AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75978

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75978.t1 MTR_2g105290 96.591 176 6 0 1 176 1 176 1.15e-126 353
MS.gene75978.t1 MTR_4g127140 83.871 186 20 2 1 176 1 186 3.59e-101 289
MS.gene75978.t1 MTR_8g086290 69.461 167 51 0 1 167 1 167 3.40e-84 246
MS.gene75978.t1 MTR_7g028448 65.031 163 49 2 1 163 1 155 9.05e-66 199
MS.gene75978.t1 MTR_4g036915 65.031 163 49 2 1 163 1 155 9.05e-66 199
MS.gene75978.t1 MTR_3g052920 40.351 171 92 2 8 171 5 172 9.73e-40 135
MS.gene75978.t1 MTR_1g012570 38.728 173 96 2 8 173 5 174 1.69e-39 134
MS.gene75978.t1 MTR_1g106070 38.150 173 97 2 8 173 5 174 3.28e-39 132
MS.gene75978.t1 MTR_1g105910 38.728 173 96 2 8 173 5 174 1.13e-38 132
MS.gene75978.t1 MTR_8g043650 39.766 171 93 3 8 171 5 172 1.39e-38 132
MS.gene75978.t1 MTR_1g105920 38.012 171 96 2 8 171 5 172 7.79e-38 130
MS.gene75978.t1 MTR_2g030740 38.012 171 96 3 8 171 5 172 1.99e-36 126
MS.gene75978.t1 MTR_1g108510 40.000 165 89 2 8 165 5 166 2.34e-36 126
MS.gene75978.t1 MTR_3g080940 38.953 172 101 1 6 173 3 174 3.06e-36 125
MS.gene75978.t1 MTR_3g030770 39.394 165 90 2 8 165 5 166 9.18e-36 124
MS.gene75978.t1 MTR_1g108580 36.970 165 94 2 8 165 5 166 1.79e-33 119
MS.gene75978.t1 MTR_2g093190 38.788 165 91 2 8 165 5 166 2.55e-33 118
MS.gene75978.t1 MTR_1g105905 35.625 160 93 2 21 173 1 157 1.70e-31 113
MS.gene75978.t1 MTR_0121s0080 36.810 163 93 3 8 163 5 164 3.66e-30 110
MS.gene75978.t1 MTR_1g077360 36.686 169 97 2 8 169 5 170 5.68e-30 110
MS.gene75978.t1 MTR_3g052870 42.623 122 60 2 8 122 5 123 1.54e-29 108
MS.gene75978.t1 MTR_5g045560 33.929 168 101 2 8 168 5 169 1.73e-29 108
MS.gene75978.t1 MTR_1g075600 35.294 170 98 2 8 169 5 170 2.05e-29 108
MS.gene75978.t1 MTR_5g053390 35.465 172 99 2 8 171 5 172 4.86e-29 107
MS.gene75978.t1 MTR_2g085250 34.483 174 102 3 8 173 5 174 9.63e-29 106
MS.gene75978.t1 MTR_2g085280 34.884 172 100 3 8 171 5 172 9.94e-29 106
MS.gene75978.t1 MTR_5g055100 35.465 172 99 3 8 171 5 172 2.40e-26 100
MS.gene75978.t1 MTR_4g131030 40.741 135 76 3 11 142 1 134 2.80e-26 99.8
MS.gene75978.t1 MTR_0121s0100 41.880 117 58 2 8 117 5 118 3.52e-25 94.7
MS.gene75978.t1 MTR_1g047550 45.455 99 52 1 11 107 1 99 2.46e-24 94.0
MS.gene75978.t1 MTR_8g079502 41.964 112 63 1 11 120 1 112 3.00e-24 93.6
MS.gene75978.t1 MTR_8g022970 35.976 164 90 4 5 161 15 170 3.08e-23 91.3
MS.gene75978.t1 MTR_8g046350 36.641 131 80 2 11 139 1 130 3.09e-23 90.5
MS.gene75978.t1 MTR_7g062350 36.301 146 81 4 29 166 38 179 4.57e-23 92.4
MS.gene75978.t1 MTR_3g030780 38.168 131 69 4 8 130 5 131 2.57e-22 87.4
MS.gene75978.t1 MTR_1g054265 39.823 113 66 1 11 121 1 113 5.09e-22 87.4
MS.gene75978.t1 MTR_1g063160 48.810 84 41 1 11 94 1 82 1.02e-21 87.0
MS.gene75978.t1 MTR_8g051580 41.414 99 56 1 11 107 1 99 2.17e-20 83.6
