AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76542

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76542.t1 MTR_2g100930 94.915 354 10 2 1 347 1 353 0.0 688
MS.gene76542.t1 MTR_4g100630 53.009 349 128 14 1 336 1 326 3.36e-100 299
MS.gene76542.t1 MTR_6g092540 55.233 172 63 4 1 168 1 162 2.86e-50 169
MS.gene76542.t1 MTR_5g037080 50.000 204 58 7 1 183 3 183 2.37e-48 165
MS.gene76542.t1 MTR_8g101650 50.289 173 72 4 3 168 4 169 2.33e-44 154
MS.gene76542.t1 MTR_4g107230 50.920 163 74 5 22 183 6 163 5.64e-33 124
MS.gene76542.t1 MTR_1g111830 61.538 91 34 1 97 187 118 207 8.02e-33 122
MS.gene76542.t1 MTR_4g111975 74.286 70 18 0 98 167 133 202 2.29e-32 123
MS.gene76542.t1 MTR_3g462790 47.651 149 60 5 98 245 142 273 2.98e-32 123
MS.gene76542.t1 MTR_5g069710 73.239 71 19 0 98 168 127 197 7.85e-32 121
MS.gene76542.t1 MTR_7g067080 74.648 71 18 0 98 168 135 205 4.52e-31 119
MS.gene76542.t1 MTR_5g081860 62.222 90 32 1 98 185 120 209 5.84e-30 115
MS.gene76542.t1 MTR_0036s0260 69.118 68 21 0 103 170 28 95 3.13e-28 109
MS.gene76542.t1 MTR_3g104370 42.529 174 77 5 1 168 3 159 7.21e-28 109
MS.gene76542.t1 MTR_2g090305 67.647 68 22 0 103 170 28 95 7.85e-27 105
MS.gene76542.t1 MTR_8g063600 62.195 82 25 2 88 167 95 172 1.20e-24 102
MS.gene76542.t1 MTR_5g027570 45.161 93 49 1 99 189 88 180 6.20e-21 90.5
MS.gene76542.t1 MTR_5g088010 52.113 71 31 1 99 166 56 126 2.38e-20 89.4
MS.gene76542.t1 MTR_4g015130 65.455 55 19 0 113 167 3 57 6.32e-20 83.6
MS.gene76542.t1 MTR_1g048660 54.688 64 29 0 104 167 13 76 1.07e-19 83.2
MS.gene76542.t1 MTR_5g088060 56.923 65 25 1 105 166 274 338 1.75e-18 86.7
MS.gene76542.t1 MTR_5g488160 56.923 65 25 1 105 166 274 338 1.75e-18 86.7
MS.gene76542.t1 MTR_8g063870 53.846 65 28 1 105 167 94 158 6.10e-18 82.8
MS.gene76542.t1 MTR_5g027550 57.895 57 24 0 99 155 73 129 3.33e-17 80.1
MS.gene76542.t1 MTR_1g033620 48.315 89 38 1 119 207 21 101 7.68e-17 79.3
MS.gene76542.t1 MTR_1g083180 53.846 65 25 2 105 165 63 126 4.84e-14 70.1
MS.gene76542.t1 MTR_5g075760 51.562 64 27 2 105 165 107 169 2.53e-13 68.6
MS.gene76542.t1 MTR_5g075790 50.000 64 28 2 105 165 115 177 7.89e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76542.t1 AT3G16350 54.476 391 130 14 1 347 1 387 2.56e-108 322
MS.gene76542.t1 AT5G47390 48.021 379 137 14 1 338 1 360 7.29e-90 274
MS.gene76542.t1 AT1G70000 54.315 197 62 8 1 186 1 180 1.65e-51 172
MS.gene76542.t1 AT1G70000 54.315 197 62 8 1 186 1 180 1.65e-51 172
MS.gene76542.t1 AT5G61620 39.370 254 116 8 1 247 8 230 6.40e-48 164
MS.gene76542.t1 AT5G56840 51.479 169 69 4 1 168 1 157 2.87e-47 160
MS.gene76542.t1 AT2G38090 65.625 96 33 0 80 175 118 213 4.32e-35 130
MS.gene76542.t1 AT5G58900 74.286 70 18 0 98 167 136 205 3.24e-32 122
MS.gene76542.t1 AT1G49010 74.286 70 18 0 98 167 129 198 8.20e-32 122
MS.gene76542.t1 AT1G74840 48.503 167 75 6 29 192 24 182 5.73e-30 115
MS.gene76542.t1 AT5G08520 70.000 70 21 0 98 167 113 182 6.93e-30 116
MS.gene76542.t1 AT5G04760 65.278 72 25 0 97 168 93 164 1.36e-29 113
MS.gene76542.t1 AT1G74840 48.503 167 75 6 29 192 24 182 1.85e-29 114
MS.gene76542.t1 AT3G11280 71.429 70 20 0 98 167 122 191 1.21e-28 112
MS.gene76542.t1 AT3G11280 71.429 70 20 0 98 167 122 191 1.21e-28 112
MS.gene76542.t1 AT5G01200 70.000 70 21 0 98 167 141 210 1.99e-28 111
MS.gene76542.t1 AT1G19000 46.629 178 66 8 29 191 22 185 4.59e-28 111
MS.gene76542.t1 AT1G19000 46.629 178 66 8 29 191 22 185 4.59e-28 111
MS.gene76542.t1 AT5G05790 46.491 114 55 1 98 211 126 233 5.38e-27 108
MS.gene76542.t1 AT5G05790 46.491 114 55 1 98 211 126 233 5.38e-27 108
MS.gene76542.t1 AT4G09450 51.613 93 45 0 80 172 68 160 3.30e-24 98.6
MS.gene76542.t1 AT3G10580 50.000 96 43 2 73 168 68 158 2.67e-23 97.4
MS.gene76542.t1 AT3G10580 58.667 75 29 1 94 168 86 158 3.82e-23 97.8
MS.gene76542.t1 AT5G23650 53.425 73 34 0 96 168 113 185 2.70e-20 90.9
MS.gene76542.t1 AT3G10590 45.349 86 44 2 85 168 91 175 1.29e-16 77.8

Find 107 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCTCCTTTGCCTAGCTTT+TGG 0.260546 2.3:-2872812 None:intergenic
GAAGCGCCGCCGCTGCCGGC+GGG 0.281178 2.3:+2870327 MS.gene76542:CDS
CATCAAGAAAAGTGCCAGTA+TGG 0.298362 2.3:+2870388 MS.gene76542:CDS
GGAAGAACATAGATTGTTCT+TGG 0.306357 2.3:+2872782 MS.gene76542:CDS
GGAAGTAGTATTTGCTCTTC+TGG 0.308188 2.3:-2873535 None:intergenic
GAAAATGAGGCAGGTAAATA+AGG 0.320772 2.3:-2873730 None:intergenic
