Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76381.t1 | XP_024629013.1 | 94.6 | 523 | 22 | 2 | 1 | 521 | 1 | 519 | 2.60E-237 | 831.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76381.t1 | Q9SCQ6 | 52.3 | 528 | 161 | 11 | 2 | 519 | 3 | 449 | 1.7e-125 | 451.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76381.t1 | A0A396GNR0 | 94.6 | 523 | 22 | 2 | 1 | 521 | 1 | 519 | 1.8e-237 | 831.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene76381.t1 | TF | C2H2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76381.t1 | MTR_2g099990 | 75.120 | 209 | 36 | 1 | 4 | 196 | 1 | 209 | 1.41e-117 | 355 |
MS.gene76381.t1 | MTR_8g017210 | 76.077 | 209 | 35 | 2 | 3 | 196 | 17 | 225 | 4.95e-117 | 355 |
MS.gene76381.t1 | MTR_4g059870 | 76.842 | 190 | 39 | 2 | 11 | 195 | 12 | 201 | 4.01e-111 | 339 |
MS.gene76381.t1 | MTR_1g094115 | 85.185 | 162 | 24 | 0 | 31 | 192 | 45 | 206 | 9.07e-109 | 335 |
MS.gene76381.t1 | MTR_1g016010 | 85.366 | 164 | 23 | 1 | 32 | 194 | 40 | 203 | 4.01e-107 | 327 |
MS.gene76381.t1 | MTR_1g112270 | 83.439 | 157 | 26 | 0 | 36 | 192 | 47 | 203 | 4.25e-104 | 323 |
MS.gene76381.t1 | MTR_2g090745 | 88.235 | 153 | 18 | 0 | 43 | 195 | 17 | 169 | 2.52e-102 | 314 |
MS.gene76381.t1 | MTR_1g112270 | 77.976 | 168 | 26 | 1 | 36 | 192 | 47 | 214 | 2.22e-100 | 314 |
MS.gene76381.t1 | MTR_2g093960 | 77.576 | 165 | 36 | 1 | 32 | 195 | 31 | 195 | 9.10e-100 | 307 |
MS.gene76381.t1 | MTR_2g099990 | 88.571 | 140 | 16 | 0 | 57 | 196 | 1 | 140 | 5.32e-97 | 300 |
MS.gene76381.t1 | MTR_1g094115 | 75.926 | 162 | 22 | 1 | 31 | 192 | 45 | 189 | 1.33e-92 | 292 |
MS.gene76381.t1 | MTR_2g017720 | 81.739 | 115 | 16 | 1 | 43 | 157 | 323 | 432 | 3.60e-60 | 204 |
MS.gene76381.t1 | MTR_3g102000 | 72.727 | 99 | 20 | 2 | 60 | 154 | 36 | 131 | 9.19e-44 | 155 |
MS.gene76381.t1 | MTR_5g030560 | 84.444 | 45 | 7 | 0 | 43 | 87 | 16 | 60 | 2.85e-21 | 88.2 |
MS.gene76381.t1 | MTR_1g093095 | 33.117 | 154 | 88 | 5 | 56 | 196 | 109 | 260 | 6.33e-18 | 84.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76381.t1 | AT3G50700 | 55.854 | 521 | 153 | 13 | 2 | 519 | 3 | 449 | 1.96e-179 | 512 |
MS.gene76381.t1 | AT5G66730 | 58.071 | 539 | 166 | 15 | 2 | 521 | 3 | 500 | 9.18e-179 | 512 |
MS.gene76381.t1 | AT1G03840 | 86.228 | 167 | 23 | 0 | 29 | 195 | 37 | 203 | 3.00e-111 | 340 |
MS.gene76381.t1 | AT5G44160 | 78.351 | 194 | 40 | 1 | 4 | 195 | 6 | 199 | 6.41e-111 | 338 |
MS.gene76381.t1 | AT1G55110 | 70.507 | 217 | 49 | 5 | 3 | 204 | 20 | 236 | 2.79e-108 | 330 |
MS.gene76381.t1 | AT1G55110 | 70.507 | 217 | 49 | 5 | 3 | 204 | 20 | 236 | 2.79e-108 | 330 |
MS.gene76381.t1 | AT1G55110 | 70.507 | 217 | 49 | 5 | 3 | 204 | 20 | 236 | 2.79e-108 | 330 |
MS.gene76381.t1 | AT1G03840 | 85.030 | 167 | 23 | 1 | 29 | 195 | 37 | 201 | 5.41e-108 | 332 |
MS.gene76381.t1 | AT3G13810 | 70.233 | 215 | 42 | 2 | 3 | 195 | 19 | 233 | 1.93e-106 | 328 |
MS.gene76381.t1 | AT3G13810 | 70.233 | 215 | 42 | 2 | 3 | 195 | 19 | 233 | 1.93e-106 | 328 |
MS.gene76381.t1 | AT3G13810 | 70.233 | 215 | 42 | 2 | 3 | 195 | 14 | 228 | 1.96e-106 | 327 |
MS.gene76381.t1 | AT3G13810 | 70.561 | 214 | 41 | 2 | 4 | 195 | 1 | 214 | 2.58e-106 | 327 |
MS.gene76381.t1 | AT2G02080 | 78.916 | 166 | 35 | 0 | 31 | 196 | 52 | 217 | 3.11e-106 | 327 |
MS.gene76381.t1 | AT2G02080 | 78.916 | 166 | 35 | 0 | 31 | 196 | 52 | 217 | 3.11e-106 | 327 |
MS.gene76381.t1 | AT2G02080 | 78.916 | 166 | 35 | 0 | 31 | 196 | 52 | 217 | 3.11e-106 | 327 |
MS.gene76381.t1 | AT2G02080 | 78.916 | 166 | 35 | 0 | 31 | 196 | 52 | 217 | 3.11e-106 | 327 |
MS.gene76381.t1 | AT4G02670 | 73.737 | 198 | 42 | 3 | 8 | 195 | 21 | 218 | 1.39e-105 | 322 |
MS.gene76381.t1 | AT4G02670 | 73.737 | 198 | 42 | 3 | 8 | 195 | 19 | 216 | 1.64e-105 | 322 |
MS.gene76381.t1 | AT1G14580 | 76.608 | 171 | 40 | 0 | 26 | 196 | 46 | 216 | 3.24e-105 | 323 |
MS.gene76381.t1 | AT1G14580 | 76.608 | 171 | 40 | 0 | 26 | 196 | 46 | 216 | 3.24e-105 | 323 |
MS.gene76381.t1 | AT1G14580 | 76.608 | 171 | 40 | 0 | 26 | 196 | 60 | 230 | 8.26e-105 | 322 |
MS.gene76381.t1 | AT5G03150 | 74.872 | 195 | 41 | 3 | 33 | 219 | 53 | 247 | 8.76e-105 | 323 |
