Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76397.t1 | XP_012574626.1 | 54.7 | 453 | 120 | 3 | 1 | 368 | 1 | 453 | 4.10E-125 | 458.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76397.t1 | O82289 | 35.6 | 430 | 191 | 6 | 21 | 368 | 47 | 472 | 3.5e-69 | 264.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76397.t1 | A0A1S3EGX7 | 54.7 | 453 | 120 | 3 | 1 | 368 | 1 | 453 | 2.9e-125 | 458.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene76397.t1 | TF | TUB |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76397.t1 | MTR_2g090130 | 56.151 | 317 | 39 | 3 | 1 | 317 | 1 | 217 | 1.35e-105 | 318 |
MS.gene76397.t1 | MTR_7g011550 | 67.257 | 226 | 74 | 0 | 143 | 368 | 229 | 454 | 8.34e-100 | 315 |
MS.gene76397.t1 | MTR_7g011550 | 56.962 | 158 | 55 | 1 | 1 | 145 | 1 | 158 | 1.28e-47 | 175 |
MS.gene76397.t1 | MTR_5g029580 | 66.184 | 207 | 70 | 0 | 143 | 349 | 42 | 248 | 1.28e-90 | 285 |
MS.gene76397.t1 | MTR_1g112330 | 48.163 | 245 | 124 | 2 | 103 | 347 | 214 | 455 | 6.95e-67 | 226 |
MS.gene76397.t1 | MTR_1g112330 | 54.545 | 132 | 58 | 1 | 20 | 151 | 44 | 173 | 1.59e-38 | 148 |
MS.gene76397.t1 | MTR_1g112330 | 47.059 | 255 | 132 | 2 | 103 | 357 | 214 | 465 | 2.30e-66 | 227 |
MS.gene76397.t1 | MTR_1g112330 | 54.545 | 132 | 58 | 1 | 20 | 151 | 44 | 173 | 5.68e-38 | 148 |
MS.gene76397.t1 | MTR_1g112330 | 47.059 | 255 | 132 | 2 | 103 | 357 | 214 | 465 | 3.13e-66 | 226 |
MS.gene76397.t1 | MTR_1g112330 | 54.545 | 132 | 58 | 1 | 20 | 151 | 44 | 173 | 6.46e-38 | 148 |
MS.gene76397.t1 | MTR_5g032190 | 52.792 | 197 | 91 | 1 | 161 | 357 | 264 | 458 | 3.16e-63 | 216 |
MS.gene76397.t1 | MTR_5g032190 | 53.846 | 117 | 54 | 0 | 23 | 139 | 47 | 163 | 6.86e-35 | 138 |
MS.gene76397.t1 | MTR_5g032190 | 52.792 | 197 | 91 | 1 | 161 | 357 | 264 | 458 | 5.33e-63 | 216 |
MS.gene76397.t1 | MTR_5g032190 | 53.846 | 117 | 54 | 0 | 23 | 139 | 47 | 163 | 1.00e-34 | 138 |
MS.gene76397.t1 | MTR_5g032190 | 52.792 | 197 | 91 | 1 | 161 | 357 | 264 | 458 | 1.56e-62 | 217 |
MS.gene76397.t1 | MTR_5g032190 | 53.846 | 117 | 54 | 0 | 23 | 139 | 47 | 163 | 2.03e-34 | 138 |
MS.gene76397.t1 | MTR_8g077640 | 56.291 | 151 | 43 | 3 | 482 | 609 | 234 | 384 | 1.44e-45 | 166 |
MS.gene76397.t1 | MTR_8g077640 | 56.757 | 111 | 43 | 1 | 361 | 466 | 26 | 136 | 4.16e-23 | 102 |
MS.gene76397.t1 | MTR_8g077195 | 71.111 | 90 | 23 | 1 | 380 | 466 | 5 | 94 | 7.23e-33 | 131 |
MS.gene76397.t1 | MTR_8g077195 | 48.800 | 125 | 41 | 3 | 506 | 608 | 279 | 402 | 6.17e-24 | 105 |
MS.gene76397.t1 | MTR_8g077675 | 69.048 | 84 | 24 | 1 | 380 | 463 | 5 | 86 | 3.24e-30 | 123 |
MS.gene76397.t1 | MTR_7g061850 | 65.060 | 83 | 29 | 0 | 142 | 224 | 41 | 123 | 6.61e-27 | 106 |
MS.gene76397.t1 | MTR_4g105740 | 34.409 | 186 | 109 | 5 | 163 | 344 | 46 | 222 | 1.69e-26 | 110 |
MS.gene76397.t1 | MTR_8g077620 | 63.953 | 86 | 27 | 2 | 381 | 463 | 6 | 90 | 2.56e-26 | 111 |
MS.gene76397.t1 | MTR_8g077620 | 46.400 | 125 | 56 | 4 | 496 | 610 | 262 | 385 | 1.84e-22 | 100 |
MS.gene76397.t1 | MTR_4g105740 | 34.409 | 186 | 109 | 5 | 163 | 344 | 46 | 222 | 2.58e-26 | 110 |
MS.gene76397.t1 | MTR_3g077870 | 33.520 | 179 | 108 | 5 | 165 | 340 | 61 | 231 | 2.38e-23 | 101 |
MS.gene76397.t1 | MTR_8g088250 | 31.250 | 192 | 116 | 6 | 161 | 339 | 15 | 203 | 2.96e-23 | 100 |
MS.gene76397.t1 | MTR_5g020580 | 54.348 | 92 | 37 | 2 | 380 | 466 | 5 | 96 | 1.91e-22 | 100 |
MS.gene76397.t1 | MTR_5g020580 | 54.945 | 91 | 38 | 2 | 520 | 608 | 317 | 406 | 9.22e-20 | 92.4 |
MS.gene76397.t1 | MTR_8g077650 | 51.327 | 113 | 34 | 4 | 506 | 608 | 225 | 326 | 1.04e-20 | 94.0 |
MS.gene76397.t1 | MTR_2g090125 | 76.923 | 52 | 12 | 0 | 331 | 382 | 115 | 166 | 5.71e-20 | 88.6 |
MS.gene76397.t1 | MTR_7g011880 | 52.632 | 76 | 32 | 1 | 267 | 342 | 55 | 126 | 2.41e-17 | 80.9 |
MS.gene76397.t1 | MTR_1g022370 | 53.488 | 86 | 37 | 2 | 525 | 608 | 328 | 412 | 5.09e-16 | 81.3 |
MS.gene76397.t1 | MTR_1g022370 | 40.385 | 104 | 42 | 3 | 380 | 463 | 5 | 108 | 1.47e-12 | 70.5 |
MS.gene76397.t1 | MTR_1g088960 | 45.263 | 95 | 50 | 2 | 514 | 608 | 300 | 392 | 3.31e-14 | 75.5 |
MS.gene76397.t1 | MTR_1g023800 | 47.727 | 88 | 40 | 3 | 380 | 463 | 5 | 90 | 4.50e-14 | 70.5 |
MS.gene76397.t1 | MTR_7g011640 | 43.529 | 85 | 31 | 1 | 77 | 161 | 15 | 82 | 2.08e-13 | 68.6 |
MS.gene76397.t1 | MTR_2g020280 | 41.463 | 82 | 47 | 1 | 527 | 608 | 204 | 284 | 5.51e-12 | 67.4 |
MS.gene76397.t1 | MTR_2g007930 | 65.909 | 44 | 15 | 0 | 420 | 463 | 49 | 92 | 7.30e-12 | 68.2 |
MS.gene76397.t1 | MTR_2g007930 | 33.333 | 141 | 83 | 3 | 478 | 608 | 278 | 417 | 2.95e-11 | 66.2 |
MS.gene76397.t1 | MTR_2g020280 | 41.463 | 82 | 47 | 1 | 527 | 608 | 303 | 383 | 9.83e-12 | 67.4 |
MS.gene76397.t1 | MTR_1g098790 | 52.542 | 59 | 26 | 1 | 405 | 463 | 35 | 91 | 3.02e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76397.t1 | AT2G35510 | 48.325 | 209 | 103 | 3 | 161 | 368 | 268 | 472 | 3.15e-56 | 199 |
MS.gene76397.t1 | AT2G35510 | 37.500 | 120 | 75 | 0 | 20 | 139 | 46 | 165 | 6.28e-21 | 97.4 |
MS.gene76397.t1 | AT2G35510 | 48.325 | 209 | 103 | 3 | 161 | 368 | 268 | 472 | 3.15e-56 | 199 |
MS.gene76397.t1 | AT2G35510 | 37.500 | 120 | 75 | 0 | 20 | 139 | 46 | 165 | 6.28e-21 | 97.4 |
MS.gene76397.t1 | AT2G35510 | 53.333 | 180 | 80 | 2 | 161 | 340 | 268 | 443 | 3.55e-56 | 197 |
MS.gene76397.t1 | AT2G35510 | 37.500 | 120 | 75 | 0 | 20 | 139 | 46 | 165 | 3.33e-21 | 97.4 |
MS.gene76397.t1 | AT1G32230 | 52.514 | 179 | 83 | 1 | 162 | 340 | 273 | 449 | 1.36e-52 | 190 |
MS.gene76397.t1 | AT1G32230 | 34.524 | 168 | 79 | 5 | 1 | 139 | 1 | 166 | 9.51e-21 | 96.7 |
MS.gene76397.t1 | AT1G32230 | 52.514 | 179 | 83 | 1 | 162 | 340 | 273 | 449 | 1.73e-52 | 190 |
MS.gene76397.t1 | AT1G32230 | 34.524 | 168 | 79 | 5 | 1 | 139 | 1 | 166 | 1.07e-20 | 96.7 |
MS.gene76397.t1 | AT1G32230 | 52.514 | 179 | 83 | 1 | 162 | 340 | 273 | 449 | 1.77e-52 | 190 |
MS.gene76397.t1 | AT1G32230 | 34.524 | 168 | 79 | 5 | 1 | 139 | 1 | 166 | 1.07e-20 | 96.7 |
MS.gene76397.t1 | AT1G32230 | 52.514 | 179 | 83 | 1 | 162 | 340 | 273 | 449 | 1.77e-52 | 190 |
MS.gene76397.t1 | AT1G32230 | 34.524 | 168 | 79 | 5 | 1 | 139 | 1 | 166 | 1.07e-20 | 96.7 |
MS.gene76397.t1 | AT1G32230 | 52.514 | 179 | 83 | 1 | 162 | 340 | 273 | 449 | 1.77e-52 | 190 |
MS.gene76397.t1 | AT1G32230 | 34.524 | 168 | 79 | 5 | 1 | 139 | 1 | 166 | 1.07e-20 | 96.7 |
MS.gene76397.t1 | AT1G32230 | 52.514 | 179 | 83 | 1 | 162 | 340 | 273 | 449 | 1.77e-52 | 190 |
MS.gene76397.t1 | AT1G32230 | 34.524 | 168 | 79 | 5 | 1 | 139 | 1 | 166 | 1.07e-20 | 96.7 |
