Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76382.t1 | XP_003629479.1 | 99.4 | 498 | 3 | 0 | 45 | 542 | 45 | 542 | 1.50E-264 | 921.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76382.t1 | O23210 | 53.6 | 470 | 180 | 13 | 88 | 541 | 38 | 485 | 4.5e-116 | 419.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76382.t1 | G7LEV2 | 99.4 | 498 | 3 | 0 | 45 | 542 | 45 | 542 | 1.1e-264 | 921.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene76382.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76382.t1 | MTR_8g077940 | 99.446 | 542 | 3 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1120 |
MS.gene76382.t1 | MTR_5g019750 | 66.807 | 238 | 77 | 2 | 306 | 542 | 59 | 295 | 5.27e-110 | 330 |
MS.gene76382.t1 | MTR_0092s0100 | 36.043 | 369 | 221 | 9 | 180 | 542 | 373 | 732 | 1.23e-58 | 207 |
MS.gene76382.t1 | MTR_0092s0100 | 36.043 | 369 | 221 | 9 | 180 | 542 | 370 | 729 | 1.46e-58 | 207 |
MS.gene76382.t1 | MTR_4g026485 | 33.243 | 370 | 229 | 10 | 180 | 542 | 267 | 625 | 1.10e-51 | 187 |
MS.gene76382.t1 | MTR_5g058860 | 29.156 | 391 | 242 | 14 | 179 | 542 | 116 | 498 | 6.56e-29 | 120 |
MS.gene76382.t1 | MTR_7g027190 | 26.131 | 398 | 250 | 13 | 174 | 542 | 292 | 674 | 8.57e-29 | 121 |
MS.gene76382.t1 | MTR_7g074650 | 27.371 | 369 | 239 | 13 | 185 | 541 | 441 | 792 | 1.74e-25 | 111 |
MS.gene76382.t1 | MTR_3g065980 | 26.943 | 386 | 245 | 13 | 179 | 541 | 169 | 540 | 5.93e-24 | 105 |
MS.gene76382.t1 | MTR_3g072710 | 28.042 | 378 | 227 | 13 | 197 | 542 | 137 | 501 | 1.07e-21 | 99.0 |
MS.gene76382.t1 | MTR_4g076020 | 26.685 | 371 | 230 | 13 | 185 | 541 | 87 | 429 | 6.32e-20 | 92.8 |
MS.gene76382.t1 | MTR_4g133660 | 23.232 | 396 | 265 | 12 | 176 | 542 | 159 | 544 | 1.68e-19 | 92.4 |
MS.gene76382.t1 | MTR_3g056110 | 24.552 | 391 | 255 | 14 | 175 | 541 | 168 | 542 | 8.76e-18 | 87.0 |
MS.gene76382.t1 | MTR_4g077760 | 26.575 | 365 | 229 | 14 | 199 | 541 | 208 | 555 | 2.49e-17 | 85.5 |
MS.gene76382.t1 | MTR_5g094450 | 24.874 | 398 | 249 | 16 | 175 | 541 | 154 | 532 | 1.00e-16 | 83.6 |
MS.gene76382.t1 | MTR_4g097080 | 22.872 | 376 | 267 | 12 | 183 | 541 | 134 | 503 | 4.07e-16 | 81.6 |
MS.gene76382.t1 | MTR_4g102790 | 27.922 | 308 | 192 | 12 | 251 | 540 | 366 | 661 | 6.36e-16 | 81.3 |
MS.gene76382.t1 | MTR_1g069725 | 25.168 | 298 | 201 | 11 | 255 | 542 | 179 | 464 | 1.07e-15 | 80.1 |
MS.gene76382.t1 | MTR_8g093070 | 26.963 | 382 | 235 | 16 | 180 | 540 | 137 | 495 | 1.36e-15 | 80.1 |
MS.gene76382.t1 | MTR_4g104020 | 24.918 | 305 | 199 | 11 | 255 | 542 | 230 | 521 | 6.02e-15 | 77.8 |
MS.gene76382.t1 | MTR_7g109580 | 23.011 | 352 | 236 | 9 | 211 | 541 | 217 | 554 | 1.16e-13 | 73.9 |
MS.gene76382.t1 | MTR_2g034280 | 26.857 | 350 | 227 | 13 | 181 | 510 | 202 | 542 | 1.33e-13 | 73.9 |
MS.gene76382.t1 | MTR_2g034250 | 24.103 | 390 | 264 | 13 | 176 | 541 | 204 | 585 | 3.34e-13 | 72.8 |
MS.gene76382.t1 | MTR_2g097410 | 22.835 | 381 | 259 | 12 | 183 | 540 | 372 | 740 | 6.53e-13 | 72.0 |
MS.gene76382.t1 | MTR_8g442410 | 22.469 | 405 | 265 | 15 | 167 | 541 | 140 | 525 | 1.06e-12 | 70.9 |
MS.gene76382.t1 | MTR_3g089055 | 22.105 | 380 | 215 | 14 | 207 | 541 | 227 | 570 | 3.51e-12 | 69.3 |
MS.gene76382.t1 | MTR_3g089055 | 22.105 | 380 | 215 | 14 | 207 | 541 | 222 | 565 | 3.70e-12 | 69.3 |
MS.gene76382.t1 | MTR_2g034260 | 22.472 | 356 | 237 | 10 | 181 | 510 | 209 | 551 | 5.51e-11 | 65.5 |
MS.gene76382.t1 | MTR_2g099110 | 21.368 | 351 | 242 | 13 | 118 | 446 | 1 | 339 | 6.95e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76382.t1 | AT4G36710 | 54.938 | 486 | 168 | 14 | 78 | 541 | 29 | 485 | 5.01e-166 | 480 |
MS.gene76382.t1 | AT4G00150 | 35.405 | 370 | 210 | 12 | 181 | 542 | 207 | 555 | 3.43e-57 | 200 |
MS.gene76382.t1 | AT2G45160 | 32.552 | 384 | 226 | 12 | 180 | 542 | 269 | 640 | 2.11e-49 | 181 |
MS.gene76382.t1 | AT3G60630 | 34.925 | 398 | 224 | 13 | 171 | 542 | 235 | 623 | 7.26e-46 | 171 |
MS.gene76382.t1 | AT3G54220 | 27.174 | 368 | 242 | 12 | 185 | 540 | 296 | 649 | 6.61e-26 | 112 |
MS.gene76382.t1 | AT2G01570 | 24.806 | 387 | 241 | 12 | 179 | 541 | 221 | 581 | 5.17e-20 | 94.0 |
MS.gene76382.t1 | AT1G66350 | 25.469 | 373 | 250 | 11 | 179 | 541 | 152 | 506 | 7.82e-20 | 93.2 |
MS.gene76382.t1 | AT5G41920 | 23.980 | 392 | 270 | 12 | 163 | 541 | 24 | 400 | 1.24e-19 | 91.7 |
