Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75823.t1 | XP_003595580.2 | 70 | 420 | 68 | 10 | 1 | 412 | 1 | 370 | 3.60E-144 | 521.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75823.t1 | Q2HRQ4 | 70.0 | 420 | 68 | 10 | 1 | 412 | 1 | 370 | 2.6e-144 | 521.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene75823.t1 | TF | MADS-M-type |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75823.t1 | MTR_2g049630 | 74.286 | 420 | 50 | 10 | 1 | 412 | 1 | 370 | 0.0 | 564 |
MS.gene75823.t1 | MTR_2g049610 | 59.274 | 248 | 72 | 6 | 4 | 249 | 2 | 222 | 1.03e-86 | 264 |
MS.gene75823.t1 | MTR_2g049530 | 72.000 | 175 | 47 | 1 | 1 | 175 | 1 | 173 | 8.34e-85 | 258 |
MS.gene75823.t1 | MTR_4g107170 | 44.304 | 237 | 108 | 6 | 1 | 220 | 1 | 230 | 2.53e-52 | 176 |
MS.gene75823.t1 | MTR_4g045977 | 32.771 | 415 | 182 | 15 | 4 | 406 | 2 | 331 | 3.23e-43 | 156 |
MS.gene75823.t1 | MTR_1g115290 | 46.897 | 145 | 64 | 3 | 40 | 174 | 2 | 143 | 2.36e-32 | 120 |
MS.gene75823.t1 | MTR_6g018920 | 39.103 | 156 | 88 | 2 | 4 | 155 | 2 | 154 | 2.49e-30 | 120 |
MS.gene75823.t1 | MTR_1g114730 | 39.103 | 156 | 88 | 2 | 4 | 155 | 2 | 154 | 3.08e-29 | 117 |
MS.gene75823.t1 | MTR_6g005440 | 38.065 | 155 | 89 | 2 | 4 | 154 | 2 | 153 | 6.15e-29 | 115 |
MS.gene75823.t1 | MTR_6g005450 | 34.054 | 185 | 102 | 3 | 4 | 171 | 2 | 183 | 2.23e-25 | 106 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 86 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGTGAAGGTGTGGAGTTTA+AGG | 0.200238 | 2.4:-41978095 | MS.gene75823:CDS |
CAATCAGAGAAATAATAATT+TGG | 0.229669 | 2.4:-41979004 | MS.gene75823:CDS |
AGATTCAAGCTTGCAATAAA+AGG | 0.235091 | 2.4:-41978642 | MS.gene75823:CDS |
ACTTCACAAATTCACCAAAT+TGG | 0.235452 | 2.4:+41978443 | None:intergenic |
ATGAGTAACAATCCAGATTT+TGG | 0.240718 | 2.4:-41977833 | MS.gene75823:CDS |
AAGTGATGAAACTAGTTTCT+TGG | 0.301809 | 2.4:-41978593 | MS.gene75823:CDS |
CATCATGCATGCCCTCAAAT+TGG | 0.311938 | 2.4:+41978197 | None:intergenic |
TGTTGCACATCAACATGATT+AGG | 0.337979 | 2.4:+41978544 | None:intergenic |
CACAATCTCTTTGTGCACTT+TGG | 0.338528 | 2.4:+41978750 | None:intergenic |
TTGTCAGTACGGCCAAAATC+TGG | 0.361644 | 2.4:+41977821 | None:intergenic |
GAATGGCTTGCTAAACTTGA+TGG | 0.361953 | 2.4:-41978331 | MS.gene75823:CDS |
ACTTTCATTGGCATTCTAGA+TGG | 0.373255 | 2.4:-41978667 | MS.gene75823:CDS |