MS.gene75978.t1 MTR_4g094632 50.000 72 36 0 11 82 1 72 5.09e-20 82.0
MS.gene75978.t1 MTR_4g094638 41.000 100 52 2 11 104 1 99 9.97e-20 82.0
MS.gene75978.t1 MTR_3g437790 36.232 138 83 3 29 161 30 167 1.68e-19 81.6
MS.gene75978.t1 MTR_3g109930 33.582 134 87 2 30 161 20 153 1.43e-17 76.3
MS.gene75978.t1 MTR_3g452380 42.857 84 48 0 8 91 13 96 4.05e-17 76.3
MS.gene75978.t1 MTR_8g033270 50.725 69 34 0 11 79 1 69 4.35e-17 76.3
MS.gene75978.t1 MTR_8g087860 44.828 87 47 1 6 92 13 98 5.30e-17 76.3
MS.gene75978.t1 MTR_1g029670 34.483 116 61 2 11 124 1 103 5.40e-17 74.7
MS.gene75978.t1 MTR_3g067870 48.485 66 34 0 19 84 83 148 5.79e-17 73.9
MS.gene75978.t1 MTR_3g005530 46.667 75 40 0 11 85 1 75 5.97e-17 75.5
MS.gene75978.t1 MTR_1g053070 52.174 69 33 0 11 79 1 69 6.52e-17 75.9
MS.gene75978.t1 MTR_0003s0590 46.835 79 42 0 11 89 1 79 8.38e-17 75.9
MS.gene75978.t1 MTR_3g067875 54.717 53 24 0 24 76 4 56 8.91e-17 71.2
MS.gene75978.t1 MTR_3g088615 44.615 65 36 0 11 75 1 65 4.33e-16 72.4
MS.gene75978.t1 MTR_2g045020 34.091 176 98 5 5 176 20 181 4.47e-16 72.4
MS.gene75978.t1 MTR_4g093970 32.240 183 98 3 11 176 27 200 4.93e-16 73.6
MS.gene75978.t1 MTR_2g017865 33.557 149 86 4 2 150 7 142 5.26e-16 73.6
MS.gene75978.t1 MTR_4g084740 34.641 153 93 5 11 160 1 149 9.20e-16 73.9
MS.gene75978.t1 MTR_5g021270 39.604 101 54 2 11 104 1 101 1.16e-15 72.4
MS.gene75978.t1 MTR_5g021270 39.604 101 54 2 11 104 1 101 1.17e-15 72.4
MS.gene75978.t1 MTR_3g113030 40.179 112 52 3 11 122 1 97 1.38e-15 72.0
MS.gene75978.t1 MTR_5g066180 43.478 69 39 0 11 79 1 69 1.41e-15 72.0
MS.gene75978.t1 MTR_2g461710 56.364 55 24 0 11 65 1 55 1.60e-15 67.8
MS.gene75978.t1 MTR_5g066960 46.667 60 32 0 11 70 1 60 2.58e-15 67.0
MS.gene75978.t1 MTR_4g109810 40.000 95 55 2 11 103 1 95 2.86e-15 71.2
MS.gene75978.t1 MTR_4g102530 49.275 69 35 0 11 79 1 69 4.47e-15 70.1
MS.gene75978.t1 MTR_7g016600 54.386 57 26 0 11 67 1 57 4.87e-15 70.9
MS.gene75978.t1 MTR_3g102570 49.296 71 35 1 11 80 1 71 5.31e-15 71.6
MS.gene75978.t1 MTR_8g097090 43.902 82 28 2 11 74 1 82 5.63e-15 70.5
MS.gene75978.t1 MTR_8g033220 37.500 112 67 1 11 119 1 112 5.72e-15 70.1
MS.gene75978.t1 MTR_8g033220 37.500 112 67 1 11 119 1 112 6.57e-15 70.1
MS.gene75978.t1 MTR_6g015975 48.611 72 36 1 11 81 1 72 6.83e-15 70.5
MS.gene75978.t1 MTR_5g032520 54.386 57 26 0 11 67 1 57 7.50e-15 70.1
MS.gene75978.t1 MTR_5g032150 54.386 57 26 0 11 67 1 57 8.26e-15 70.1
MS.gene75978.t1 MTR_2g009890 45.070 71 39 0 11 81 1 71 8.76e-15 70.5
MS.gene75978.t1 MTR_3g084980 56.140 57 25 0 11 67 1 57 9.93e-15 70.1
MS.gene75978.t1 MTR_1g101970 44.928 69 38 0 11 79 1 69 1.05e-14 68.9
MS.gene75978.t1 MTR_6g464720 45.714 70 37 1 11 79 1 70 1.21e-14 69.7
MS.gene75978.t1 MTR_7g075870 45.205 73 40 0 11 83 1 73 1.22e-14 69.3
MS.gene75978.t1 MTR_5g046870 52.632 57 27 0 11 67 1 57 1.66e-14 66.6