GATGAAGAGCAGCGAGGTTT+AGG 0.321604 2.3:-2870415 None:intergenic
TCGAGAAGCGCCGCCGCTGC+CGG 0.338043 2.3:+2870323 MS.gene76542:CDS
TCCTTTGGAATGACTGGTAT+TGG 0.340477 2.3:-2873826 None:intergenic
CCCCTTTCCTTGAAGTTGTT+AGG 0.350389 2.3:+2873928 MS.gene76542:CDS
TCTGGCATCGAAGTTGAATC+TGG 0.363477 2.3:-2873517 None:intergenic
TGGAATGCTGATTGCCTTGA+GGG 0.363738 2.3:-2873955 None:intergenic
CTTCACCCCGCCGGCAGCGG+CGG 0.373251 2.3:-2870333 None:intergenic
TCAACATTGACAGGTTCCTT+TGG 0.380571 2.3:-2873841 None:intergenic
TTTAGATCAGAACCGCTAAC+TGG 0.381028 2.3:-2873988 None:intergenic
TCAAAGGGAGCTCCAATTGA+TGG 0.384606 2.3:-2873760 None:intergenic
TGATCCCATTGTAGTCTCAT+TGG 0.391511 2.3:-2873671 None:intergenic
GAATGTCTCATCTGAGCATT+GGG 0.393213 2.3:+2873875 MS.gene76542:CDS
TCCTTTGTTGACTTCTTCAA+AGG 0.400771 2.3:-2873776 None:intergenic
AGAAGCGCCGCCGCTGCCGG+CGG 0.417090 2.3:+2870326 MS.gene76542:CDS
AAAGCCTCAAACTGCTTGAA+TGG 0.420085 2.3:-2874028 None:intergenic
AAGCGCCGCCGCTGCCGGCG+GGG 0.428113 2.3:+2870328 MS.gene76542:CDS
GAGACTACAATGGGATCAAA+TGG 0.433570 2.3:+2873676 MS.gene76542:CDS
CCTTTGTTGACTTCTTCAAA+GGG 0.434334 2.3:-2873775 None:intergenic
CGGTTCAAAACAAGGTGAAC+CGG 0.438885 2.3:-2870462 None:intergenic
TCCTAACAACTTCAAGGAAA+GGG 0.440079 2.3:-2873929 None:intergenic
TCTTCAGATGTAGCTTCCAT+TGG 0.445737 2.3:-2873634 None:intergenic
AAAAGCTAGGCAAAGGAGAC+TGG 0.448710 2.3:+2872814 MS.gene76542:CDS
GGGAAGAATCCTTGCGTCAT+TGG 0.453748 2.3:-2873706 None:intergenic
ACAGGTTCCTTTGGAATGAC+TGG 0.453964 2.3:-2873832 None:intergenic
GAGGTTTAGGTTCCCCATAC+TGG 0.455596 2.3:-2870402 None:intergenic
AAAGCAGAAGAAGCATGAAC+CGG 0.455984 2.3:-2870518 None:intergenic
AAGCTTCACCCCGCCGGCAG+CGG 0.457103 2.3:-2870336 None:intergenic
GAACATAGATTGTTCTTGGT+TGG 0.461435 2.3:+2872786 MS.gene76542:CDS
CATGACTTGCTACTTGAGTA+GGG 0.462555 2.3:-2872872 None:intergenic
AACGCCATTCAAGCAGTTTG+AGG 0.463617 2.3:+2874024 MS.gene76542:CDS
GCATGACTTGCTACTTGAGT+AGG 0.464793 2.3:-2872873 None:intergenic
GAATGAATACTGACCACATC+AGG 0.481403 2.3:-2872966 None:intergenic
TTTCTTGATGATTGATCCAT+CGG 0.482732 2.3:-2870375 None:intergenic
AGCTCCAATTGATGGCCATA+TGG 0.483931 2.3:-2873752 None:intergenic
GGGCTCTCCTAACAACTTCA+AGG 0.485368 2.3:-2873935 None:intergenic
CATGCAAATGCTCCAGTTAG+CGG 0.489459 2.3:+2873976 MS.gene76542:CDS
ACAAGTTCATCAACATTGAC+AGG 0.494176 2.3:-2873850 None:intergenic
TCATCAGACAAATAACCATC+CGG 0.495302 2.3:-2870494 None:intergenic
ACGGACATGTCCGTGAGTTA+TGG 0.495840 2.3:-2870301 None:intergenic
TCTTCTTCGCCGCTGAACCC+CGG 0.498426 2.3:+2870443 MS.gene76542:CDS
GAGAACTCACAACCTTGTAA+TGG 0.500646 2.3:+2873565 MS.gene76542:CDS
TGGTTATTTGTCTGATGACC+CGG 0.508683 2.3:+2870499 MS.gene76542:CDS
TTTCGACATGGCTCCTGATG+TGG 0.516858 2.3:+2872953 MS.gene76542:CDS
CCTAACAACTTCAAGGAAAG+GGG 0.517543 2.3:-2873928 None:intergenic
GCAGCGGCGGCGCTTCTCGA+CGG 0.517789 2.3:-2870320 None:intergenic
CTATGTTCTTCCTCAGTCCA+TGG 0.518156 2.3:-2872771 None:intergenic
GGTTCAAAACAAGGTGAACC+GGG 0.521484 2.3:-2870461 None:intergenic
TGATGGCCATATGGAAAATG+AGG 0.522407 2.3:-2873743 None:intergenic
AGGAGAGACATCGTATCATC+AGG 0.522529 2.3:+2873795 MS.gene76542:CDS
AGGAGCCATGTCGAAAAGAC+TGG 0.523291 2.3:-2872946 None:intergenic
ATCAAGAAAAGTGCCAGTAT+GGG 0.525026 2.3:+2870389 MS.gene76542:CDS
CGCTAACTGGAGCATTTGCA+TGG 0.525907 2.3:-2873975 None:intergenic
GGAATGTCTCATCTGAGCAT+TGG 0.531337 2.3:+2873874 MS.gene76542:CDS
TTGGTTGGTCTCCAAAAGCT+AGG 0.538073 2.3:+2872801 MS.gene76542:CDS
ATCTGAAGAAAATGTAGAAG+AGG 0.540720 2.3:+2873648 MS.gene76542:CDS
ATGAGGCAGGTAAATAAGGT+GGG 0.541274 2.3:-2873726 None:intergenic
CTCCTAACAACTTCAAGGAA+AGG 0.542864 2.3:-2873930 None:intergenic
TCCTGGTAGCATTACTCTGT+CGG 0.543171 2.3:-2872911 None:intergenic
GGCCATATGGAAAATGAGGC+AGG 0.543383 2.3:-2873739 None:intergenic
ATGGAATGCTGATTGCCTTG+AGG 0.546697 2.3:-2873956 None:intergenic
GGCGGCGATTCGTGATGACT+CGG 0.556358 2.3:+2870252 None:intergenic
CAAGTCAGAATATGAACCAA+TGG 0.562551 2.3:+2873618 MS.gene76542:CDS
CAAGGTGAACCGGGGTTCAG+CGG 0.568397 2.3:-2870452 None:intergenic
CAAGGTTGTGAGTTCTCAGA+AGG 0.569930 2.3:-2873559 None:intergenic
GAATGACTGGTATTGGCTTG+AGG 0.572196 2.3:-2873819 None:intergenic
GAGGCCAATGAGACTACAAT+GGG 0.576022 2.3:+2873667 MS.gene76542:CDS
ACTGGAACGTCTCTTCCTCC+TGG 0.576071 2.3:-2872928 None:intergenic
TCTGAGCATTGGGGAAACAC+AGG 0.576890 2.3:+2873885 MS.gene76542:CDS