MS.gene76381.t1 | AT3G45260 | 81.098 | 164 | 30 | 1 | 33 | 195 | 39 | 202 | 4.01e-104 | 320 |
MS.gene76381.t1 | AT3G45260 | 81.098 | 164 | 30 | 1 | 33 | 195 | 39 | 202 | 4.01e-104 | 320 |
MS.gene76381.t1 | AT5G44160 | 88.235 | 153 | 18 | 0 | 43 | 195 | 8 | 160 | 7.11e-103 | 316 |
MS.gene76381.t1 | AT2G02070 | 80.368 | 163 | 32 | 0 | 33 | 195 | 52 | 214 | 8.50e-103 | 321 |
MS.gene76381.t1 | AT2G02070 | 80.368 | 163 | 32 | 0 | 33 | 195 | 52 | 214 | 8.50e-103 | 321 |
MS.gene76381.t1 | AT5G60470 | 77.246 | 167 | 37 | 1 | 30 | 195 | 41 | 207 | 2.25e-100 | 310 |
MS.gene76381.t1 | AT5G60470 | 77.246 | 167 | 37 | 1 | 30 | 195 | 37 | 203 | 3.31e-100 | 310 |
MS.gene76381.t1 | AT3G13810 | 87.582 | 153 | 18 | 1 | 44 | 195 | 68 | 220 | 6.34e-99 | 308 |
MS.gene76381.t1 | AT3G13810 | 87.582 | 153 | 18 | 1 | 44 | 195 | 82 | 234 | 9.06e-99 | 308 |
MS.gene76381.t1 | AT5G60470 | 70.520 | 173 | 50 | 1 | 24 | 195 | 26 | 198 | 2.63e-94 | 294 |
MS.gene76381.t1 | AT2G02080 | 80.714 | 140 | 27 | 0 | 57 | 196 | 1 | 140 | 1.42e-91 | 287 |
MS.gene76381.t1 | AT2G02080 | 80.714 | 140 | 27 | 0 | 57 | 196 | 1 | 140 | 1.42e-91 | 287 |
MS.gene76381.t1 | AT1G25250 | 68.153 | 157 | 47 | 2 | 33 | 186 | 33 | 189 | 3.23e-75 | 243 |
MS.gene76381.t1 | AT1G68130 | 67.308 | 156 | 49 | 2 | 33 | 186 | 41 | 196 | 2.46e-74 | 241 |
MS.gene76381.t1 | AT2G01940 | 65.190 | 158 | 53 | 2 | 33 | 188 | 44 | 201 | 1.66e-73 | 240 |
MS.gene76381.t1 | AT1G25250 | 68.456 | 149 | 44 | 2 | 41 | 186 | 18 | 166 | 8.56e-72 | 233 |
MS.gene76381.t1 | AT2G01940 | 63.522 | 159 | 55 | 3 | 33 | 188 | 44 | 202 | 3.19e-69 | 229 |
MS.gene76381.t1 | AT1G25250 | 67.568 | 111 | 33 | 2 | 79 | 186 | 1 | 111 | 1.04e-47 | 168 |
MS.gene76381.t1 | AT1G68130 | 65.455 | 110 | 36 | 2 | 79 | 186 | 1 | 110 | 1.63e-46 | 166 |
MS.gene76381.t1 | AT2G01940 | 64.286 | 112 | 38 | 2 | 79 | 188 | 1 | 112 | 2.32e-46 | 166 |
MS.gene76381.t1 | AT5G22890 | 34.000 | 150 | 85 | 3 | 47 | 182 | 202 | 351 | 3.87e-23 | 101 |
MS.gene76381.t1 | AT1G34370 | 33.962 | 159 | 91 | 3 | 41 | 185 | 13 | 171 | 5.58e-23 | 99.4 |
MS.gene76381.t1 | AT1G34370 | 33.962 | 159 | 91 | 3 | 41 | 185 | 223 | 381 | 9.40e-23 | 102 |
MS.gene76381.t1 | AT1G34370 | 33.962 | 159 | 91 | 3 | 41 | 185 | 223 | 381 | 9.40e-23 | 102 |
MS.gene76381.t1 | AT1G13290 | 36.986 | 146 | 80 | 6 | 56 | 190 | 95 | 239 | 3.65e-19 | 88.6 |
MS.gene76381.t1 | AT1G34790 | 34.667 | 150 | 88 | 4 | 45 | 185 | 128 | 276 | 2.40e-17 | 83.2 |
MS.gene76381.t1 | AT1G51220 | 33.094 | 139 | 83 | 4 | 56 | 185 | 172 | 309 | 3.07e-17 | 83.6 |
MS.gene76381.t1 | AT3G57670 | 30.588 | 170 | 100 | 5 | 56 | 208 | 211 | 379 | 3.24e-17 | 84.0 |
MS.gene76381.t1 | AT3G20880 | 33.813 | 139 | 82 | 4 | 56 | 185 | 250 | 387 | 6.10e-17 | 83.6 |
MS.gene76381.t1 | AT1G08290 | 36.296 | 135 | 75 | 4 | 61 | 185 | 179 | 312 | 9.84e-17 | 82.0 |
Find 121 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCCTTGTGACGGCGATTC+TGG | 0.135600 | 8.1:+30046886 | MS.gene76381:CDS |
TTGTGGTTCCTCTATGATTT+GGG | 0.227141 | 8.1:-30046332 | None:intergenic |
CATGATCCTTCTAGAGCTTT+AGG | 0.245902 | 8.1:+30045198 | MS.gene76381:CDS |
TAATTTGTACCTGGCATTCC+TGG | 0.277575 | 8.1:-30044890 | None:intergenic |
CTTGTGGTTCCTCTATGATT+TGG | 0.282265 | 8.1:-30046333 | None:intergenic |
GCCTCTCTGCTTCGTGGGCT+TGG | 0.294449 | 8.1:+30046748 | MS.gene76381:CDS |
AGAGCTTTAGGTGATTTAAC+TGG | 0.295896 | 8.1:+30045210 | MS.gene76381:CDS |
AAAGATCAAGTAAAGAAATT+AGG | 0.296295 | 8.1:+30045136 | MS.gene76381:CDS |
GACAATGTTTCCACAGCTTC+AGG | 0.299307 | 8.1:+30044788 | MS.gene76381:CDS |
GGACTAAAGGAATTGATGTT+AGG | 0.301999 | 8.1:+30046907 | MS.gene76381:CDS |
AGATTGAACAGCATATTTCT+TGG | 0.304180 | 8.1:-30045292 | None:intergenic |
CGGCGTTCAGCGACCTAATT+AGG | 0.320982 | 8.1:+30046512 | MS.gene76381:CDS |
CTAGGATTGGGGATGGCTGC+TGG | 0.321231 | 8.1:+30046973 | MS.gene76381:CDS |
ACTCTTGATTTCCTAGGATT+GGG | 0.333570 | 8.1:+30046961 | MS.gene76381:CDS |
TACATCCCATGGACCTAATT+AGG | 0.343619 | 8.1:-30046525 | None:intergenic |