MS.gene76382.t1 | AT4G08250 | 26.209 | 393 | 263 | 13 | 167 | 540 | 92 | 476 | 3.36e-19 | 90.9 |
MS.gene76382.t1 | AT5G59450 | 23.810 | 378 | 247 | 14 | 196 | 541 | 230 | 598 | 4.39e-19 | 91.3 |
MS.gene76382.t1 | AT1G14920 | 24.675 | 385 | 244 | 13 | 179 | 541 | 169 | 529 | 2.76e-18 | 88.6 |
MS.gene76382.t1 | AT4G17230 | 23.753 | 421 | 265 | 14 | 158 | 541 | 124 | 525 | 3.20e-18 | 88.2 |
MS.gene76382.t1 | AT4G17230 | 23.753 | 421 | 265 | 14 | 158 | 541 | 124 | 525 | 3.20e-18 | 88.2 |
MS.gene76382.t1 | AT1G21450 | 24.615 | 390 | 241 | 12 | 183 | 541 | 226 | 593 | 3.77e-18 | 88.2 |
MS.gene76382.t1 | AT3G03450 | 24.416 | 385 | 250 | 13 | 179 | 541 | 180 | 545 | 1.10e-17 | 86.7 |
MS.gene76382.t1 | AT5G66770 | 25.888 | 394 | 261 | 15 | 168 | 541 | 202 | 584 | 1.15e-17 | 86.7 |
MS.gene76382.t1 | AT3G46600 | 21.984 | 373 | 258 | 11 | 195 | 541 | 214 | 579 | 1.72e-17 | 86.3 |
MS.gene76382.t1 | AT5G17490 | 26.455 | 378 | 245 | 13 | 179 | 541 | 157 | 516 | 1.98e-17 | 85.9 |
MS.gene76382.t1 | AT5G48150 | 24.936 | 389 | 257 | 14 | 175 | 541 | 115 | 490 | 2.79e-17 | 85.1 |
MS.gene76382.t1 | AT5G48150 | 24.936 | 389 | 257 | 14 | 175 | 541 | 115 | 490 | 2.79e-17 | 85.1 |
MS.gene76382.t1 | AT5G48150 | 24.936 | 389 | 257 | 14 | 175 | 541 | 115 | 490 | 2.79e-17 | 85.1 |
MS.gene76382.t1 | AT5G48150 | 24.936 | 389 | 257 | 14 | 175 | 541 | 115 | 490 | 2.79e-17 | 85.1 |
MS.gene76382.t1 | AT3G46600 | 21.984 | 373 | 258 | 11 | 195 | 541 | 6 | 371 | 5.79e-17 | 83.2 |
MS.gene76382.t1 | AT3G46600 | 21.984 | 373 | 258 | 11 | 195 | 541 | 182 | 547 | 6.31e-17 | 84.3 |
MS.gene76382.t1 | AT1G50600 | 22.922 | 397 | 254 | 15 | 175 | 541 | 152 | 526 | 1.55e-16 | 83.2 |
MS.gene76382.t1 | AT3G50650 | 25.762 | 361 | 217 | 12 | 211 | 541 | 203 | 542 | 2.07e-16 | 82.8 |
MS.gene76382.t1 | AT1G50600 | 22.922 | 397 | 254 | 15 | 175 | 541 | 223 | 597 | 2.18e-16 | 82.8 |
MS.gene76382.t1 | AT1G50600 | 22.922 | 397 | 254 | 15 | 175 | 541 | 227 | 601 | 2.28e-16 | 82.8 |
MS.gene76382.t1 | AT1G63100 | 25.767 | 326 | 206 | 12 | 240 | 540 | 339 | 653 | 2.82e-16 | 82.4 |
MS.gene76382.t1 | AT1G63100 | 25.767 | 326 | 206 | 12 | 240 | 540 | 314 | 628 | 2.84e-16 | 82.4 |
MS.gene76382.t1 | AT2G04890 | 23.467 | 375 | 256 | 13 | 183 | 541 | 54 | 413 | 1.67e-14 | 76.3 |
MS.gene76382.t1 | AT4G37650 | 23.929 | 397 | 250 | 13 | 183 | 541 | 147 | 529 | 1.55e-13 | 73.6 |
MS.gene76382.t1 | AT1G07530 | 21.144 | 402 | 265 | 12 | 170 | 540 | 384 | 764 | 6.79e-12 | 68.9 |
Find 149 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTTCCTTGCCAAATT+TGG | 0.117679 | 8.1:+30070111 | MS.gene76382:CDS |
TGATCCTCTTGTTCCACTTC+TGG | 0.188414 | 8.1:-30070091 | None:intergenic |
GTAAATTTCTGAGGTGTTAT+TGG | 0.230885 | 8.1:-30070212 | None:intergenic |
GATTCCATCATGAAAGATTT+AGG | 0.266291 | 8.1:+30070142 | MS.gene76382:CDS |
AACACAACGTGGTGGTTGTT+GGG | 0.276916 | 8.1:-30069988 | None:intergenic |
GAATCCCACCAATCCAAATT+TGG | 0.283710 | 8.1:-30070124 | None:intergenic |
GTTGGGGTTGGTGTCGGGTT+GGG | 0.288068 | 8.1:-30069971 | None:intergenic |
CTGCAGCGGCGGCGTCGTTT+CGG | 0.293812 | 8.1:+30071133 | MS.gene76382:CDS |
GGTAATTATAAGCCAGGTTT+TGG | 0.301671 | 8.1:-30070306 | None:intergenic |
TCGAGATTAGTGTTTGTGTT+AGG | 0.309900 | 8.1:-30070328 | None:intergenic |
AAAGGCCTTGAAGGTTCTTA+TGG | 0.314691 | 8.1:-30070632 | None:intergenic |
GATTATGTTCTTGTTCTTGT+TGG | 0.326308 | 8.1:-30070069 | None:intergenic |
TGGTTGTTGGGGTTGGTGTC+GGG | 0.344462 | 8.1:-30069976 | None:intergenic |
GGCTCGGTGTAGCGGTTTAC+CGG | 0.345316 | 8.1:-30070515 | None:intergenic |
GCCTCGGTGGCGGCTGGAGG+AGG | 0.352076 | 8.1:+30071210 | MS.gene76382:CDS |
GTGGTTGTTGGGGTTGGTGT+CGG | 0.360358 | 8.1:-30069977 | None:intergenic |
TGACCTTGGAATTCGTGTTC+AGG | 0.367914 | 8.1:+30070909 | MS.gene76382:CDS |
CGAGATTAGTGTTTGTGTTA+GGG | 0.367919 | 8.1:-30070327 | None:intergenic |
AATTGGTCTTGAGAAGGGTT+AGG | 0.371799 | 8.1:-30070235 | None:intergenic |
TTGCTATTGGTGTTGTTGTT+TGG | 0.377424 | 8.1:-30070382 | None:intergenic |
TGTTGGGGTTGGTGTCGGGT+TGG | 0.378037 | 8.1:-30069972 | None:intergenic |
AGTCTTGAGTTTGATCAAAT+TGG | 0.380503 | 8.1:-30070252 | None:intergenic |
CCACGGCGTCGTTCTTCTTC+CGG | 0.380608 | 8.1:-30071301 | None:intergenic |
TAACACAACGTGGTGGTTGT+TGG | 0.387408 | 8.1:-30069989 | None:intergenic |