MS.gene75978.t1 MTR_7g075870 53.448 58 27 0 11 68 1 58 1.74e-14 68.9
MS.gene75978.t1 MTR_7g075850 48.438 64 33 0 11 74 1 64 2.16e-14 68.9
MS.gene75978.t1 MTR_1g038300 44.000 75 40 1 11 83 1 75 3.60e-14 68.2
MS.gene75978.t1 MTR_4g109830 44.286 70 38 1 11 79 1 70 5.47e-14 67.8
MS.gene75978.t1 MTR_5g031000 42.029 69 40 0 11 79 1 69 6.91e-14 67.4
MS.gene75978.t1 MTR_5g031000 42.029 69 40 0 11 79 1 69 6.97e-14 67.4
MS.gene75978.t1 MTR_8g066260 50.000 58 29 0 11 68 1 58 7.06e-14 67.4
MS.gene75978.t1 MTR_5g046790 50.909 55 27 0 11 65 1 55 9.18e-14 66.6
MS.gene75978.t1 MTR_4g093030 52.727 55 26 0 11 65 1 55 1.53e-13 65.1
MS.gene75978.t1 MTR_1g108500 51.852 54 26 0 25 78 110 163 2.88e-13 66.6
MS.gene75978.t1 MTR_3g067910 46.429 56 30 0 25 80 3 58 5.77e-13 62.4
MS.gene75978.t1 MTR_4g036050 31.818 110 74 1 11 119 1 110 6.46e-13 63.9
MS.gene75978.t1 MTR_4g036050 31.818 110 74 1 11 119 1 110 7.54e-13 63.5
MS.gene75978.t1 MTR_4g036050 31.818 110 74 1 11 119 1 110 8.55e-13 63.9
MS.gene75978.t1 MTR_4g036050 31.818 110 74 1 11 119 1 110 1.04e-12 63.5
MS.gene75978.t1 MTR_7g016630 41.429 70 40 1 11 79 1 70 1.84e-12 63.9
MS.gene75978.t1 MTR_4g108720 50.943 53 26 0 11 63 1 53 2.84e-12 63.9
MS.gene75978.t1 MTR_1g041615 38.384 99 56 2 25 122 19 113 3.94e-12 60.8
MS.gene75978.t1 MTR_1g075570 31.148 122 74 2 21 142 1 112 4.00e-12 61.6
MS.gene75978.t1 MTR_5g041650 28.488 172 75 7 11 166 38 177 1.30e-11 62.4
MS.gene75978.t1 MTR_1g114730 26.056 142 97 2 11 150 1 136 6.41e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75978.t1 AT5G60440 37.500 168 98 2 8 168 3 170 2.59e-32 117
MS.gene75978.t1 AT2G24840 37.975 158 93 3 10 162 61 218 2.18e-29 109
MS.gene75978.t1 AT1G65360 35.152 165 104 2 8 169 3 167 2.58e-27 102
MS.gene75978.t1 AT1G01530 50.562 89 39 1 8 91 3 91 2.96e-24 95.5
MS.gene75978.t1 AT4G36590 34.161 161 96 3 12 162 7 167 2.57e-23 92.8
MS.gene75978.t1 AT2G34440 35.374 147 83 4 11 150 1 142 2.89e-22 88.2
MS.gene75978.t1 AT1G28460 35.503 169 94 4 8 165 4 168 2.95e-22 88.6
MS.gene75978.t1 AT3G66656 42.400 125 56 3 11 123 1 121 1.33e-21 86.7
MS.gene75978.t1 AT1G29962 34.302 172 95 5 8 165 4 171 4.43e-21 85.5
MS.gene75978.t1 AT3G04100 30.588 170 108 4 8 168 10 178 1.19e-19 82.4
MS.gene75978.t1 AT5G10140 43.299 97 52 2 11 106 1 95 1.40e-19 81.3
MS.gene75978.t1 AT5G10140 43.299 97 52 2 11 106 1 95 2.47e-19 80.9
MS.gene75978.t1 AT5G10140 43.299 97 52 2 11 106 1 95 3.08e-19 81.3
MS.gene75978.t1 AT5G10140 43.299 97 52 2 11 106 1 95 3.74e-19 80.5
MS.gene75978.t1 AT2G42830 38.710 124 60 4 4 123 9 120 1.30e-18 80.5
MS.gene75978.t1 AT2G42830 38.710 124 60 4 4 123 9 120 1.46e-18 80.5
MS.gene75978.t1 AT1G28450 32.941 170 96 5 8 163 4 169 1.99e-18 78.6
MS.gene75978.t1 AT4G09960 35.252 139 77 3 11 149 1 126 2.42e-18 79.3
MS.gene75978.t1 AT4G09960 34.014 147 84 3 3 149 19 152 2.45e-18 80.1