CTTGCTAAACTTGATGGAAT+TGG | 0.393389 | 2.4:-41978325 | MS.gene75823:CDS |
TTAGCAAGCCATTCTTGAAC+AGG | 0.402628 | 2.4:+41978340 | None:intergenic |
GAAACAGGAGGCAAACTAAC+AGG | 0.403384 | 2.4:+41978133 | None:intergenic |
GAACAACTCAAAACTTTCAT+TGG | 0.406346 | 2.4:-41978679 | MS.gene75823:CDS |
TTAGGTATATATTGCCTTTG+AGG | 0.412647 | 2.4:+41978562 | None:intergenic |
TTGATTGTATATGATGGTTA+TGG | 0.415733 | 2.4:-41978934 | MS.gene75823:CDS |
AATGGCTGAACCTGGAGAAT+TGG | 0.416289 | 2.4:-41978068 | MS.gene75823:CDS |
TTCAAATTCAAACCAATTTG+AGG | 0.423199 | 2.4:-41978209 | MS.gene75823:CDS |
GAATCTTGTGGCGTAGTCAT+TGG | 0.433592 | 2.4:+41978901 | None:intergenic |
ATTTGGTGAATTTGTGAAGT+TGG | 0.438819 | 2.4:-41978440 | MS.gene75823:CDS |
ACTTGATGGAATTGGTGAAA+TGG | 0.440564 | 2.4:-41978317 | MS.gene75823:CDS |
TCAAATTGGTTTGAATTTGA+AGG | 0.443439 | 2.4:+41978211 | None:intergenic |
TCAAATTCAAACCAATTTGA+GGG | 0.445030 | 2.4:-41978208 | MS.gene75823:CDS |
AGTTGGTTAGTCGACGAAAC+AGG | 0.451962 | 2.4:+41978118 | None:intergenic |
TGTGGAGTTTAAGGATCTAA+TGG | 0.457159 | 2.4:-41978086 | MS.gene75823:CDS |
TCACCATCATCTAGTTTACT+AGG | 0.464092 | 2.4:+41977992 | None:intergenic |
AAATGAAGAAGATGCAACTT+TGG | 0.464893 | 2.4:-41977864 | MS.gene75823:CDS |
AAATTCACCAAATTGGTTAG+TGG | 0.466775 | 2.4:+41978450 | None:intergenic |
CCTCCCATGTTCATGAAGCA+TGG | 0.467746 | 2.4:+41978703 | None:intergenic |
TGGGCAAACCTGTTCAAGAA+TGG | 0.474989 | 2.4:-41978348 | MS.gene75823:CDS |
GAGAATTGGCTGATCAAGAA+TGG | 0.477671 | 2.4:-41978054 | MS.gene75823:CDS |
TCTTGATCAGCCAATTCTCC+AGG | 0.485314 | 2.4:+41978058 | None:intergenic |
CAAATTGGTTTGAATTTGAA+GGG | 0.485473 | 2.4:+41978212 | None:intergenic |
ATGAAGCATGGGTGCCAAGT+TGG | 0.489072 | 2.4:+41978715 | None:intergenic |
AATTGGTTAGTGGACAAAAC+AGG | 0.495659 | 2.4:+41978460 | None:intergenic |
TGTGAAGTTGGATGATGTAA+TGG | 0.498245 | 2.4:-41978428 | MS.gene75823:CDS |
CTCCCATGTTCATGAAGCAT+GGG | 0.502859 | 2.4:+41978704 | None:intergenic |
GCACCCATGCTTCATGAACA+TGG | 0.504036 | 2.4:-41978707 | MS.gene75823:CDS |
GCAGAAATGGGTCGTGCTCG+TGG | 0.509866 | 2.4:-41979078 | None:intergenic |
TCATGTTGATGTGCAACAAA+GGG | 0.515172 | 2.4:-41978539 | MS.gene75823:CDS |
TACAAAGATCTTTGATGTGA+AGG | 0.515872 | 2.4:-41978815 | MS.gene75823:CDS |
CAATTTGAGGGCATGCATGA+TGG | 0.516426 | 2.4:-41978196 | MS.gene75823:CDS |
