:70126774-70126793 | MS.gene75753:CDS | 10.0% |
| !!! | TATATTTGATCATTTTTTCA+GGG | + | chr4.2:70128707-70128726 | None:intergenic | 15.0% |
| !!! | TTTTTTATATTACAACTAAC+AGG | + | chr4.2:70129392-70129411 | None:intergenic | 15.0% |
| !!! | TTTTTTTCTATTTTTTTTGG+GGG | - | chr4.2:70126775-70126794 | MS.gene75753:CDS | 15.0% |
| !! | AATATAGACCAAAGATTAAT+AGG | - | chr4.2:70128721-70128740 | MS.gene75753:intron | 20.0% |
| !!! | ATTGTGCTATAAATTTTTAC+AGG | - | chr4.2:70127880-70127899 | MS.gene75753:CDS | 20.0% |
| !!! | CTATATTTGATCATTTTTTC+AGG | + | chr4.2:70128708-70128727 | None:intergenic | 20.0% |
| !!! | CTGTTTTTTATTGATATTGT+AGG | - | chr4.2:70127543-70127562 | MS.gene75753:CDS | 20.0% |
| !!! | TTGTTGATTGAAAAAAACAA+AGG | - | chr4.2:70127359-70127378 | MS.gene75753:CDS | 20.0% |
| !!! | TTTCAAATTTGCTGTAATTT+AGG | - | chr4.2:70127066-70127085 | MS.gene75753:CDS | 20.0% |
| !!! | TTTTTTCTATTTTTTTTGGG+GGG | - | chr4.2:70126776-70126795 | MS.gene75753:CDS | 20.0% |
| !!! | TTTTTTTTTTCAAACTACGT+AGG | - | chr4.2:70126885-70126904 | MS.gene75753:CDS | 20.0% |
| ! | AAAGATTAATAGGAAAACAG+TGG | - | chr4.2:70128731-70128750 | MS.gene75753:intron | 25.0% |
| ! | ATCAATAAAAAACAGTGTCA+AGG | + | chr4.2:70127538-70127557 | None:intergenic | 25.0% |
| ! | CATGAACATAATAAACTACA+GGG | + | chr4.2:70128269-70128288 | None:intergenic | 25.0% |
| ! | GATTATATAAAACATCAGCT+GGG | + | chr4.2:70128577-70128596 | None:intergenic | 25.0% |
| ! | TGATTGAAAAAAACAAAGGA+TGG | - | chr4.2:70127363-70127382 | MS.gene75753:CDS | 25.0% |
| ! | TTATATAATCCTTGACAGAT+TGG | - | chr4.2:70128587-70128606 | MS.gene75753:intron | 25.0% |
| !! | ACTGTTTTCCTATTAATCTT+TGG | + | chr4.2:70128732-70128751 | None:intergenic | 25.0% |
| !! | TATGATAATGATGTTGATGT+TGG | - | chr4.2:70127262-70127281 | MS.gene75753:intron | 25.0% |
| !! | TGCTATAAATTTTTACAGGA+AGG | - | chr4.2:70127884-70127903 | MS.gene75753:CDS | 25.0% |
| !!! | AGGTAGCAATTTCATTTTTT+TGG | - | chr4.2:70127506-70127525 | MS.gene75753:CDS | 25.0% |
| AATTCAATAGCACTAGATGT+GGG | + | chr4.2:70128503-70128522 | None:intergenic | 30.0% | |
| ACATCTCTTACATACAAACT+TGG | + | chr4.2:70129285-70129304 | None:intergenic | 30.0% | |
| AGCGATATCACTTCATAATA+AGG | - | chr4.2:70127408-70127427 | MS.gene75753:CDS | 30.0% | |
| ATAAAAAACAGTGTCAAGGT+TGG | + | chr4.2:70127534-70127553 | None:intergenic | 30.0% | |
| ATATTGTAGGATTGAAAGTG+TGG | - | chr4.2:70127556-70127575 | MS.gene75753:CDS | 30.0% | |
| ATCTGATATTATGGGTTTCT+GGG | - | chr4.2:70127763-70127782 | MS.gene75753:CDS | 30.0% | |
| ATCTTCAAAGTTAACCACTA+TGG | + | chr4.2:70127158-70127177 | None:intergenic | 30.0% | |
| ATGGATTTGTCCAAGAAATT+TGG | - | chr4.2:70127915-70127934 | MS.gene75753:intron | 30.0% | |
| CCATGAACATAATAAACTAC+AGG | + | chr4.2:70128270-70128289 | None:intergenic | 30.0% | |