MS.gene76397.t1 | AT1G23550 | 36.548 | 197 | 105 | 8 | 159 | 342 | 50 | 239 | 6.84e-32 | 126 |
MS.gene76397.t1 | AT1G70440 | 33.333 | 192 | 120 | 4 | 159 | 343 | 42 | 232 | 5.38e-28 | 114 |
MS.gene76397.t1 | AT1G70440 | 33.333 | 192 | 120 | 4 | 159 | 343 | 42 | 232 | 5.38e-28 | 114 |
MS.gene76397.t1 | AT5G62520 | 36.585 | 164 | 90 | 5 | 189 | 345 | 77 | 233 | 9.79e-26 | 106 |
MS.gene76397.t1 | AT5G62520 | 34.682 | 173 | 99 | 5 | 182 | 345 | 66 | 233 | 3.40e-25 | 107 |
MS.gene76397.t1 | AT2G18280 | 50.000 | 86 | 37 | 2 | 380 | 463 | 5 | 86 | 6.56e-16 | 80.5 |
MS.gene76397.t1 | AT2G18280 | 46.512 | 86 | 43 | 2 | 525 | 608 | 299 | 383 | 5.17e-14 | 74.7 |
MS.gene76397.t1 | AT2G18280 | 50.000 | 86 | 37 | 2 | 380 | 463 | 5 | 86 | 6.56e-16 | 80.5 |
MS.gene76397.t1 | AT2G18280 | 46.512 | 86 | 43 | 2 | 525 | 608 | 299 | 383 | 5.17e-14 | 74.7 |
MS.gene76397.t1 | AT3G47720 | 29.148 | 223 | 121 | 8 | 145 | 342 | 27 | 237 | 1.00e-14 | 75.9 |
MS.gene76397.t1 | AT1G47270 | 46.067 | 89 | 42 | 2 | 525 | 608 | 291 | 378 | 1.30e-13 | 73.6 |
MS.gene76397.t1 | AT1G47270 | 46.067 | 89 | 42 | 2 | 525 | 608 | 316 | 403 | 1.48e-13 | 73.6 |
MS.gene76397.t1 | AT1G47270 | 46.067 | 89 | 42 | 2 | 525 | 608 | 315 | 402 | 1.60e-13 | 73.2 |
MS.gene76397.t1 | AT1G25280 | 41.584 | 101 | 45 | 2 | 521 | 608 | 158 | 257 | 1.29e-12 | 68.9 |
MS.gene76397.t1 | AT1G25280 | 41.584 | 101 | 45 | 2 | 521 | 608 | 158 | 257 | 1.29e-12 | 68.9 |
MS.gene76397.t1 | AT1G25280 | 48.649 | 74 | 35 | 2 | 390 | 463 | 27 | 97 | 5.11e-12 | 68.9 |
MS.gene76397.t1 | AT1G25280 | 41.584 | 101 | 45 | 2 | 521 | 608 | 336 | 435 | 5.48e-12 | 68.6 |
MS.gene76397.t1 | AT5G18680 | 41.379 | 87 | 46 | 1 | 527 | 608 | 201 | 287 | 5.63e-12 | 67.4 |
MS.gene76397.t1 | AT1G76900 | 65.909 | 44 | 15 | 0 | 420 | 463 | 52 | 95 | 7.85e-12 | 68.2 |
MS.gene76397.t1 | AT1G76900 | 65.909 | 44 | 15 | 0 | 420 | 463 | 52 | 95 | 7.85e-12 | 68.2 |
MS.gene76397.t1 | AT1G76900 | 65.909 | 44 | 15 | 0 | 420 | 463 | 52 | 95 | 7.85e-12 | 68.2 |
MS.gene76397.t1 | AT2G47900 | 37.755 | 98 | 60 | 1 | 511 | 608 | 300 | 396 | 2.20e-11 | 66.6 |
MS.gene76397.t1 | AT2G47900 | 38.372 | 86 | 51 | 2 | 380 | 463 | 5 | 90 | 3.82e-11 | 65.9 |
MS.gene76397.t1 | AT2G47900 | 37.755 | 98 | 60 | 1 | 511 | 608 | 300 | 396 | 2.20e-11 | 66.6 |
MS.gene76397.t1 | AT2G47900 | 38.372 | 86 | 51 | 2 | 380 | 463 | 5 | 90 | 3.82e-11 | 65.9 |
MS.gene76397.t1 | AT2G47900 | 37.755 | 98 | 60 | 1 | 511 | 608 | 301 | 397 | 2.23e-11 | 66.6 |
MS.gene76397.t1 | AT2G47900 | 38.372 | 86 | 51 | 2 | 380 | 463 | 5 | 90 | 3.94e-11 | 65.9 |
Find 130 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCTCCTGCATTGCAAAAT+TGG | 0.167272 | 8.1:+30247532 | MS.gene76397:CDS |
TCTTGGTATTTCTAGCTTCT+TGG | 0.199787 | 8.1:+30241798 | MS.gene76397:CDS |
TTGTGAGATCAGCTTGCTTT+TGG | 0.263572 | 8.1:-30242281 | None:intergenic |
CCAGGATTTATTTGAACAAT+AGG | 0.264395 | 8.1:+30241821 | MS.gene76397:CDS |
CCGTGTCATAATGGGGAAAA+TGG | 0.276874 | 8.1:+30242667 | MS.gene76397:CDS |
TGAATCTATAGATGGAAAAT+TGG | 0.283505 | 8.1:+30242137 | MS.gene76397:CDS |
TCTACCACATGAATTGCTTT+TGG | 0.292282 | 8.1:+30246453 | MS.gene76397:CDS |
GTACGGGAGATGTTTCTTAC+AGG | 0.302060 | 8.1:+30242171 | MS.gene76397:CDS |
CATGGCTTTGCTTTATTAAG+AGG | 0.309230 | 8.1:+30246748 | MS.gene76397:CDS |
TCTCCATTCAATGACATATA+TGG | 0.316360 | 8.1:+30242405 | MS.gene76397:CDS |
AGTGGTTACGAATATGATAA+TGG | 0.323939 | 8.1:+30242725 | MS.gene76397:CDS |
TTGAAGCTGACAACAAATTC+AGG | 0.325859 | 8.1:-30242815 | None:intergenic |
TGAAAATGAAATTAAGCATT+TGG | 0.329909 | 8.1:+30242637 | MS.gene76397:CDS |
TGGTTGGGGTGCTGACTTCA+TGG | 0.331126 | 8.1:+30247449 | MS.gene76397:CDS |
CCCTGTTGAATAGGTTCAAT+TGG | 0.340120 | 8.1:-30246418 | None:intergenic |
CTGATCTCACAAAAGGAATT+CGG | 0.342207 | 8.1:+30242292 | MS.gene76397:CDS |
TTGAAGAGAGTGAGAGATAT+TGG | 0.344771 | 8.1:+30246491 | MS.gene76397:CDS |
TCCAATTGAACCTATTCAAC+AGG | 0.359438 | 8.1:+30246417 | MS.gene76397:CDS |
TGCTTTCCTACATGCAAGAT+TGG | 0.359787 | 8.1:-30247555 | None:intergenic |
TGATCTCACAAAAGGAATTC+GGG | 0.361358 | 8.1:+30242293 | MS.gene76397:CDS |
GTGGTTACGAATATGATAAT+GGG | 0.370956 | 8.1:+30242726 | MS.gene76397:CDS |
GCCCATTGTCCCTGTTGAAT+AGG | 0.371158 | 8.1:-30246427 | None:intergenic |
CTTACAGGAATGACTGCTTT+GGG | 0.373340 | 8.1:+30242186 | MS.gene76397:CDS |
TGAATTTGTTGTCAGCTTCA+AGG | 0.379518 | 8.1:+30242817 | MS.gene76397:CDS |
TGTCAGCTTCAAGGCCCCTT+TGG | 0.383181 | 8.1:+30242826 | MS.gene76397:CDS |
GAATATTGTTGACTTGGTTA+AGG | 0.396022 | 8.1:+30241906 | MS.gene76397:CDS |
TCTTACAGGAATGACTGCTT+TGG | 0.410682 | 8.1:+30242185 | MS.gene76397:CDS |
GCAGATGGCAAAGGCTTGTA+AGG | 0.435286 | 8.1:-30247625 | None:intergenic |
GACCAGAGCACTATGTGGTT+TGG | 0.436841 | 8.1:+30242765 | MS.gene76397:CDS |
CCTATTGTTCAAATAAATCC+TGG | 0.441325 | 8.1:-30241821 | None:intergenic |
GCTTACACTGAATCTATAGA+TGG | 0.446337 | 8.1:+30242129 | MS.gene76397:CDS |
GTGCTTCGGTATGTAAATCA+TGG | 0.451227 | 8.1:+30246539 | MS.gene76397:CDS |
GGATGAGCAACACAATGGTT+GGG | 0.451426 | 8.1:+30247434 | MS.gene76397:CDS |
TCCAGAGAATATTGTTGACT+TGG | 0.452631 | 8.1:+30241900 | MS.gene76397:CDS |
TTTGCCATCTGCTTGATTCG+TGG | 0.452748 | 8.1:+30247636 | MS.gene76397:CDS |
ACCTATTCAACAGGGACAAT+GGG | 0.456062 | 8.1:+30246426 | MS.gene76397:CDS |
TCCTCGTCAATCCAAGCAAT+GGG | 0.456382 | 8.1:-30242039 | None:intergenic |
ACCAAGTCAACAATATTCTC+TGG | 0.458208 | 8.1:-30241901 | None:intergenic |
GTATTTCTAGCTTCTTGGCC+AGG | 0.463969 | 8.1:+30241803 | MS.gene76397:CDS |
TCACAGTTTCCACTCTAAAA+CGG | 0.468242 | 8.1:-30247473 | None:intergenic |
CTTATAAAACATCAAACGTA+TGG | 0.469316 | 8.1:-30241857 | None:intergenic |
TATTTGAACAATAGGAAAAG+TGG | 0.469378 | 8.1:+30241829 | MS.gene76397:CDS |
AAACCATATGACTCTGGTCT+TGG | 0.472168 | 8.1:+30241781 | MS.gene76397:CDS |
GTCAAACTCACATCTTGCTC+TGG | 0.476106 | 8.1:+30246387 | MS.gene76397:CDS |
CTTCACCTTTAAAATCCAAA+GGG | 0.478992 | 8.1:-30242841 | None:intergenic |
AGTCCATATATGTCATTGAA+TGG | 0.482387 | 8.1:-30242408 | None:intergenic |
ATTTGAACAATAGGAAAAGT+GGG | 0.483205 | 8.1:+30241830 | MS.gene76397:CDS |
AAGCATGGTCGGAGAAATCA+AGG | 0.483624 | 8.1:+30246309 | MS.gene76397:intron |
CATGGATAAGCACGGGGACC+AGG | 0.484337 | 8.1:-30246729 | None:intergenic |
TCTCACTCTCTTCAACCCTT+CGG | 0.484378 | 8.1:-30246483 | None:intergenic |
GTATCATCTAGACTTGAAAA+CGG | 0.487700 | 8.1:+30242005 | MS.gene76397:CDS |
TTATAAGAACAACAATTGGT+TGG | 0.488868 | 8.1:+30241873 | MS.gene76397:CDS |
GGGATGAGCAACACAATGGT+TGG | 0.490209 | 8.1:+30247433 | MS.gene76397:CDS |