AACTCTTGATTTCCTAGGAT+TGG | 0.365068 | 8.1:+30046960 | MS.gene76381:CDS |
AGAGCAATCACCTCTGCTTC+TGG | 0.372321 | 8.1:-30044991 | None:intergenic |
GAGTTCTCTGGCAAAGATAT+TGG | 0.378609 | 8.1:+30047093 | MS.gene76381:CDS |
CAAGTAAAGAAATTAGGAAA+AGG | 0.395504 | 8.1:+30045142 | MS.gene76381:CDS |
ATGGCTGCTGGTGGTAGTGC+CGG | 0.397095 | 8.1:+30046985 | MS.gene76381:CDS |
TCTTCTGCTTCTACTTCATC+TGG | 0.406999 | 8.1:+30046781 | MS.gene76381:CDS |
CAGACAACTCTTGATTTCCT+AGG | 0.415465 | 8.1:+30046955 | MS.gene76381:CDS |
GATAGCCTGCATTGGGGTCT+CGG | 0.418830 | 8.1:+30046811 | MS.gene76381:CDS |
TTAGGGACTCCGTCAATGTT+TGG | 0.420641 | 8.1:+30046925 | MS.gene76381:CDS |
AATATGCTGTTCAATCTGAT+TGG | 0.427517 | 8.1:+30045298 | MS.gene76381:CDS |
GAAAATTGATGATCCATGAT+TGG | 0.434295 | 8.1:-30046614 | None:intergenic |
ACCGCAGCAGCCGCATCCTT+CGG | 0.436819 | 8.1:+30047063 | MS.gene76381:CDS |
AAAGCTCACTCTAAAGTTTG+TGG | 0.439997 | 8.1:+30045321 | MS.gene76381:CDS |
AAGTAAAGAAATTAGGAAAA+GGG | 0.440652 | 8.1:+30045143 | MS.gene76381:CDS |
CTTTGCCTCTCGACCAATCA+TGG | 0.452274 | 8.1:+30046601 | MS.gene76381:CDS |
GCATTGGGGTCTCGGACAAA+TGG | 0.453208 | 8.1:+30046819 | MS.gene76381:CDS |
TTTGTTGCTAACAACGTTGT+TGG | 0.453429 | 8.1:-30045018 | None:intergenic |
GTTTCAGCAGGACTCGGACT+AGG | 0.454067 | 8.1:+30046862 | MS.gene76381:CDS |
AATTGGCGGTGGCAGTGGTC+TGG | 0.454398 | 8.1:+30047035 | MS.gene76381:CDS |
TCAACAAGATAGCCTGCATT+GGG | 0.455422 | 8.1:+30046804 | MS.gene76381:CDS |
GGTTCTAGTTTAGTTTCAGC+AGG | 0.456585 | 8.1:+30046850 | MS.gene76381:CDS |
TGATGAACACAAGTTGGTTC+AGG | 0.461372 | 8.1:-30045177 | None:intergenic |
GATCTTTGTCTCAGTTTCCA+TGG | 0.464582 | 8.1:-30045120 | None:intergenic |
TCTGCACTTATCACATCAAT+TGG | 0.468012 | 8.1:+30047018 | MS.gene76381:CDS |
TAGTGGTGTGTCCTCTGCTT+TGG | 0.468292 | 8.1:+30045694 | MS.gene76381:CDS |
AAATCACCTAAAGCTCTAGA+AGG | 0.470379 | 8.1:-30045204 | None:intergenic |
ACATCAATTGGCGGTGGCAG+TGG | 0.474797 | 8.1:+30047030 | MS.gene76381:CDS |
TTCGAAGCCGGTGTCGATGC+CGG | 0.475053 | 8.1:+30045628 | MS.gene76381:CDS |
GCTGATGTGTTGGCACGTAT+TGG | 0.475745 | 8.1:-30046660 | None:intergenic |
ATCGCAGGCGGCTGATGTGT+TGG | 0.478292 | 8.1:-30046670 | None:intergenic |
GCAGCCGCATCCTTCGGTAA+TGG | 0.482125 | 8.1:+30047069 | MS.gene76381:CDS |
AAATCAAGAGTTGTCTGCTT+AGG | 0.482911 | 8.1:-30046949 | None:intergenic |
CAGAGAGGCGTTTGTTGCAG+CGG | 0.485928 | 8.1:-30046734 | None:intergenic |
AGTTTAGTTTCAGCAGGACT+CGG | 0.486435 | 8.1:+30046856 | MS.gene76381:CDS |
GACTAAAGGAATTGATGTTA+GGG | 0.488496 | 8.1:+30046908 | MS.gene76381:CDS |
ACAAACGCCTCTCTGCTTCG+TGG | 0.490619 | 8.1:+30046742 | MS.gene76381:CDS |
TTCGGTAATGGAGAGTTCTC+TGG | 0.494928 | 8.1:+30047081 | MS.gene76381:CDS |
AGAAATCTCCCAGGAATGCC+AGG | 0.500143 | 8.1:+30044881 | MS.gene76381:CDS |
CAGCGACCTAATTAGGTCCA+TGG | 0.501360 | 8.1:+30046519 | MS.gene76381:CDS |
TTCTGCGAGTCTCCAACCTC+AGG | 0.501471 | 8.1:+30046486 | MS.gene76381:CDS |
GGCTGTGCTACTACCAGCAC+TGG | 0.506941 | 8.1:+30046424 | MS.gene76381:CDS |
CAGCAGCCATCCCCAATCCT+AGG | 0.507214 | 8.1:-30046972 | None:intergenic |
TCGCTGAACGCCGGTGCCTG+AGG | 0.511411 | 8.1:-30046502 | None:intergenic |
GTCAACAAGATAGCCTGCAT+TGG | 0.514883 | 8.1:+30046803 | MS.gene76381:CDS |
ACATTGTCTAAATCAACCAT+TGG | 0.516475 | 8.1:-30044773 | None:intergenic |
AATTTGTACCTGGCATTCCT+GGG | 0.519747 | 8.1:-30044889 | None:intergenic |
TGAACGCCGGTGCCTGAGGT+TGG | 0.520285 | 8.1:-30046498 | None:intergenic |
CAAACGCCTCTCTGCTTCGT+GGG | 0.520664 | 8.1:+30046743 | MS.gene76381:CDS |
TAATTCAGAATCTGATTCAA+AGG | 0.520820 | 8.1:+30045592 | MS.gene76381:CDS |
AATGCAGTGGCAGACATCGC+AGG | 0.522789 | 8.1:-30046685 | None:intergenic |
GCTCGCAAACACGCCAGTGC+TGG | 0.524696 | 8.1:-30046437 | None:intergenic |
GAAGCTAGCATCTCTTCCTC+TGG | 0.524982 | 8.1:+30044812 | MS.gene76381:CDS |
TGATTTCCTAGGATTGGGGA+TGG | 0.525019 | 8.1:+30046966 | MS.gene76381:CDS |
AGAGAGATCGCCTCGGACGA+TGG | 0.526923 | 8.1:-30046580 | None:intergenic |
ACTACTCCTCAGTCAAATAG+TGG | 0.528176 | 8.1:+30045677 | MS.gene76381:CDS |
CTCTTGATTTCCTAGGATTG+GGG | 0.537741 | 8.1:+30046962 | MS.gene76381:CDS |