| CCTGTAGTTTATTATGTTCA+TGG | - | chr4.2:70128267-70128286 | MS.gene75753:intron | 30.0% | |
| CTTACTCTTAATGGAAAAGA+AGG | - | chr4.2:70127719-70127738 | MS.gene75753:CDS | 30.0% | |
| GGATTATATAAAACATCAGC+TGG | + | chr4.2:70128578-70128597 | None:intergenic | 30.0% | |
| GTAATTGGGGTTATGAATTT+GGG | - | chr4.2:70127988-70128007 | MS.gene75753:intron | 30.0% | |
| TAAAAAACAGTGTCAAGGTT+GGG | + | chr4.2:70127533-70127552 | None:intergenic | 30.0% | |
| TAGAACCAATTCCAACAAAA+AGG | + | chr4.2:70128192-70128211 | None:intergenic | 30.0% | |
| TATACCCTAAAATTCCTTCT+GGG | - | chr4.2:70129047-70129066 | MS.gene75753:intron | 30.0% | |
| TATTTCTCTTTACCAGTCTT+TGG | - | chr4.2:70128130-70128149 | MS.gene75753:CDS | 30.0% | |
| TCAACATTAGTAGCATTCAA+AGG | + | chr4.2:70128924-70128943 | None:intergenic | 30.0% | |
| TGACTGTAAGCAATTTATGA+AGG | - | chr4.2:70128776-70128795 | MS.gene75753:intron | 30.0% | |
| TGAGAGAAAATCGTAAAGAT+CGG | + | chr4.2:70126451-70126470 | None:intergenic | 30.0% | |
| TGGATTTGTCCAAGAAATTT+GGG | - | chr4.2:70127916-70127935 | MS.gene75753:intron | 30.0% | |
| TTGAATTCAGGTAAGAGTAA+TGG | - | chr4.2:70128516-70128535 | MS.gene75753:intron | 30.0% | |
| ! | ATGTGTTTAATTTACAAGCC+TGG | + | chr4.2:70129334-70129353 | None:intergenic | 30.0% |
| ! | TCACATTTTGCTTCAGATTT+TGG | - | chr4.2:70127841-70127860 | MS.gene75753:CDS | 30.0% |
| !!! | TTTATTTTGATGTACACACC+TGG | - | chr4.2:70126826-70126845 | MS.gene75753:CDS | 30.0% |
| AATGATGTTGATGTTGGTGT+GGG | - | chr4.2:70127268-70127287 | MS.gene75753:intron | 35.0% | |
| AATGGTACAGTTGAAGTTCA+AGG | - | chr4.2:70129077-70129096 | MS.gene75753:intron | 35.0% | |
| ACATAATAAACTACAGGGAG+TGG | + | chr4.2:70128264-70128283 | None:intergenic | 35.0% | |
| ACCATATCCTAGAAGTTTCA+CGG | + | chr4.2:70129009-70129028 | None:intergenic | 35.0% | |
| ACTCTTAATGGAAAAGAAGG+TGG | - | chr4.2:70127722-70127741 | MS.gene75753:CDS | 35.0% | |
| ATAATCCAGCCCAAATTTCT+TGG | + | chr4.2:70127928-70127947 | None:intergenic | 35.0% | |
| ATACCCTAAAATTCCTTCTG+GGG | - | chr4.2:70129048-70129067 | MS.gene75753:intron | 35.0% | |
| ATCAGAAATCACTTGCTCTT+TGG | + | chr4.2:70128655-70128674 | None:intergenic | 35.0% | |
| ATGGTTGTATCATCAACTTG+AGG | - | chr4.2:70127640-70127659 | MS.gene75753:CDS | 35.0% | |
| CAAAGTTAACCACTATGGTT+TGG | + | chr4.2:70127153-70127172 | None:intergenic | 35.0% | |
| CATTCATGGTATGGTAATTG+GGG | - | chr4.2:70127975-70127994 | MS.gene75753:intron | 35.0% | |
| CTCTCTGGATCTGATATTAT+GGG | - | chr4.2:70127755-70127774 | MS.gene75753:CDS | 35.0% | |
| CTCTTACATACAAACTTGGA+AGG | + | chr4.2:70129281-70129300 | None:intergenic | 35.0% | |
| GAAATCAGTTGCAAATGGAA+TGG | - | chr4.2:70128457-70128476 | MS.gene75753:intron | 35.0% | |
| GAATTCAATAGCACTAGATG+TGG | + | chr4.2:70128504-70128523 | None:intergenic | 35.0% | |