AGTTGTTAGGAGAGCCCTCA+AGG 0.579322 2.3:+2873941 MS.gene76542:CDS
AAGCAGAAGAAGCATGAACC+GGG 0.580723 2.3:-2870517 None:intergenic
AATGAGGCAGGTAAATAAGG+TGG 0.582975 2.3:-2873727 None:intergenic
TCATGCGGCGGTTCAAAACA+AGG 0.584178 2.3:-2870470 None:intergenic
GTCAATGTTGATGAACTTGT+GGG 0.584457 2.3:+2873853 MS.gene76542:CDS
TTTGGTGTTAGATTAACCGA+TGG 0.592133 2.3:+2870359 MS.gene76542:CDS
TGTCAATGTTGATGAACTTG+TGG 0.593101 2.3:+2873852 MS.gene76542:CDS
TGCTCTCACTGCAGCAACAA+CGG 0.601199 2.3:+2870278 MS.gene76542:CDS
GGTTGTGAGTTCTCAGAAGG+TGG 0.602477 2.3:-2873556 None:intergenic
GAACCGCCGCATGACCCGGA+TGG 0.608961 2.3:+2870479 MS.gene76542:CDS
GGTCTCCAAAAGCTAGGCAA+AGG 0.614877 2.3:+2872807 MS.gene76542:CDS
AAATAACCATCCGGGTCATG+CGG 0.616074 2.3:-2870485 None:intergenic
AGAGGCCAATGAGACTACAA+TGG 0.616526 2.3:+2873666 MS.gene76542:CDS
GCAACAACGGCCATAACTCA+CGG 0.617037 2.3:+2870291 MS.gene76542:CDS
CATCAGACAAATAACCATCC+GGG 0.628665 2.3:-2870493 None:intergenic
CTAACAACTTCAAGGAAAGG+GGG 0.629370 2.3:-2873927 None:intergenic
CTAGGCAAAGGAGACTGGCG+AGG 0.631792 2.3:+2872819 MS.gene76542:CDS
TCAAGAAAAGTGCCAGTATG+GGG 0.632856 2.3:+2870390 MS.gene76542:CDS
CCCTTTGAAGAAGTCAACAA+AGG 0.636313 2.3:+2873775 MS.gene76542:CDS
TTGAGAGACAGATTTAGTGA+TGG 0.636747 2.3:-2873598 None:intergenic
TAACCATCCGGGTCATGCGG+CGG 0.638437 2.3:-2870482 None:intergenic
TCCGACAGAGTAATGCTACC+AGG 0.640061 2.3:+2872910 MS.gene76542:CDS
GCCAATACCAGTCATTCCAA+AGG 0.641238 2.3:+2873825 MS.gene76542:CDS
ATGACTTGCTACTTGAGTAG+GGG 0.646346 2.3:-2872871 None:intergenic
GGATTCACACCAATGACGCA+AGG 0.652345 2.3:+2873697 MS.gene76542:CDS
TAGGCAAAGGAGACTGGCGA+GGG 0.653435 2.3:+2872820 MS.gene76542:CDS
TAACAACTTCAAGGAAAGGG+GGG 0.654354 2.3:-2873926 None:intergenic
TTTAGGTGTTCCATGGACTG+AGG 0.681364 2.3:+2872761 MS.gene76542:intron
AGCGGTTCTGATCTAAACAG+TGG 0.708017 2.3:+2873994 MS.gene76542:CDS
GTTCAAAACAAGGTGAACCG+GGG 0.719453 2.3:-2870460 None:intergenic
AATGTCTCATCTGAGCATTG+GGG 0.733687 2.3:+2873876 MS.gene76542:CDS
AAGAATGATGAAGAGCAGCG+AGG 0.735471 2.3:-2870421 None:intergenic
GACAGAGTAATGCTACCAGG+AGG 0.755723 2.3:+2872913 MS.gene76542:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTAATTTTATTT+TGG + chr2.3:2870830-2870849 MS.gene76542:intron 0.0%
!! AATAAAAAAGTTAATAAGAT+AGG - chr2.3:2873475-2873494 None:intergenic 10.0%
!! TAAAGAATAACAAAATTTAA+TGG - chr2.3:2871613-2871632 None:intergenic 10.0%
!! TTAAAAATTACAAATATTTG+TGG - chr2.3:2872392-2872411 None:intergenic 10.0%
!! CATAGATAAAAAATATGTTA+TGG - chr2.3:2873140-2873159 None:intergenic 15.0%
!! TAGTTTACTAGAAAAATTAA+GGG + chr2.3:2872359-2872378 MS.gene76542:intron 15.0%
!! TTAGTTTACTAGAAAAATTA+AGG + chr2.3:2872358-2872377 MS.gene76542:intron 15.0%
!!! TAAAAATGTTGATAATAACT+TGG + chr2.3:2870637-2870656 MS.gene76542:intron 15.0%
!!! TGTTAAGTTTTTATAAAATG+TGG + chr2.3:2872147-2872166 MS.gene76542:intron 15.0%
!! AAAAAAAACTTAGTGTAACA+GGG + chr2.3:2872243-2872262 MS.gene76542:intron 20.0%
!! AATCTAATCAACAAGAAAAA+AGG - chr2.3:2872713-2872732 None:intergenic 20.0%
!! ATTAATGAACATATCATAAG+CGG + chr2.3:2871457-2871476 MS.gene76542:intron 20.0%
!! GATAATATACAGTTAAGTAT+TGG - chr2.3:2871655-2871674 None:intergenic 20.0%
!! TAAAAAAAACTTAGTGTAAC+AGG + chr2.3:2872242-2872261 MS.gene76542:intron 20.0%
!! TAATGTCATTATTGTTTCAT+TGG + chr2.3:2871016-2871035 MS.gene76542:intron 20.0%
!! TTAAAAAAGAATAGAACAGA+AGG + chr2.3:2871795-2871814 MS.gene76542:intron 20.0%
!! TTATGGTAATTAGCAAATAA+AGG - chr2.3:2873374-2873393 None:intergenic 20.0%
!!! AATATCTGGAATTTATATTG+AGG + chr2.3:2871893-2871912 MS.gene76542:intron 20.0%
!!! TATTTGCTAATTACCATAAA+CGG + chr2.3:2873375-2873394 MS.gene76542:intron 20.0%
!!! TATTTTTGGTTTTGGTTTTT+TGG + chr2.3:2870887-2870906 MS.gene76542:intron 20.0%
! AAAAAAACTTAGTGTAACAG+GGG + chr2.3:2872244-2872263 MS.gene76542:intron 25.0%
! AAATGACAACTAAAACGAAT+TGG - chr2.3:2871563-2871582 None:intergenic 25.0%
! AATGACAACTAAAACGAATT+GGG - chr2.3:2871562-2871581 None:intergenic 25.0%
! AGCATAAAAATCATACATCT+AGG - chr2.3:2871831-2871850 None:intergenic 25.0%
! ATAACTGTACTCTGTTTATA+TGG - chr2.3:2873198-2873217 None:intergenic 25.0%
! ATCTACTATTTGAAAGTTAC+TGG + chr2.3:2871942-2871961 MS.gene76542:intron 25.0%
! CATATATATTGCTTATAAGC+TGG - chr2.3:2873105-2873124 None:intergenic 25.0%
! CTTCTGGATTATGAATTAAA+GGG - chr2.3:2872549-2872568 None:intergenic 25.0%
! TTTCAACAAACCAAACAATT+AGG - chr2.3:2871434-2871453 None:intergenic 25.0%