TATGAGCAACAAAAGATTGA+GGG | 0.532792 | 2.4:-41978850 | MS.gene75823:CDS |
GCTTGCTTGATTGTATATGA+TGG | 0.536036 | 2.4:-41978940 | MS.gene75823:CDS |
CACTTTGGAAATCTCAACTT+CGG | 0.536155 | 2.4:+41978765 | None:intergenic |
GACTTCAAAGGATCATAGAT+AGG | 0.536260 | 2.4:+41978157 | None:intergenic |
ATATGAGCAACAAAAGATTG+AGG | 0.539428 | 2.4:-41978851 | MS.gene75823:CDS |
TGAAGAAGATGCAACTTTGG+AGG | 0.540963 | 2.4:-41977861 | MS.gene75823:CDS |
ACTCCACACCTTCACCAAGT+TGG | 0.544036 | 2.4:+41978101 | None:intergenic |
AGAGAATGGACTGGTCAACT+TGG | 0.545153 | 2.4:-41978397 | MS.gene75823:CDS |
CACTGCTCACACACAACGCA+TGG | 0.545176 | 2.4:-41978242 | MS.gene75823:CDS |
TAATGGCTGAACCTAGAGAA+TGG | 0.545403 | 2.4:-41978411 | MS.gene75823:CDS |
TTCATCGCCTTCATCTTGAC+TGG | 0.549323 | 2.4:+41977949 | None:intergenic |
AGTTGACCAGTCCATTCTCT+AGG | 0.550305 | 2.4:+41978400 | None:intergenic |
AAGGATCTAATGGCTGAACC+TGG | 0.553969 | 2.4:-41978076 | MS.gene75823:CDS |
ATCATGTTGATGTGCAACAA+AGG | 0.557137 | 2.4:-41978540 | MS.gene75823:CDS |
AGAAGATGCAACTTTGGAGG+AGG | 0.563842 | 2.4:-41977858 | MS.gene75823:CDS |
GCTCCTAGTAAACTAGATGA+TGG | 0.572128 | 2.4:-41977995 | MS.gene75823:CDS |
CAGAAATGGGTCGTGCTCGT+GGG | 0.574652 | 2.4:-41979077 | None:intergenic |
GAAGATGCAACTTTGGAGGA+GGG | 0.576564 | 2.4:-41977857 | MS.gene75823:CDS |
GTCAAGATGATGTGTTTGCA+TGG | 0.582853 | 2.4:-41977910 | MS.gene75823:CDS |
GTATATGATGGTTATGGTGA+TGG | 0.584410 | 2.4:-41978928 | MS.gene75823:CDS |
CATGCTTCATGAACATGGGA+GGG | 0.590059 | 2.4:-41978702 | MS.gene75823:CDS |
TCACACACAACGCATGGCTA+AGG | 0.591731 | 2.4:-41978236 | MS.gene75823:CDS |
AAGTGGACCAGTCAAGATGA+AGG | 0.594919 | 2.4:-41977956 | MS.gene75823:CDS |
ACATTCAAGATGATAGATCT+CGG | 0.598296 | 2.4:-41979038 | MS.gene75823:CDS |
TCTTGGATAGCATTCCTCAA+AGG | 0.601149 | 2.4:-41978576 | MS.gene75823:CDS |
CACCCATGCTTCATGAACAT+GGG | 0.606783 | 2.4:-41978706 | MS.gene75823:CDS |
AAGATGCAACTTTGGAGGAG+GGG | 0.609694 | 2.4:-41977856 | MS.gene75823:CDS |
AAACTAACAGAAGAGTTCAA+AGG | 0.611024 | 2.4:+41978487 | None:intergenic |
GTTTCGTCGACTAACCAACT+TGG | 0.615554 | 2.4:-41978115 | MS.gene75823:CDS |
CACAAGATTCGACAATTGTA+CGG | 0.618314 | 2.4:-41978888 | MS.gene75823:CDS |
TGATGAAAATGTATCCAACT+TGG | 0.619935 | 2.4:-41978729 | MS.gene75823:CDS |
TAACCAACTTGGTGAAGGTG+TGG | 0.620796 | 2.4:-41978104 | MS.gene75823:CDS |