| GATCTGATATTATGGGTTTC+TGG | - | chr4.2:70127762-70127781 | MS.gene75753:CDS | 35.0% | |
| GCAATAGAGCTTAATCCATT+AGG | + | chr4.2:70128621-70128640 | None:intergenic | 35.0% | |
| GCATTCATGGTATGGTAATT+GGG | - | chr4.2:70127974-70127993 | MS.gene75753:intron | 35.0% | |
| GGTAATTGGGGTTATGAATT+TGG | - | chr4.2:70127987-70128006 | MS.gene75753:intron | 35.0% | |
| GTATACCCTAAAATTCCTTC+TGG | - | chr4.2:70129046-70129065 | MS.gene75753:intron | 35.0% | |
| GTTGTACATGCTAATGGTTA+TGG | - | chr4.2:70127689-70127708 | MS.gene75753:CDS | 35.0% | |
| TAATGATGTTGATGTTGGTG+TGG | - | chr4.2:70127267-70127286 | MS.gene75753:intron | 35.0% | |
| TACCGAAGATGCATACAAAA+TGG | - | chr4.2:70128028-70128047 | MS.gene75753:CDS | 35.0% | |
| TACTCTTGACATTGTTGAAG+AGG | - | chr4.2:70126662-70126681 | MS.gene75753:CDS | 35.0% | |
| TCTCTCTGGATCTGATATTA+TGG | - | chr4.2:70127754-70127773 | MS.gene75753:CDS | 35.0% | |
| TGACAAGGCAAACTCTTAAA+GGG | - | chr4.2:70128372-70128391 | MS.gene75753:CDS | 35.0% | |
| TTGAACTTCAACTGTACCAT+TGG | + | chr4.2:70129078-70129097 | None:intergenic | 35.0% | |
| ! | AGATCTCTTCTCCTTTTTGT+TGG | - | chr4.2:70128178-70128197 | MS.gene75753:CDS | 35.0% |
| ! | CATCTAGTGCTATTGAATTC+AGG | - | chr4.2:70128504-70128523 | MS.gene75753:intron | 35.0% |
| ! | CTTCTCCTTTTTGTTGGAAT+TGG | - | chr4.2:70128184-70128203 | MS.gene75753:CDS | 35.0% |
| ! | TTCTAAATTTTCGTAAGCCC+AGG | - | chr4.2:70128207-70128226 | MS.gene75753:CDS | 35.0% |
| !! | ATATTATGGGTTTCTGGGAT+AGG | - | chr4.2:70127768-70127787 | MS.gene75753:CDS | 35.0% |
| !! | GTGTGGTTTGATATTTTTGC+AGG | - | chr4.2:70127573-70127592 | MS.gene75753:CDS | 35.0% |
| !!! | TGCCATTTTGTATGCATCTT+CGG | + | chr4.2:70128033-70128052 | None:intergenic | 35.0% |
| !!! | TTTCTATTTTTTTTGGGGGG+AGG | - | chr4.2:70126779-70126798 | MS.gene75753:CDS | 35.0% |
| AAAGCATATACAGTAGAGCC+AGG | + | chr4.2:70126847-70126866 | None:intergenic | 40.0% | |
| AAAGGCAGCACAATTAACTC+AGG | + | chr4.2:70128906-70128925 | None:intergenic | 40.0% | |
| AAAGTCAGACCAAACCATAG+TGG | - | chr4.2:70127141-70127160 | MS.gene75753:CDS | 40.0% | |
| AACAACACACATCTTCTGCA+TGG | - | chr4.2:70127665-70127684 | MS.gene75753:CDS | 40.0% | |
| AGAGAAATAACAGACCGTAC+AGG | + | chr4.2:70128119-70128138 | None:intergenic | 40.0% | |
| AGGTCTTTGATATGCTGCAT+TGG | + | chr4.2:70127447-70127466 | None:intergenic | 40.0% | |
| ATGTGTTAACTCAATCCGTG+TGG | - | chr4.2:70129301-70129320 | MS.gene75753:CDS | 40.0% | |
| ATGTTAGCATGTGATACCTG+TGG | - | chr4.2:70129206-70129225 | MS.gene75753:CDS | 40.0% | |
| CAAAATCGAGCAAATGACCT+CGG | - | chr4.2:70128803-70128822 | MS.gene75753:intron | 40.0% | |
| CAAAGACCTTGCACTAAATG+TGG | - | chr4.2:70127458-70127477 | MS.gene75753:CDS | 40.0% | |
| CAAGGGAAATCAGTTGCAAA+TGG | - | chr4.2:70128452-70128471 | MS.gene75753:intron | 40.0% | |