CGGTACGGCAGCGTTTCTTT+CGG | 0.387789 | 8.1:+30071050 | MS.gene76382:CDS |
CCTTGCCAAATTTGGATTGG+TGG | 0.391157 | 8.1:+30070119 | MS.gene76382:CDS |
GATGAAATCCCAGTTGCTAT+TGG | 0.391917 | 8.1:-30070395 | None:intergenic |
ATTATGTTCTTGTTCTTGTT+GGG | 0.392708 | 8.1:-30070068 | None:intergenic |
TTGGATGCCTCGGTGGCGGC+TGG | 0.395348 | 8.1:+30071204 | MS.gene76382:CDS |
GTTGGTGTCGGGTTGGGAGT+TGG | 0.396424 | 8.1:-30069965 | None:intergenic |
AAAATAGAAAACATTGGAAT+AGG | 0.396620 | 8.1:-30070667 | None:intergenic |
TCGGTGGCGGCTGGAGGAGG+AGG | 0.399598 | 8.1:+30071213 | MS.gene76382:CDS |
ACAACAACACCAATAGCAAC+TGG | 0.404968 | 8.1:+30070386 | MS.gene76382:CDS |
CAACTGCACCGGCCTCATTC+CGG | 0.408407 | 8.1:-30071343 | None:intergenic |
GAGGAGGAGGAGAGTGGGCG+AGG | 0.418653 | 8.1:+30071226 | MS.gene76382:CDS |
TATTGGTGTTGTTGTTTGGT+TGG | 0.426195 | 8.1:-30070378 | None:intergenic |
TCAAACCATAAGAACCTTCA+AGG | 0.431138 | 8.1:+30070627 | MS.gene76382:CDS |
TCGTATTACCGCCGTCGTGC+CGG | 0.439174 | 8.1:+30070831 | MS.gene76382:CDS |
CTTCCTTGCCAAATTTGGAT+TGG | 0.439496 | 8.1:+30070116 | MS.gene76382:CDS |
CTTGCCAAATTTGGATTGGT+GGG | 0.444203 | 8.1:+30070120 | MS.gene76382:CDS |
TGTTCTTGTTCTTGTTGGGT+TGG | 0.446982 | 8.1:-30070064 | None:intergenic |
CTCTTCTCTCCGGTTCAAAC+CGG | 0.449911 | 8.1:+30070566 | MS.gene76382:CDS |
AATTCCAGAAAAGGCCTTGA+AGG | 0.451575 | 8.1:-30070641 | None:intergenic |
TCCACCGCCGCAATTATCTT+CGG | 0.453533 | 8.1:-30071273 | None:intergenic |
TGGATTAGTCCGGTTTGAAC+CGG | 0.458396 | 8.1:-30070575 | None:intergenic |
TCAATACGCTTCTCTTATGA+AGG | 0.459636 | 8.1:+30070771 | MS.gene76382:CDS |
ATTGGTCTTGAGAAGGGTTA+GGG | 0.464916 | 8.1:-30070234 | None:intergenic |
GCGTGGTGTTGTGAATAGTT+TGG | 0.467495 | 8.1:+30071155 | MS.gene76382:CDS |
GATGCCTCGGTGGCGGCTGG+AGG | 0.468543 | 8.1:+30071207 | MS.gene76382:CDS |
CTCGATGATGCTGGAGTCGT+TGG | 0.476544 | 8.1:+30071185 | MS.gene76382:CDS |
TAAACCTAAATCTTTCATGA+TGG | 0.477308 | 8.1:-30070146 | None:intergenic |
GGCTGGAGGAGGAGGAGAGT+GGG | 0.477436 | 8.1:+30071221 | MS.gene76382:CDS |
CTTTCAACGGCGTACTCCTC+CGG | 0.478029 | 8.1:-30070850 | None:intergenic |
GAGGAGGAGAGTGGGCGAGG+AGG | 0.479169 | 8.1:+30071229 | MS.gene76382:CDS |
CGGTGTCGTTTAAAGCGGTT+AGG | 0.480818 | 8.1:+30070962 | MS.gene76382:CDS |
AACGTGGTGGTTGTTGGGGT+TGG | 0.481466 | 8.1:-30069983 | None:intergenic |
AATCAGTTCGCGCATGACCT+TGG | 0.482074 | 8.1:+30070895 | MS.gene76382:CDS |
GCCGAAGATAATTGCGGCGG+TGG | 0.489687 | 8.1:+30071272 | MS.gene76382:CDS |
TGTTAGGGTAATTATAAGCC+AGG | 0.491030 | 8.1:-30070312 | None:intergenic |
CGGCTGGAGGAGGAGGAGAG+TGG | 0.495985 | 8.1:+30071220 | MS.gene76382:CDS |
GCTGGAGTCGTTGGATGCCT+CGG | 0.501381 | 8.1:+30071194 | MS.gene76382:CDS |
AATAGGTGAAATTCCAGAAA+AGG | 0.509209 | 8.1:-30070650 | None:intergenic |
AGGAGTACGCCGTTGAAAGC+AGG | 0.512249 | 8.1:+30070854 | MS.gene76382:CDS |
TCCACCGCGTCTTTCTTCCA+TGG | 0.516075 | 8.1:+30070594 | MS.gene76382:CDS |
ATGGACGGAGGCTGCAGCGG+CGG | 0.516508 | 8.1:+30071122 | MS.gene76382:CDS |
TTACGGCGCCGGAATGAGGC+CGG | 0.517709 | 8.1:+30071335 | MS.gene76382:CDS |
AGCGGAGTGTTTGCTTGCGA+AGG | 0.519373 | 8.1:+30071386 | MS.gene76382:CDS |
GTCGTTGGATGCCTCGGTGG+CGG | 0.520864 | 8.1:+30071200 | MS.gene76382:CDS |
TGATCAAATTGGTCTTGAGA+AGG | 0.522948 | 8.1:-30070241 | None:intergenic |
GATGAGGAAACCGCAGGAGG+AGG | 0.527076 | 8.1:-30069887 | None:intergenic |
GCTCTTCAATCTCTTCTCTC+CGG | 0.529069 | 8.1:+30070556 | MS.gene76382:CDS |
CCATGGTTGCCACGTCAGCT+TGG | 0.529649 | 8.1:+30071475 | MS.gene76382:CDS |
TGGTTGCCACGTCAGCTTGG+CGG | 0.535528 | 8.1:+30071478 | MS.gene76382:CDS |
CTTGCGAAGGTGCAAATCAG+AGG | 0.537232 | 8.1:+30071399 | MS.gene76382:CDS |
ATTGCGGCGGTGGAAGCTGC+CGG | 0.538123 | 8.1:+30071282 | MS.gene76382:CDS |
AAAGACGCGGTGGATTAGTC+CGG | 0.539736 | 8.1:-30070585 | None:intergenic |
CCGGCGATATTCTGTCGACT+TGG | 0.540496 | 8.1:+30071021 | MS.gene76382:CDS |
GCAAAGCTTCGAGTAAAGCT+TGG | 0.544163 | 8.1:-30070699 | None:intergenic |
CCGCCGCAATTATCTTCGGC+CGG | 0.547383 | 8.1:-30071269 | None:intergenic |
CAGCGTTTCTTTCGGATGTG+AGG | 0.549183 | 8.1:+30071058 | MS.gene76382:CDS |
CCAAGCTGACGTGGCAACCA+TGG | 0.549429 | 8.1:-30071475 | None:intergenic |
CGGTGTAGCGGTTTACCGGT+GGG | 0.550196 | 8.1:-30070511 | None:intergenic |