!! ACTTTTGTAACAAGGATATA+AGG + chr2.3:2872516-2872535 MS.gene76542:intron 25.0%
!! ATTTGCTAATTACCATAAAC+GGG + chr2.3:2873376-2873395 MS.gene76542:intron 25.0%
!! GTTGTATTGAACTTTGAAAA+CGG + chr2.3:2871732-2871751 MS.gene76542:intron 25.0%
!! TTTGTCCTTTTGTATGTTTT+AGG + chr2.3:2872744-2872763 MS.gene76542:intron 25.0%
!!! CATTATTGTTTCATTGGTTT+TGG + chr2.3:2871022-2871041 MS.gene76542:intron 25.0%
!!! TATGTTTTGAGAAAATACCT+TGG + chr2.3:2873156-2873175 MS.gene76542:intron 25.0%
!!! TGAGAGGCTTTAAATAAAAT+AGG - chr2.3:2872591-2872610 None:intergenic 25.0%
!!! TTAATTTGGTGCCATTTTTT+GGG + chr2.3:2872467-2872486 MS.gene76542:intron 25.0%
!!! TTTAATTTGGTGCCATTTTT+TGG + chr2.3:2872466-2872485 MS.gene76542:intron 25.0%
AAAGGAAAAACAAAGTTGAG+AGG - chr2.3:2872607-2872626 None:intergenic 30.0%
AACCTGAGTACATTTAAACA+TGG - chr2.3:2872007-2872026 None:intergenic 30.0%
AATGAATTGTTCCTGATATC+TGG + chr2.3:2870857-2870876 MS.gene76542:intron 30.0%
AATGACAAATCCCCAAAAAA+TGG - chr2.3:2872481-2872500 None:intergenic 30.0%
AATGGCACCAAATTAAACTA+TGG - chr2.3:2872463-2872482 None:intergenic 30.0%
ATAGGGGTTGAATTTATAGT+AGG + chr2.3:2871102-2871121 MS.gene76542:intron 30.0%
ATCTGAAGAAAATGTAGAAG+AGG + chr2.3:2873648-2873667 MS.gene76542:CDS 30.0%
ATGACAACTAAAACGAATTG+GGG - chr2.3:2871561-2871580 None:intergenic 30.0%
CAAACGAAAAGTAAAGTTGT+TGG + chr2.3:2870683-2870702 MS.gene76542:intron 30.0%
CAGTTGTATTATGATCAGTT+TGG + chr2.3:2872187-2872206 MS.gene76542:intron 30.0%
CCTTCTGGATTATGAATTAA+AGG - chr2.3:2872550-2872569 None:intergenic 30.0%
CCTTTAATTCATAATCCAGA+AGG + chr2.3:2872547-2872566 MS.gene76542:intron 30.0%
CTAAATACTATGTGTAACAG+TGG + chr2.3:2872213-2872232 MS.gene76542:intron 30.0%
CTACAAGCCATAGTTTAATT+TGG + chr2.3:2872453-2872472 MS.gene76542:intron 30.0%
GAACACCTAAAACATACAAA+AGG - chr2.3:2872752-2872771 None:intergenic 30.0%
GAATTTATAGTAGGACACAA+GGG + chr2.3:2871111-2871130 MS.gene76542:intron 30.0%
GAGTACATTTAAACATGGAA+AGG - chr2.3:2872002-2872021 None:intergenic 30.0%
GCAAATTAAGTTATCCAAAC+TGG - chr2.3:2871168-2871187 None:intergenic 30.0%
GTGTTCCATAAAATAAAACG+TGG - chr2.3:2870916-2870935 None:intergenic 30.0%
TGAATTTATAGTAGGACACA+AGG + chr2.3:2871110-2871129 MS.gene76542:intron 30.0%
TTATTGCACAGAGAAATAAG+TGG - chr2.3:2871683-2871702 None:intergenic 30.0%
TTCCATGTTTAAATGTACTC+AGG + chr2.3:2872002-2872021 MS.gene76542:intron 30.0%
! GAACTTTGAAAACGGAAAAT+AGG + chr2.3:2871740-2871759 MS.gene76542:intron 30.0%
! TTTCTTGATGATTGATCCAT+CGG - chr2.3:2870378-2870397 None:intergenic 30.0%
!! CAACAACTTTACTTTTCGTT+TGG - chr2.3:2870685-2870704 None:intergenic 30.0%
!!! GGTATCCACGTTTTATTTTA+TGG + chr2.3:2870908-2870927 MS.gene76542:intron 30.0%
!!! GTGAAAGGTATTTTTGGTTT+TGG + chr2.3:2870879-2870898 MS.gene76542:intron 30.0%
!!! TAATTTGGTGCCATTTTTTG+GGG + chr2.3:2872468-2872487 MS.gene76542:intron 30.0%
!!! TATCTGGTGAAAGGTATTTT+TGG + chr2.3:2870873-2870892 MS.gene76542:intron 30.0%
AACAAGGGGATAAAAAAGCT+AGG - chr2.3:2872313-2872332 None:intergenic 35.0%
AATACCTTTCACCAGATATC+AGG - chr2.3:2870871-2870890 None:intergenic 35.0%
ACAAGGGGATAAAAAAGCTA+GGG - chr2.3:2872312-2872331 None:intergenic 35.0%
ACAAGTTCATCAACATTGAC+AGG - chr2.3:2873853-2873872 None:intergenic 35.0%
AGTATGACTGCTTTAACAAG+GGG - chr2.3:2872327-2872346 None:intergenic 35.0%
CAACAAGAAAAAAGGATGCT+CGG - chr2.3:2872705-2872724 None:intergenic 35.0%
CAAGTCAGAATATGAACCAA+TGG + chr2.3:2873618-2873637 MS.gene76542:CDS 35.0%
CTCTCAAAATACTAGTACCA+TGG - chr2.3:2871064-2871083 None:intergenic 35.0%
CTTACTTTCATAAGCTCTTC+AGG - chr2.3:2871249-2871268 None:intergenic 35.0%
GAAAATGAGGCAGGTAAATA+AGG - chr2.3:2873733-2873752 None:intergenic 35.0%
GAACATAGATTGTTCTTGGT+TGG + chr2.3:2872786-2872805 MS.gene76542:CDS 35.0%
GAGTATGACTGCTTTAACAA+GGG - chr2.3:2872328-2872347 None:intergenic 35.0%
GGAAGAACATAGATTGTTCT+TGG + chr2.3:2872782-2872801 MS.gene76542:CDS 35.0%
GTGGAAAACGGTTTAATATC+TGG + chr2.3:2871879-2871898 MS.gene76542:intron 35.0%
TCATCAGACAAATAACCATC+CGG - chr2.3:2870497-2870516 None:intergenic 35.0%
TCCTAACAACTTCAAGGAAA+GGG - chr2.3:2873932-2873951 None:intergenic 35.0%
TGAGACCATTGGAGTTAATA+GGG + chr2.3:2871085-2871104 MS.gene76542:intron 35.0%
TGAGTATGACTGCTTTAACA+AGG - chr2.3:2872329-2872348 None:intergenic 35.0%
TTCAATATCCAGTTACAACG+AGG - chr2.3:2873407-2873426 None:intergenic 35.0%