| CACATATTGCAGAGATGAAG+CGG | - | chr4.2:70129349-70129368 | MS.gene75753:CDS | 40.0% | |
| CACCAGTGACTTCATTCAAT+AGG | + | chr4.2:70128947-70128966 | None:intergenic | 40.0% | |
| CATTTCTGCTGATGATCTTG+AGG | - | chr4.2:70127616-70127635 | MS.gene75753:CDS | 40.0% | |
| CTTACAGTCAAGAAGCTTTC+TGG | + | chr4.2:70128766-70128785 | None:intergenic | 40.0% | |
| CTTGCTTCAGATAATTGGAG+AGG | + | chr4.2:70127488-70127507 | None:intergenic | 40.0% | |
| GAAATCACTTGCTCTTTGGA+AGG | + | chr4.2:70128651-70128670 | None:intergenic | 40.0% | |
| GAATCGTTGAGTCAGATTCT+CGG | - | chr4.2:70126740-70126759 | MS.gene75753:CDS | 40.0% | |
| GACAAGGCAAACTCTTAAAG+GGG | - | chr4.2:70128373-70128392 | MS.gene75753:CDS | 40.0% | |
| GACCTATTGAATGAAGTCAC+TGG | - | chr4.2:70128942-70128961 | MS.gene75753:intron | 40.0% | |
| GAGAAATAACAGACCGTACA+GGG | + | chr4.2:70128118-70128137 | None:intergenic | 40.0% | |
| GCTACCTTGCTTCAGATAAT+TGG | + | chr4.2:70127493-70127512 | None:intergenic | 40.0% | |
| GGCATTCATGGTATGGTAAT+TGG | - | chr4.2:70127973-70127992 | MS.gene75753:intron | 40.0% | |
| GGTCACTTGCTTACTCTTAA+TGG | - | chr4.2:70127710-70127729 | MS.gene75753:CDS | 40.0% | |
| GTGACAAGGCAAACTCTTAA+AGG | - | chr4.2:70128371-70128390 | MS.gene75753:CDS | 40.0% | |
| TCAGTCTTAAGCACTTGCAA+GGG | - | chr4.2:70128435-70128454 | MS.gene75753:intron | 40.0% | |
| TGGAACGATAATGAGGACAA+GGG | + | chr4.2:70128077-70128096 | None:intergenic | 40.0% | |
| TGTGATCAATGTCGTGTTGT+TGG | - | chr4.2:70126711-70126730 | MS.gene75753:CDS | 40.0% | |
| TGTGTTAACTCAATCCGTGT+GGG | - | chr4.2:70129302-70129321 | MS.gene75753:CDS | 40.0% | |
| TTACAGGAAGGTTACTGTGA+TGG | - | chr4.2:70127896-70127915 | MS.gene75753:CDS | 40.0% | |
| TTAGGGTATACACACGATCT+CGG | + | chr4.2:70129037-70129056 | None:intergenic | 40.0% | |
| TTCAGTCTTAAGCACTTGCA+AGG | - | chr4.2:70128434-70128453 | MS.gene75753:intron | 40.0% | |
| TTGTTGAAGAGGATGTTACG+AGG | - | chr4.2:70126673-70126692 | MS.gene75753:CDS | 40.0% | |
| TTTGTAGCCGTGAAACTTCT+AGG | - | chr4.2:70128999-70129018 | MS.gene75753:intron | 40.0% | |
| TTTGTCCAAGAAATTTGGGC+TGG | - | chr4.2:70127920-70127939 | MS.gene75753:intron | 40.0% | |
| ! | CTCTCCAATTATCTGAAGCA+AGG | - | chr4.2:70127486-70127505 | MS.gene75753:CDS | 40.0% |
| ! | TGACCCCAGAAGGAATTTTA+GGG | + | chr4.2:70129054-70129073 | None:intergenic | 40.0% |
| ! | TTGACCCCAGAAGGAATTTT+AGG | + | chr4.2:70129055-70129074 | None:intergenic | 40.0% |
| ! | TTTGTGCAGCTTTGTCTGTT+AGG | - | chr4.2:70127792-70127811 | MS.gene75753:CDS | 40.0% |
| !! | CATGGTGTTGTACATGCTAA+TGG | - | chr4.2:70127683-70127702 | MS.gene75753:CDS | 40.0% |
| !! | CTAAGGATGATGATGGAGAA+AGG | - | chr4.2:70129183-70129202 | MS.gene75753:CDS | 40.0% |
| !! | CTTCTTTTGACTCGCTTAGT+GGG | + | chr4.2:70126420-70126439 | None:intergenic | 40.0% |