CAGCTTGTCGTTTCGCCACG+TGG | 0.561710 | 8.1:-30071425 | None:intergenic |
GATCAAATTGGTCTTGAGAA+GGG | 0.563154 | 8.1:-30070240 | None:intergenic |
TCGGTGTAGCGGTTTACCGG+TGG | 0.563311 | 8.1:-30070512 | None:intergenic |
TCCTCCTCCAGCCGCCACCG+AGG | 0.564779 | 8.1:-30071211 | None:intergenic |
AGGGTTAGGGTAAATTTCTG+AGG | 0.565391 | 8.1:-30070221 | None:intergenic |
CCGTAAAACGCCTCTCTCCA+CGG | 0.571296 | 8.1:-30071318 | None:intergenic |
CGTTTCTTTCGGATGTGAGG+AGG | 0.571807 | 8.1:+30071061 | MS.gene76382:CDS |
TTCTGTCGACTTGGTTCCGA+CGG | 0.575503 | 8.1:+30071030 | MS.gene76382:CDS |
GGCGAAACGACAAGCTGAGT+TGG | 0.575766 | 8.1:+30071431 | MS.gene76382:CDS |
TTTCTGGCATGAGAGGGCCA+TGG | 0.576311 | 8.1:+30071458 | MS.gene76382:CDS |
GTGGTGGTGAGCTTTGGTTG+TGG | 0.577306 | 8.1:-30069920 | None:intergenic |
ACAAGAACATAATCCAGAAG+TGG | 0.578039 | 8.1:+30070078 | MS.gene76382:CDS |
TGTCGACGGTGAGGGATGGA+CGG | 0.579356 | 8.1:+30071107 | MS.gene76382:CDS |
TTACTCTAATAACCAAAACC+TGG | 0.580137 | 8.1:+30070294 | MS.gene76382:CDS |
GGGATGGACGGAGGCTGCAG+CGG | 0.580690 | 8.1:+30071119 | MS.gene76382:CDS |
GCTTTACTCGAAGCTTTGCA+TGG | 0.581206 | 8.1:+30070703 | MS.gene76382:CDS |
CTAACACCGCCAAGCTGACG+TGG | 0.585685 | 8.1:-30071484 | None:intergenic |
ACGAATCAACCTGCTTTCAA+CGG | 0.586384 | 8.1:-30070863 | None:intergenic |
TGAAACGCGGCTCGGTGTAG+CGG | 0.587607 | 8.1:-30070523 | None:intergenic |
TATTAGAGAGGCTGAATCAA+CGG | 0.590000 | 8.1:+30070479 | MS.gene76382:CDS |
AAGAACGACGCCGTGGAGAG+AGG | 0.590148 | 8.1:+30071308 | MS.gene76382:CDS |
TCGACTTGGTTCCGACGGTA+CGG | 0.590389 | 8.1:+30071035 | MS.gene76382:CDS |
GGTGCAGTTGAGTCAGTTCG+CGG | 0.593334 | 8.1:+30071356 | MS.gene76382:CDS |
GTTCGTCGACGGTGAGAAGA+CGG | 0.596757 | 8.1:+30070984 | MS.gene76382:CDS |
TAATCCAGAAGTGGAACAAG+AGG | 0.598420 | 8.1:+30070087 | MS.gene76382:CDS |
GTACTCCTCCGGCACGACGG+CGG | 0.598659 | 8.1:-30070839 | None:intergenic |
GAGGATAACTCCAGGTGTGG+TGG | 0.598886 | 8.1:+30071080 | MS.gene76382:CDS |
TATTACCGCCGTCGTGCCGG+AGG | 0.600122 | 8.1:+30070834 | MS.gene76382:CDS |
ACACAACGTGGTGGTTGTTG+GGG | 0.605374 | 8.1:-30069987 | None:intergenic |
GTTGTGTTACGAACCACGAT+CGG | 0.606028 | 8.1:+30070003 | MS.gene76382:CDS |
CTTTGAAATGAAACGCGGCT+CGG | 0.609325 | 8.1:-30070531 | None:intergenic |
CCAAGTCGACAGAATATCGC+CGG | 0.609400 | 8.1:-30071021 | None:intergenic |
GGCGTACTCCTCCGGCACGA+CGG | 0.610618 | 8.1:-30070842 | None:intergenic |
AATGAGAGTTCCTCCTCCTG+CGG | 0.612142 | 8.1:+30069877 | None:intergenic |
CCACCAATCCAAATTTGGCA+AGG | 0.617858 | 8.1:-30070119 | None:intergenic |
GCTCCGGCCGAAGATAATTG+CGG | 0.620112 | 8.1:+30071266 | MS.gene76382:CDS |
ACCGCGTCTTTCTTCCATGG+TGG | 0.623116 | 8.1:+30070597 | MS.gene76382:CDS |
GTTGTGAAAATAGAAAACAT+TGG | 0.623944 | 8.1:-30070673 | None:intergenic |
CAACGGCTACGATCACCCAC+CGG | 0.625603 | 8.1:+30070496 | MS.gene76382:CDS |
GCGGCGGCGTCGTTTCGGCG+TGG | 0.626352 | 8.1:+30071138 | MS.gene76382:CDS |
CAAAGCTCGAGAACCGATCG+TGG | 0.627563 | 8.1:-30070016 | None:intergenic |
TGAAACGGTGTCGTTTAAAG+CGG | 0.629353 | 8.1:+30070957 | MS.gene76382:CDS |
CAACAACACCAATAGCAACT+GGG | 0.629954 | 8.1:+30070387 | MS.gene76382:CDS |
CAACCTGAACACGAATTCCA+AGG | 0.634144 | 8.1:-30070912 | None:intergenic |
AAAGCGGTTAGGTTCGTCGA+CGG | 0.634924 | 8.1:+30070973 | MS.gene76382:CDS |
GATGTGAGGAGGATAACTCC+AGG | 0.638844 | 8.1:+30071072 | MS.gene76382:CDS |
AAGAAACGCTGCCGTACCGT+CGG | 0.639149 | 8.1:-30071046 | None:intergenic |
GCGAACTGACTCAACTGCAC+CGG | 0.640884 | 8.1:-30071354 | None:intergenic |
TCGCTCAAGCAATATTAGAG+AGG | 0.653959 | 8.1:+30070467 | MS.gene76382:CDS |
CGACGGTGAGGGATGGACGG+AGG | 0.657902 | 8.1:+30071110 | MS.gene76382:CDS |
GGTTTGAACAATCTCCACCA+TGG | 0.658087 | 8.1:-30070611 | None:intergenic |
CCGGAAGAAGAACGACGCCG+TGG | 0.659160 | 8.1:+30071301 | MS.gene76382:CDS |
GATGATGATGAGGAAACCGC+AGG | 0.662901 | 8.1:-30069893 | None:intergenic |
ACCGTTTCAAAAGTCCTCAA+CGG | 0.663313 | 8.1:-30070943 | None:intergenic |
TTGTGGTGATGATGATGATG+AGG | 0.674428 | 8.1:-30069903 | None:intergenic |
CCGGCCGAAGATAATTGCGG+CGG | 0.681801 | 8.1:+30071269 | MS.gene76382:CDS |
ACGGCGGTAATACGAAGCAA+CGG | 0.687644 | 8.1:-30070823 | None:intergenic |
GACGGCGATTCTGTTAACGC+CGG | 0.694562 | 8.1:+30071002 | MS.gene76382:CDS |