GAGCTTTAGGTGATTTAACT+GGG | 0.546954 | 8.1:+30045211 | MS.gene76381:CDS |
TTTGACCGGTGATTCGAAGC+CGG | 0.547642 | 8.1:+30045616 | MS.gene76381:CDS |
CGACACCGGCTTCGAATCAC+CGG | 0.547911 | 8.1:-30045621 | None:intergenic |
TGCTTAGGACCAAACATTGA+CGG | 0.548417 | 8.1:-30046934 | None:intergenic |
GCTGGTGGTAGTGCCGGTGG+AGG | 0.548542 | 8.1:+30046991 | MS.gene76381:CDS |
TGACGGCGATTCTGGACTAA+AGG | 0.548568 | 8.1:+30046894 | MS.gene76381:CDS |
GCTGCTGGTGGTAGTGCCGG+TGG | 0.551709 | 8.1:+30046988 | MS.gene76381:CDS |
ACCGAAGGATGCGGCTGCTG+CGG | 0.555962 | 8.1:-30047064 | None:intergenic |
TTTGTCCGAGACCCCAATGC+AGG | 0.560302 | 8.1:-30046816 | None:intergenic |
GGATCATGATGAACACAAGT+TGG | 0.562485 | 8.1:-30045183 | None:intergenic |
AGAGAGTATAAATGTGATTG+TGG | 0.563676 | 8.1:+30045348 | MS.gene76381:CDS |
TGTGGTTCCTCTATGATTTG+GGG | 0.567711 | 8.1:-30046331 | None:intergenic |
GTGTGTGAAATATGTAACAA+AGG | 0.568738 | 8.1:+30045048 | MS.gene76381:CDS |
CTCTCCATTACCGAAGGATG+CGG | 0.569694 | 8.1:-30047073 | None:intergenic |
AGCGACCTAATTAGGTCCAT+GGG | 0.573274 | 8.1:+30046520 | MS.gene76381:CDS |
GCACTTATCACATCAATTGG+CGG | 0.574617 | 8.1:+30047021 | MS.gene76381:CDS |
GCTAGCTTCACCTGAAGCTG+TGG | 0.576380 | 8.1:-30044798 | None:intergenic |
GGTTCCTCTATGATTTGGGG+TGG | 0.577325 | 8.1:-30046328 | None:intergenic |
ATCACCGCCGGCATCGACAC+CGG | 0.580859 | 8.1:-30045635 | None:intergenic |
TTGAATATTGTTATTACCAG+AGG | 0.581923 | 8.1:-30044828 | None:intergenic |
AATCTTCAACTACATAGAAG+AGG | 0.593928 | 8.1:+30045087 | MS.gene76381:CDS |
AGTCCAGAATCGCCGTCACA+AGG | 0.597637 | 8.1:-30046889 | None:intergenic |
CTCAGCTCCTCCATCGTCCG+AGG | 0.601921 | 8.1:+30046570 | MS.gene76381:CDS |
GGATTGGGGATGGCTGCTGG+TGG | 0.602431 | 8.1:+30046976 | MS.gene76381:CDS |
GGAGGAGCTGAGAAATCTGA+AGG | 0.603033 | 8.1:-30046559 | None:intergenic |
CTAATTAGGTCGCTGAACGC+CGG | 0.604617 | 8.1:-30046511 | None:intergenic |
AAGTGCAGACAAGCCTCCAC+CGG | 0.604756 | 8.1:-30047004 | None:intergenic |
AAATCCACCCCAAATCATAG+AGG | 0.606558 | 8.1:+30046324 | MS.gene76381:CDS |
GCTTTGGAGACTCAGAAGCT+AGG | 0.609936 | 8.1:+30045710 | MS.gene76381:CDS |
ATGATCCATGATTGGTCGAG+AGG | 0.611193 | 8.1:-30046606 | None:intergenic |
ACGAGGATCTGTACATCCCA+TGG | 0.612346 | 8.1:-30046536 | None:intergenic |
CTTATCACATCAATTGGCGG+TGG | 0.618131 | 8.1:+30047024 | MS.gene76381:CDS |
GAAGAGGACATAATCTACCA+TGG | 0.626841 | 8.1:+30045103 | MS.gene76381:CDS |
GAGTCTCCAACCTCAGGCAC+CGG | 0.629519 | 8.1:+30046492 | MS.gene76381:CDS |
AGTACTAGCTCAACAAGCAA+CGG | 0.630248 | 8.1:+30046403 | MS.gene76381:CDS |
GCTGAGAAATCTGAAGGACG+AGG | 0.632449 | 8.1:-30046553 | None:intergenic |
GAGATCGCCTCGGACGATGG+AGG | 0.640921 | 8.1:-30046577 | None:intergenic |
GCAGTGGCAGACATCGCAGG+CGG | 0.644182 | 8.1:-30046682 | None:intergenic |
AGAGAACTCTCCATTACCGA+AGG | 0.648524 | 8.1:-30047079 | None:intergenic |
GAAGCCGGTGTCGATGCCGG+CGG | 0.649310 | 8.1:+30045631 | MS.gene76381:CDS |
CTCGGACAAATGGAAACAGA+GGG | 0.658271 | 8.1:+30046829 | MS.gene76381:CDS |
GCAGTAGTAGTAATCACCGC+CGG | 0.670061 | 8.1:-30045647 | None:intergenic |
GAGGCAAAGAGAGATCGCCT+CGG | 0.672821 | 8.1:-30046587 | None:intergenic |
TCTCGGACAAATGGAAACAG+AGG | 0.673384 | 8.1:+30046828 | MS.gene76381:CDS |
CTTCTGAGTCTCCAAAGCAG+AGG | 0.681133 | 8.1:-30045705 | None:intergenic |
TCCAAGCCCACGAAGCAGAG+AGG | 0.693629 | 8.1:-30046749 | None:intergenic |
CAACAAGATAGCCTGCATTG+GGG | 0.703664 | 8.1:+30046805 | MS.gene76381:CDS |
GGACTAGGTCTTCCTTGTGA+CGG | 0.715099 | 8.1:+30046877 | MS.gene76381:CDS |
GACACACCACTATTTGACTG+AGG | 0.723609 | 8.1:-30045683 | None:intergenic |
GTAGTAGTAACAACAACTTG+TGG | 0.766984 | 8.1:-30046349 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTAAATTTTTATTTT+TGG | + | chr8.1:30045392-30045411 | MS.gene76381:intron | 0.0% |
!! | AAAAATCAAAATATAGAATA+AGG | - | chr8.1:30046290-30046309 | None:intergenic | 10.0% |
!! | TTTATATGTTTATGAAAAAT+GGG | + | chr8.1:30045431-30045450 | MS.gene76381:intron | 10.0% |
!!! | TTTTATATGTTTATGAAAAA+TGG | + | chr8.1:30045430-30045449 | MS.gene76381:intron | 10.0% |