| !! | GGTTGGTGGATATGGAATTA+TGG | - | chr4.2:70127307-70127326 | MS.gene75753:CDS | 40.0% |
| !! | TCTTCTTTTGACTCGCTTAG+TGG | + | chr4.2:70126421-70126440 | None:intergenic | 40.0% |
| !!! | AGTCACTGGTGTTTTTCAAG+AGG | - | chr4.2:70128956-70128975 | MS.gene75753:intron | 40.0% |
| !!! | GTGCTAAGCCATTTTTAGCT+GGG | + | chr4.2:70129109-70129128 | None:intergenic | 40.0% |
| ACTGAAGTCAAGAAGCTCTG+GGG | + | chr4.2:70128420-70128439 | None:intergenic | 45.0% | |
| ACTGTCAATTCCAGCACATC+TGG | + | chr4.2:70129246-70129265 | None:intergenic | 45.0% | |
| AGACTGAAGTCAAGAAGCTC+TGG | + | chr4.2:70128422-70128441 | None:intergenic | 45.0% | |
| AGGTGATGTTTCGTCTGGTT+TGG | - | chr4.2:70126638-70126657 | MS.gene75753:CDS | 45.0% | |
| AGTTTGCCTTGTCACCCATT+TGG | + | chr4.2:70128366-70128385 | None:intergenic | 45.0% | |
| ATATTGCAGAGATGAAGCGG+TGG | - | chr4.2:70129352-70129371 | MS.gene75753:CDS | 45.0% | |
| CAAACTCTTAAAGGGGCAGT+GGG | - | chr4.2:70128380-70128399 | MS.gene75753:CDS | 45.0% | |
| CACCAGATCTTAAGAGCTGA+AGG | + | chr4.2:70128834-70128853 | None:intergenic | 45.0% | |
| CAGAAATATCTCCGGTGGTT+GGG | + | chr4.2:70126476-70126495 | None:intergenic | 45.0% | |
| CTGCTGATGATCTTGAGGAA+TGG | - | chr4.2:70127621-70127640 | MS.gene75753:CDS | 45.0% | |
| CTGGAACGATAATGAGGACA+AGG | + | chr4.2:70128078-70128097 | None:intergenic | 45.0% | |
| CTTGTCCTCATTATCGTTCC+AGG | - | chr4.2:70128076-70128095 | MS.gene75753:CDS | 45.0% | |
| GAAACCTGTAAACACCGTTC+CGG | + | chr4.2:70126524-70126543 | None:intergenic | 45.0% | |
| GACTGAAGTCAAGAAGCTCT+GGG | + | chr4.2:70128421-70128440 | None:intergenic | 45.0% | |
| GAGTCAGATTCTCGGTTCTT+AGG | - | chr4.2:70126748-70126767 | MS.gene75753:CDS | 45.0% | |
| GATCATGTGATGTGGTTGGT+TGG | - | chr4.2:70127290-70127309 | MS.gene75753:intron | 45.0% | |
| GGAGAATGCCCAGCTAAAAA+TGG | - | chr4.2:70129098-70129117 | MS.gene75753:intron | 45.0% | |
| GGAGTTCCACATTTAGTGCA+AGG | + | chr4.2:70127467-70127486 | None:intergenic | 45.0% | |
| GGTTTCTGTCTGATCATGCA+AGG | - | chr4.2:70126538-70126557 | MS.gene75753:CDS | 45.0% | |
| GTTCAGTTTCAGCCAAAGAC+TGG | + | chr4.2:70128145-70128164 | None:intergenic | 45.0% | |
| TAGGGTATACACACGATCTC+GGG | + | chr4.2:70129036-70129055 | None:intergenic | 45.0% | |
| TCATTATCGTTCCAGGATCG+AGG | - | chr4.2:70128083-70128102 | MS.gene75753:CDS | 45.0% | |
| TCGATCCTGGAACGATAATG+AGG | + | chr4.2:70128084-70128103 | None:intergenic | 45.0% | |
| TGACTGCATTTGCGGTACTA+AGG | - | chr4.2:70129166-70129185 | MS.gene75753:CDS | 45.0% | |
| TGATATCGCTTTCGACACAC+AGG | + | chr4.2:70127398-70127417 | None:intergenic | 45.0% | |
| TGCATCAAGTGCCTGTAATG+AGG | - | chr4.2:70128340-70128359 | MS.gene75753:CDS | 45.0% | |
| TGCCTGTAATGAGGCCAAAT+GGG | - | chr4.2:70128349-70128368 | MS.gene75753:CDS | 45.0% | |