MS.gene75978.t1 AT4G09960 35.252 139 77 3 11 149 2 127 2.66e-18 79.3
MS.gene75978.t1 AT4G09960 35.252 139 77 3 11 149 1 126 2.87e-18 79.3
MS.gene75978.t1 AT4G09960 35.252 139 77 3 11 149 11 136 3.11e-18 79.3
MS.gene75978.t1 AT3G58780 38.655 119 57 4 9 123 20 126 6.55e-18 78.6
MS.gene75978.t1 AT3G58780 38.655 119 57 4 9 123 14 120 6.64e-18 78.6
MS.gene75978.t1 AT3G58780 38.655 119 57 4 9 123 14 120 8.15e-18 79.0
MS.gene75978.t1 AT3G57230 42.353 85 47 1 11 93 1 85 9.98e-18 75.9
MS.gene75978.t1 AT1G72350 28.834 163 87 3 12 174 43 176 1.71e-17 77.0
MS.gene75978.t1 AT1G77950 49.296 71 35 1 11 80 1 71 2.11e-17 77.4
MS.gene75978.t1 AT1G77950 49.296 71 35 1 11 80 1 71 2.11e-17 77.4
MS.gene75978.t1 AT1G77950 49.296 71 35 1 11 80 1 71 2.11e-17 77.4
MS.gene75978.t1 AT1G77950 49.296 71 35 1 11 80 1 71 2.11e-17 77.4
MS.gene75978.t1 AT5G20240 40.000 115 66 2 11 123 1 114 2.12e-17 75.1
MS.gene75978.t1 AT5G20240 49.315 73 35 1 11 81 1 73 2.42e-17 76.3
MS.gene75978.t1 AT4G09960 41.053 95 50 1 11 105 96 184 3.80e-17 77.8
MS.gene75978.t1 AT3G57230 42.353 85 47 1 11 93 1 85 3.96e-17 76.3
MS.gene75978.t1 AT3G57230 42.353 85 47 1 11 93 1 85 3.96e-17 76.3
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 4.04e-17 73.2
MS.gene75978.t1 AT3G54340 53.226 62 29 0 11 72 1 62 4.08e-17 76.3
MS.gene75978.t1 AT5G23260 32.353 170 95 5 6 172 12 164 4.47e-17 76.6
MS.gene75978.t1 AT1G22130 56.897 58 25 0 11 68 1 58 4.54e-17 77.4
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 4.80e-17 74.3
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 4.80e-17 74.3
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 4.80e-17 74.3
MS.gene75978.t1 AT4G22950 37.273 110 68 1 11 119 1 110 4.94e-17 74.7
MS.gene75978.t1 AT1G77980 49.296 71 35 1 11 80 1 71 5.75e-17 77.0
MS.gene75978.t1 AT5G23260 29.936 157 95 3 11 163 1 146 7.00e-17 75.9
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 7.23e-17 73.9
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 7.23e-17 73.9
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 7.23e-17 73.9
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 7.23e-17 73.9
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 7.23e-17 73.9
MS.gene75978.t1 AT3G57390 33.333 147 93 3 11 154 1 145 8.13e-17 75.5
MS.gene75978.t1 AT5G51870 46.835 79 42 0 8 86 21 99 1.06e-16 74.3
MS.gene75978.t1 AT5G51860 47.368 76 40 0 11 86 1 76 1.60e-16 73.9
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 1.64e-16 73.9
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 1.64e-16 73.9
MS.gene75978.t1 AT2G45660 38.793 116 59 3 11 119 1 111 1.66e-16 73.2
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 1.77e-16 73.9
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 1.77e-16 73.9
MS.gene75978.t1 AT5G62165 46.835 79 42 0 11 89 1 79 1.77e-16 73.9
MS.gene75978.t1 AT4G22950 37.273 110 68 1 11 119 1 110 1.82e-16 74.3