CGTACAATTGTCGAATCTTG+TGG | 0.622061 | 2.4:+41978889 | None:intergenic |
CCATGCTTCATGAACATGGG+AGG | 0.626462 | 2.4:-41978703 | MS.gene75823:CDS |
GCTGAACCTAGAGAATGGAC+TGG | 0.629743 | 2.4:-41978406 | MS.gene75823:CDS |
TCGACTAACCAACTTGGTGA+AGG | 0.633986 | 2.4:-41978109 | MS.gene75823:CDS |
AAACTAACAGGAGACTTCAA+AGG | 0.635174 | 2.4:+41978145 | None:intergenic |
TGGTCAACTTGGTGAACATG+AGG | 0.636156 | 2.4:-41978386 | MS.gene75823:CDS |
ATGCTTCATGAACATGGGAG+GGG | 0.636297 | 2.4:-41978701 | MS.gene75823:CDS |
GTGATGATGATACTATGAAG+TGG | 0.657295 | 2.4:-41977973 | MS.gene75823:CDS |
TGGTTAGTGGACAAAACAGG+AGG | 0.691427 | 2.4:+41978463 | None:intergenic |
TGGTTAGTCGACGAAACAGG+AGG | 0.703043 | 2.4:+41978121 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAATCAGAGAAATAATAATT+TGG | - | chr2.4:41977873-41977892 | MS.gene75823:CDS | 20.0% |
!!! | TCTGATTTTTCTAAAAAGTT+TGG | - | chr2.4:41977907-41977926 | MS.gene75823:CDS | 20.0% |
! | TCAAATTCAAACCAATTTGA+GGG | - | chr2.4:41978669-41978688 | MS.gene75823:CDS | 25.0% |
! | TTCAAATTCAAACCAATTTG+AGG | - | chr2.4:41978668-41978687 | MS.gene75823:CDS | 25.0% |
! | TTGATTGTATATGATGGTTA+TGG | - | chr2.4:41977943-41977962 | MS.gene75823:CDS | 25.0% |
!! | TTCTTCATTTTGTGACAAAA+AGG | + | chr2.4:41979003-41979022 | None:intergenic | 25.0% |
!! | TTTTGCAAACAAGATAAAGA+AGG | - | chr2.4:41978089-41978108 | MS.gene75823:CDS | 25.0% |
!!! | CAAATTGGTTTGAATTTGAA+GGG | + | chr2.4:41978668-41978687 | None:intergenic | 25.0% |
!!! | TCAAATTGGTTTGAATTTGA+AGG | + | chr2.4:41978669-41978688 | None:intergenic | 25.0% |
AAACTAACAGAAGAGTTCAA+AGG | + | chr2.4:41978393-41978412 | None:intergenic | 30.0% | |
AAATGAAGAAGATGCAACTT+TGG | - | chr2.4:41979013-41979032 | MS.gene75823:CDS | 30.0% | |
AAATTCACCAAATTGGTTAG+TGG | + | chr2.4:41978430-41978449 | None:intergenic | 30.0% | |
ACATTCAAGATGATAGATCT+CGG | - | chr2.4:41977839-41977858 | MS.gene75823:CDS | 30.0% | |
ACTTCACAAATTCACCAAAT+TGG | + | chr2.4:41978437-41978456 | None:intergenic | 30.0% | |
AGATTCAAGCTTGCAATAAA+AGG | - | chr2.4:41978235-41978254 | MS.gene75823:CDS | 30.0% | |
ATATGAGCAACAAAAGATTG+AGG | - | chr2.4:41978026-41978045 | MS.gene75823:CDS | 30.0% | |
GAACAACTCAAAACTTTCAT+TGG | - | chr2.4:41978198-41978217 | MS.gene75823:CDS | 30.0% | |
TACAAAGATCTTTGATGTGA+AGG | - | chr2.4:41978062-41978081 | MS.gene75823:CDS | 30.0% | |