| TGCCTTCAGCTCTTAAGATC+TGG | - | chr4.2:70128829-70128848 | MS.gene75753:intron | 45.0% | |
| TGCGGTACTAAGGATGATGA+TGG | - | chr4.2:70129176-70129195 | MS.gene75753:CDS | 45.0% | |
| TGCTTCATGCAATTGCCAGA+GGG | - | chr4.2:70127952-70127971 | MS.gene75753:intron | 45.0% | |
| TGGAAGGTTGACTGCATTTG+CGG | - | chr4.2:70129158-70129177 | MS.gene75753:CDS | 45.0% | |
| TTGCTTCATGCAATTGCCAG+AGG | - | chr4.2:70127951-70127970 | MS.gene75753:intron | 45.0% | |
| TTGTTTCGTGTTGGAGAGGT+TGG | - | chr4.2:70126609-70126628 | MS.gene75753:CDS | 45.0% | |
| TTTCTCTCATTCCCAACCAC+CGG | - | chr4.2:70126462-70126481 | MS.gene75753:CDS | 45.0% | |
| ! | AGATTGGCTCATGTGCCTAA+TGG | - | chr4.2:70128603-70128622 | MS.gene75753:intron | 45.0% |
| ! | ATGGGTGGTCTTCTTTAGGA+TGG | + | chr4.2:70128875-70128894 | None:intergenic | 45.0% |
| ! | GATCTTGTTTCGTGTTGGAG+AGG | - | chr4.2:70126605-70126624 | MS.gene75753:CDS | 45.0% |
| ! | TAATGAGGACAAGGGCATGT+TGG | + | chr4.2:70128069-70128088 | None:intergenic | 45.0% |
| ! | TCACTTGCTCTTTGGAAGGA+TGG | + | chr4.2:70128647-70128666 | None:intergenic | 45.0% |
| ! | TGGCAGATCTTGTTTCGTGT+TGG | - | chr4.2:70126600-70126619 | MS.gene75753:CDS | 45.0% |
| ! | TGGGGTTATGAATTTGGGAC+TGG | - | chr4.2:70127993-70128012 | MS.gene75753:intron | 45.0% |
| !! | ATGTGGTTGGTTGGTGGATA+TGG | - | chr4.2:70127299-70127318 | MS.gene75753:intron | 45.0% |
| !! | CTGGAATTGACAGTGCTGAT+GGG | - | chr4.2:70129252-70129271 | MS.gene75753:CDS | 45.0% |
| !! | GCCGTGAAACTTCTAGGATA+TGG | - | chr4.2:70129005-70129024 | MS.gene75753:intron | 45.0% |
| !!! | CGTGCTAAGCCATTTTTAGC+TGG | + | chr4.2:70129110-70129129 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTCTATTTTTTTT+GGG | - | chr4.2:70126773-70126792 | MS.gene75753:CDS | 5.0% |
| !!! | TTTTTTTTTTCTATTTTTTT+TGG | - | chr4.2:70126772-70126791 | MS.gene75753:CDS | 5.0% |
| AAGAGGATGTTACGAGGTCG+AGG | - | chr4.2:70126679-70126698 | MS.gene75753:CDS | 50.0% | |
| AAGCCTGGTTATCTCCCACA+CGG | + | chr4.2:70129319-70129338 | None:intergenic | 50.0% | |
| AATCCGTGTGGGAGATAACC+AGG | - | chr4.2:70129313-70129332 | MS.gene75753:CDS | 50.0% | |
| ACAGACCGTACAGGGTTATG+AGG | + | chr4.2:70128110-70128129 | None:intergenic | 50.0% | |
| ACCATACCATGAATGCCCTC+TGG | + | chr4.2:70127970-70127989 | None:intergenic | 50.0% | |
| AGCACAATTAACTCAGGCGG+TGG | + | chr4.2:70128900-70128919 | None:intergenic | 50.0% | |
| AGCGGCAGCAGAAATATCTC+CGG | + | chr4.2:70126484-70126503 | None:intergenic | 50.0% | |
| ATCAGCGACGGAAAAAGCTC+AGG | + | chr4.2:70126576-70126595 | None:intergenic | 50.0% | |
| ATGAGGCCAAATGGGTGACA+AGG | - | chr4.2:70128357-70128376 | MS.gene75753:CDS | 50.0% | |
| ATTAACTCAGGCGGTGGTGA+TGG | + | chr4.2:70128894-70128913 | None:intergenic | 50.0% | |
| CACCCATTTGGCCTCATTAC+AGG | + | chr4.2:70128354-70128373 | None:intergenic | 50.0% | |