MS.gene75978.t1 AT4G22950 37.273 110 68 1 11 119 1 110 1.82e-16 74.3
MS.gene75978.t1 AT3G57390 33.333 147 93 3 11 154 1 145 1.92e-16 74.7
MS.gene75978.t1 AT5G13790 44.706 85 45 1 11 95 1 83 2.07e-16 75.1
MS.gene75978.t1 AT4G18960 37.681 138 69 4 12 147 18 140 2.12e-16 74.7
MS.gene75978.t1 AT3G58780 37.607 117 54 4 9 123 14 113 2.38e-16 74.3
MS.gene75978.t1 AT5G23260 29.375 160 98 3 6 161 12 160 2.42e-16 74.7
MS.gene75978.t1 AT5G51860 47.368 76 40 0 11 86 1 76 2.54e-16 73.6
MS.gene75978.t1 AT5G51870 47.368 76 40 0 11 86 1 76 2.92e-16 73.6
MS.gene75978.t1 AT5G13790 50.725 69 34 0 11 79 1 69 3.26e-16 74.3
MS.gene75978.t1 AT5G51870 47.368 76 40 0 11 86 1 76 3.30e-16 72.4
MS.gene75978.t1 AT5G23260 32.727 165 91 5 11 172 1 148 3.62e-16 73.9
MS.gene75978.t1 AT2G45650 49.275 69 35 0 11 79 1 69 4.18e-16 73.9
MS.gene75978.t1 AT4G37940 44.000 75 42 0 11 85 1 75 5.77e-16 72.8
MS.gene75978.t1 AT4G37940 44.000 75 42 0 11 85 1 75 5.92e-16 73.2
MS.gene75978.t1 AT5G51870 47.368 76 40 0 11 86 1 76 6.39e-16 72.8
MS.gene75978.t1 AT2G45660 38.793 116 59 3 11 119 1 111 6.88e-16 72.8
MS.gene75978.t1 AT5G51870 46.753 77 41 0 10 86 10 86 7.16e-16 72.8
MS.gene75978.t1 AT4G37940 44.000 75 42 0 11 85 1 75 7.96e-16 71.6
MS.gene75978.t1 AT4G24540 31.953 169 97 4 11 167 1 163 9.73e-16 72.4
MS.gene75978.t1 AT3G61120 45.070 71 39 0 11 81 1 71 1.86e-15 72.0
MS.gene75978.t1 AT4G11880 51.613 62 30 0 11 72 1 62 3.48e-15 70.1
MS.gene75978.t1 AT4G11880 51.613 62 30 0 11 72 1 62 3.48e-15 70.1
MS.gene75978.t1 AT2G22540 47.826 69 36 0 11 79 1 69 3.58e-15 71.2
MS.gene75978.t1 AT2G22540 47.826 69 36 0 11 79 1 69 3.58e-15 71.2
MS.gene75978.t1 AT2G22630 48.000 75 31 1 11 85 1 67 4.02e-15 70.9
MS.gene75978.t1 AT2G22630 48.000 75 31 1 11 85 1 67 4.02e-15 70.9
MS.gene75978.t1 AT3G58780 33.824 136 65 4 9 123 14 145 4.52e-15 71.2
MS.gene75978.t1 AT5G65070 44.286 70 38 1 11 79 1 70 5.73e-15 68.6
MS.gene75978.t1 AT4G11880 55.172 58 26 0 11 68 1 58 8.06e-15 69.7
MS.gene75978.t1 AT4G11880 55.172 58 26 0 11 68 1 58 8.06e-15 69.7
MS.gene75978.t1 AT2G03710 54.386 57 26 0 11 67 1 57 8.30e-15 69.3
MS.gene75978.t1 AT5G65070 44.286 70 38 1 11 79 1 70 8.82e-15 69.3
MS.gene75978.t1 AT1G24260 54.386 57 26 0 11 67 1 57 1.16e-14 70.1
MS.gene75978.t1 AT2G22540 54.545 55 25 0 11 65 1 55 1.18e-14 69.7
MS.gene75978.t1 AT1G24260 54.386 57 26 0 11 67 1 57 1.19e-14 69.7
MS.gene75978.t1 AT2G03710 54.386 57 26 0 11 67 1 57 1.30e-14 69.7
MS.gene75978.t1 AT2G03710 54.386 57 26 0 11 67 1 57 1.31e-14 69.7
MS.gene75978.t1 AT5G15800 54.386 57 26 0 11 67 1 57 1.35e-14 69.7
MS.gene75978.t1 AT1G24260 54.386 57 26 0 11 67 1 57 1.37e-14 69.7
MS.gene75978.t1 AT1G47760 48.485 66 34 0 11 76 1 66 1.68e-14 68.2
MS.gene75978.t1 AT5G65050 49.180 61 31 0 11 71 1 61 2.06e-14 67.8
MS.gene75978.t1 AT3G02310 54.386 57 26 0 11 67 1 57 2.22e-14 68.2