TATGAGCAACAAAAGATTGA+GGG | - | chr2.4:41978027-41978046 | MS.gene75823:CDS | 30.0% | |
TGATGAAAATGTATCCAACT+TGG | - | chr2.4:41978148-41978167 | MS.gene75823:CDS | 30.0% | |
TTAGGTATATATTGCCTTTG+AGG | + | chr2.4:41978318-41978337 | None:intergenic | 30.0% | |
! | AAGTGATGAAACTAGTTTCT+TGG | - | chr2.4:41978284-41978303 | MS.gene75823:CDS | 30.0% |
! | ATGAGTAACAATCCAGATTT+TGG | - | chr2.4:41979044-41979063 | MS.gene75823:CDS | 30.0% |
! | ATTTGGTGAATTTGTGAAGT+TGG | - | chr2.4:41978437-41978456 | MS.gene75823:CDS | 30.0% |
! | GAGGAGTTGAATAATTTTGT+GGG | - | chr2.4:41978510-41978529 | MS.gene75823:CDS | 30.0% |
! | TGAGGAGTTGAATAATTTTG+TGG | - | chr2.4:41978509-41978528 | MS.gene75823:CDS | 30.0% |
!!! | TTGCTCATATTTTTCAAGCA+TGG | + | chr2.4:41978016-41978035 | None:intergenic | 30.0% |
AAACTAACAGGAGACTTCAA+AGG | + | chr2.4:41978735-41978754 | None:intergenic | 35.0% | |
ACTTGATGGAATTGGTGAAA+TGG | - | chr2.4:41978560-41978579 | MS.gene75823:CDS | 35.0% | |
ACTTTCATTGGCATTCTAGA+TGG | - | chr2.4:41978210-41978229 | MS.gene75823:CDS | 35.0% | |
ATCATGTTGATGTGCAACAA+AGG | - | chr2.4:41978337-41978356 | MS.gene75823:CDS | 35.0% | |
CACAAGATTCGACAATTGTA+CGG | - | chr2.4:41977989-41978008 | MS.gene75823:CDS | 35.0% | |
CTTGCTAAACTTGATGGAAT+TGG | - | chr2.4:41978552-41978571 | MS.gene75823:CDS | 35.0% | |
GACTTCAAAGGATCATAGAT+AGG | + | chr2.4:41978723-41978742 | None:intergenic | 35.0% | |
GCTTGCTTGATTGTATATGA+TGG | - | chr2.4:41977937-41977956 | MS.gene75823:CDS | 35.0% | |
GTATATGATGGTTATGGTGA+TGG | - | chr2.4:41977949-41977968 | MS.gene75823:CDS | 35.0% | |
TCATGTTGATGTGCAACAAA+GGG | - | chr2.4:41978338-41978357 | MS.gene75823:CDS | 35.0% | |
TGTGAAGTTGGATGATGTAA+TGG | - | chr2.4:41978449-41978468 | MS.gene75823:CDS | 35.0% | |
TGTGGAGTTTAAGGATCTAA+TGG | - | chr2.4:41978791-41978810 | MS.gene75823:CDS | 35.0% | |
TGTTGCACATCAACATGATT+AGG | + | chr2.4:41978336-41978355 | None:intergenic | 35.0% | |
! | AATTGGTTAGTGGACAAAAC+AGG | + | chr2.4:41978420-41978439 | None:intergenic | 35.0% |
! | CACTTTGGAAATCTCAACTT+CGG | + | chr2.4:41978115-41978134 | None:intergenic | 35.0% |
! | GTGATGATGATACTATGAAG+TGG | - | chr2.4:41978904-41978923 | MS.gene75823:CDS | 35.0% |
! | GTTTTGTCCACTAACCAATT+TGG | - | chr2.4:41978420-41978439 | MS.gene75823:CDS | 35.0% |