!! | AAATTTAATAAAAAAGAACC+TGG | - | chr8.1:30045385-30045404 | None:intergenic | 15.0% |
!! | AATTATAATCATCAACTAAT+AGG | - | chr8.1:30046221-30046240 | None:intergenic | 15.0% |
!! | ATTATAATCATCAACTAATA+GGG | - | chr8.1:30046220-30046239 | None:intergenic | 15.0% |
!! | TTTAATGTAACATAAAAGAA+AGG | + | chr8.1:30046141-30046160 | MS.gene76381:intron | 15.0% |
!!! | AATATTTATTAATTTGTACC+TGG | - | chr8.1:30044902-30044921 | None:intergenic | 15.0% |
!!! | CAAATTCAAAATTTTGTTTT+TGG | + | chr8.1:30045842-30045861 | MS.gene76381:intron | 15.0% |
!! | AAAGATCAAGTAAAGAAATT+AGG | + | chr8.1:30045136-30045155 | MS.gene76381:CDS | 20.0% |
!! | AAGTAAAGAAATTAGGAAAA+GGG | + | chr8.1:30045143-30045162 | MS.gene76381:CDS | 20.0% |
!! | TGAAAATAAATCCCTTAAAA+AGG | + | chr8.1:30045992-30046011 | MS.gene76381:intron | 20.0% |
!!! | TACAAAAAACACCTTTTTAA+GGG | - | chr8.1:30046006-30046025 | None:intergenic | 20.0% |
!!! | TTACAAAAAACACCTTTTTA+AGG | - | chr8.1:30046007-30046026 | None:intergenic | 20.0% |
!!! | TTTTATGTGTTTGATTTTGA+AGG | + | chr8.1:30045483-30045502 | MS.gene76381:intron | 20.0% |
! | AAAAAAGAACCTGGAAAAAA+CGG | - | chr8.1:30045376-30045395 | None:intergenic | 25.0% |
! | CAAGTAAAGAAATTAGGAAA+AGG | + | chr8.1:30045142-30045161 | MS.gene76381:CDS | 25.0% |
! | GTTTGATCTAAATTATGCAT+TGG | + | chr8.1:30046029-30046048 | MS.gene76381:intron | 25.0% |
! | TAATTCAGAATCTGATTCAA+AGG | + | chr8.1:30045592-30045611 | MS.gene76381:CDS | 25.0% |
!! | AATCATGGATCATCAATTTT+CGG | + | chr8.1:30046616-30046635 | MS.gene76381:CDS | 25.0% |
!! | TTGAATATTGTTATTACCAG+AGG | - | chr8.1:30044831-30044850 | None:intergenic | 25.0% |
!!! | AAAGTGCAATTTTTGTTTAC+TGG | + | chr8.1:30045765-30045784 | MS.gene76381:intron | 25.0% |
!!! | AAGTGCAATTTTTGTTTACT+GGG | + | chr8.1:30045766-30045785 | MS.gene76381:intron | 25.0% |
!!! | AGAAGATTTGTTTTTAAGAG+TGG | + | chr8.1:30046080-30046099 | MS.gene76381:intron | 25.0% |
!!! | AGATTTCTTTTTTTCTTGGT+GGG | - | chr8.1:30044869-30044888 | None:intergenic | 25.0% |
!!! | GTGTTTAGTATTTTTTTGTC+TGG | + | chr8.1:30045891-30045910 | MS.gene76381:intron | 25.0% |
!!! | TTTTTTTGTCATGTTTGATG+CGG | + | chr8.1:30045802-30045821 | MS.gene76381:intron | 25.0% |
AACACATAGACAAGTAAAGT+TGG | - | chr8.1:30046169-30046188 | None:intergenic | 30.0% | |
AAGAAAAAAAGAAATCTCCC+AGG | + | chr8.1:30044872-30044891 | MS.gene76381:CDS | 30.0% | |
AATATGCTGTTCAATCTGAT+TGG | + | chr8.1:30045298-30045317 | MS.gene76381:CDS | 30.0% | |
AATCTTCAACTACATAGAAG+AGG | + | chr8.1:30045087-30045106 | MS.gene76381:CDS | 30.0% | |
AGATTGAACAGCATATTTCT+TGG | - | chr8.1:30045295-30045314 | None:intergenic | 30.0% | |
ATTGTTTGTTTATGTGGTCT+TGG | + | chr8.1:30045869-30045888 | MS.gene76381:intron | 30.0% | |
GACTAAAGGAATTGATGTTA+GGG | + | chr8.1:30046908-30046927 | MS.gene76381:CDS | 30.0% | |
GTGTGTGAAATATGTAACAA+AGG | + | chr8.1:30045048-30045067 | MS.gene76381:CDS | 30.0% | |
! | AAGCACTTTTGTAGAAAACA+TGG | + | chr8.1:30045240-30045259 | MS.gene76381:CDS | 30.0% |
! | AGAGAGTATAAATGTGATTG+TGG | + | chr8.1:30045348-30045367 | MS.gene76381:CDS | 30.0% |
! | GAAAATTGATGATCCATGAT+TGG | - | chr8.1:30046617-30046636 | None:intergenic | 30.0% |
!! | AAATTATGCATTGGTTGTCA+AGG | + | chr8.1:30046038-30046057 | MS.gene76381:intron | 30.0% |
!! | ATGTGTTTGATTTTGAAGGA+GGG | + | chr8.1:30045487-30045506 | MS.gene76381:intron | 30.0% |
!! | GGTGTTATTGTTTGTTTATG+TGG | + | chr8.1:30045863-30045882 | MS.gene76381:intron | 30.0% |
!! | TATGTGTTTGATTTTGAAGG+AGG | + | chr8.1:30045486-30045505 | MS.gene76381:intron | 30.0% |
!!! | GAGATTTCTTTTTTTCTTGG+TGG | - | chr8.1:30044870-30044889 | None:intergenic | 30.0% |
!!! | TGGGAGATTTCTTTTTTTCT+TGG | - | chr8.1:30044873-30044892 | None:intergenic | 30.0% |
AAATCAAGAGTTGTCTGCTT+AGG | - | chr8.1:30046952-30046971 | None:intergenic | 35.0% | |
AACTCTTGATTTCCTAGGAT+TGG | + | chr8.1:30046960-30046979 | MS.gene76381:CDS | 35.0% | |
ACTCTTGATTTCCTAGGATT+GGG | + | chr8.1:30046961-30046980 | MS.gene76381:CDS | 35.0% | |
ACTTCAAAAAGCAGCTCAAA+TGG | + | chr8.1:30046708-30046727 | MS.gene76381:CDS | 35.0% | |