TTGAGACCATTGGAGTTAAT+AGG + chr2.3:2871084-2871103 MS.gene76542:intron 35.0%
TTGAGAGACAGATTTAGTGA+TGG - chr2.3:2873601-2873620 None:intergenic 35.0%
! AAGCTGTGACTTTTGTAACA+AGG + chr2.3:2872508-2872527 MS.gene76542:intron 35.0%
! AGAAAATACCTTGGTGTGTT+TGG + chr2.3:2873165-2873184 MS.gene76542:intron 35.0%
! GGAACACATTTTCGTTTGAT+TGG + chr2.3:2870929-2870948 MS.gene76542:intron 35.0%
! GGTTGTGATTTTCCATTACA+AGG - chr2.3:2873580-2873599 None:intergenic 35.0%
! GTACTGGTGTTAATAAGGAT+AGG - chr2.3:2873081-2873100 None:intergenic 35.0%
! GTCAATGTTGATGAACTTGT+GGG + chr2.3:2873853-2873872 MS.gene76542:CDS 35.0%
! TGTCAATGTTGATGAACTTG+TGG + chr2.3:2873852-2873871 MS.gene76542:CDS 35.0%
! TTACCGACATGAGTTTGTTT+GGG - chr2.3:2871498-2871517 None:intergenic 35.0%
! TTTACCGACATGAGTTTGTT+TGG - chr2.3:2871499-2871518 None:intergenic 35.0%
! TTTGATTGGTCACGAAATGA+CGG + chr2.3:2870943-2870962 MS.gene76542:intron 35.0%
! TTTTCCATATGGCCATCAAT+TGG + chr2.3:2873748-2873767 MS.gene76542:CDS 35.0%
!! AGACTGTTGATTCATTAAGC+AGG + chr2.3:2872679-2872698 MS.gene76542:intron 35.0%
!! ATCAAGAAAAGTGCCAGTAT+GGG + chr2.3:2870389-2870408 MS.gene76542:CDS 35.0%
!! ATTTTGAGAGTTGAGACCAT+TGG + chr2.3:2871074-2871093 MS.gene76542:intron 35.0%
!! CACGTAATTTTGTTGTGTCA+AGG + chr2.3:2872847-2872866 MS.gene76542:CDS 35.0%
!! CCTTTGTTGACTTCTTCAAA+GGG - chr2.3:2873778-2873797 None:intergenic 35.0%
!! TCCTTTGTTGACTTCTTCAA+AGG - chr2.3:2873779-2873798 None:intergenic 35.0%
!! TGGTTGATGAACTTCATCAA+AGG - chr2.3:2871405-2871424 None:intergenic 35.0%
!! TGTATGTTTTAGGTGTTCCA+TGG + chr2.3:2872754-2872773 MS.gene76542:intron 35.0%
!! TTTGGTGTTAGATTAACCGA+TGG + chr2.3:2870359-2870378 MS.gene76542:CDS 35.0%
!!! TACCTTTTTTTCTTTCGCTG+CGG - chr2.3:2870553-2870572 None:intergenic 35.0%
AACTAATCTCCTCGAAGACA+TGG - chr2.3:2872631-2872650 None:intergenic 40.0%
AATGAGGCAGGTAAATAAGG+TGG - chr2.3:2873730-2873749 None:intergenic 40.0%
ACACAAGGGAATGTTTACGT+TGG + chr2.3:2871125-2871144 MS.gene76542:intron 40.0%
ACCAAACAATTAGGCTCAAG+TGG - chr2.3:2871425-2871444 None:intergenic 40.0%
ACCACACATTATAAGCGTGT+TGG + chr2.3:2870709-2870728 MS.gene76542:intron 40.0%
ACCACTTGAGCCTAATTGTT+TGG + chr2.3:2871421-2871440 MS.gene76542:intron 40.0%
ACGTTGGTATGGTACGAATT+AGG + chr2.3:2871141-2871160 MS.gene76542:intron 40.0%
AGGGAATGTTTACGTTGGTA+TGG + chr2.3:2871130-2871149 MS.gene76542:intron 40.0%
ATGAGGCAGGTAAATAAGGT+GGG - chr2.3:2873729-2873748 None:intergenic 40.0%
CATCAGACAAATAACCATCC+GGG - chr2.3:2870496-2870515 None:intergenic 40.0%
CCTAACAACTTCAAGGAAAG+GGG - chr2.3:2873931-2873950 None:intergenic 40.0%
CTAACAACTTCAAGGAAAGG+GGG - chr2.3:2873930-2873949 None:intergenic 40.0%
CTCCTAACAACTTCAAGGAA+AGG - chr2.3:2873933-2873952 None:intergenic 40.0%
CTTTCTTCCACAAACAACAC+GGG + chr2.3:2871849-2871868 MS.gene76542:intron 40.0%
GAATGAATACTGACCACATC+AGG - chr2.3:2872969-2872988 None:intergenic 40.0%
GAATGTCTCATCTGAGCATT+GGG + chr2.3:2873875-2873894 MS.gene76542:CDS 40.0%
GAGAACTCACAACCTTGTAA+TGG + chr2.3:2873565-2873584 MS.gene76542:CDS 40.0%
GAGACCATTGGAGTTAATAG+GGG + chr2.3:2871086-2871105 MS.gene76542:intron 40.0%
GAGACTACAATGGGATCAAA+TGG + chr2.3:2873676-2873695 MS.gene76542:CDS 40.0%
GCTTTCTTCCACAAACAACA+CGG + chr2.3:2871848-2871867 MS.gene76542:intron 40.0%
GGAAGTAGTATTTGCTCTTC+TGG - chr2.3:2873538-2873557 None:intergenic 40.0%
TAACAACTTCAAGGAAAGGG+GGG - chr2.3:2873929-2873948 None:intergenic 40.0%
TCAACATTGACAGGTTCCTT+TGG - chr2.3:2873844-2873863 None:intergenic 40.0%
TCAACCCCTATTAACTCCAA+TGG - chr2.3:2871093-2871112 None:intergenic 40.0%
TCAAGCAACAAACTCTTGTC+TGG - chr2.3:2871971-2871990 None:intergenic 40.0%
TCCAACACGCTTATAATGTG+TGG - chr2.3:2870713-2870732 None:intergenic 40.0%
TCTCCCAAACAAACTCATGT+CGG + chr2.3:2871492-2871511 MS.gene76542:intron 40.0%
TCTTCAGATGTAGCTTCCAT+TGG - chr2.3:2873637-2873656 None:intergenic 40.0%
TGAGAAACTCAACAGAGTCA+AGG - chr2.3:2873283-2873302 None:intergenic 40.0%
TGATCCCATTGTAGTCTCAT+TGG - chr2.3:2873674-2873693 None:intergenic 40.0%
TGATGGCCATATGGAAAATG+AGG - chr2.3:2873746-2873765 None:intergenic 40.0%
TGGTTATTTGTCTGATGACC+CGG + chr2.3:2870499-2870518 MS.gene76542:CDS 40.0%
TGTTCCTGATATCTGGTGAA+AGG + chr2.3:2870864-2870883 MS.gene76542:intron 40.0%
TTGCTTATAAGCTGGTGTAC+TGG - chr2.3:2873097-2873116 None:intergenic 40.0%
TTTAGATCAGAACCGCTAAC+TGG - chr2.3:2873991-2874010 None:intergenic 40.0%