GGAGTCGTTGGATGCCTCGG+TGG | 0.703457 | 8.1:+30071197 | MS.gene76382:CDS |
ACCATGGAAGAAAGACGCGG+TGG | 0.710930 | 8.1:-30070595 | None:intergenic |
GATGATGAGGAAACCGCAGG+AGG | 0.712498 | 8.1:-30069890 | None:intergenic |
TCGTGGTTCGTAACACAACG+TGG | 0.724066 | 8.1:-30069999 | None:intergenic |
AGCGTCTTTGAAATGAAACG+CGG | 0.732740 | 8.1:-30070536 | None:intergenic |
GAGGAGGATAACTCCAGGTG+TGG | 0.733862 | 8.1:+30071077 | MS.gene76382:CDS |
TGGTTCGTAACACAACGTGG+TGG | 0.752461 | 8.1:-30069996 | None:intergenic |
TCCACCATGGAAGAAAGACG+CGG | 0.760474 | 8.1:-30070598 | None:intergenic |
GCAAATCAGAGGCTTCCACG+TGG | 0.765130 | 8.1:+30071410 | MS.gene76382:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAGAAAACATTGGAAT+AGG | - | chr8.1:30070670-30070689 | None:intergenic | 20.0% |
! | ATTATGTTCTTGTTCTTGTT+GGG | - | chr8.1:30070071-30070090 | None:intergenic | 25.0% |
! | ATTGCTGAAAAAGCTATTAA+CGG | + | chr8.1:30070796-30070815 | MS.gene76382:CDS | 25.0% |
! | GTTGTGAAAATAGAAAACAT+TGG | - | chr8.1:30070676-30070695 | None:intergenic | 25.0% |
! | TAAACCTAAATCTTTCATGA+TGG | - | chr8.1:30070149-30070168 | None:intergenic | 25.0% |
AATAGGTGAAATTCCAGAAA+AGG | - | chr8.1:30070653-30070672 | None:intergenic | 30.0% | |
AGTCTTGAGTTTGATCAAAT+TGG | - | chr8.1:30070255-30070274 | None:intergenic | 30.0% | |
GATTATGTTCTTGTTCTTGT+TGG | - | chr8.1:30070072-30070091 | None:intergenic | 30.0% | |
GATTCCATCATGAAAGATTT+AGG | + | chr8.1:30070142-30070161 | MS.gene76382:CDS | 30.0% | |
TTACTCTAATAACCAAAACC+TGG | + | chr8.1:30070294-30070313 | MS.gene76382:CDS | 30.0% | |
!! | GTAAATTTCTGAGGTGTTAT+TGG | - | chr8.1:30070215-30070234 | None:intergenic | 30.0% |
!!! | CACGTTGTTGATTTTGAAAT+TGG | + | chr8.1:30070739-30070758 | MS.gene76382:CDS | 30.0% |
!!! | GTTATTGGTGTTTTTCAAGA+GGG | - | chr8.1:30070200-30070219 | None:intergenic | 30.0% |
!!! | GTTGATTTTGAAATTGGTCT+TGG | + | chr8.1:30070745-30070764 | MS.gene76382:CDS | 30.0% |
!!! | TGTTATTGGTGTTTTTCAAG+AGG | - | chr8.1:30070201-30070220 | None:intergenic | 30.0% |
!!! | TTATTGGTGTTTTTCAAGAG+GGG | - | chr8.1:30070199-30070218 | None:intergenic | 30.0% |
!!! | TTTTTCAAGAGGGGTATTAT+GGG | - | chr8.1:30070190-30070209 | None:intergenic | 30.0% |
ACAAGAACATAATCCAGAAG+TGG | + | chr8.1:30070078-30070097 | MS.gene76382:CDS | 35.0% | |
CGAGATTAGTGTTTGTGTTA+GGG | - | chr8.1:30070330-30070349 | None:intergenic | 35.0% | |
TATTAGAGAGGCTGAATCAA+CGG | + | chr8.1:30070479-30070498 | MS.gene76382:CDS | 35.0% | |
TCAAACCATAAGAACCTTCA+AGG | + | chr8.1:30070627-30070646 | MS.gene76382:CDS | 35.0% | |
TCAATACGCTTCTCTTATGA+AGG | + | chr8.1:30070771-30070790 | MS.gene76382:CDS | 35.0% | |
TCGAGATTAGTGTTTGTGTT+AGG | - | chr8.1:30070331-30070350 | None:intergenic | 35.0% | |
TGTTAGGGTAATTATAAGCC+AGG | - | chr8.1:30070315-30070334 | None:intergenic | 35.0% | |
! | GGTAATTATAAGCCAGGTTT+TGG | - | chr8.1:30070309-30070328 | None:intergenic | 35.0% |
!! | GATCAAATTGGTCTTGAGAA+GGG | - | chr8.1:30070243-30070262 | None:intergenic | 35.0% |
!! | TATTGGTGTTGTTGTTTGGT+TGG | - | chr8.1:30070381-30070400 | None:intergenic | 35.0% |
!! | TGATCAAATTGGTCTTGAGA+AGG | - | chr8.1:30070244-30070263 | None:intergenic | 35.0% |
!! | TTGCTATTGGTGTTGTTGTT+TGG | - | chr8.1:30070385-30070404 | None:intergenic | 35.0% |
!!! | GTTTTTCAAGAGGGGTATTA+TGG | - | chr8.1:30070191-30070210 | None:intergenic | 35.0% |
AAAGGCCTTGAAGGTTCTTA+TGG | - | chr8.1:30070635-30070654 | None:intergenic | 40.0% | |
AATTCCAGAAAAGGCCTTGA+AGG | - | chr8.1:30070644-30070663 | None:intergenic | 40.0% | |
ACAACAACACCAATAGCAAC+TGG | + | chr8.1:30070386-30070405 | MS.gene76382:CDS | 40.0% | |
ACCGTTTCAAAAGTCCTCAA+CGG | - | chr8.1:30070946-30070965 | None:intergenic | 40.0% | |
ACGAATCAACCTGCTTTCAA+CGG | - | chr8.1:30070866-30070885 | None:intergenic | 40.0% | |
AGGGTTAGGGTAAATTTCTG+AGG | - | chr8.1:30070224-30070243 | None:intergenic | 40.0% | |
CAACAACACCAATAGCAACT+GGG | + | chr8.1:30070387-30070406 | MS.gene76382:CDS | 40.0% | |
CTTCCTTGCCAAATTTGGAT+TGG | + | chr8.1:30070116-30070135 | MS.gene76382:CDS | 40.0% | |
GAATCCCACCAATCCAAATT+TGG | - | chr8.1:30070127-30070146 | None:intergenic | 40.0% | |
GATGAAATCCCAGTTGCTAT+TGG | - | chr8.1:30070398-30070417 | None:intergenic | 40.0% | |