ACTTGTCTATGTGTTATGAG+TGG | + | chr8.1:30046174-30046193 | MS.gene76381:intron | 35.0% | |
CTTCAAAAAGCAGCTCAAAT+GGG | + | chr8.1:30046709-30046728 | MS.gene76381:CDS | 35.0% | |
GAAAACATGGTGAGAAAAAG+TGG | + | chr8.1:30045253-30045272 | MS.gene76381:CDS | 35.0% | |
GGACTAAAGGAATTGATGTT+AGG | + | chr8.1:30046907-30046926 | MS.gene76381:CDS | 35.0% | |
GTAGTAGTAACAACAACTTG+TGG | - | chr8.1:30046352-30046371 | None:intergenic | 35.0% | |
TCTGCACTTATCACATCAAT+TGG | + | chr8.1:30047018-30047037 | MS.gene76381:CDS | 35.0% | |
TTGTGGTTCCTCTATGATTT+GGG | - | chr8.1:30046335-30046354 | None:intergenic | 35.0% | |
TTTGTTGCTAACAACGTTGT+TGG | - | chr8.1:30045021-30045040 | None:intergenic | 35.0% | |
!! | AAAGCTCACTCTAAAGTTTG+TGG | + | chr8.1:30045321-30045340 | MS.gene76381:CDS | 35.0% |
!! | AAATCACCTAAAGCTCTAGA+AGG | - | chr8.1:30045207-30045226 | None:intergenic | 35.0% |
!! | AGAGCTTTAGGTGATTTAAC+TGG | + | chr8.1:30045210-30045229 | MS.gene76381:CDS | 35.0% |
!! | GAGCTTTAGGTGATTTAACT+GGG | + | chr8.1:30045211-30045230 | MS.gene76381:CDS | 35.0% |
!! | TCTGATTCAAAGGTTTTGAC+CGG | + | chr8.1:30045602-30045621 | MS.gene76381:CDS | 35.0% |
!!! | CTTTTTTTCTTGGTGGGTTT+TGG | - | chr8.1:30044863-30044882 | None:intergenic | 35.0% |
!!! | GACTTGTTTTTGTGAGAAAC+AGG | + | chr8.1:30045930-30045949 | MS.gene76381:intron | 35.0% |
!!! | TGCTTTTTGAAGTAATGCAG+TGG | - | chr8.1:30046701-30046720 | None:intergenic | 35.0% |
AAATCCACCCCAAATCATAG+AGG | + | chr8.1:30046324-30046343 | MS.gene76381:CDS | 40.0% | |
AAGGAAAAGCAAAGCAAAGC+AGG | - | chr8.1:30046271-30046290 | None:intergenic | 40.0% | |
AATTTGTACCTGGCATTCCT+GGG | - | chr8.1:30044892-30044911 | None:intergenic | 40.0% | |
ACTACTCCTCAGTCAAATAG+TGG | + | chr8.1:30045677-30045696 | MS.gene76381:CDS | 40.0% | |
AGTACTAGCTCAACAAGCAA+CGG | + | chr8.1:30046403-30046422 | MS.gene76381:CDS | 40.0% | |
CAGACAACTCTTGATTTCCT+AGG | + | chr8.1:30046955-30046974 | MS.gene76381:CDS | 40.0% | |
CTCTTGATTTCCTAGGATTG+GGG | + | chr8.1:30046962-30046981 | MS.gene76381:CDS | 40.0% | |
CTTGTGGTTCCTCTATGATT+TGG | - | chr8.1:30046336-30046355 | None:intergenic | 40.0% | |
GAAGAGGACATAATCTACCA+TGG | + | chr8.1:30045103-30045122 | MS.gene76381:CDS | 40.0% | |
GAGTTCTCTGGCAAAGATAT+TGG | + | chr8.1:30047093-30047112 | MS.gene76381:CDS | 40.0% | |
GATCTTTGTCTCAGTTTCCA+TGG | - | chr8.1:30045123-30045142 | None:intergenic | 40.0% | |
GCACTTATCACATCAATTGG+CGG | + | chr8.1:30047021-30047040 | MS.gene76381:CDS | 40.0% | |
GGATCATGATGAACACAAGT+TGG | - | chr8.1:30045186-30045205 | None:intergenic | 40.0% | |
TACATCCCATGGACCTAATT+AGG | - | chr8.1:30046528-30046547 | None:intergenic | 40.0% | |
TCAACAAGATAGCCTGCATT+GGG | + | chr8.1:30046804-30046823 | MS.gene76381:CDS | 40.0% | |
TCTTCTGCTTCTACTTCATC+TGG | + | chr8.1:30046781-30046800 | MS.gene76381:CDS | 40.0% | |
TGCTTAGGACCAAACATTGA+CGG | - | chr8.1:30046937-30046956 | None:intergenic | 40.0% | |
TGTGGTTCCTCTATGATTTG+GGG | - | chr8.1:30046334-30046353 | None:intergenic | 40.0% | |
! | AGTTTAGTTTCAGCAGGACT+CGG | + | chr8.1:30046856-30046875 | MS.gene76381:CDS | 40.0% |
! | ATCAAGTGATCTGAGATTCG+GGG | + | chr8.1:30045953-30045972 | MS.gene76381:intron | 40.0% |
! | CATCAATTTTCGGAACAGGA+GGG | + | chr8.1:30046626-30046645 | MS.gene76381:CDS | 40.0% |
! | GATCAAGTGATCTGAGATTC+GGG | + | chr8.1:30045952-30045971 | MS.gene76381:intron | 40.0% |
! | GGATCAAGTGATCTGAGATT+CGG | + | chr8.1:30045951-30045970 | MS.gene76381:intron | 40.0% |
! | GGATCATCAATTTTCGGAAC+AGG | + | chr8.1:30046622-30046641 | MS.gene76381:CDS | 40.0% |
! | TAATTTGTACCTGGCATTCC+TGG | - | chr8.1:30044893-30044912 | None:intergenic | 40.0% |
! | TAGAGCTTTTTGTGATGCGT+TGG | + | chr8.1:30045526-30045545 | MS.gene76381:CDS | 40.0% |
! | TCATCAATTTTCGGAACAGG+AGG | + | chr8.1:30046625-30046644 | MS.gene76381:CDS | 40.0% |
!! | ATGATTTGGGGTGGATTTTC+TGG | - | chr8.1:30046322-30046341 | None:intergenic | 40.0% |
!! | CATGATCCTTCTAGAGCTTT+AGG | + | chr8.1:30045198-30045217 | MS.gene76381:CDS | 40.0% |