GAATATGGACTTCGTCGCTA+TGG | 0.495947 | 8.1:+30242378 | MS.gene76397:CDS |
TACATTGCATCAAATACATC+AGG | 0.496649 | 8.1:-30246790 | None:intergenic |
GGTAGAGTTAGATGGTCAAG+AGG | 0.498759 | 8.1:+30241960 | MS.gene76397:CDS |
CTGGTCCCCGTGCTTATCCA+TGG | 0.499025 | 8.1:+30246730 | MS.gene76397:CDS |
TATCATCTAGACTTGAAAAC+GGG | 0.499321 | 8.1:+30242006 | MS.gene76397:CDS |
TTCCAAACCACATAGTGCTC+TGG | 0.508406 | 8.1:-30242767 | None:intergenic |
AAAACTTCAAAGACATTGGA+TGG | 0.520035 | 8.1:+30241682 | MS.gene76397:CDS |
AAGCAAGCTGATCTCACAAA+AGG | 0.520071 | 8.1:+30242285 | MS.gene76397:CDS |
ACTTCACCTTTAAAATCCAA+AGG | 0.520870 | 8.1:-30242842 | None:intergenic |
ATACCAAGACCAGAGTCATA+TGG | 0.521112 | 8.1:-30241784 | None:intergenic |
GTGGCTTGCTTGTTCTAAAG+AGG | 0.524851 | 8.1:+30242338 | MS.gene76397:CDS |
GTTGATATTTACCGCAACTC+AGG | 0.529160 | 8.1:+30242228 | MS.gene76397:CDS |
GCAAAGCCATGGATAAGCAC+GGG | 0.532440 | 8.1:-30246736 | None:intergenic |
CAAAATTAATAAAGCAAATG+TGG | 0.533166 | 8.1:+30241936 | MS.gene76397:CDS |
TTCCTCGTCAATCCAAGCAA+TGG | 0.534091 | 8.1:-30242040 | None:intergenic |
TTCAATGACATATATGGACT+TGG | 0.534761 | 8.1:+30242411 | MS.gene76397:CDS |
TTGCTTGGATTGACGAGGAA+GGG | 0.538053 | 8.1:+30242043 | MS.gene76397:CDS |
AAAATGGAGCTTCTTCGTCC+AGG | 0.540371 | 8.1:+30242683 | MS.gene76397:CDS |
CATGTCAATGCAAACACGAC+TGG | 0.541246 | 8.1:+30242251 | MS.gene76397:CDS |
AATGAGACTTGGCTCAGTGC+TGG | 0.542748 | 8.1:-30247375 | None:intergenic |
AACCTATTCAACAGGGACAA+TGG | 0.542913 | 8.1:+30246425 | MS.gene76397:CDS |
GGTTGGGGTGCTGACTTCAT+GGG | 0.547030 | 8.1:+30247450 | MS.gene76397:CDS |
ACTTCCGCTTGAAATCATCA+TGG | 0.547250 | 8.1:-30243875 | None:intergenic |
GGTTGTCAAGCAAATGAGAT+TGG | 0.547866 | 8.1:+30241744 | MS.gene76397:CDS |
AAATTCTCGCTCTCAGCACC+CGG | 0.552546 | 8.1:-30246355 | None:intergenic |
TGGTGTTCATCTTGCAACTG+TGG | 0.556406 | 8.1:+30242431 | MS.gene76397:CDS |
GTTAGTAAACCATATGACTC+TGG | 0.558332 | 8.1:+30241775 | MS.gene76397:CDS |
TGAAGCTGACAACAAATTCA+GGG | 0.564436 | 8.1:-30242814 | None:intergenic |
AAAGTTTCATCAAATACAGA+AGG | 0.566100 | 8.1:-30247342 | None:intergenic |
TAAAGGTCTCAAATGAGACT+TGG | 0.571910 | 8.1:-30247386 | None:intergenic |
AGTGATCAACATTGTTCAAG+TGG | 0.572970 | 8.1:+30242707 | MS.gene76397:CDS |
TTATAAAACATCAAACGTAT+GGG | 0.573417 | 8.1:-30241856 | None:intergenic |
ATTGCTTGGATTGACGAGGA+AGG | 0.575581 | 8.1:+30242042 | MS.gene76397:CDS |
CTGTGGCTCGTCCTTATGCA+TGG | 0.579478 | 8.1:+30242448 | MS.gene76397:CDS |
AATTGGACGAAGATTCTGTA+CGG | 0.583896 | 8.1:+30242154 | MS.gene76397:CDS |
ATGATTTCAAGCGGAAGTTG+AGG | 0.584121 | 8.1:+30243880 | MS.gene76397:CDS |
ATTGGACGAAGATTCTGTAC+GGG | 0.585248 | 8.1:+30242155 | MS.gene76397:CDS |
AAGACGACAGCAGAACGCGC+AGG | 0.587124 | 8.1:-30246514 | None:intergenic |
CTTCCGCTTGAAATCATCAT+GGG | 0.587362 | 8.1:-30243874 | None:intergenic |
TCAAATGAGAGTAAGAAAGA+TGG | 0.588792 | 8.1:+30243131 | MS.gene76397:CDS |
AATGTGGAGGTAGAGTTAGA+TGG | 0.589106 | 8.1:+30241952 | MS.gene76397:CDS |
AGCAAAGCCATGGATAAGCA+CGG | 0.591840 | 8.1:-30246737 | None:intergenic |
CTCTTAATAAAGCAAAGCCA+TGG | 0.593697 | 8.1:-30246747 | None:intergenic |
AAGCCACGCATAGCGAACAT+TGG | 0.596102 | 8.1:-30242322 | None:intergenic |
ATGGCATTGAAAAGCATGGT+CGG | 0.597357 | 8.1:+30246298 | MS.gene76397:intron |
AATGTCGTATATAGTAAACT+TGG | 0.599300 | 8.1:-30247316 | None:intergenic |
AAGCCAATGTTCGCTATGCG+TGG | 0.600697 | 8.1:+30242319 | MS.gene76397:CDS |
AATTGGCCAATCTTGCATGT+AGG | 0.601422 | 8.1:+30247549 | MS.gene76397:CDS |
ACGAATCAAGCAGATGGCAA+AGG | 0.605785 | 8.1:-30247634 | None:intergenic |
GCATTGACATGCCTGAGTTG+CGG | 0.614600 | 8.1:-30242239 | None:intergenic |
ACTTGGCTCAGTGCTGGTGA+AGG | 0.615559 | 8.1:-30247369 | None:intergenic |
GATGAGCAACACAATGGTTG+GGG | 0.615639 | 8.1:+30247435 | MS.gene76397:CDS |
TATGAGATCGATCAACTACA+AGG | 0.618807 | 8.1:-30247506 | None:intergenic |
AGTTTCAACATCAACAAATG+TGG | 0.625503 | 8.1:+30241723 | MS.gene76397:CDS |
ATCTCACAAAAGGAATTCGG+GGG | 0.626263 | 8.1:+30242295 | MS.gene76397:CDS |
GAACAATGTTGATCACTACC+TGG | 0.626568 | 8.1:-30242701 | None:intergenic |
TTTCCCATGATGATTTCAAG+CGG | 0.628030 | 8.1:+30243871 | MS.gene76397:CDS |
TATGCCACGAATCAAGCAGA+TGG | 0.633849 | 8.1:-30247640 | None:intergenic |
TGGCTCTGAGCATTCTACAA+TGG | 0.638821 | 8.1:+30243151 | MS.gene76397:CDS |
AAGCAAATGAGATTGGTTGA+AGG | 0.639590 | 8.1:+30241751 | MS.gene76397:CDS |
TCACAGACCAGAGCACTATG+TGG | 0.641673 | 8.1:+30242760 | MS.gene76397:CDS |
GATCTCACAAAAGGAATTCG+GGG | 0.653807 | 8.1:+30242294 | MS.gene76397:CDS |
ACCCATTGCTTGGATTGACG+AGG | 0.654846 | 8.1:+30242038 | MS.gene76397:CDS |
AAGGCTTGTAAGGAAGAGAG+TGG | 0.656514 | 8.1:-30247615 | None:intergenic |
GCATGGTCGGAGAAATCAAG+GGG | 0.659382 | 8.1:+30246311 | MS.gene76397:intron |
TGGTTACGAATATGATAATG+GGG | 0.659982 | 8.1:+30242727 | MS.gene76397:CDS |
CCAATTGAACCTATTCAACA+GGG | 0.662176 | 8.1:+30246418 | MS.gene76397:CDS |
TTCACCTTTAAAATCCAAAG+GGG | 0.666644 | 8.1:-30242840 | None:intergenic |
AATTAATAAAGCAAATGTGG+AGG | 0.677534 | 8.1:+30241939 | MS.gene76397:CDS |
TTACGAATATGATAATGGGG+TGG | 0.680937 | 8.1:+30242730 | MS.gene76397:CDS |
AGCATGGTCGGAGAAATCAA+GGG | 0.684102 | 8.1:+30246310 | MS.gene76397:intron |
ATGTCCAAAAGCAATTCATG+TGG | 0.684608 | 8.1:-30246457 | None:intergenic |
GATGGAACTGCACATCTGAG+TGG | 0.684772 | 8.1:+30241700 | MS.gene76397:CDS |
CAAAGCCATGGATAAGCACG+GGG | 0.695719 | 8.1:-30246735 | None:intergenic |
ATATGGGATGAGCAACACAA+TGG | 0.702664 | 8.1:+30247429 | MS.gene76397:CDS |
CTTCGGTATGTAAATCATGG+AGG | 0.713760 | 8.1:+30246542 | MS.gene76397:CDS |
TCTCACAAAAGGAATTCGGG+GGG | 0.718560 | 8.1:+30242296 | MS.gene76397:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATAATAATATTTATTTTA+AGG | + | chr8.1:30243938-30243957 | MS.gene76397:intron | 0.0% |
!! | AAAGAAAAATTGTTAAAAAT+TGG | - | chr8.1:30243250-30243269 | None:intergenic | 10.0% |
!! | AATAAATATTTGTATTTGTT+TGG | + | chr8.1:30246177-30246196 | MS.gene76397:intron | 10.0% |
!! | GGATATAAAAAAAATATATT+AGG | - | chr8.1:30243313-30243332 | None:intergenic | 10.0% |
!! | TATGTTAATTTATTTAAAGA+CGG | + | chr8.1:30244917-30244936 | MS.gene76397:intron | 10.0% |
!! | TGAAAGAATTATATATTAAT+TGG | - | chr8.1:30242974-30242993 | None:intergenic | 10.0% |
!!! | ATATTTTAATATTTAAGACA+CGG | - | chr8.1:30243812-30243831 | None:intergenic | 10.0% |
!!! | TGTATTTTAATTTTCATTTT+AGG | - | chr8.1:30244943-30244962 | None:intergenic | 10.0% |