TAATCCAGAAGTGGAACAAG+AGG | + | chr8.1:30070087-30070106 | MS.gene76382:CDS | 40.0% | |
TCATGCTTCCTTGCCAAATT+TGG | + | chr8.1:30070111-30070130 | MS.gene76382:CDS | 40.0% | |
TCGCTCAAGCAATATTAGAG+AGG | + | chr8.1:30070467-30070486 | MS.gene76382:CDS | 40.0% | |
TGTTCTTGTTCTTGTTGGGT+TGG | - | chr8.1:30070067-30070086 | None:intergenic | 40.0% | |
! | TTGGTTTCTTTTCTGGGCTA+GGG | - | chr8.1:30070048-30070067 | None:intergenic | 40.0% |
! | TTGTGGTGATGATGATGATG+AGG | - | chr8.1:30069906-30069925 | None:intergenic | 40.0% |
!! | AATTGGTCTTGAGAAGGGTT+AGG | - | chr8.1:30070238-30070257 | None:intergenic | 40.0% |
!! | AGCGTCTTTGAAATGAAACG+CGG | - | chr8.1:30070539-30070558 | None:intergenic | 40.0% |
!! | ATTGGTCTTGAGAAGGGTTA+GGG | - | chr8.1:30070237-30070256 | None:intergenic | 40.0% |
!! | CTTGCCAAATTTGGATTGGT+GGG | + | chr8.1:30070120-30070139 | MS.gene76382:CDS | 40.0% |
!! | GTTAACGACGATGTTTTGAG+TGG | - | chr8.1:30069942-30069961 | None:intergenic | 40.0% |
!! | TGAAACGGTGTCGTTTAAAG+CGG | + | chr8.1:30070957-30070976 | MS.gene76382:CDS | 40.0% |
!!! | GTTGGGTTGGTTTCTTTTCT+GGG | - | chr8.1:30070054-30070073 | None:intergenic | 40.0% |
!!! | TGTTGGGTTGGTTTCTTTTC+TGG | - | chr8.1:30070055-30070074 | None:intergenic | 40.0% |
AACACAACGTGGTGGTTGTT+GGG | - | chr8.1:30069991-30070010 | None:intergenic | 45.0% | |
CAACCTGAACACGAATTCCA+AGG | - | chr8.1:30070915-30070934 | None:intergenic | 45.0% | |
CCACCAATCCAAATTTGGCA+AGG | - | chr8.1:30070122-30070141 | None:intergenic | 45.0% | |
GCAAAGCTTCGAGTAAAGCT+TGG | - | chr8.1:30070702-30070721 | None:intergenic | 45.0% | |
GCTCTTCAATCTCTTCTCTC+CGG | + | chr8.1:30070556-30070575 | MS.gene76382:CDS | 45.0% | |
GCTTTACTCGAAGCTTTGCA+TGG | + | chr8.1:30070703-30070722 | MS.gene76382:CDS | 45.0% | |
GGTTTGAACAATCTCCACCA+TGG | - | chr8.1:30070614-30070633 | None:intergenic | 45.0% | |
GTTGTGTTACGAACCACGAT+CGG | + | chr8.1:30070003-30070022 | MS.gene76382:CDS | 45.0% | |
TAACACAACGTGGTGGTTGT+TGG | - | chr8.1:30069992-30070011 | None:intergenic | 45.0% | |
TGACCTTGGAATTCGTGTTC+AGG | + | chr8.1:30070909-30070928 | MS.gene76382:CDS | 45.0% | |
TGATCCTCTTGTTCCACTTC+TGG | - | chr8.1:30070094-30070113 | None:intergenic | 45.0% | |
! | AGAACCTTCAAGGCCTTTTC+TGG | + | chr8.1:30070637-30070656 | MS.gene76382:CDS | 45.0% |
! | CCTTGCCAAATTTGGATTGG+TGG | + | chr8.1:30070119-30070138 | MS.gene76382:CDS | 45.0% |
! | GGAGTTTTACTCGATGATGC+TGG | + | chr8.1:30071176-30071195 | MS.gene76382:CDS | 45.0% |
! | GGATTGAGATGCTTTTGCTC+CGG | + | chr8.1:30071250-30071269 | MS.gene76382:CDS | 45.0% |
!! | AACGACGATGTTTTGAGTGG+TGG | - | chr8.1:30069939-30069958 | None:intergenic | 45.0% |
!! | AGGTTGATTTTGTGCCGTTG+AGG | + | chr8.1:30070929-30070948 | MS.gene76382:CDS | 45.0% |
!! | CTTTGAAATGAAACGCGGCT+CGG | - | chr8.1:30070534-30070553 | None:intergenic | 45.0% |
!! | GCCGTTGAGGACTTTTGAAA+CGG | + | chr8.1:30070942-30070961 | MS.gene76382:CDS | 45.0% |
!! | GCGTGGTGTTGTGAATAGTT+TGG | + | chr8.1:30071155-30071174 | MS.gene76382:CDS | 45.0% |
!! | GTTGGTTTCTTTTCTGGGCT+AGG | - | chr8.1:30070049-30070068 | None:intergenic | 45.0% |
!! | TCAGTTCGCGGATTTTCAAG+CGG | + | chr8.1:30071368-30071387 | MS.gene76382:CDS | 45.0% |
!! | TGGATTAGTCCGGTTTGAAC+CGG | - | chr8.1:30070578-30070597 | None:intergenic | 45.0% |
!! | TTTTGAGTGGTGGTGAGCTT+TGG | - | chr8.1:30069929-30069948 | None:intergenic | 45.0% |
!!! | AAGCTGAGTTGGTGCTTTTC+TGG | + | chr8.1:30071442-30071461 | MS.gene76382:CDS | 45.0% |
AAAGCGGTTAGGTTCGTCGA+CGG | + | chr8.1:30070973-30070992 | MS.gene76382:CDS | 50.0% | |
AATCAGTTCGCGCATGACCT+TGG | + | chr8.1:30070895-30070914 | MS.gene76382:CDS | 50.0% | |
ACACAACGTGGTGGTTGTTG+GGG | - | chr8.1:30069990-30070009 | None:intergenic | 50.0% | |
ACGGCGGTAATACGAAGCAA+CGG | - | chr8.1:30070826-30070845 | None:intergenic | 50.0% | |
CAGCGTTTCTTTCGGATGTG+AGG | + | chr8.1:30071058-30071077 | MS.gene76382:CDS | 50.0% | |
CCAAGTCGACAGAATATCGC+CGG | - | chr8.1:30071024-30071043 | None:intergenic | 50.0% | |
CGTTTCTTTCGGATGTGAGG+AGG | + | chr8.1:30071061-30071080 | MS.gene76382:CDS | 50.0% | |
CTCTTCTCTCCGGTTCAAAC+CGG | + | chr8.1:30070566-30070585 | MS.gene76382:CDS | 50.0% | |
GATGTGAGGAGGATAACTCC+AGG | + | chr8.1:30071072-30071091 | MS.gene76382:CDS | 50.0% | |