TTTCATAAGCTCTTCAGGAG+AGG - chr2.3:2871244-2871263 None:intergenic 40.0%
TTTCCTTTACCATGTCTTCG+AGG + chr2.3:2872619-2872638 MS.gene76542:intron 40.0%
TTTCTTCCACAAACAACACG+GGG + chr2.3:2871850-2871869 MS.gene76542:intron 40.0%
! AAAACCAGAGTTCGATTCGT+GGG - chr2.3:2871380-2871399 None:intergenic 40.0%
! AAAGCAGAAGAAGCATGAAC+CGG - chr2.3:2870521-2870540 None:intergenic 40.0%
! AATGTCTCATCTGAGCATTG+GGG + chr2.3:2873876-2873895 MS.gene76542:CDS 40.0%
! CCCTTTGAAGAAGTCAACAA+AGG + chr2.3:2873775-2873794 MS.gene76542:CDS 40.0%
! CTGGTGTACTGGTGTTAATA+AGG - chr2.3:2873086-2873105 None:intergenic 40.0%
! CTGGTGTTAATAAGGATAGG+AGG - chr2.3:2873078-2873097 None:intergenic 40.0%
! GTACCATGGATTGTACCATA+CGG - chr2.3:2871050-2871069 None:intergenic 40.0%
! TACCTGCCTCATTTTCCATA+TGG + chr2.3:2873737-2873756 MS.gene76542:CDS 40.0%
! TTTTTCTTCCGTTAACCCCT+CGG + chr2.3:2871281-2871300 MS.gene76542:intron 40.0%
!! ATGACTTGCTACTTGAGTAG+GGG - chr2.3:2872874-2872893 None:intergenic 40.0%
!! CATCAAGAAAAGTGCCAGTA+TGG + chr2.3:2870388-2870407 MS.gene76542:CDS 40.0%
!! CATGACTTGCTACTTGAGTA+GGG - chr2.3:2872875-2872894 None:intergenic 40.0%
!! GTTGTGTCTGGCTTTAATAC+AGG + chr2.3:2872272-2872291 MS.gene76542:intron 40.0%
!! TCAAGAAAAGTGCCAGTATG+GGG + chr2.3:2870390-2870409 MS.gene76542:CDS 40.0%
!! TCCTTTGGAATGACTGGTAT+TGG - chr2.3:2873829-2873848 None:intergenic 40.0%
!!! GACCCTAGTATTTTGGAGTT+CGG + chr2.3:2871317-2871336 MS.gene76542:intron 40.0%
!!! TCATTGGTTTTGGTTCCGTA+TGG + chr2.3:2871032-2871051 MS.gene76542:intron 40.0%
AAAAGCTAGGCAAAGGAGAC+TGG + chr2.3:2872814-2872833 MS.gene76542:CDS 45.0%
AAAATACTAGGGTCCTTCCC+CGG - chr2.3:2871311-2871330 None:intergenic 45.0%
AAATAACCATCCGGGTCATG+CGG - chr2.3:2870488-2870507 None:intergenic 45.0%
AACGAGGATGAACCCGTTTA+TGG - chr2.3:2873391-2873410 None:intergenic 45.0%
AAGAATGATGAAGAGCAGCG+AGG - chr2.3:2870424-2870443 None:intergenic 45.0%
AGAGGCCAATGAGACTACAA+TGG + chr2.3:2873666-2873685 MS.gene76542:CDS 45.0%
AGGAGAGACATCGTATCATC+AGG + chr2.3:2873795-2873814 MS.gene76542:CDS 45.0%
AGGCCGAACTCCAAAATACT+AGG - chr2.3:2871323-2871342 None:intergenic 45.0%
CAAGGTTGTGAGTTCTCAGA+AGG - chr2.3:2873562-2873581 None:intergenic 45.0%
CATGCAAATGCTCCAGTTAG+CGG + chr2.3:2873976-2873995 MS.gene76542:CDS 45.0%
CCCCTTTCCTTGAAGTTGTT+AGG + chr2.3:2873928-2873947 MS.gene76542:CDS 45.0%
CGGTTCAAAACAAGGTGAAC+CGG - chr2.3:2870465-2870484 None:intergenic 45.0%
CTATGTTCTTCCTCAGTCCA+TGG - chr2.3:2872774-2872793 None:intergenic 45.0%
GAGGCCAATGAGACTACAAT+GGG + chr2.3:2873667-2873686 MS.gene76542:CDS 45.0%
GATTCAAGCCAAACACACCA+AGG - chr2.3:2873176-2873195 None:intergenic 45.0%
GCCAAGCTATACTTACCTCA+AGG - chr2.3:2871343-2871362 None:intergenic 45.0%
GCCAATACCAGTCATTCCAA+AGG + chr2.3:2873825-2873844 MS.gene76542:CDS 45.0%
GCCTTGAGGTAAGTATAGCT+TGG + chr2.3:2871339-2871358 MS.gene76542:intron 45.0%
GGAATGTCTCATCTGAGCAT+TGG + chr2.3:2873874-2873893 MS.gene76542:CDS 45.0%
GGCCGAACTCCAAAATACTA+GGG - chr2.3:2871322-2871341 None:intergenic 45.0%
GGTACGAATTAGGTCCAGTT+TGG + chr2.3:2871151-2871170 MS.gene76542:intron 45.0%
GGTTCAAAACAAGGTGAACC+GGG - chr2.3:2870464-2870483 None:intergenic 45.0%
GTTCAAAACAAGGTGAACCG+GGG - chr2.3:2870463-2870482 None:intergenic 45.0%
GTTCCGTATGGTACAATCCA+TGG + chr2.3:2871044-2871063 MS.gene76542:intron 45.0%
TCAAAGGGAGCTCCAATTGA+TGG - chr2.3:2873763-2873782 None:intergenic 45.0%
TCCTGGTAGCATTACTCTGT+CGG - chr2.3:2872914-2872933 None:intergenic 45.0%
TCTCCTCGAAGACATGGTAA+AGG - chr2.3:2872625-2872644 None:intergenic 45.0%
TTCTTCCACAAACAACACGG+GGG + chr2.3:2871851-2871870 MS.gene76542:intron 45.0%
! AAGCAGAAGAAGCATGAACC+GGG - chr2.3:2870520-2870539 None:intergenic 45.0%
! ACGTTCCAGTCTTTTCGACA+TGG + chr2.3:2872941-2872960 MS.gene76542:CDS 45.0%
! AGCGGTTCTGATCTAAACAG+TGG + chr2.3:2873994-2874013 MS.gene76542:CDS 45.0%
! AGCTCCAATTGATGGCCATA+TGG - chr2.3:2873755-2873774 None:intergenic 45.0%
! ATGGAATGCTGATTGCCTTG+AGG - chr2.3:2873959-2873978 None:intergenic 45.0%
! CAAAACCAGAGTTCGATTCG+TGG - chr2.3:2871381-2871400 None:intergenic 45.0%
! GAGGAGATTAGTTGCTGCAT+CGG + chr2.3:2872638-2872657 MS.gene76542:intron 45.0%
! TCTGGCATCGAAGTTGAATC+TGG - chr2.3:2873520-2873539 None:intergenic 45.0%
! TGGAATGCTGATTGCCTTGA+GGG - chr2.3:2873958-2873977 None:intergenic 45.0%
! TTTAGGTGTTCCATGGACTG+AGG + chr2.3:2872761-2872780 MS.gene76542:intron 45.0%
!! ACAGGTTCCTTTGGAATGAC+TGG - chr2.3:2873835-2873854 None:intergenic 45.0%