!!! | TTATTTTCTTAAATTATTGT+CGG | + | chr8.1:30245858-30245877 | MS.gene76397:intron | 10.0% |
!! | AAAATAAAATAAAATCAGTG+TGG | + | chr8.1:30245509-30245528 | MS.gene76397:intron | 15.0% |
!! | ACATAAATAGGAAATTATTT+GGG | + | chr8.1:30245555-30245574 | MS.gene76397:intron | 15.0% |
!! | ATAAAAAAAATATATTAGGG+TGG | - | chr8.1:30243309-30243328 | None:intergenic | 15.0% |
!! | ATTAACAAGGTTTATTATTA+TGG | - | chr8.1:30245752-30245771 | None:intergenic | 15.0% |
!! | TACATAAATAGGAAATTATT+TGG | + | chr8.1:30245554-30245573 | MS.gene76397:intron | 15.0% |
!! | TCAGAAGATAAAAAAATATT+AGG | - | chr8.1:30243504-30243523 | None:intergenic | 15.0% |
!! | TTAAAAAAAAAAAATCTCCT+AGG | - | chr8.1:30244286-30244305 | None:intergenic | 15.0% |
!! | TTTATACTACTTATTAATCA+TGG | - | chr8.1:30244467-30244486 | None:intergenic | 15.0% |
!!! | CAATTTGATTTTTATACATA+TGG | + | chr8.1:30247273-30247292 | MS.gene76397:intron | 15.0% |
!!! | TATTTTAATATTTAAGACAC+GGG | - | chr8.1:30243811-30243830 | None:intergenic | 15.0% |
!! | AAAATACATGTAAGAGAAAT+AGG | - | chr8.1:30247005-30247024 | None:intergenic | 20.0% |
!! | AAGTAACAAAATCAATGATA+TGG | + | chr8.1:30245988-30246007 | MS.gene76397:intron | 20.0% |
!! | AATATGCAGTTTACATAAAT+AGG | + | chr8.1:30245543-30245562 | MS.gene76397:intron | 20.0% |
!! | ACATTATTGGAAGAAATATA+TGG | - | chr8.1:30245635-30245654 | None:intergenic | 20.0% |
!! | ATACCTTTAACAATGTATAA+TGG | - | chr8.1:30243767-30243786 | None:intergenic | 20.0% |
!! | ATAGCAAAAGAATATTAACA+AGG | - | chr8.1:30245765-30245784 | None:intergenic | 20.0% |
!! | ATTAAAACACTTCATGTTAT+TGG | - | chr8.1:30245682-30245701 | None:intergenic | 20.0% |
!! | CAAAAAGTCAATTAAACATT+AGG | - | chr8.1:30244136-30244155 | None:intergenic | 20.0% |
!! | CAAAATTAATAAAGCAAATG+TGG | + | chr8.1:30241936-30241955 | MS.gene76397:CDS | 20.0% |
!! | CAAACAAAGAATAACATTAT+TGG | - | chr8.1:30245648-30245667 | None:intergenic | 20.0% |
!! | GTAATAAAACAAAACGTTAT+AGG | - | chr8.1:30243405-30243424 | None:intergenic | 20.0% |
!! | GTTAAAATTTGGTATTAGTT+TGG | - | chr8.1:30243434-30243453 | None:intergenic | 20.0% |
!! | TACCTTTAACAATGTATAAT+GGG | - | chr8.1:30243766-30243785 | None:intergenic | 20.0% |
!! | TGAAAATGAAATTAAGCATT+TGG | + | chr8.1:30242637-30242656 | MS.gene76397:CDS | 20.0% |
!! | TGATAGTAACAAAAATACAA+AGG | - | chr8.1:30246219-30246238 | None:intergenic | 20.0% |
!! | TGTATAAAAATCAAATTGTG+AGG | - | chr8.1:30247271-30247290 | None:intergenic | 20.0% |
!! | TTATAAAACATCAAACGTAT+GGG | - | chr8.1:30241859-30241878 | None:intergenic | 20.0% |
!!! | AAATAAGAAACTCATTTTAG+AGG | - | chr8.1:30246074-30246093 | None:intergenic | 20.0% |
!!! | AAATCAATTATTTAGAACAC+CGG | + | chr8.1:30245268-30245287 | MS.gene76397:intron | 20.0% |
!!! | ATATTCAATGTCTTTGAAAA+AGG | - | chr8.1:30246843-30246862 | None:intergenic | 20.0% |
!!! | ATGTTTTATTTAGAAATGCA+TGG | + | chr8.1:30244377-30244396 | MS.gene76397:intron | 20.0% |
!!! | CAACACATGATATTTTTTAT+AGG | + | chr8.1:30243098-30243117 | MS.gene76397:intron | 20.0% |
!!! | TATTCAATGTCTTTGAAAAA+GGG | - | chr8.1:30246842-30246861 | None:intergenic | 20.0% |
!!! | TCCTATATTTTTTACATTAG+CGG | - | chr8.1:30244879-30244898 | None:intergenic | 20.0% |
!!! | TGTTTTATAAGAACAACAAT+TGG | + | chr8.1:30241869-30241888 | MS.gene76397:CDS | 20.0% |
!!! | TTCATGATTTTCTATGTAAA+AGG | + | chr8.1:30243213-30243232 | MS.gene76397:intron | 20.0% |
!!! | TTTTCTCTAGAAATTTAGTT+TGG | + | chr8.1:30243970-30243989 | MS.gene76397:intron | 20.0% |
!!! | TTTTGCTTCCATAAAAAAAA+TGG | + | chr8.1:30243710-30243729 | MS.gene76397:intron | 20.0% |
! | AAAAATATATTAGGGTGGAA+AGG | - | chr8.1:30243304-30243323 | None:intergenic | 25.0% |
! | AAAGTCAATTAAACATTAGG+AGG | - | chr8.1:30244133-30244152 | None:intergenic | 25.0% |
! | AAAGTTTCATCAAATACAGA+AGG | - | chr8.1:30247345-30247364 | None:intergenic | 25.0% |
! | AACCAAAATTGTTGAGATAA+AGG | - | chr8.1:30243604-30243623 | None:intergenic | 25.0% |
! | AAGAGAACATAAAAATCATG+AGG | - | chr8.1:30246689-30246708 | None:intergenic | 25.0% |
! | AATGTCGTATATAGTAAACT+TGG | - | chr8.1:30247319-30247338 | None:intergenic | 25.0% |
! | AATTAATAAAGCAAATGTGG+AGG | + | chr8.1:30241939-30241958 | MS.gene76397:CDS | 25.0% |
! | ACAAATATGTTTGTAAACTG+CGG | + | chr8.1:30247181-30247200 | MS.gene76397:intron | 25.0% |
! | ACCGCTAATGTAAAAAATAT+AGG | + | chr8.1:30244875-30244894 | MS.gene76397:intron | 25.0% |
! | ACTGTAAATTCTGTAATCAA+TGG | - | chr8.1:30246047-30246066 | None:intergenic | 25.0% |
! | AGAGAACATAAAAATCATGA+GGG | - | chr8.1:30246688-30246707 | None:intergenic | 25.0% |
! | ATAAAAACTAACCATGCATA+AGG | - | chr8.1:30242462-30242481 | None:intergenic | 25.0% |
! | ATATCTAACACTAACATACA+AGG | - | chr8.1:30242892-30242911 | None:intergenic | 25.0% |
! | ATCAAATTGTGAGGATTATA+CGG | - | chr8.1:30247262-30247281 | None:intergenic | 25.0% |
! | ATCATATGAGATTCTTCTTA+AGG | + | chr8.1:30243371-30243390 | MS.gene76397:intron | 25.0% |
! | ATCATCAAGTCAAACAAAAT+TGG | - | chr8.1:30246111-30246130 | None:intergenic | 25.0% |
! | ATCTTATGAGATTCTTCTTA+TGG | + | chr8.1:30243548-30243567 | MS.gene76397:intron | 25.0% |
! | ATTATTAATTGAACGCTAAG+AGG | + | chr8.1:30242570-30242589 | MS.gene76397:intron | 25.0% |
! | ATTTGAACAATAGGAAAAGT+GGG | + | chr8.1:30241830-30241849 | MS.gene76397:CDS | 25.0% |
! | CAAAAACAAGACTCTTATAT+GGG | + | chr8.1:30247413-30247432 | MS.gene76397:CDS | 25.0% |
! | CAACAAAAGATCAAAATGTA+CGG | - | chr8.1:30244006-30244025 | None:intergenic | 25.0% |
! | CATATGTAACTCTTTATCTA+TGG | + | chr8.1:30245125-30245144 | MS.gene76397:intron | 25.0% |
! | CCATATCAAAACTGAAAATT+AGG | - | chr8.1:30244324-30244343 | None:intergenic | 25.0% |
! | CTTATAAAACATCAAACGTA+TGG | - | chr8.1:30241860-30241879 | None:intergenic | 25.0% |
! | TAAAAATGGAATATCAAAGC+CGG | + | chr8.1:30246336-30246355 | MS.gene76397:CDS | 25.0% |
! | TATGAGTGTTATATATGTGT+CGG | + | chr8.1:30245213-30245232 | MS.gene76397:intron | 25.0% |
! | TATTTGAACAATAGGAAAAG+TGG | + | chr8.1:30241829-30241848 | MS.gene76397:CDS | 25.0% |
! | TCAAAAACAAGACTCTTATA+TGG | + | chr8.1:30247412-30247431 | MS.gene76397:CDS | 25.0% |
! | TCTGATATATTGACACATTT+AGG | + | chr8.1:30243519-30243538 | MS.gene76397:intron | 25.0% |
! | TGAATCTATAGATGGAAAAT+TGG | + | chr8.1:30242137-30242156 | MS.gene76397:CDS | 25.0% |
! | TGGAATTATGGTTATTACTT+CGG | + | chr8.1:30245483-30245502 | MS.gene76397:intron | 25.0% |
! | TGTAGATAAGAAACATAATC+CGG | - | chr8.1:30243743-30243762 | None:intergenic | 25.0% |
! | TTAAAATTGTGCATTTGGAT+AGG | + | chr8.1:30246243-30246262 | MS.gene76397:intron | 25.0% |