TCCACCATGGAAGAAAGACG+CGG | - | chr8.1:30070601-30070620 | None:intergenic | 50.0% | |
TCCACCGCCGCAATTATCTT+CGG | - | chr8.1:30071276-30071295 | None:intergenic | 50.0% | |
TCGACAAAAACCACCACACC+TGG | - | chr8.1:30071093-30071112 | None:intergenic | 50.0% | |
TCGTGGTTCGTAACACAACG+TGG | - | chr8.1:30070002-30070021 | None:intergenic | 50.0% | |
TGGTTCGTAACACAACGTGG+TGG | - | chr8.1:30069999-30070018 | None:intergenic | 50.0% | |
! | CTTGCGAAGGTGCAAATCAG+AGG | + | chr8.1:30071399-30071418 | MS.gene76382:CDS | 50.0% |
! | GATGATGATGAGGAAACCGC+AGG | - | chr8.1:30069896-30069915 | None:intergenic | 50.0% |
! | GGTGTGGTGGTTTTTGTCGA+CGG | + | chr8.1:30071093-30071112 | MS.gene76382:CDS | 50.0% |
! | GTGGTTTTTGTCGACGGTGA+GGG | + | chr8.1:30071099-30071118 | MS.gene76382:CDS | 50.0% |
! | TTTTTGTCGACGGTGAGGGA+TGG | + | chr8.1:30071103-30071122 | MS.gene76382:CDS | 50.0% |
!! | AAAGACGCGGTGGATTAGTC+CGG | - | chr8.1:30070588-30070607 | None:intergenic | 50.0% |
!! | CGGTGTCGTTTAAAGCGGTT+AGG | + | chr8.1:30070962-30070981 | MS.gene76382:CDS | 50.0% |
!! | GGTGCTTTTCTGGCATGAGA+GGG | + | chr8.1:30071452-30071471 | MS.gene76382:CDS | 50.0% |
!! | TGGTGCTTTTCTGGCATGAG+AGG | + | chr8.1:30071451-30071470 | MS.gene76382:CDS | 50.0% |
!! | TTCTGTCGACTTGGTTCCGA+CGG | + | chr8.1:30071030-30071049 | MS.gene76382:CDS | 50.0% |
AACGTGGTGGTTGTTGGGGT+TGG | - | chr8.1:30069986-30070005 | None:intergenic | 55.0% | |
AAGAAACGCTGCCGTACCGT+CGG | - | chr8.1:30071049-30071068 | None:intergenic | 55.0% | |
ACCATGGAAGAAAGACGCGG+TGG | - | chr8.1:30070598-30070617 | None:intergenic | 55.0% | |
ACCGCGTCTTTCTTCCATGG+TGG | + | chr8.1:30070597-30070616 | MS.gene76382:CDS | 55.0% | |
CAAAGCTCGAGAACCGATCG+TGG | - | chr8.1:30070019-30070038 | None:intergenic | 55.0% | |
CCGTAAAACGCCTCTCTCCA+CGG | - | chr8.1:30071321-30071340 | None:intergenic | 55.0% | |
CGGTACGGCAGCGTTTCTTT+CGG | + | chr8.1:30071050-30071069 | MS.gene76382:CDS | 55.0% | |
CTCGATGATGCTGGAGTCGT+TGG | + | chr8.1:30071185-30071204 | MS.gene76382:CDS | 55.0% | |
CTTTCAACGGCGTACTCCTC+CGG | - | chr8.1:30070853-30070872 | None:intergenic | 55.0% | |
GACGGCGATTCTGTTAACGC+CGG | + | chr8.1:30071002-30071021 | MS.gene76382:CDS | 55.0% | |
GAGGAGGATAACTCCAGGTG+TGG | + | chr8.1:30071077-30071096 | MS.gene76382:CDS | 55.0% | |
GAGGATAACTCCAGGTGTGG+TGG | + | chr8.1:30071080-30071099 | MS.gene76382:CDS | 55.0% | |
GATGATGAGGAAACCGCAGG+AGG | - | chr8.1:30069893-30069912 | None:intergenic | 55.0% | |
GCAAATCAGAGGCTTCCACG+TGG | + | chr8.1:30071410-30071429 | MS.gene76382:CDS | 55.0% | |
GCTCCGGCCGAAGATAATTG+CGG | + | chr8.1:30071266-30071285 | MS.gene76382:CDS | 55.0% | |
GGCGAAACGACAAGCTGAGT+TGG | + | chr8.1:30071431-30071450 | MS.gene76382:CDS | 55.0% | |
GGTGCAGTTGAGTCAGTTCG+CGG | + | chr8.1:30071356-30071375 | MS.gene76382:CDS | 55.0% | |
GTTCGTCGACGGTGAGAAGA+CGG | + | chr8.1:30070984-30071003 | MS.gene76382:CDS | 55.0% | |
TCCACCGCGTCTTTCTTCCA+TGG | + | chr8.1:30070594-30070613 | MS.gene76382:CDS | 55.0% | |
! | AGCGGAGTGTTTGCTTGCGA+AGG | + | chr8.1:30071386-30071405 | MS.gene76382:CDS | 55.0% |
! | AGGAGTACGCCGTTGAAAGC+AGG | + | chr8.1:30070854-30070873 | MS.gene76382:CDS | 55.0% |
! | CCGGCGATATTCTGTCGACT+TGG | + | chr8.1:30071021-30071040 | MS.gene76382:CDS | 55.0% |
! | GCGAACTGACTCAACTGCAC+CGG | - | chr8.1:30071357-30071376 | None:intergenic | 55.0% |
! | GGTGGTTTTTGTCGACGGTG+AGG | + | chr8.1:30071098-30071117 | MS.gene76382:CDS | 55.0% |
! | GTGGTGGTGAGCTTTGGTTG+TGG | - | chr8.1:30069923-30069942 | None:intergenic | 55.0% |
! | TTTCTGGCATGAGAGGGCCA+TGG | + | chr8.1:30071458-30071477 | MS.gene76382:CDS | 55.0% |
!! | GTGGTTGTTGGGGTTGGTGT+CGG | - | chr8.1:30069980-30069999 | None:intergenic | 55.0% |
!! | TCGACTTGGTTCCGACGGTA+CGG | + | chr8.1:30071035-30071054 | MS.gene76382:CDS | 55.0% |
!! | TGGTTGTTGGGGTTGGTGTC+GGG | - | chr8.1:30069979-30069998 | None:intergenic | 55.0% |
!!! | CCGTGGAGAGAGGCGTTTTA+CGG | + | chr8.1:30071318-30071337 | MS.gene76382:CDS | 55.0% |
AAGAACGACGCCGTGGAGAG+AGG | + | chr8.1:30071308-30071327 | MS.gene76382:CDS | 60.0% | |
CAACGGCTACGATCACCCAC+CGG | + | chr8.1:30070496-30070515 | MS.gene76382:CDS | 60.0% | |
CCAAGCTGACGTGGCAACCA+TGG | - | chr8.1:30071478-30071497 | None:intergenic | 60.0% | |