MS.gene75978.t1 AT5G65070 44.286 70 38 1 11 79 1 70 2.27e-14 68.9
MS.gene75978.t1 AT5G65070 44.286 70 38 1 11 79 1 70 2.69e-14 68.2
MS.gene75978.t1 AT5G15800 54.386 57 26 0 11 67 1 57 2.84e-14 68.9
MS.gene75978.t1 AT5G65070 45.312 64 35 0 11 74 1 64 3.37e-14 68.6
MS.gene75978.t1 AT3G02310 54.386 57 26 0 11 67 1 57 4.76e-14 68.2
MS.gene75978.t1 AT5G65050 49.180 61 31 0 11 71 1 61 6.50e-14 67.0
MS.gene75978.t1 AT5G65050 49.180 61 31 0 11 71 1 61 6.98e-14 66.6
MS.gene75978.t1 AT5G65050 49.180 61 31 0 11 71 1 61 6.99e-14 66.6
MS.gene75978.t1 AT1G69120 48.276 58 30 0 11 68 1 58 7.60e-14 67.4
MS.gene75978.t1 AT5G60910 52.727 55 26 0 11 65 1 55 8.14e-14 67.4
MS.gene75978.t1 AT2G14210 48.276 58 30 0 11 68 1 58 8.24e-14 67.4
MS.gene75978.t1 AT1G26310 50.000 58 29 0 11 68 1 58 8.36e-14 67.8
MS.gene75978.t1 AT2G14210 48.276 58 30 0 11 68 1 58 1.16e-13 67.0
MS.gene75978.t1 AT5G65060 47.541 61 32 0 11 71 1 61 1.46e-13 65.9
MS.gene75978.t1 AT3G30260 49.123 57 29 0 11 67 1 57 1.51e-13 67.0
MS.gene75978.t1 AT5G65060 47.541 61 32 0 11 71 1 61 1.91e-13 65.9
MS.gene75978.t1 AT1G69120 48.276 58 30 0 11 68 1 58 2.10e-13 66.6
MS.gene75978.t1 AT5G65060 47.541 61 32 0 11 71 1 61 2.24e-13 65.5
MS.gene75978.t1 AT5G65080 31.707 164 95 4 6 169 3 149 3.10e-13 65.5
MS.gene75978.t1 AT1G71692 39.759 83 49 1 11 92 1 83 3.34e-13 65.5
MS.gene75978.t1 AT4G37435 49.123 57 29 0 11 67 1 57 7.72e-13 63.9
MS.gene75978.t1 AT1G31140 29.655 145 88 4 11 154 1 132 1.21e-12 63.9
MS.gene75978.t1 AT5G65080 31.447 159 93 5 11 169 8 150 1.52e-12 63.2
MS.gene75978.t1 AT1G69540 24.309 181 115 6 11 170 1 180 6.06e-12 63.2
MS.gene75978.t1 AT1G69540 24.309 181 115 6 11 170 1 180 9.64e-12 62.8
MS.gene75978.t1 AT1G18750 26.380 163 80 4 11 161 1 135 1.04e-11 62.4
MS.gene75978.t1 AT1G18750 26.380 163 80 4 11 161 1 135 1.05e-11 62.4
MS.gene75978.t1 AT1G18750 43.860 57 32 0 11 67 1 57 1.37e-11 62.4
MS.gene75978.t1 AT5G49490 36.047 86 51 1 1 82 34 119 1.74e-11 61.6
MS.gene75978.t1 AT1G31140 28.859 149 86 4 11 154 1 134 1.76e-11 60.8
MS.gene75978.t1 AT2G26320 44.262 61 34 0 8 68 14 74 2.25e-11 58.2
MS.gene75978.t1 AT5G49420 30.409 171 85 6 8 169 3 148 3.36e-11 60.8
MS.gene75978.t1 AT2G03060 44.068 59 32 1 11 68 1 59 4.74e-11 60.8
MS.gene75978.t1 AT2G03060 44.068 59 32 1 11 68 1 59 4.74e-11 60.8
MS.gene75978.t1 AT2G03060 44.068 59 32 1 11 68 1 59 4.74e-11 60.8
MS.gene75978.t1 AT2G03060 44.068 59 32 1 11 68 1 59 4.87e-11 60.5

Find 32 sgRNAs with CRISPR-Local

Find 36 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATCAACTTGAACAATTTA+TGG 0.139604 7.3:+80530124 MS.gene75978:CDS
GCCCCATGTTCTTCTTTCTT+TGG 0.236667 7.3:-80529707 None:intergenic
GGTGACAAACTTTACTGTTT+TGG 0.272165 7.3:+80529873 MS.gene75978:CDS
ACTAGAAGATGTTCAAATTA+TGG 0.291354 7.3:+80530046 MS.gene75978:CDS
TTTCACCATCACCATGGATA+TGG 0.310081 7.3:+80529680 None:intergenic