! | TTAAGAAAATAACATCGTGT+CGG | - | chr8.1:30245850-30245869 | None:intergenic | 25.0% |
! | TTATAAGAACAACAATTGGT+TGG | + | chr8.1:30241873-30241892 | MS.gene76397:CDS | 25.0% |
!! | AGAGTTTAAAATTGTGCATT+TGG | + | chr8.1:30246238-30246257 | MS.gene76397:intron | 25.0% |
!! | TACCTTTATCTCAACAATTT+TGG | + | chr8.1:30243599-30243618 | MS.gene76397:intron | 25.0% |
!! | TAGATAATTTTCTATGCACT+CGG | + | chr8.1:30246130-30246149 | MS.gene76397:intron | 25.0% |
!! | TTGATTTTTATACATATGGC+AGG | + | chr8.1:30247277-30247296 | MS.gene76397:intron | 25.0% |
!! | TTTGGTATTAGTTTGGATAA+AGG | - | chr8.1:30243427-30243446 | None:intergenic | 25.0% |
!!! | AATTGTTTTGTATGAGCATT+TGG | - | chr8.1:30244615-30244634 | None:intergenic | 25.0% |
!!! | AGTCTTGTTTTTGAGTATAA+AGG | - | chr8.1:30247406-30247425 | None:intergenic | 25.0% |
!!! | CAATTTCAAGTGATTTTGAT+GGG | - | chr8.1:30244040-30244059 | None:intergenic | 25.0% |
!!! | CCTAATTTTCAGTTTTGATA+TGG | + | chr8.1:30244321-30244340 | MS.gene76397:intron | 25.0% |
!!! | GAAGCAAAAAGCATTAAAAA+TGG | - | chr8.1:30243699-30243718 | None:intergenic | 25.0% |
!!! | TACTAAAGAGTGTTAAAACA+TGG | + | chr8.1:30246279-30246298 | MS.gene76397:intron | 25.0% |
AAAAATGGAATATCAAAGCC+GGG | + | chr8.1:30246337-30246356 | MS.gene76397:CDS | 30.0% | |
AAAACTTCAAAGACATTGGA+TGG | + | chr8.1:30241682-30241701 | MS.gene76397:CDS | 30.0% | |
AAGCATTAAAAATGGAATCC+AGG | - | chr8.1:30243691-30243710 | None:intergenic | 30.0% | |
AATGTTACGAATTGGTTACT+AGG | + | chr8.1:30245443-30245462 | MS.gene76397:intron | 30.0% | |
AGAGATTCTCTCAAAAATCT+TGG | + | chr8.1:30245578-30245597 | MS.gene76397:intron | 30.0% | |
AGCAAAAACTTCAAAGACAT+TGG | + | chr8.1:30241678-30241697 | MS.gene76397:CDS | 30.0% | |
AGCATTAAAAATGGAATCCA+GGG | - | chr8.1:30243690-30243709 | None:intergenic | 30.0% | |
AGTAACCAATTCGTAACATT+TGG | - | chr8.1:30245443-30245462 | None:intergenic | 30.0% | |
AGTCCATATATGTCATTGAA+TGG | - | chr8.1:30242411-30242430 | None:intergenic | 30.0% | |
AGTGGTTACGAATATGATAA+TGG | + | chr8.1:30242725-30242744 | MS.gene76397:CDS | 30.0% | |
AGTTTCAACATCAACAAATG+TGG | + | chr8.1:30241723-30241742 | MS.gene76397:CDS | 30.0% | |
ATGCTTAACTTATGCATTGT+GGG | + | chr8.1:30244074-30244093 | MS.gene76397:intron | 30.0% | |
ATTACCTGCTTCAATGAAAT+AGG | - | chr8.1:30246622-30246641 | None:intergenic | 30.0% | |
ATTATAGTAACATTTGCCTG+AGG | - | chr8.1:30243636-30243655 | None:intergenic | 30.0% | |
ATTCTCTCAAAAATCTTGGT+GGG | + | chr8.1:30245582-30245601 | MS.gene76397:intron | 30.0% | |
ATTTCCTATTTCATTGAAGC+AGG | + | chr8.1:30246615-30246634 | MS.gene76397:intron | 30.0% | |
CACCCATTATACATTGTTAA+AGG | + | chr8.1:30243761-30243780 | MS.gene76397:intron | 30.0% | |
CATATGAATGCGTGAATATT+AGG | - | chr8.1:30243334-30243353 | None:intergenic | 30.0% | |
CCAGGATTTATTTGAACAAT+AGG | + | chr8.1:30241821-30241840 | MS.gene76397:CDS | 30.0% | |
CCTATTGTTCAAATAAATCC+TGG | - | chr8.1:30241824-30241843 | None:intergenic | 30.0% | |
GAAATCAAGGGGATTAAAAA+TGG | + | chr8.1:30246322-30246341 | MS.gene76397:CDS | 30.0% | |
GGAATTATGGTTATTACTTC+GGG | + | chr8.1:30245484-30245503 | MS.gene76397:intron | 30.0% | |
GTAGATAAGAAACATAATCC+GGG | - | chr8.1:30243742-30243761 | None:intergenic | 30.0% | |
GTATCATCTAGACTTGAAAA+CGG | + | chr8.1:30242005-30242024 | MS.gene76397:CDS | 30.0% | |
GTGGTTACGAATATGATAAT+GGG | + | chr8.1:30242726-30242745 | MS.gene76397:CDS | 30.0% | |
TAAAAAAAATGGTTCCTTCC+CGG | + | chr8.1:30243721-30243740 | MS.gene76397:intron | 30.0% | |
TAAATTATTCACCCACTTTC+TGG | + | chr8.1:30246641-30246660 | MS.gene76397:intron | 30.0% | |
TACATTGCATCAAATACATC+AGG | - | chr8.1:30246793-30246812 | None:intergenic | 30.0% | |
TAGAAATGTTGATCAACTAG+TGG | - | chr8.1:30245101-30245120 | None:intergenic | 30.0% | |
TAGCAGCATAAGCAAATTAA+TGG | - | chr8.1:30243029-30243048 | None:intergenic | 30.0% | |
TATCATCTAGACTTGAAAAC+GGG | + | chr8.1:30242006-30242025 | MS.gene76397:CDS | 30.0% | |
TATGCTTAACTTATGCATTG+TGG | + | chr8.1:30244073-30244092 | MS.gene76397:intron | 30.0% | |
TCAAATGAGAGTAAGAAAGA+TGG | + | chr8.1:30243131-30243150 | MS.gene76397:CDS | 30.0% | |
TCAAATTGTGAGGATTATAC+GGG | - | chr8.1:30247261-30247280 | None:intergenic | 30.0% | |
TCTCCATTCAATGACATATA+TGG | + | chr8.1:30242405-30242424 | MS.gene76397:CDS | 30.0% | |
TTCAATGACATATATGGACT+TGG | + | chr8.1:30242411-30242430 | MS.gene76397:CDS | 30.0% | |
! | AGATAATTTTCTATGCACTC+GGG | + | chr8.1:30246131-30246150 | MS.gene76397:intron | 30.0% |
! | ATATGGCAGGTCAAATTTTT+GGG | + | chr8.1:30247290-30247309 | MS.gene76397:intron | 30.0% |
! | TGGTTACGAATATGATAATG+GGG | + | chr8.1:30242727-30242746 | MS.gene76397:CDS | 30.0% |
!! | ACTTCACCTTTAAAATCCAA+AGG | - | chr8.1:30242845-30242864 | None:intergenic | 30.0% |
!! | CTTCACCTTTAAAATCCAAA+GGG | - | chr8.1:30242844-30242863 | None:intergenic | 30.0% |
!! | GAATATTGTTGACTTGGTTA+AGG | + | chr8.1:30241906-30241925 | MS.gene76397:CDS | 30.0% |
!! | GCAATTTCAAGTGATTTTGA+TGG | - | chr8.1:30244041-30244060 | None:intergenic | 30.0% |
!! | TTCACCTTTAAAATCCAAAG+GGG | - | chr8.1:30242843-30242862 | None:intergenic | 30.0% |
!!! | ATCTCAACAATTTTGGTTTG+TGG | + | chr8.1:30243606-30243625 | MS.gene76397:intron | 30.0% |
!!! | GGAAGGAACCATTTTTTTTA+TGG | - | chr8.1:30243721-30243740 | None:intergenic | 30.0% |
!!! | TCTCAACAATTTTGGTTTGT+GGG | + | chr8.1:30243607-30243626 | MS.gene76397:intron | 30.0% |
!!! | TGCTTTTTTCCTGAAGTTTT+TGG | + | chr8.1:30242069-30242088 | MS.gene76397:CDS | 30.0% |
!!! | TTAAGCAGTTTGTTTTGGTT+TGG | + | chr8.1:30247038-30247057 | MS.gene76397:intron | 30.0% |
!!! | TTTTTTCCTGAAGTTTTTGG+TGG | + | chr8.1:30242072-30242091 | MS.gene76397:CDS | 30.0% |
AAATTGTGAGGATTATACGG+GGG | - | chr8.1:30247259-30247278 | None:intergenic | 35.0% | |
AACTCTTTATCTATGGTGTG+AGG | + | chr8.1:30245132-30245151 | MS.gene76397:intron | 35.0% | |
AAGAGTGAGACTTTCAAATG+AGG | + | chr8.1:30244199-30244218 | MS.gene76397:intron | 35.0% | |
AATGTGATCATTCCACATTG+CGG | - | chr8.1:30246598-30246617 | None:intergenic | 35.0% | |
AATTGGACGAAGATTCTGTA+CGG | + | chr8.1:30242154-30242173 | MS.gene76397:CDS | 35.0% | |
ACAGAAATACTCCTTGCATT+AGG | + | chr8.1:30245790-30245809 | MS.gene76397:intron | 35.0% | |
ACCAAGTCAACAATATTCTC+TGG | - | chr8.1:30241904-30241923 | None:intergenic | 35.0% | |
ACCGTCAAAATCTCATAAAC+GGG | - | chr8.1:30244421-30244440 | None:intergenic | 35.0% | |
AGAGGAACTGTCAAAAATGA+CGG | + | chr8.1:30242356-30242375 | MS.gene76397:CDS | 35.0% | |