| CATGTGATACCTGTGGTGTC+TGG | - | chr4.2:70129213-70129232 | MS.gene75753:CDS | 50.0% | |
| CGATGTTGAAGATGTGCAGC+AGG | - | chr4.2:70128298-70128317 | MS.gene75753:intron | 50.0% | |
| CTGTAAACACCGTTCCGGAA+CGG | + | chr4.2:70126519-70126538 | None:intergenic | 50.0% | |
| CTTCTGTTCCTCGCTCCATT+CGG | + | chr4.2:70129136-70129155 | None:intergenic | 50.0% | |
| GAGGACCTCATAACCCTGTA+CGG | - | chr4.2:70128102-70128121 | MS.gene75753:CDS | 50.0% | |
| GATGGAGGTGATGTTTCGTC+TGG | - | chr4.2:70126633-70126652 | MS.gene75753:CDS | 50.0% | |
| GCAAACTCTTAAAGGGGCAG+TGG | - | chr4.2:70128379-70128398 | MS.gene75753:CDS | 50.0% | |
| GCACATGAGCCAATCTGTCA+AGG | + | chr4.2:70128599-70128618 | None:intergenic | 50.0% | |
| GCAGAAATATCTCCGGTGGT+TGG | + | chr4.2:70126477-70126496 | None:intergenic | 50.0% | |
| GCGAGGAACAGAAGAATGGA+AGG | - | chr4.2:70129142-70129161 | MS.gene75753:CDS | 50.0% | |
| GGCAGCACAATTAACTCAGG+CGG | + | chr4.2:70128903-70128922 | None:intergenic | 50.0% | |
| GTGCCTGTAATGAGGCCAAA+TGG | - | chr4.2:70128348-70128367 | MS.gene75753:CDS | 50.0% | |
| GTGGGATCATGTGATGTGGT+TGG | - | chr4.2:70127286-70127305 | MS.gene75753:intron | 50.0% | |
| TGGAGCGAGGAACAGAAGAA+TGG | - | chr4.2:70129138-70129157 | MS.gene75753:CDS | 50.0% | |
| TGGCTTAGCACGATTCCGAA+TGG | - | chr4.2:70129118-70129137 | MS.gene75753:CDS | 50.0% | |
| TGGTGTGGGATCATGTGATG+TGG | - | chr4.2:70127282-70127301 | MS.gene75753:intron | 50.0% | |
| TTAACTCAGGCGGTGGTGAT+GGG | + | chr4.2:70128893-70128912 | None:intergenic | 50.0% | |
| TTAGCAGTCTCTGCACTCCT+GGG | + | chr4.2:70128227-70128246 | None:intergenic | 50.0% | |
| TTTAGCAGTCTCTGCACTCC+TGG | + | chr4.2:70128228-70128247 | None:intergenic | 50.0% | |
| ! | CATGTGATGTGGTTGGTTGG+TGG | - | chr4.2:70127293-70127312 | MS.gene75753:intron | 50.0% |
| ! | GCTGGAATTGACAGTGCTGA+TGG | - | chr4.2:70129251-70129270 | MS.gene75753:CDS | 50.0% |
| ! | TACCATTGGTTGACCCCAGA+AGG | + | chr4.2:70129064-70129083 | None:intergenic | 50.0% |
| ! | TGTGCAGCAGGCTTTGATCA+AGG | - | chr4.2:70128310-70128329 | MS.gene75753:intron | 50.0% |
| !! | CAATTGCCAGAGGGCATTCA+TGG | - | chr4.2:70127961-70127980 | MS.gene75753:intron | 50.0% |
| !! | GGTGATGGGTGGTCTTCTTT+AGG | + | chr4.2:70128879-70128898 | None:intergenic | 50.0% |
| !! | TTCCTTCTGGGGTCAACCAA+TGG | - | chr4.2:70129059-70129078 | MS.gene75753:intron | 50.0% |
| !! | TTTTTCCGTCGCTGATGACG+TGG | - | chr4.2:70126580-70126599 | MS.gene75753:CDS | 50.0% |
| AACACCGTTCCGGAACGGTA+CGG | + | chr4.2:70126514-70126533 | None:intergenic | 55.0% | |
| AGCGACGGAAAAAGCTCAGG+AGG | + | chr4.2:70126573-70126592 | None:intergenic | 55.0% | |
| ATCTGCCACGTCATCAGCGA+CGG | + | chr4.2:70126588-70126607 | None:intergenic | 55.0% | |