!! | GGTTCTAGTTTAGTTTCAGC+AGG | + | chr8.1:30046850-30046869 | MS.gene76381:CDS | 40.0% |
!! | TGATGAACACAAGTTGGTTC+AGG | - | chr8.1:30045180-30045199 | None:intergenic | 40.0% |
!! | TTTTGAAGATCCAGAAGCAG+AGG | + | chr8.1:30044981-30045000 | MS.gene76381:intron | 40.0% |
!!! | ATTGTGGAACCGTTTTTTCC+AGG | + | chr8.1:30045364-30045383 | MS.gene76381:CDS | 40.0% |
!!! | TTCTTGGTGGGTTTTGGAAT+TGG | - | chr8.1:30044857-30044876 | None:intergenic | 40.0% |
AGAGAACTCTCCATTACCGA+AGG | - | chr8.1:30047082-30047101 | None:intergenic | 45.0% | |
AGCGACCTAATTAGGTCCAT+GGG | + | chr8.1:30046520-30046539 | MS.gene76381:CDS | 45.0% | |
CAACAAGATAGCCTGCATTG+GGG | + | chr8.1:30046805-30046824 | MS.gene76381:CDS | 45.0% | |
CTCGGACAAATGGAAACAGA+GGG | + | chr8.1:30046829-30046848 | MS.gene76381:CDS | 45.0% | |
CTTATCACATCAATTGGCGG+TGG | + | chr8.1:30047024-30047043 | MS.gene76381:CDS | 45.0% | |
GACAATGTTTCCACAGCTTC+AGG | + | chr8.1:30044788-30044807 | MS.gene76381:CDS | 45.0% | |
GACACACCACTATTTGACTG+AGG | - | chr8.1:30045686-30045705 | None:intergenic | 45.0% | |
GTCAACAAGATAGCCTGCAT+TGG | + | chr8.1:30046803-30046822 | MS.gene76381:CDS | 45.0% | |
TCTCGGACAAATGGAAACAG+AGG | + | chr8.1:30046828-30046847 | MS.gene76381:CDS | 45.0% | |
TGATTTCCTAGGATTGGGGA+TGG | + | chr8.1:30046966-30046985 | MS.gene76381:CDS | 45.0% | |
TTAGGGACTCCGTCAATGTT+TGG | + | chr8.1:30046925-30046944 | MS.gene76381:CDS | 45.0% | |
! | ATGATCCATGATTGGTCGAG+AGG | - | chr8.1:30046609-30046628 | None:intergenic | 45.0% |
!! | TTCGGTAATGGAGAGTTCTC+TGG | + | chr8.1:30047081-30047100 | MS.gene76381:CDS | 45.0% |
!! | TTTTTGTGATGCGTTGGCAG+AGG | + | chr8.1:30045532-30045551 | MS.gene76381:CDS | 45.0% |
ACGAGGATCTGTACATCCCA+TGG | - | chr8.1:30046539-30046558 | None:intergenic | 50.0% | |
AGAAATCTCCCAGGAATGCC+AGG | + | chr8.1:30044881-30044900 | MS.gene76381:CDS | 50.0% | |
AGAGCAATCACCTCTGCTTC+TGG | - | chr8.1:30044994-30045013 | None:intergenic | 50.0% | |
CAGCGACCTAATTAGGTCCA+TGG | + | chr8.1:30046519-30046538 | MS.gene76381:CDS | 50.0% | |
CTAATTAGGTCGCTGAACGC+CGG | - | chr8.1:30046514-30046533 | None:intergenic | 50.0% | |
CTCTCCATTACCGAAGGATG+CGG | - | chr8.1:30047076-30047095 | None:intergenic | 50.0% | |
CTTCTGAGTCTCCAAAGCAG+AGG | - | chr8.1:30045708-30045727 | None:intergenic | 50.0% | |
CTTTGCCTCTCGACCAATCA+TGG | + | chr8.1:30046601-30046620 | MS.gene76381:CDS | 50.0% | |
GAAGCTAGCATCTCTTCCTC+TGG | + | chr8.1:30044812-30044831 | MS.gene76381:CDS | 50.0% | |
GCAGTAGTAGTAATCACCGC+CGG | - | chr8.1:30045650-30045669 | None:intergenic | 50.0% | |
GCTGAGAAATCTGAAGGACG+AGG | - | chr8.1:30046556-30046575 | None:intergenic | 50.0% | |
GGACTAGGTCTTCCTTGTGA+CGG | + | chr8.1:30046877-30046896 | MS.gene76381:CDS | 50.0% | |
GGAGGAGCTGAGAAATCTGA+AGG | - | chr8.1:30046562-30046581 | None:intergenic | 50.0% | |
TAGTGGTGTGTCCTCTGCTT+TGG | + | chr8.1:30045694-30045713 | MS.gene76381:CDS | 50.0% | |
TGACGGCGATTCTGGACTAA+AGG | + | chr8.1:30046894-30046913 | MS.gene76381:CDS | 50.0% | |
TTTGACCGGTGATTCGAAGC+CGG | + | chr8.1:30045616-30045635 | MS.gene76381:CDS | 50.0% | |
! | AATTTTCGGAACAGGAGGGC+AGG | + | chr8.1:30046630-30046649 | MS.gene76381:CDS | 50.0% |
! | GCTGATGTGTTGGCACGTAT+TGG | - | chr8.1:30046663-30046682 | None:intergenic | 50.0% |
! | GGTTCCTCTATGATTTGGGG+TGG | - | chr8.1:30046331-30046350 | None:intergenic | 50.0% |
!! | GCTTTGGAGACTCAGAAGCT+AGG | + | chr8.1:30045710-30045729 | MS.gene76381:CDS | 50.0% |
AAGTGCAGACAAGCCTCCAC+CGG | - | chr8.1:30047007-30047026 | None:intergenic | 55.0% | |
AATGCAGTGGCAGACATCGC+AGG | - | chr8.1:30046688-30046707 | None:intergenic | 55.0% | |
ACAAACGCCTCTCTGCTTCG+TGG | + | chr8.1:30046742-30046761 | MS.gene76381:CDS | 55.0% | |
ACATCAATTGGCGGTGGCAG+TGG | + | chr8.1:30047030-30047049 | MS.gene76381:CDS | 55.0% | |
AGTCCAGAATCGCCGTCACA+AGG | - | chr8.1:30046892-30046911 | None:intergenic | 55.0% | |
CAAACGCCTCTCTGCTTCGT+GGG | + | chr8.1:30046743-30046762 | MS.gene76381:CDS | 55.0% | |
CGGCGTTCAGCGACCTAATT+AGG | + | chr8.1:30046512-30046531 | MS.gene76381:CDS | 55.0% | |