AGTGATCAACATTGTTCAAG+TGG | + | chr8.1:30242707-30242726 | MS.gene76397:CDS | 35.0% | |
ATAAGAAACATAATCCGGGA+AGG | - | chr8.1:30243738-30243757 | None:intergenic | 35.0% | |
ATGTCCAAAAGCAATTCATG+TGG | - | chr8.1:30246460-30246479 | None:intergenic | 35.0% | |
ATGTGATATTGTTTGCTCCT+AGG | + | chr8.1:30244266-30244285 | MS.gene76397:intron | 35.0% | |
ATTTCTTGTCATTCCGATTG+TGG | + | chr8.1:30246963-30246982 | MS.gene76397:intron | 35.0% | |
CAAATTGTGAGGATTATACG+GGG | - | chr8.1:30247260-30247279 | None:intergenic | 35.0% | |
CATGAGGGAAAAGACTAATT+TGG | - | chr8.1:30246673-30246692 | None:intergenic | 35.0% | |
CATTAAAAATGGAATCCAGG+GGG | - | chr8.1:30243688-30243707 | None:intergenic | 35.0% | |
CCAATTGAACCTATTCAACA+GGG | + | chr8.1:30246418-30246437 | MS.gene76397:CDS | 35.0% | |
CTCTTAATAAAGCAAAGCCA+TGG | - | chr8.1:30246750-30246769 | None:intergenic | 35.0% | |
CTGATCTCACAAAAGGAATT+CGG | + | chr8.1:30242292-30242311 | MS.gene76397:CDS | 35.0% | |
GAATTGGTTACTAGGTTATG+TGG | + | chr8.1:30245451-30245470 | MS.gene76397:intron | 35.0% | |
GACCGTCAAAATCTCATAAA+CGG | - | chr8.1:30244422-30244441 | None:intergenic | 35.0% | |
GAGTTGAGAAAAATCATCTC+CGG | - | chr8.1:30247150-30247169 | None:intergenic | 35.0% | |
GATCGTTAATGTCACAAAGA+AGG | - | chr8.1:30244737-30244756 | None:intergenic | 35.0% | |
GATTCTCTCAAAAATCTTGG+TGG | + | chr8.1:30245581-30245600 | MS.gene76397:intron | 35.0% | |
GCATTAAAAATGGAATCCAG+GGG | - | chr8.1:30243689-30243708 | None:intergenic | 35.0% | |
GCTCATACAAAACAATTCCT+AGG | + | chr8.1:30244618-30244637 | MS.gene76397:intron | 35.0% | |
GCTTACACTGAATCTATAGA+TGG | + | chr8.1:30242129-30242148 | MS.gene76397:CDS | 35.0% | |
GTTAGTAAACCATATGACTC+TGG | + | chr8.1:30241775-30241794 | MS.gene76397:CDS | 35.0% | |
TAAAGGTCTCAAATGAGACT+TGG | - | chr8.1:30247389-30247408 | None:intergenic | 35.0% | |
TAATTATCGTTGAAGCGTGA+AGG | + | chr8.1:30242931-30242950 | MS.gene76397:intron | 35.0% | |
TACTATAATCCCTGCTAACA+CGG | + | chr8.1:30243647-30243666 | MS.gene76397:intron | 35.0% | |
TATGAGATCGATCAACTACA+AGG | - | chr8.1:30247509-30247528 | None:intergenic | 35.0% | |
TCCAATTGAACCTATTCAAC+AGG | + | chr8.1:30246417-30246436 | MS.gene76397:CDS | 35.0% | |
TGAAGCTGACAACAAATTCA+GGG | - | chr8.1:30242817-30242836 | None:intergenic | 35.0% | |
TGATCTCACAAAAGGAATTC+GGG | + | chr8.1:30242293-30242312 | MS.gene76397:CDS | 35.0% | |
TTAATCATGGCCCAAGTTAT+AGG | - | chr8.1:30244454-30244473 | None:intergenic | 35.0% | |
TTGAAGAGAGTGAGAGATAT+TGG | + | chr8.1:30246491-30246510 | MS.gene76397:CDS | 35.0% | |
TTGAAGCTGACAACAAATTC+AGG | - | chr8.1:30242818-30242837 | None:intergenic | 35.0% | |
TTTCCCATGATGATTTCAAG+CGG | + | chr8.1:30243871-30243890 | MS.gene76397:CDS | 35.0% | |
TTTCTCCTGCATTGCAAAAT+TGG | + | chr8.1:30247532-30247551 | MS.gene76397:CDS | 35.0% | |
! | AAACATGGCATTGAAAAGCA+TGG | + | chr8.1:30246294-30246313 | MS.gene76397:intron | 35.0% |
! | AAGCAAATGAGATTGGTTGA+AGG | + | chr8.1:30241751-30241770 | MS.gene76397:CDS | 35.0% |
! | ACCCGTTTATGAGATTTTGA+CGG | + | chr8.1:30244417-30244436 | MS.gene76397:intron | 35.0% |
! | ACCTACTTGCTCTAAACTTA+AGG | + | chr8.1:30246926-30246945 | MS.gene76397:intron | 35.0% |
! | ATTTGGATTAGACCAGAAAG+TGG | - | chr8.1:30246656-30246675 | None:intergenic | 35.0% |
! | CAATGTCTTTGAAAAAGGGA+TGG | - | chr8.1:30246838-30246857 | None:intergenic | 35.0% |
! | CATATGGCAGGTCAAATTTT+TGG | + | chr8.1:30247289-30247308 | MS.gene76397:intron | 35.0% |
! | CATGGCTTTGCTTTATTAAG+AGG | + | chr8.1:30246748-30246767 | MS.gene76397:CDS | 35.0% |
! | CTGTCAAAAATGACGGAATA+TGG | + | chr8.1:30242363-30242382 | MS.gene76397:CDS | 35.0% |
! | GTTTTATGCCGTGTCATAAT+GGG | + | chr8.1:30242659-30242678 | MS.gene76397:CDS | 35.0% |
! | TATGGCAGGTCAAATTTTTG+GGG | + | chr8.1:30247291-30247310 | MS.gene76397:intron | 35.0% |
! | TCACAGTTTCCACTCTAAAA+CGG | - | chr8.1:30247476-30247495 | None:intergenic | 35.0% |
! | TCCAGAGAATATTGTTGACT+TGG | + | chr8.1:30241900-30241919 | MS.gene76397:CDS | 35.0% |
! | TCCTTAAGTTTAGAGCAAGT+AGG | - | chr8.1:30246930-30246949 | None:intergenic | 35.0% |
! | TCTACCACATGAATTGCTTT+TGG | + | chr8.1:30246453-30246472 | MS.gene76397:CDS | 35.0% |
! | TTGTAAACTGCGGTATGTTT+TGG | + | chr8.1:30247191-30247210 | MS.gene76397:intron | 35.0% |
! | TTTGGATTAGACCAGAAAGT+GGG | - | chr8.1:30246655-30246674 | None:intergenic | 35.0% |
! | TTTTATGCCGTGTCATAATG+GGG | + | chr8.1:30242660-30242679 | MS.gene76397:CDS | 35.0% |
!! | AAGAAACTCATTTTAGAGGC+TGG | - | chr8.1:30246070-30246089 | None:intergenic | 35.0% |
!! | AGTCTTGATGATCTCTTTTG+TGG | - | chr8.1:30246572-30246591 | None:intergenic | 35.0% |
!! | CGCATTTAAGCAGTTTGTTT+TGG | + | chr8.1:30247033-30247052 | MS.gene76397:intron | 35.0% |
!! | GTGCAGAATTTCAGTTTTGT+AGG | + | chr8.1:30245715-30245734 | MS.gene76397:intron | 35.0% |
!! | TCTTGGTATTTCTAGCTTCT+TGG | + | chr8.1:30241798-30241817 | MS.gene76397:CDS | 35.0% |
!! | TGAATTTGTTGTCAGCTTCA+AGG | + | chr8.1:30242817-30242836 | MS.gene76397:CDS | 35.0% |
!! | TTACGAATATGATAATGGGG+TGG | + | chr8.1:30242730-30242749 | MS.gene76397:CDS | 35.0% |
!! | TTGGTTTGGTTGTAATTGCA+TGG | + | chr8.1:30247052-30247071 | MS.gene76397:intron | 35.0% |
!!! | AAGTTTTTGGTGGAGCTATT+AGG | + | chr8.1:30242082-30242101 | MS.gene76397:CDS | 35.0% |
AAACCATATGACTCTGGTCT+TGG | + | chr8.1:30241781-30241800 | MS.gene76397:CDS | 40.0% | |
AACCTATTCAACAGGGACAA+TGG | + | chr8.1:30246425-30246444 | MS.gene76397:CDS | 40.0% | |
AACTTCGTCATATCCTTGAC+CGG | + | chr8.1:30247128-30247147 | MS.gene76397:intron | 40.0% | |
AAGCAAGCTGATCTCACAAA+AGG | + | chr8.1:30242285-30242304 | MS.gene76397:CDS | 40.0% | |
AATGTGGAGGTAGAGTTAGA+TGG | + | chr8.1:30241952-30241971 | MS.gene76397:CDS | 40.0% | |
AATTGGCCAATCTTGCATGT+AGG | + | chr8.1:30247549-30247568 | MS.gene76397:CDS | 40.0% | |
ACCTATTCAACAGGGACAAT+GGG | + | chr8.1:30246426-30246445 | MS.gene76397:CDS | 40.0% | |
ACTATAATCCCTGCTAACAC+GGG | + | chr8.1:30243648-30243667 | MS.gene76397:intron | 40.0% | |
ACTTCCGCTTGAAATCATCA+TGG | - | chr8.1:30243878-30243897 | None:intergenic | 40.0% | |
AGAAAAATCATCTCCGGTCA+AGG | - | chr8.1:30247144-30247163 | None:intergenic | 40.0% | |
AGCGCACATTTAGTCAAAAC+AGG | + | chr8.1:30245386-30245405 | MS.gene76397:intron | 40.0% | |
AGTGAGACTTTCAAATGAGG+AGG | + | chr8.1:30244202-30244221 | MS.gene76397:intron | 40.0% | |
ATACCAAGACCAGAGTCATA+TGG | - | chr8.1:30241787-30241806 | None:intergenic | 40.0% | |
ATAGCTCCACCAAAAACTTC+AGG | - | chr8.1:30242081-30242100 | None:intergenic | 40.0% | |