CTTCCTCCTTAACTCGTAAA+TGG 0.312319 7.3:-80530150 None:intergenic
CCTTCTTGATCTCAATCTTC+TGG 0.316747 7.3:-80529731 None:intergenic
TGGTGTCCATTTACGAGTTA+AGG 0.353042 7.3:+80530144 MS.gene75978:CDS
TGAGAAAGTGACAAGTTTGT+TGG 0.353316 7.3:-80529766 None:intergenic
CAAAGGAACCACTGAGTTTG+AGG 0.448124 7.3:+80529932 MS.gene75978:CDS
TTCCTTTGACGTAGCTATTG+AGG 0.468952 7.3:-80529917 None:intergenic
AAGGAGGAAGCTTGTTGAAA+GGG 0.480405 7.3:+80530163 MS.gene75978:CDS
TTGAGGACAACGTTAGTGTC+GGG 0.518814 7.3:-80529900 None:intergenic
AGATTACAATAGACAATATG+AGG 0.522743 7.3:+80529989 MS.gene75978:CDS
TCTTTGGTTAACCATATCCA+TGG 0.535708 7.3:-80529691 None:intergenic
TAAGGAGGAAGCTTGTTGAA+AGG 0.551823 7.3:+80530162 MS.gene75978:CDS
CTATTGTAATCTTTGCAAGT+CGG 0.565418 7.3:-80529978 None:intergenic
ATTGAGGACAACGTTAGTGT+CGG 0.575860 7.3:-80529901 None:intergenic
ACCAGGGGAAAACACAATGA+TGG 0.576978 7.3:-80529853 None:intergenic
GTCCTCAATAGCTACGTCAA+AGG 0.585254 7.3:+80529915 MS.gene75978:CDS
AACAGTAAAGTTTGTCACCA+GGG 0.588561 7.3:-80529869 None:intergenic
CTTTGAATCCTCAAACTCAG+TGG 0.591334 7.3:-80529940 None:intergenic
GGCGCAAAAGACGTTGGAGA+CGG 0.599927 7.3:+80530013 MS.gene75978:CDS
AACCAAAGAAAGAAGAACAT+GGG 0.601697 7.3:+80529705 MS.gene75978:CDS
AAACAGTAAAGTTTGTCACC+AGG 0.603204 7.3:-80529870 None:intergenic
TGAGGAGGCGCAAAAGACGT+TGG 0.623986 7.3:+80530007 MS.gene75978:CDS
TGTCCATTTACGAGTTAAGG+AGG 0.631401 7.3:+80530147 MS.gene75978:CDS
CCAGAAGATTGAGATCAAGA+AGG 0.650458 7.3:+80529731 MS.gene75978:CDS
TAACCAAAGAAAGAAGAACA+TGG 0.653064 7.3:+80529704 MS.gene75978:CDS
ACAGTAAAGTTTGTCACCAG+GGG 0.658943 7.3:-80529868 None:intergenic
ACCAAAGAAAGAAGAACATG+GGG 0.674096 7.3:+80529706 MS.gene75978:CDS
TTACAATAGACAATATGAGG+AGG 0.689166 7.3:+80529992 MS.gene75978:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ACTAGAAGATGTTCAAATTA+TGG + chr7.3:80530046-80530065 MS.gene75978:CDS 25.0%
! AGATTACAATAGACAATATG+AGG + chr7.3:80529989-80530008 MS.gene75978:CDS 25.0%
! TGATCAACTTGAACAATTTA+TGG + chr7.3:80530124-80530143 MS.gene75978:CDS 25.0%
AACCAAAGAAAGAAGAACAT+GGG + chr7.3:80529705-80529724 MS.gene75978:CDS 30.0%
ACTTTCTCAAAAAGAAGACA+AGG + chr7.3:80529780-80529799 MS.gene75978:CDS 30.0%
CTATTGTAATCTTTGCAAGT+CGG - chr7.3:80529981-80530000 None:intergenic 30.0%
TAACCAAAGAAAGAAGAACA+TGG + chr7.3:80529704-80529723 MS.gene75978:CDS 30.0%
TTACAATAGACAATATGAGG+AGG + chr7.3:80529992-80530011 MS.gene75978:CDS 30.0%
! ATGGCTAAGATTTTCAACAA+GGG + chr7.3:80530065-80530084 MS.gene75978:CDS 30.0%
! TATGGCTAAGATTTTCAACA+AGG + chr7.3:80530064-80530083 MS.gene75978:CDS 30.0%
AAACAGTAAAGTTTGTCACC+AGG - chr7.3:80529873-80529892 None:intergenic 35.0%
AACAGTAAAGTTTGTCACCA+GGG - chr7.3:80529872-80529891 None:intergenic 35.0%
ACCAAAGAAAGAAGAACATG+GGG + chr7.3:80529706-80529725 MS.gene75978:CDS 35.0%
TGAGAAAGTGACAAGTTTGT+TGG - chr7.3:80529769-80529788 None:intergenic 35.0%