CTTCCTTGTGACGGCGATTC+TGG | + | chr8.1:30046886-30046905 | MS.gene76381:CDS | 55.0% | |
GAGGCAAAGAGAGATCGCCT+CGG | - | chr8.1:30046590-30046609 | None:intergenic | 55.0% | |
GATAGCCTGCATTGGGGTCT+CGG | + | chr8.1:30046811-30046830 | MS.gene76381:CDS | 55.0% | |
GCATTGGGGTCTCGGACAAA+TGG | + | chr8.1:30046819-30046838 | MS.gene76381:CDS | 55.0% | |
GTTTCAGCAGGACTCGGACT+AGG | + | chr8.1:30046862-30046881 | MS.gene76381:CDS | 55.0% | |
TTCTGCGAGTCTCCAACCTC+AGG | + | chr8.1:30046486-30046505 | MS.gene76381:CDS | 55.0% | |
TTTGTCCGAGACCCCAATGC+AGG | - | chr8.1:30046819-30046838 | None:intergenic | 55.0% | |
! | GCTAGCTTCACCTGAAGCTG+TGG | - | chr8.1:30044801-30044820 | None:intergenic | 55.0% |
!! | CAGAGAGGCGTTTGTTGCAG+CGG | - | chr8.1:30046737-30046756 | None:intergenic | 55.0% |
AATTGGCGGTGGCAGTGGTC+TGG | + | chr8.1:30047035-30047054 | MS.gene76381:CDS | 60.0% | |
AGAGAGATCGCCTCGGACGA+TGG | - | chr8.1:30046583-30046602 | None:intergenic | 60.0% | |
ATCGCAGGCGGCTGATGTGT+TGG | - | chr8.1:30046673-30046692 | None:intergenic | 60.0% | |
CAGCAGCCATCCCCAATCCT+AGG | - | chr8.1:30046975-30046994 | None:intergenic | 60.0% | |
CTAGGATTGGGGATGGCTGC+TGG | + | chr8.1:30046973-30046992 | MS.gene76381:CDS | 60.0% | |
GAGTCTCCAACCTCAGGCAC+CGG | + | chr8.1:30046492-30046511 | MS.gene76381:CDS | 60.0% | |
GCAGCCGCATCCTTCGGTAA+TGG | + | chr8.1:30047069-30047088 | MS.gene76381:CDS | 60.0% | |
TCCAAGCCCACGAAGCAGAG+AGG | - | chr8.1:30046752-30046771 | None:intergenic | 60.0% | |
! | ATGGCTGCTGGTGGTAGTGC+CGG | + | chr8.1:30046985-30047004 | MS.gene76381:CDS | 60.0% |
! | GGCTGTGCTACTACCAGCAC+TGG | + | chr8.1:30046424-30046443 | MS.gene76381:CDS | 60.0% |
!! | CGACACCGGCTTCGAATCAC+CGG | - | chr8.1:30045624-30045643 | None:intergenic | 60.0% |
!! | TTCGAAGCCGGTGTCGATGC+CGG | + | chr8.1:30045628-30045647 | MS.gene76381:CDS | 60.0% |
ACCGAAGGATGCGGCTGCTG+CGG | - | chr8.1:30047067-30047086 | None:intergenic | 65.0% | |
ACCGCAGCAGCCGCATCCTT+CGG | + | chr8.1:30047063-30047082 | MS.gene76381:CDS | 65.0% | |
CTCAGCTCCTCCATCGTCCG+AGG | + | chr8.1:30046570-30046589 | MS.gene76381:CDS | 65.0% | |
GAGATCGCCTCGGACGATGG+AGG | - | chr8.1:30046580-30046599 | None:intergenic | 65.0% | |
GCAGTGGCAGACATCGCAGG+CGG | - | chr8.1:30046685-30046704 | None:intergenic | 65.0% | |
GCCTCTCTGCTTCGTGGGCT+TGG | + | chr8.1:30046748-30046767 | MS.gene76381:CDS | 65.0% | |
GCTCGCAAACACGCCAGTGC+TGG | - | chr8.1:30046440-30046459 | None:intergenic | 65.0% | |
GGATTGGGGATGGCTGCTGG+TGG | + | chr8.1:30046976-30046995 | MS.gene76381:CDS | 65.0% | |
TGAACGCCGGTGCCTGAGGT+TGG | - | chr8.1:30046501-30046520 | None:intergenic | 65.0% | |
!! | ATCACCGCCGGCATCGACAC+CGG | - | chr8.1:30045638-30045657 | None:intergenic | 65.0% |
TCGCTGAACGCCGGTGCCTG+AGG | - | chr8.1:30046505-30046524 | None:intergenic | 70.0% | |
! | GCTGCTGGTGGTAGTGCCGG+TGG | + | chr8.1:30046988-30047007 | MS.gene76381:CDS | 70.0% |
!! | GAAGCCGGTGTCGATGCCGG+CGG | + | chr8.1:30045631-30045650 | MS.gene76381:CDS | 70.0% |
!! | GCTGGTGGTAGTGCCGGTGG+AGG | + | chr8.1:30046991-30047010 | MS.gene76381:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 30044776 | 30047128 | 30044776 | ID=MS.gene76381 |
chr8.1 | mRNA | 30044776 | 30047128 | 30044776 | ID=MS.gene76381.t1;Parent=MS.gene76381 |
chr8.1 | exon | 30044776 | 30044902 | 30044776 | ID=MS.gene76381.t1.exon1;Parent=MS.gene76381.t1 |
chr8.1 | CDS | 30044776 | 30044902 | 30044776 | ID=cds.MS.gene76381.t1;Parent=MS.gene76381.t1 |
chr8.1 | exon | 30044989 | 30045385 | 30044989 | ID=MS.gene76381.t1.exon2;Parent=MS.gene76381.t1 |
chr8.1 | CDS | 30044989 | 30045385 | 30044989 | ID=cds.MS.gene76381.t1;Parent=MS.gene76381.t1 |
chr8.1 | exon | 30045505 | 30045731 | 30045505 | ID=MS.gene76381.t1.exon3;Parent=MS.gene76381.t1 |
chr8.1 | CDS | 30045505 | 30045731 | 30045505 | ID=cds.MS.gene76381.t1;Parent=MS.gene76381.t1 |
chr8.1 | exon | 30046314 | 30047128 | 30046314 | ID=MS.gene76381.t1.exon4;Parent=MS.gene76381.t1 |
chr8.1 | CDS | 30046314 | 30047128 | 30046314 | ID=cds.MS.gene76381.t1;Parent=MS.gene76381.t1 |
Gene Sequence |
Protein sequence |