ATATGGGATGAGCAACACAA+TGG | + | chr8.1:30247429-30247448 | MS.gene76397:CDS | 40.0% | |
ATCTCACAAAAGGAATTCGG+GGG | + | chr8.1:30242295-30242314 | MS.gene76397:CDS | 40.0% | |
ATGATTTCAAGCGGAAGTTG+AGG | + | chr8.1:30243880-30243899 | MS.gene76397:CDS | 40.0% | |
ATTGGACGAAGATTCTGTAC+GGG | + | chr8.1:30242155-30242174 | MS.gene76397:CDS | 40.0% | |
CAGAGCCAAATGTTACGAAT+TGG | + | chr8.1:30245435-30245454 | MS.gene76397:intron | 40.0% | |
CCCTGTTGAATAGGTTCAAT+TGG | - | chr8.1:30246421-30246440 | None:intergenic | 40.0% | |
CGAAGGTGAACCTATAACTT+GGG | + | chr8.1:30244441-30244460 | MS.gene76397:intron | 40.0% | |
CTTACAGGAATGACTGCTTT+GGG | + | chr8.1:30242186-30242205 | MS.gene76397:CDS | 40.0% | |
CTTCATGTGTATGAATAGCC+TGG | + | chr8.1:30246711-30246730 | MS.gene76397:intron | 40.0% | |
CTTCCGCTTGAAATCATCAT+GGG | - | chr8.1:30243877-30243896 | None:intergenic | 40.0% | |
CTTCGGTATGTAAATCATGG+AGG | + | chr8.1:30246542-30246561 | MS.gene76397:CDS | 40.0% | |
GAACAATGTTGATCACTACC+TGG | - | chr8.1:30242704-30242723 | None:intergenic | 40.0% | |
GATCTCACAAAAGGAATTCG+GGG | + | chr8.1:30242294-30242313 | MS.gene76397:CDS | 40.0% | |
GGTTGTCAAGCAAATGAGAT+TGG | + | chr8.1:30241744-30241763 | MS.gene76397:CDS | 40.0% | |
GTGCTTCGGTATGTAAATCA+TGG | + | chr8.1:30246539-30246558 | MS.gene76397:CDS | 40.0% | |
GTTGATATTTACCGCAACTC+AGG | + | chr8.1:30242228-30242247 | MS.gene76397:CDS | 40.0% | |
TAGGATAGAAATGTGTGCAC+TGG | - | chr8.1:30243485-30243504 | None:intergenic | 40.0% | |
TCGAAGGTGAACCTATAACT+TGG | + | chr8.1:30244440-30244459 | MS.gene76397:intron | 40.0% | |
TCTTACAGGAATGACTGCTT+TGG | + | chr8.1:30242185-30242204 | MS.gene76397:CDS | 40.0% | |
TGCTGAGAATGAACCACAAT+CGG | - | chr8.1:30246979-30246998 | None:intergenic | 40.0% | |
TGCTTTCCTACATGCAAGAT+TGG | - | chr8.1:30247558-30247577 | None:intergenic | 40.0% | |
TTAACCGCTTCACTCTTGTT+TGG | + | chr8.1:30242999-30243018 | MS.gene76397:intron | 40.0% | |
TTGGTTGTAATTGCATGGCA+GGG | + | chr8.1:30247057-30247076 | MS.gene76397:intron | 40.0% | |
TTGTATCTCGAAATGCTCCT+AGG | - | chr8.1:30244638-30244657 | None:intergenic | 40.0% | |
TTTGCCAAACAAGAGTGAAG+CGG | - | chr8.1:30243006-30243025 | None:intergenic | 40.0% | |
TTTGGTTGTAATTGCATGGC+AGG | + | chr8.1:30247056-30247075 | MS.gene76397:intron | 40.0% | |
! | AAGGCCCCTTTGGATTTTAA+AGG | + | chr8.1:30242836-30242855 | MS.gene76397:CDS | 40.0% |
! | AGTTGTTATTAGCCGCGAAA+AGG | + | chr8.1:30247093-30247112 | MS.gene76397:intron | 40.0% |
! | ATGGCATTGAAAAGCATGGT+CGG | + | chr8.1:30246298-30246317 | MS.gene76397:intron | 40.0% |
! | ATTGGCCAATTTTGCAATGC+AGG | - | chr8.1:30247540-30247559 | None:intergenic | 40.0% |
! | CCATTTTCCCCATTATGACA+CGG | - | chr8.1:30242670-30242689 | None:intergenic | 40.0% |
! | CGCTAACATAGTTTGAAGCA+TGG | + | chr8.1:30244812-30244831 | MS.gene76397:intron | 40.0% |
! | CGGAAGTTGAGGTTGATTAT+TGG | + | chr8.1:30243891-30243910 | MS.gene76397:intron | 40.0% |
! | GCTTGATTCGTGGCATATAA+TGG | + | chr8.1:30247646-30247665 | MS.gene76397:CDS | 40.0% |
! | GCTTTTGGACATAATCCGAA+GGG | + | chr8.1:30246468-30246487 | MS.gene76397:CDS | 40.0% |
! | GTTTTCAACAACCCATTGCT+TGG | + | chr8.1:30242028-30242047 | MS.gene76397:CDS | 40.0% |
! | TGCTTTTGGACATAATCCGA+AGG | + | chr8.1:30246467-30246486 | MS.gene76397:CDS | 40.0% |
! | TGGCACTGAAAGTGGAATTA+TGG | + | chr8.1:30245471-30245490 | MS.gene76397:intron | 40.0% |
!! | GGTTTTATGCCGTGTCATAA+TGG | + | chr8.1:30242658-30242677 | MS.gene76397:CDS | 40.0% |
!! | TATGAGATTTTGACGGTCGA+AGG | + | chr8.1:30244424-30244443 | MS.gene76397:intron | 40.0% |
!! | TTGTGAGATCAGCTTGCTTT+TGG | - | chr8.1:30242284-30242303 | None:intergenic | 40.0% |
!! | TTTGTTTGAGTTGTCCGACA+CGG | + | chr8.1:30245186-30245205 | MS.gene76397:intron | 40.0% |
AAAATGGAGCTTCTTCGTCC+AGG | + | chr8.1:30242683-30242702 | MS.gene76397:CDS | 45.0% | |
AACACTCATATGAGCCGTGT+CGG | - | chr8.1:30245203-30245222 | None:intergenic | 45.0% | |
AAGCATGGTCGGAGAAATCA+AGG | + | chr8.1:30246309-30246328 | MS.gene76397:intron | 45.0% | |
AAGGCTTGTAAGGAAGAGAG+TGG | - | chr8.1:30247618-30247637 | None:intergenic | 45.0% | |
ACGAATCAAGCAGATGGCAA+AGG | - | chr8.1:30247637-30247656 | None:intergenic | 45.0% | |
AGCAAAGCCATGGATAAGCA+CGG | - | chr8.1:30246740-30246759 | None:intergenic | 45.0% | |
AGCATGGTCGGAGAAATCAA+GGG | + | chr8.1:30246310-30246329 | MS.gene76397:intron | 45.0% | |
ATCAAGACTCTTCCGCAATG+TGG | + | chr8.1:30246583-30246602 | MS.gene76397:intron | 45.0% | |
ATTGCTTGGATTGACGAGGA+AGG | + | chr8.1:30242042-30242061 | MS.gene76397:CDS | 45.0% | |
CATGTCAATGCAAACACGAC+TGG | + | chr8.1:30242251-30242270 | MS.gene76397:CDS | 45.0% | |
GAATATGGACTTCGTCGCTA+TGG | + | chr8.1:30242378-30242397 | MS.gene76397:CDS | 45.0% | |
GATGAGCAACACAATGGTTG+GGG | + | chr8.1:30247435-30247454 | MS.gene76397:CDS | 45.0% | |
GGATGAGCAACACAATGGTT+GGG | + | chr8.1:30247434-30247453 | MS.gene76397:CDS | 45.0% | |
GGTAGAGTTAGATGGTCAAG+AGG | + | chr8.1:30241960-30241979 | MS.gene76397:CDS | 45.0% | |
GGTCAAGGATATGACGAAGT+TGG | - | chr8.1:30247129-30247148 | None:intergenic | 45.0% | |
GTACGGGAGATGTTTCTTAC+AGG | + | chr8.1:30242171-30242190 | MS.gene76397:CDS | 45.0% | |
GTCAAACTCACATCTTGCTC+TGG | + | chr8.1:30246387-30246406 | MS.gene76397:CDS | 45.0% | |
TAGCCGCGAAAAGGATATGA+CGG | + | chr8.1:30247102-30247121 | MS.gene76397:intron | 45.0% | |
TATGAAGCACGAACACCTCT+AGG | - | chr8.1:30245367-30245386 | None:intergenic | 45.0% | |
TATGCCACGAATCAAGCAGA+TGG | - | chr8.1:30247643-30247662 | None:intergenic | 45.0% | |
TCCTCGTCAATCCAAGCAAT+GGG | - | chr8.1:30242042-30242061 | None:intergenic | 45.0% | |
TCTCACAAAAGGAATTCGGG+GGG | + | chr8.1:30242296-30242315 | MS.gene76397:CDS | 45.0% | |
TCTCACTCTCTTCAACCCTT+CGG | - | chr8.1:30246486-30246505 | None:intergenic | 45.0% | |
TGGTGTTCATCTTGCAACTG+TGG | + | chr8.1:30242431-30242450 | MS.gene76397:CDS | 45.0% | |
TTCCAAACCACATAGTGCTC+TGG | - | chr8.1:30242770-30242789 | None:intergenic | 45.0% | |
TTCCTCGTCAATCCAAGCAA+TGG | - | chr8.1:30242043-30242062 | None:intergenic | 45.0% | |
TTGCTTGGATTGACGAGGAA+GGG | + | chr8.1:30242043-30242062 | MS.gene76397:CDS | 45.0% | |
! | AGGTTATGTGGCACTGAAAG+TGG | + | chr8.1:30245463-30245482 | MS.gene76397:intron | 45.0% |
! | ATTTTCTATGCACTCGGGCT+AGG | + | chr8.1:30246136-30246155 | MS.gene76397:intron | 45.0% |
! | CCGTGTCATAATGGGGAAAA+TGG | + | chr8.1:30242667-30242686 | MS.gene76397:CDS | 45.0% |
! | TACGGATGTCATAGGAGTGT+CGG | + | chr8.1:30245305-30245324 | MS.gene76397:intron | 45.0% |