| CGTTCCGGAACGGTGTTTAC+AGG | - | chr4.2:70126517-70126536 | MS.gene75753:CDS | 55.0% | |
| CTCTTAAAGGGGCAGTGGGT+AGG | - | chr4.2:70128384-70128403 | MS.gene75753:CDS | 55.0% | |
| GGCAGCAGAAATATCTCCGG+TGG | + | chr4.2:70126481-70126500 | None:intergenic | 55.0% | |
| GGTTATGAGGTCCTCGATCC+TGG | + | chr4.2:70128097-70128116 | None:intergenic | 55.0% | |
| TGGCTGCATACCAGATGTGC+TGG | - | chr4.2:70129233-70129252 | MS.gene75753:CDS | 55.0% | |
| !! | CGTGTTGGAGAGGTTGGTGA+TGG | - | chr4.2:70126615-70126634 | MS.gene75753:CDS | 55.0% |
| !! | GCCAGAGGGCATTCATGGTA+TGG | - | chr4.2:70127966-70127985 | MS.gene75753:intron | 55.0% |
| !! | GTTGGAGAGGTTGGTGATGG+AGG | - | chr4.2:70126618-70126637 | MS.gene75753:CDS | 55.0% |
| AAGAGCTGAAGGCAGCTCCG+AGG | + | chr4.2:70128823-70128842 | None:intergenic | 60.0% | |
| GCACGATTCCGAATGGAGCG+AGG | - | chr4.2:70129125-70129144 | MS.gene75753:CDS | 60.0% | |
| GGTATGCAGCCAGACACCAC+AGG | + | chr4.2:70129225-70129244 | None:intergenic | 60.0% | |
| ACCGTTCCGGAACGGTACGG+CGG | + | chr4.2:70126511-70126530 | None:intergenic | 65.0% | |
| CTTCTGCCGCCGTACCGTTC+CGG | - | chr4.2:70126502-70126521 | MS.gene75753:CDS | 65.0% | |
| GAACGGTACGGCGGCAGAAG+CGG | + | chr4.2:70126502-70126521 | None:intergenic | 65.0% | |
| GGGGCAGTGGGTAGGCGTAT+TGG | - | chr4.2:70128392-70128411 | MS.gene75753:CDS | 65.0% | |
| GGTGGCTCGTCGCTTCTCTC+TGG | - | chr4.2:70127740-70127759 | MS.gene75753:CDS | 65.0% | |
| !! | ACTCAGGCGGTGGTGATGGG+TGG | + | chr4.2:70128890-70128909 | None:intergenic | 65.0% |
| GCCGCCGTACCGTTCCGGAA+CGG | - | chr4.2:70126507-70126526 | MS.gene75753:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 70126399 | 70129433 | 70126399 | ID=MS.gene75753 |
| chr4.2 | mRNA | 70126399 | 70129433 | 70126399 | ID=MS.gene75753.t1;Parent=MS.gene75753 |
| chr4.2 | exon | 70129100 | 70129433 | 70129100 | ID=MS.gene75753.t1.exon1;Parent=MS.gene75753.t1 |
| chr4.2 | CDS | 70129100 | 70129433 | 70129100 | ID=cds.MS.gene75753.t1;Parent=MS.gene75753.t1 |
| chr4.2 | exon | 70128325 | 70128451 | 70128325 | ID=MS.gene75753.t1.exon2;Parent=MS.gene75753.t1 |
| chr4.2 | CDS | 70128325 | 70128451 | 70128325 | ID=cds.MS.gene75753.t1;Parent=MS.gene75753.t1 |
| chr4.2 | exon | 70128019 | 70128237 | 70128019 | ID=MS.gene75753.t1.exon3;Parent=MS.gene75753.t1 |
| chr4.2 | CDS | 70128019 | 70128237 | 70128019 | ID=cds.MS.gene75753.t1;Parent=MS.gene75753.t1 |
| chr4.2 | exon | 70127307 | 70127930 | 70127307 | ID=MS.gene75753.t1.exon4;Parent=MS.gene75753.t1 |
| chr4.2 | CDS | 70127307 | 70127930 | 70127307 | ID=cds.MS.gene75753.t1;Parent=MS.gene75753.t1 |
| chr4.2 | exon | 70126399 | 70127227 | 70126399 | ID=MS.gene75753.t1.exon5;Parent=MS.gene75753.t1 |
| chr4.2 | CDS | 70126399 | 70127227 | 70126399 | ID=cds.MS.gene75753.t1;Parent=MS.gene75753.t1 |
| Gene Sequence |
| Protein sequence |