! GGTGACAAACTTTACTGTTT+TGG + chr7.3:80529873-80529892 MS.gene75978:CDS 35.0%
ACAGTAAAGTTTGTCACCAG+GGG - chr7.3:80529871-80529890 None:intergenic 40.0%
ATTGAGGACAACGTTAGTGT+CGG - chr7.3:80529904-80529923 None:intergenic 40.0%
CCAGAAGATTGAGATCAAGA+AGG + chr7.3:80529731-80529750 MS.gene75978:CDS 40.0%
CCTTCTTGATCTCAATCTTC+TGG - chr7.3:80529734-80529753 None:intergenic 40.0%
CTTCCTCCTTAACTCGTAAA+TGG - chr7.3:80530153-80530172 None:intergenic 40.0%
CTTTGAATCCTCAAACTCAG+TGG - chr7.3:80529943-80529962 None:intergenic 40.0%
TGGTGTCCATTTACGAGTTA+AGG + chr7.3:80530144-80530163 MS.gene75978:CDS 40.0%
TGTCCATTTACGAGTTAAGG+AGG + chr7.3:80530147-80530166 MS.gene75978:CDS 40.0%
TTCCTTTGACGTAGCTATTG+AGG - chr7.3:80529920-80529939 None:intergenic 40.0%
! AGATTTTCAACAAGGGTGAC+TGG + chr7.3:80530072-80530091 MS.gene75978:CDS 40.0%
!! AAGGAGGAAGCTTGTTGAAA+GGG + chr7.3:80530163-80530182 MS.gene75978:CDS 40.0%
!! TAAGGAGGAAGCTTGTTGAA+AGG + chr7.3:80530162-80530181 MS.gene75978:CDS 40.0%
ACCAGGGGAAAACACAATGA+TGG - chr7.3:80529856-80529875 None:intergenic 45.0%
CAAAGGAACCACTGAGTTTG+AGG + chr7.3:80529932-80529951 MS.gene75978:CDS 45.0%
GCCCCATGTTCTTCTTTCTT+TGG - chr7.3:80529710-80529729 None:intergenic 45.0%
GTCCTCAATAGCTACGTCAA+AGG + chr7.3:80529915-80529934 MS.gene75978:CDS 45.0%
TTGAGGACAACGTTAGTGTC+GGG - chr7.3:80529903-80529922 None:intergenic 45.0%
! TTTTCAACAAGGGTGACTGG+TGG + chr7.3:80530075-80530094 MS.gene75978:CDS 45.0%
! GCCATCATTGTGTTTTCCCC+TGG + chr7.3:80529852-80529871 MS.gene75978:CDS 50.0%
GGCGCAAAAGACGTTGGAGA+CGG + chr7.3:80530013-80530032 MS.gene75978:CDS 55.0%
! TGAGGAGGCGCAAAAGACGT+TGG + chr7.3:80530007-80530026 MS.gene75978:CDS 55.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 80529693 80530223 80529693 ID=MS.gene75978
chr7.3 mRNA 80529693 80530223 80529693 ID=MS.gene75978.t1;Parent=MS.gene75978
chr7.3 exon 80529693 80530223 80529693 ID=MS.gene75978.t1.exon1;Parent=MS.gene75978.t1
chr7.3 CDS 80529693 80530223 80529693 ID=cds.MS.gene75978.t1;Parent=MS.gene75978.t1
Gene Sequence

>MS.gene75978

ATGGATATGGTTAACCAAAGAAAGAAGAACATGGGGCGCCAGAAGATTGAGATCAAGAAGGTTGAGAAAGATTCCAACAAACTTGTCACTTTCTCAAAAAGAAGACAAGGTTTATTCAGAAAAGCAAGCGAACTTTGTGTCTTATGTGATGTTCATGCAGCCATCATTGTGTTTTCCCCTGGTGACAAACTTTACTGTTTTGGTCAACCCGACACTAACGTTGTCCTCAATAGCTACGTCAAAGGAACCACTGAGTTTGAGGATTCAAAGTCAACTGAAAATTTTCCGACTTGCAAAGATTACAATAGACAATATGAGGAGGCGCAAAAGACGTTGGAGACGGAAAAGAAGAAACTAGAAGATGTTCAAATTATGGCTAAGATTTTCAACAAGGGTGACTGGTGGAATGATTCAATTGATGATATGAGTAGTGATCAACTTGAACAATTTATGGTGTCCATTTACGAGTTAAGGAGGAAGCTTGTTGAAAGGGCTGATGAACTTGTCATGAAGCAAAGTGTCATGCCCTAG
Protein sequence

>MS.gene75978.t1

MDMVNQRKKNMGRQKIEIKKVEKDSNKLVTFSKRRQGLFRKASELCVLCDVHAAIIVFSPGDKLYCFGQPDTNVVLNSYVKGTTEFEDSKSTENFPTCKDYNRQYEEAQKTLETEKKKLEDVQIMAKIFNKGDWWNDSIDDMSSDQLEQFMVSIYELRRKLVERADELVMKQSVMP