! | TCACCATCATCTAGTTTACT+AGG | + | chr2.4:41978888-41978907 | None:intergenic | 35.0% |
! | TGCATGATGGCTTTTATCAA+TGG | - | chr2.4:41978694-41978713 | MS.gene75823:CDS | 35.0% |
CACAATCTCTTTGTGCACTT+TGG | + | chr2.4:41978130-41978149 | None:intergenic | 40.0% | |
CGTACAATTGTCGAATCTTG+TGG | + | chr2.4:41977991-41978010 | None:intergenic | 40.0% | |
GAGAATTGGCTGATCAAGAA+TGG | - | chr2.4:41978823-41978842 | MS.gene75823:CDS | 40.0% | |
GCTCCTAGTAAACTAGATGA+TGG | - | chr2.4:41978882-41978901 | MS.gene75823:CDS | 40.0% | |
GTCAAGATGATGTGTTTGCA+TGG | - | chr2.4:41978967-41978986 | MS.gene75823:CDS | 40.0% | |
TAATGGCTGAACCTAGAGAA+TGG | - | chr2.4:41978466-41978485 | MS.gene75823:CDS | 40.0% | |
TCTTGGATAGCATTCCTCAA+AGG | - | chr2.4:41978301-41978320 | MS.gene75823:CDS | 40.0% | |
TGAAGAAGATGCAACTTTGG+AGG | - | chr2.4:41979016-41979035 | MS.gene75823:CDS | 40.0% | |
TTAGCAAGCCATTCTTGAAC+AGG | + | chr2.4:41978540-41978559 | None:intergenic | 40.0% | |
!! | GAATGGCTTGCTAAACTTGA+TGG | - | chr2.4:41978546-41978565 | MS.gene75823:CDS | 40.0% |
!! | GGAAGAGAGTTTTGTCAGTA+CGG | + | chr2.4:41979070-41979089 | None:intergenic | 40.0% |
AAGGATCTAATGGCTGAACC+TGG | - | chr2.4:41978801-41978820 | MS.gene75823:CDS | 45.0% | |
AAGTGGACCAGTCAAGATGA+AGG | - | chr2.4:41978921-41978940 | MS.gene75823:CDS | 45.0% | |
AATGGCTGAACCTGGAGAAT+TGG | - | chr2.4:41978809-41978828 | MS.gene75823:CDS | 45.0% | |
AGTTGACCAGTCCATTCTCT+AGG | + | chr2.4:41978480-41978499 | None:intergenic | 45.0% | |
ATGCTTCATGAACATGGGAG+GGG | - | chr2.4:41978176-41978195 | MS.gene75823:CDS | 45.0% | |
CACCCATGCTTCATGAACAT+GGG | - | chr2.4:41978171-41978190 | MS.gene75823:CDS | 45.0% | |
CATCATGCATGCCCTCAAAT+TGG | + | chr2.4:41978683-41978702 | None:intergenic | 45.0% | |
CATGCTTCATGAACATGGGA+GGG | - | chr2.4:41978175-41978194 | MS.gene75823:CDS | 45.0% | |
CTCCCATGTTCATGAAGCAT+GGG | + | chr2.4:41978176-41978195 | None:intergenic | 45.0% | |
GAAACAGGAGGCAAACTAAC+AGG | + | chr2.4:41978747-41978766 | None:intergenic | 45.0% | |
GAATCTTGTGGCGTAGTCAT+TGG | + | chr2.4:41977979-41977998 | None:intergenic | 45.0% | |
TCTTGATCAGCCAATTCTCC+AGG | + | chr2.4:41978822-41978841 | None:intergenic | 45.0% | |
TGGGCAAACCTGTTCAAGAA+TGG | - | chr2.4:41978529-41978548 | MS.gene75823:CDS | 45.0% | |
TTCATCGCCTTCATCTTGAC+TGG | + | chr2.4:41978931-41978950 | None:intergenic | 45.0% | |