CCACGGCGTCGTTCTTCTTC+CGG | - | chr8.1:30071304-30071323 | None:intergenic | 60.0% | |
CCATGGTTGCCACGTCAGCT+TGG | + | chr8.1:30071475-30071494 | MS.gene76382:CDS | 60.0% | |
CCGCCGCAATTATCTTCGGC+CGG | - | chr8.1:30071272-30071291 | None:intergenic | 60.0% | |
CCGGCCGAAGATAATTGCGG+CGG | + | chr8.1:30071269-30071288 | MS.gene76382:CDS | 60.0% | |
CGGTGTAGCGGTTTACCGGT+GGG | - | chr8.1:30070514-30070533 | None:intergenic | 60.0% | |
CTAACACCGCCAAGCTGACG+TGG | - | chr8.1:30071487-30071506 | None:intergenic | 60.0% | |
GATGAGGAAACCGCAGGAGG+AGG | - | chr8.1:30069890-30069909 | None:intergenic | 60.0% | |
GCCGAAGATAATTGCGGCGG+TGG | + | chr8.1:30071272-30071291 | MS.gene76382:CDS | 60.0% | |
GCTGGAGTCGTTGGATGCCT+CGG | + | chr8.1:30071194-30071213 | MS.gene76382:CDS | 60.0% | |
TCGGTGTAGCGGTTTACCGG+TGG | - | chr8.1:30070515-30070534 | None:intergenic | 60.0% | |
TCGTATTACCGCCGTCGTGC+CGG | + | chr8.1:30070831-30070850 | MS.gene76382:CDS | 60.0% | |
TGGTTGCCACGTCAGCTTGG+CGG | + | chr8.1:30071478-30071497 | MS.gene76382:CDS | 60.0% | |
TGTCGACGGTGAGGGATGGA+CGG | + | chr8.1:30071107-30071126 | MS.gene76382:CDS | 60.0% | |
! | CAACTGCACCGGCCTCATTC+CGG | - | chr8.1:30071346-30071365 | None:intergenic | 60.0% |
! | CAGCTTGTCGTTTCGCCACG+TGG | - | chr8.1:30071428-30071447 | None:intergenic | 60.0% |
!! | CGTTTTACGGCGCCGGAATG+AGG | + | chr8.1:30071331-30071350 | MS.gene76382:CDS | 60.0% |
!! | GGCTCGGTGTAGCGGTTTAC+CGG | - | chr8.1:30070518-30070537 | None:intergenic | 60.0% |
!! | GTTGGGGTTGGTGTCGGGTT+GGG | - | chr8.1:30069974-30069993 | None:intergenic | 60.0% |
!! | GTTGGTGTCGGGTTGGGAGT+TGG | - | chr8.1:30069968-30069987 | None:intergenic | 60.0% |
!! | TGAAACGCGGCTCGGTGTAG+CGG | - | chr8.1:30070526-30070545 | None:intergenic | 60.0% |
!! | TGTTGGGGTTGGTGTCGGGT+TGG | - | chr8.1:30069975-30069994 | None:intergenic | 60.0% |
!!! | AGAGAGGCGTTTTACGGCGC+CGG | + | chr8.1:30071324-30071343 | MS.gene76382:CDS | 60.0% |
ATTGCGGCGGTGGAAGCTGC+CGG | + | chr8.1:30071282-30071301 | MS.gene76382:CDS | 65.0% | |
CCGGAAGAAGAACGACGCCG+TGG | + | chr8.1:30071301-30071320 | MS.gene76382:CDS | 65.0% | |
GGAGTCGTTGGATGCCTCGG+TGG | + | chr8.1:30071197-30071216 | MS.gene76382:CDS | 65.0% | |
GGCTGGAGGAGGAGGAGAGT+GGG | + | chr8.1:30071221-30071240 | MS.gene76382:CDS | 65.0% | |
GTCGTTGGATGCCTCGGTGG+CGG | + | chr8.1:30071200-30071219 | MS.gene76382:CDS | 65.0% | |
TATTACCGCCGTCGTGCCGG+AGG | + | chr8.1:30070834-30070853 | MS.gene76382:CDS | 65.0% | |
! | TTACGGCGCCGGAATGAGGC+CGG | + | chr8.1:30071335-30071354 | MS.gene76382:CDS | 65.0% |
ATGGACGGAGGCTGCAGCGG+CGG | + | chr8.1:30071122-30071141 | MS.gene76382:CDS | 70.0% | |
CGACGGTGAGGGATGGACGG+AGG | + | chr8.1:30071110-30071129 | MS.gene76382:CDS | 70.0% | |
CGGCTGGAGGAGGAGGAGAG+TGG | + | chr8.1:30071220-30071239 | MS.gene76382:CDS | 70.0% | |
CTGCAGCGGCGGCGTCGTTT+CGG | + | chr8.1:30071133-30071152 | MS.gene76382:CDS | 70.0% | |
GAGGAGGAGAGTGGGCGAGG+AGG | + | chr8.1:30071229-30071248 | MS.gene76382:CDS | 70.0% | |
GAGGAGGAGGAGAGTGGGCG+AGG | + | chr8.1:30071226-30071245 | MS.gene76382:CDS | 70.0% | |
GGCGTACTCCTCCGGCACGA+CGG | - | chr8.1:30070845-30070864 | None:intergenic | 70.0% | |
GGGATGGACGGAGGCTGCAG+CGG | + | chr8.1:30071119-30071138 | MS.gene76382:CDS | 70.0% | |
GTACTCCTCCGGCACGACGG+CGG | - | chr8.1:30070842-30070861 | None:intergenic | 70.0% | |
! | TTGGATGCCTCGGTGGCGGC+TGG | + | chr8.1:30071204-30071223 | MS.gene76382:CDS | 70.0% |
TCCTCCTCCAGCCGCCACCG+AGG | - | chr8.1:30071214-30071233 | None:intergenic | 75.0% | |
! | GATGCCTCGGTGGCGGCTGG+AGG | + | chr8.1:30071207-30071226 | MS.gene76382:CDS | 75.0% |
! | TCGGTGGCGGCTGGAGGAGG+AGG | + | chr8.1:30071213-30071232 | MS.gene76382:CDS | 75.0% |
! | GCGGCGGCGTCGTTTCGGCG+TGG | + | chr8.1:30071138-30071157 | MS.gene76382:CDS | 80.0% |
!! | GCCTCGGTGGCGGCTGGAGG+AGG | + | chr8.1:30071210-30071229 | MS.gene76382:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 30069878 | 30071506 | 30069878 | ID=MS.gene76382 |
chr8.1 | mRNA | 30069878 | 30071506 | 30069878 | ID=MS.gene76382.t1;Parent=MS.gene76382 |
chr8.1 | exon | 30069878 | 30071506 | 30069878 | ID=MS.gene76382.t1.exon1;Parent=MS.gene76382.t1 |
chr8.1 | CDS | 30069878 | 30071506 | 30069878 | ID=cds.MS.gene76382.t1;Parent=MS.gene76382.t1 |
Gene Sequence |
Protein sequence |