!! AGTCTCCTTTGCCTAGCTTT+TGG - chr2.3:2872815-2872834 None:intergenic 45.0%
!! GAATGACTGGTATTGGCTTG+AGG - chr2.3:2873822-2873841 None:intergenic 45.0%
!! GCATGACTTGCTACTTGAGT+AGG - chr2.3:2872876-2872895 None:intergenic 45.0%
!! TTGGTTGGTCTCCAAAAGCT+AGG + chr2.3:2872801-2872820 MS.gene76542:CDS 45.0%
!!! CTTTTTTTCTTTCGCTGCGG+CGG - chr2.3:2870550-2870569 None:intergenic 45.0%
!!! TATTTTGGAGTTCGGCCTTG+AGG + chr2.3:2871325-2871344 MS.gene76542:intron 45.0%
!!! TTTTTTTCTTTCGCTGCGGC+GGG - chr2.3:2870549-2870568 None:intergenic 45.0%
AAATACTAGGGTCCTTCCCC+GGG - chr2.3:2871310-2871329 None:intergenic 50.0%
AACTTCAAGGAAAGGGGGGA+AGG - chr2.3:2873925-2873944 None:intergenic 50.0%
ACAGGGGTAACTGTTGTGTC+TGG + chr2.3:2872260-2872279 MS.gene76542:intron 50.0%
ACGGACATGTCCGTGAGTTA+TGG - chr2.3:2870304-2870323 None:intergenic 50.0%
AGGAGCCATGTCGAAAAGAC+TGG - chr2.3:2872949-2872968 None:intergenic 50.0%
AGTTGTTAGGAGAGCCCTCA+AGG + chr2.3:2873941-2873960 MS.gene76542:CDS 50.0%
CGCCGCAGCGAAAGAAAAAA+AGG + chr2.3:2870548-2870567 MS.gene76542:CDS 50.0%
GACAGAGTAATGCTACCAGG+AGG + chr2.3:2872913-2872932 MS.gene76542:CDS 50.0%
GATGAAGAGCAGCGAGGTTT+AGG - chr2.3:2870418-2870437 None:intergenic 50.0%
GCAACAACGGCCATAACTCA+CGG + chr2.3:2870291-2870310 MS.gene76542:CDS 50.0%
GGATTCACACCAATGACGCA+AGG + chr2.3:2873697-2873716 MS.gene76542:CDS 50.0%
GGCCATATGGAAAATGAGGC+AGG - chr2.3:2873742-2873761 None:intergenic 50.0%
GGGAAGAATCCTTGCGTCAT+TGG - chr2.3:2873709-2873728 None:intergenic 50.0%
GGGCTCTCCTAACAACTTCA+AGG - chr2.3:2873938-2873957 None:intergenic 50.0%
GGGTTCATCCTCGTTGTAAC+TGG + chr2.3:2873396-2873415 MS.gene76542:intron 50.0%
GGTCTCCAAAAGCTAGGCAA+AGG + chr2.3:2872807-2872826 MS.gene76542:CDS 50.0%
GGTTGTGAGTTCTCAGAAGG+TGG - chr2.3:2873559-2873578 None:intergenic 50.0%
GTAGCAAAGTAGCAGCCTTC+TGG - chr2.3:2872565-2872584 None:intergenic 50.0%
TCAACCCACGAATCGAACTC+TGG + chr2.3:2871373-2871392 MS.gene76542:intron 50.0%
TCATGCGGCGGTTCAAAACA+AGG - chr2.3:2870473-2870492 None:intergenic 50.0%
TCCGACAGAGTAATGCTACC+AGG + chr2.3:2872910-2872929 MS.gene76542:CDS 50.0%
TGCTCTCACTGCAGCAACAA+CGG + chr2.3:2870278-2870297 MS.gene76542:CDS 50.0%
TTTCGACATGGCTCCTGATG+TGG + chr2.3:2872953-2872972 MS.gene76542:CDS 50.0%
! CGCTAACTGGAGCATTTGCA+TGG - chr2.3:2873978-2873997 None:intergenic 50.0%
! GAGGTTTAGGTTCCCCATAC+TGG - chr2.3:2870405-2870424 None:intergenic 50.0%
! GGGGAAGGACCCTAGTATTT+TGG + chr2.3:2871310-2871329 MS.gene76542:intron 50.0%
!! TCTGAGCATTGGGGAAACAC+AGG + chr2.3:2873885-2873904 MS.gene76542:CDS 50.0%
AATACTAGGGTCCTTCCCCG+GGG - chr2.3:2871309-2871328 None:intergenic 55.0%
ACCAAAAAGCTTCACCCCGC+CGG - chr2.3:2870345-2870364 None:intergenic 55.0%
ACTGGAACGTCTCTTCCTCC+TGG - chr2.3:2872931-2872950 None:intergenic 55.0%
TAGGCAAAGGAGACTGGCGA+GGG + chr2.3:2872820-2872839 MS.gene76542:CDS 55.0%
! CACAAACAACACGGGGGTGT+CGG + chr2.3:2871857-2871876 MS.gene76542:intron 55.0%
! TTTTGAACCGCCGCATGACC+CGG + chr2.3:2870475-2870494 MS.gene76542:CDS 55.0%
CAAGGTGAACCGGGGTTCAG+CGG - chr2.3:2870455-2870474 None:intergenic 60.0%
CTAGGCAAAGGAGACTGGCG+AGG + chr2.3:2872819-2872838 MS.gene76542:CDS 60.0%
TAACCATCCGGGTCATGCGG+CGG - chr2.3:2870485-2870504 None:intergenic 60.0%
TCTTCTTCGCCGCTGAACCC+CGG + chr2.3:2870443-2870462 MS.gene76542:CDS 60.0%
!! AAACAACACGGGGGTGTCGG+TGG + chr2.3:2871860-2871879 MS.gene76542:intron 60.0%
!! ACGGGGGTGTCGGTGGAAAA+CGG + chr2.3:2871867-2871886 MS.gene76542:intron 60.0%
!! CGACACCCCCGTGTTGTTTG+TGG - chr2.3:2871859-2871878 None:intergenic 60.0%
CCGGGGAACCGAGGGGTTAA+CGG - chr2.3:2871292-2871311 None:intergenic 65.0%
CCGTTAACCCCTCGGTTCCC+CGG + chr2.3:2871289-2871308 MS.gene76542:intron 65.0%
CGTTAACCCCTCGGTTCCCC+GGG + chr2.3:2871290-2871309 MS.gene76542:intron 65.0%
GTTAACCCCTCGGTTCCCCG+GGG + chr2.3:2871291-2871310 MS.gene76542:intron 65.0%
! GCCGGCGGGGTGAAGCTTTT+TGG + chr2.3:2870341-2870360 MS.gene76542:CDS 65.0%
AAGCTTCACCCCGCCGGCAG+CGG - chr2.3:2870339-2870358 None:intergenic 70.0%
GAACCGCCGCATGACCCGGA+TGG + chr2.3:2870479-2870498 MS.gene76542:CDS 70.0%
GTCCTTCCCCGGGGAACCGA+GGG - chr2.3:2871300-2871319 None:intergenic 70.0%
TCCTTCCCCGGGGAACCGAG+GGG - chr2.3:2871299-2871318 None:intergenic 70.0%
ACCCCTCGGTTCCCCGGGGA+AGG + chr2.3:2871295-2871314 MS.gene76542:intron 75.0%
GCAGCGGCGGCGCTTCTCGA+CGG - chr2.3:2870323-2870342 None:intergenic 75.0%