! | TGCTGTCGTCTTTTGTGCTT+CGG | + | chr8.1:30246525-30246544 | MS.gene76397:CDS | 45.0% |
! | TTTGCCATCTGCTTGATTCG+TGG | + | chr8.1:30247636-30247655 | MS.gene76397:CDS | 45.0% |
! | TTTTTGCAGACACAACCACG+TGG | + | chr8.1:30244150-30244169 | MS.gene76397:intron | 45.0% |
!! | GTATTTCTAGCTTCTTGGCC+AGG | + | chr8.1:30241803-30241822 | MS.gene76397:CDS | 45.0% |
!! | GTGGCTTGCTTGTTCTAAAG+AGG | + | chr8.1:30242338-30242357 | MS.gene76397:CDS | 45.0% |
!! | TGGCTCTGAGCATTCTACAA+TGG | + | chr8.1:30243151-30243170 | MS.gene76397:CDS | 45.0% |
!! | TTTGGTTTGTGGGATACCTC+AGG | + | chr8.1:30243617-30243636 | MS.gene76397:intron | 45.0% |
!! | ATAAATTAACATATATTTAA+CGG | - | chr8.1:30244910-30244929 | None:intergenic | 5.0% |
!! | GATATAAAAAAAATATATTA+GGG | - | chr8.1:30243312-30243331 | None:intergenic | 5.0% |
!! | TTAAAAAAAATGTTAAAATT+TGG | - | chr8.1:30243445-30243464 | None:intergenic | 5.0% |
AAATTCTCGCTCTCAGCACC+CGG | - | chr8.1:30246358-30246377 | None:intergenic | 50.0% | |
AAGCCAATGTTCGCTATGCG+TGG | + | chr8.1:30242319-30242338 | MS.gene76397:CDS | 50.0% | |
AAGCCACGCATAGCGAACAT+TGG | - | chr8.1:30242325-30242344 | None:intergenic | 50.0% | |
AATGAGACTTGGCTCAGTGC+TGG | - | chr8.1:30247378-30247397 | None:intergenic | 50.0% | |
ACCCATTGCTTGGATTGACG+AGG | + | chr8.1:30242038-30242057 | MS.gene76397:CDS | 50.0% | |
ACGTGTCGTACGGATGTCAT+AGG | + | chr8.1:30245297-30245316 | MS.gene76397:intron | 50.0% | |
CAAAGCCATGGATAAGCACG+GGG | - | chr8.1:30246738-30246757 | None:intergenic | 50.0% | |
CACAGACACCTGACACAACA+CGG | + | chr8.1:30244842-30244861 | MS.gene76397:intron | 50.0% | |
GAGATCTTCCCGTGTTAGCA+GGG | - | chr8.1:30243659-30243678 | None:intergenic | 50.0% | |
GATGGAACTGCACATCTGAG+TGG | + | chr8.1:30241700-30241719 | MS.gene76397:CDS | 50.0% | |
GCAAAGCCATGGATAAGCAC+GGG | - | chr8.1:30246739-30246758 | None:intergenic | 50.0% | |
GCAGATGGCAAAGGCTTGTA+AGG | - | chr8.1:30247628-30247647 | None:intergenic | 50.0% | |
GCATGGTCGGAGAAATCAAG+GGG | + | chr8.1:30246311-30246330 | MS.gene76397:intron | 50.0% | |
GCCCATTGTCCCTGTTGAAT+AGG | - | chr8.1:30246430-30246449 | None:intergenic | 50.0% | |
GGGATGAGCAACACAATGGT+TGG | + | chr8.1:30247433-30247452 | MS.gene76397:CDS | 50.0% | |
GTTGTGTCAGGTGTCTGTGT+CGG | - | chr8.1:30244841-30244860 | None:intergenic | 50.0% | |
TGTCGGACACTGACACATGT+TGG | + | chr8.1:30245322-30245341 | MS.gene76397:intron | 50.0% | |
! | GACCAGAGCACTATGTGGTT+TGG | + | chr8.1:30242765-30242784 | MS.gene76397:CDS | 50.0% |
! | GCATTGACATGCCTGAGTTG+CGG | - | chr8.1:30242242-30242261 | None:intergenic | 50.0% |
! | GGACCGTCATATCCTTTTCG+CGG | - | chr8.1:30247108-30247127 | None:intergenic | 50.0% |
! | TCACAGACCAGAGCACTATG+TGG | + | chr8.1:30242760-30242779 | MS.gene76397:CDS | 50.0% |
!!! | CTTCATGGGCCGTTTTAGAG+TGG | + | chr8.1:30247464-30247483 | MS.gene76397:CDS | 50.0% |
AATGGAATCCAGGGGGACCT+CGG | - | chr8.1:30243681-30243700 | None:intergenic | 55.0% | |
ACACGACACGTATCCGACAC+TGG | - | chr8.1:30245822-30245841 | None:intergenic | 55.0% | |
ACTGGTGCACGCCTAATGCA+AGG | - | chr8.1:30245804-30245823 | None:intergenic | 55.0% | |
CATTAGGCGTGCACCAGTGT+CGG | + | chr8.1:30245806-30245825 | MS.gene76397:intron | 55.0% | |
CGACGTATCCGTGTTGTGTC+AGG | - | chr8.1:30244853-30244872 | None:intergenic | 55.0% | |
CTAACACGGGAAGATCTCCG+AGG | + | chr8.1:30243661-30243680 | MS.gene76397:intron | 55.0% | |
CTGTGGCTCGTCCTTATGCA+TGG | + | chr8.1:30242448-30242467 | MS.gene76397:CDS | 55.0% | |
GAGCTGTTTGATCCTCCACG+TGG | - | chr8.1:30244168-30244187 | None:intergenic | 55.0% | |
GGAGATCTTCCCGTGTTAGC+AGG | - | chr8.1:30243660-30243679 | None:intergenic | 55.0% | |
TGTCAGCTTCAAGGCCCCTT+TGG | + | chr8.1:30242826-30242845 | MS.gene76397:CDS | 55.0% | |
TTGCAGACACAACCACGTGG+AGG | + | chr8.1:30244153-30244172 | MS.gene76397:intron | 55.0% | |
!! | ACTTGGCTCAGTGCTGGTGA+AGG | - | chr8.1:30247372-30247391 | None:intergenic | 55.0% |
!! | CTCTAGGACTAGGTGTGTCG+CGG | - | chr8.1:30245351-30245370 | None:intergenic | 55.0% |
!! | GCACGAACACCTCTAGGACT+AGG | - | chr8.1:30245361-30245380 | None:intergenic | 55.0% |
!! | GGTTGGGGTGCTGACTTCAT+GGG | + | chr8.1:30247450-30247469 | MS.gene76397:CDS | 55.0% |
!! | TGGTTGGGGTGCTGACTTCA+TGG | + | chr8.1:30247449-30247468 | MS.gene76397:CDS | 55.0% |
AAGACGACAGCAGAACGCGC+AGG | - | chr8.1:30246517-30246536 | None:intergenic | 60.0% | |
CATGGATAAGCACGGGGACC+AGG | - | chr8.1:30246732-30246751 | None:intergenic | 60.0% | |
CCGTACGACACGTGTCGAAC+CGG | - | chr8.1:30245290-30245309 | None:intergenic | 60.0% | |
CGCGACACACCTAGTCCTAG+AGG | + | chr8.1:30245349-30245368 | MS.gene76397:intron | 60.0% | |
CTGGTCCCCGTGCTTATCCA+TGG | + | chr8.1:30246730-30246749 | MS.gene76397:CDS | 60.0% | |
! | CCGGTTCGACACGTGTCGTA+CGG | + | chr8.1:30245287-30245306 | MS.gene76397:intron | 60.0% |
GAAGATCTCCGAGGTCCCCC+TGG | + | chr8.1:30243670-30243689 | MS.gene76397:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 30241673 | 30247665 | 30241673 | ID=MS.gene76397 |
chr8.1 | mRNA | 30241673 | 30247665 | 30241673 | ID=MS.gene76397.t1;Parent=MS.gene76397 |
chr8.1 | exon | 30241673 | 30242469 | 30241673 | ID=MS.gene76397.t1.exon1;Parent=MS.gene76397.t1 |
chr8.1 | CDS | 30241673 | 30242469 | 30241673 | ID=cds.MS.gene76397.t1;Parent=MS.gene76397.t1 |
chr8.1 | exon | 30242616 | 30242857 | 30242616 | ID=MS.gene76397.t1.exon2;Parent=MS.gene76397.t1 |
chr8.1 | CDS | 30242616 | 30242857 | 30242616 | ID=cds.MS.gene76397.t1;Parent=MS.gene76397.t1 |
chr8.1 | exon | 30243120 | 30243178 | 30243120 | ID=MS.gene76397.t1.exon3;Parent=MS.gene76397.t1 |
chr8.1 | CDS | 30243120 | 30243178 | 30243120 | ID=cds.MS.gene76397.t1;Parent=MS.gene76397.t1 |
chr8.1 | exon | 30243861 | 30243901 | 30243861 | ID=MS.gene76397.t1.exon4;Parent=MS.gene76397.t1 |
chr8.1 | CDS | 30243861 | 30243901 | 30243861 | ID=cds.MS.gene76397.t1;Parent=MS.gene76397.t1 |
chr8.1 | exon | 30246312 | 30246563 | 30246312 | ID=MS.gene76397.t1.exon5;Parent=MS.gene76397.t1 |
chr8.1 | CDS | 30246312 | 30246563 | 30246312 | ID=cds.MS.gene76397.t1;Parent=MS.gene76397.t1 |
chr8.1 | exon | 30246729 | 30246809 | 30246729 | ID=MS.gene76397.t1.exon6;Parent=MS.gene76397.t1 |
chr8.1 | CDS | 30246729 | 30246809 | 30246729 | ID=cds.MS.gene76397.t1;Parent=MS.gene76397.t1 |
chr8.1 | exon | 30247299 | 30247665 | 30247299 | ID=MS.gene76397.t1.exon7;Parent=MS.gene76397.t1 |
chr8.1 | CDS | 30247299 | 30247665 | 30247299 | ID=cds.MS.gene76397.t1;Parent=MS.gene76397.t1 |
Gene Sequence |
Protein sequence |