TTGTCAGTACGGCCAAAATC+TGG | + | chr2.4:41979059-41979078 | None:intergenic | 45.0% | |
! | AAGATGCAACTTTGGAGGAG+GGG | - | chr2.4:41979021-41979040 | MS.gene75823:CDS | 45.0% |
! | AGAAGATGCAACTTTGGAGG+AGG | - | chr2.4:41979019-41979038 | MS.gene75823:CDS | 45.0% |
! | AGTTGGTTAGTCGACGAAAC+AGG | + | chr2.4:41978762-41978781 | None:intergenic | 45.0% |
! | CAATTTGAGGGCATGCATGA+TGG | - | chr2.4:41978681-41978700 | MS.gene75823:CDS | 45.0% |
! | GAAGATGCAACTTTGGAGGA+GGG | - | chr2.4:41979020-41979039 | MS.gene75823:CDS | 45.0% |
! | GTTTCGTCGACTAACCAACT+TGG | - | chr2.4:41978762-41978781 | MS.gene75823:CDS | 45.0% |
! | TAACCAACTTGGTGAAGGTG+TGG | - | chr2.4:41978773-41978792 | MS.gene75823:CDS | 45.0% |
! | TCGACTAACCAACTTGGTGA+AGG | - | chr2.4:41978768-41978787 | MS.gene75823:CDS | 45.0% |
! | TGGTCAACTTGGTGAACATG+AGG | - | chr2.4:41978491-41978510 | MS.gene75823:CDS | 45.0% |
! | TGGTGAAGGTGTGGAGTTTA+AGG | - | chr2.4:41978782-41978801 | MS.gene75823:CDS | 45.0% |
! | TGGTTAGTGGACAAAACAGG+AGG | + | chr2.4:41978417-41978436 | None:intergenic | 45.0% |
!! | AGAGAATGGACTGGTCAACT+TGG | - | chr2.4:41978480-41978499 | MS.gene75823:CDS | 45.0% |
ACTCCACACCTTCACCAAGT+TGG | + | chr2.4:41978779-41978798 | None:intergenic | 50.0% | |
ATGAAGCATGGGTGCCAAGT+TGG | + | chr2.4:41978165-41978184 | None:intergenic | 50.0% | |
CCATGCTTCATGAACATGGG+AGG | - | chr2.4:41978174-41978193 | MS.gene75823:CDS | 50.0% | |
CCTCCCATGTTCATGAAGCA+TGG | + | chr2.4:41978177-41978196 | None:intergenic | 50.0% | |
GCACCCATGCTTCATGAACA+TGG | - | chr2.4:41978170-41978189 | MS.gene75823:CDS | 50.0% | |
GCTGAACCTAGAGAATGGAC+TGG | - | chr2.4:41978471-41978490 | MS.gene75823:CDS | 50.0% | |
TCACACACAACGCATGGCTA+AGG | - | chr2.4:41978641-41978660 | MS.gene75823:CDS | 50.0% | |
! | TGGTTAGTCGACGAAACAGG+AGG | + | chr2.4:41978759-41978778 | None:intergenic | 50.0% |
CACTGCTCACACACAACGCA+TGG | - | chr2.4:41978635-41978654 | MS.gene75823:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 41977805 | 41979094 | 41977805 | ID=MS.gene75823 |
chr2.4 | mRNA | 41977805 | 41979094 | 41977805 | ID=MS.gene75823.t1;Parent=MS.gene75823 |
chr2.4 | exon | 41977805 | 41979094 | 41977805 | ID=MS.gene75823.t1.exon1;Parent=MS.gene75823.t1 |
chr2.4 | CDS | 41977805 | 41979094 | 41977805 | ID=cds.MS.gene75823.t1;Parent=MS.gene75823.t1 |
Gene Sequence |
Protein sequence |