GGTCCTTCCCCGGGGAACCG+AGG - chr2.3:2871301-2871320 None:intergenic 75.0%
!! TCGAGAAGCGCCGCCGCTGC+CGG + chr2.3:2870323-2870342 MS.gene76542:CDS 75.0%
! CTTCACCCCGCCGGCAGCGG+CGG - chr2.3:2870336-2870355 None:intergenic 80.0%
!!! AGAAGCGCCGCCGCTGCCGG+CGG + chr2.3:2870326-2870345 MS.gene76542:CDS 80.0%
!! AAGCGCCGCCGCTGCCGGCG+GGG + chr2.3:2870328-2870347 MS.gene76542:CDS 85.0%
!!! GAAGCGCCGCCGCTGCCGGC+GGG + chr2.3:2870327-2870346 MS.gene76542:CDS 85.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 2870266 2874044 2870266 ID=MS.gene76542
chr2.3 mRNA 2870266 2874044 2870266 ID=MS.gene76542.t1;Parent=MS.gene76542
chr2.3 exon 2870266 2870569 2870266 ID=MS.gene76542.t1.exon1;Parent=MS.gene76542.t1
chr2.3 CDS 2870266 2870569 2870266 ID=cds.MS.gene76542.t1;Parent=MS.gene76542.t1
chr2.3 exon 2872766 2872974 2872766 ID=MS.gene76542.t1.exon2;Parent=MS.gene76542.t1
chr2.3 CDS 2872766 2872974 2872766 ID=cds.MS.gene76542.t1;Parent=MS.gene76542.t1
chr2.3 exon 2873514 2874044 2873514 ID=MS.gene76542.t1.exon3;Parent=MS.gene76542.t1
chr2.3 CDS 2873514 2874044 2873514 ID=cds.MS.gene76542.t1;Parent=MS.gene76542.t1
Gene Sequence

>MS.gene76542

ATGACTCGGCGTTGCTCTCACTGCAGCAACAACGGCCATAACTCACGGACATGTCCGTCGAGAAGCGCCGCCGCTGCCGGCGGGGTGAAGCTTTTTGGTGTTAGATTAACCGATGGATCAATCATCAAGAAAAGTGCCAGTATGGGGAACCTAAACCTCGCTGCTCTTCATCATTCTTCTTCTTCGCCGCTGAACCCCGGTTCACCTTGTTTTGAACCGCCGCATGACCCGGATGGTTATTTGTCTGATGACCCGGTTCATGCTTCTTCTGCTTTCGCTACCCGCCGCAGCGAAAGAAAAAAAGGTATTTGTTTTTATTGTTTTTTGAACATAATCATCATGATTATTTGCATTTAATCTTGTTTTTAATTTAAAAATGTTGATAATAACTTGGATTAATTAATTTTTTAATTGCACCAAACGAAAAGTAAAGTTGTTGGAAAACCACACATTATAAGCGTGTTGGATTTGCTTTTTAATTTCTTTGATTGTGAAATCTTAATTGTTTTTTATTTTTTGTACGCAAAACACTTCATAAATGTATATAGTTAAATATGATGATTTTTTTTTTTTTAATTTTATTTTGGAAAAAATGAATTGTTCCTGATATCTGGTGAAAGGTATTTTTGGTTTTGGTTTTTTGGTATCCACGTTTTATTTTATGGAACACATTTTCGTTTGATTGGTCACGAAATGACGGCATTTAATGTTATTAATGTTTATGAGTAATTTGAATAGATATGAAACATTTAATGTCATTATTGTTTCATTGGTTTTGGTTCCGTATGGTACAATCCATGGTACTAGTATTTTGAGAGTTGAGACCATTGGAGTTAATAGGGGTTGAATTTATAGTAGGACACAAGGGAATGTTTACGTTGGTATGGTACGAATTAGGTCCAGTTTGGATAACTTAATTTGCAACTTATAAGTTTGTCATAAACAATTTTCATAATCTATAAACTGTTTTCATAACCTCTCCTGAAGAGCTTATGAAAGTAAGTTGAATTTTTTTTTTTTCTTCCGTTAACCCCTCGGTTCCCCGGGGAAGGACCCTAGTATTTTGGAGTTCGGCCTTGAGGTAAGTATAGCTTGGCGAAGAATTGTTCAACCCACGAATCGAACTCTGGTTTTGTCCTTTGATGAAGTTCATCAACCACTTGAGCCTAATTGTTTGGTTTGTTGAAAACAATTAATGAACATATCATAAGCGGTTTTCAATATGTTCTCCCAAACAAACTCATGTCGGTAAATAAACTCAAATAAGTCAATTCAAACAAACTCTTACTACTCCCCAATTCGTTTTAGTTGTCATTTTAAAGTTATTTACATATACGAAAACAACCATTAAATTTTGTTATTCTTTATGTAATTATATGTCTTTTTCCAATACTTAACTGTATATTATCTTATTCCACTTATTTCTCTGTGCAATAAATAGTGAAGAGTATTATTGAAAAAATAATGTTGTATTGAACTTTGAAAACGGAAAATAGGTATAAATAAAAATTCTTCTACAAAAGTGACAGTTAAAAAAGAATAGAACAGAAGGAGTATATACACCTAGATGTATGATTTTTATGCTTTCTTCCACAAACAACACGGGGGTGTCGGTGGAAAACGGTTTAATATCTGGAATTTATATTGAGGTTTAAGCAATTCACTATAACAAGCAAATCTACTATTTGAAAGTTACTGGTCTCCAGACAAGAGTTTGTTGCTTGATTAACTTGCCTTTCCATGTTTAAATGTACTCAGGTTTTGAGAAATATTATATGTTAAGTACATAAATTATTAAATAGAGTAGTAAACATATTTAATATCTTGCAGATAAAAAAATGTTGAACATCTTCATTATTCTGTTAGAAGAATTACGTGTATTGTTAAGTTTTTATAAAATGTGGCAAACTGCTGTACATATCAGTTGTATTATGATCAGTTTGGCAGCTAAATACTATGTGTAACAGTGGTCTTTTTAAAAAAAACTTAGTGTAACAGGGGTAACTGTTGTGTCTGGCTTTAATACAGGTTGCTGAATCATGTCCCTAGCTTTTTTATCCCCTTGTTAAAGCAGTCATACTCATTTGTTTTGTTAGTTTACTAGAAAAATTAAGGGCTAAATGCCACAAATATTTGTAATTTTTAATTGTCAAATCATTTTGTTACTATTTATATATTTTTTATATTCTACAAGCCATAGTTTAATTTGGTGCCATTTTTTGGGGATTTGTCATTTGCTTGAAAGCTGTGACTTTTGTAACAAGGATATAAGGTTCTAATCCCTTTAATTCATAATCCAGAAGGCTGCTACTTTGCTACTTACCTATTTTATTTAAAGCCTCTCAACTTTGTTTTTCCTTTACCATGTCTTCGAGGAGATTAGTTGCTGCATCGGATTGTTGCATTTTAACAAAGACTGTTGATTCATTAAGCAGGCCGAGCATCCTTTTTTCTTGTTGATTAGATTAGTTTATTTAATTTGTCCTTTTGTATGTTTTAGGTGTTCCATGGACTGAGGAAGAACATAGATTGTTCTTGGTTGGTCTCCAAAAGCTAGGCAAAGGAGACTGGCGAGGGATAGCACGTAATTTTGTTGTGTCAAGGACCCCTACTCAAGTAGCAAGTCATGCACAAAAGTACTTTATCCGACAGAGTAATGCTACCAGGAGGAAGAGACGTTCCAGTCTTTTCGACATGGCTCCTGATGTGGTCAGTATTCATTCATTCATCATTTCTAATTGAGCAATCTTCATGCAGACACATACGTATGTCTGCTACATATATATTGTCTGATAGAGAGTGAAAGTGTCCTCCTATCCTTATTAACACCAGTACACCAGCTTATAAGCAATATATATGTTATCATCACTACCATAACATATTTTTTATCTATGTTTTGAGAAAATACCTTGGTGTGTTTGGCTTGAATCCATATAAACAGAGTACAGTTATAAACTAGACTACTAGAGAAATCTGTTGAGATAGTCTTTCATATTTATCAGAGCATGATGATGCCTTGACTCTGTTGAGTTTCTCAACAATAGTTCTTGCTTCGTAAGACAAAAGATTATTTTTTTTTTAATTATAGTGACACATTTACTGAAGCCTTTATTTGCTAATTACCATAAACGGGTTCATCCTCGTTGTAACTGGATATTGAATTTTTTATTATGAGTTATGTTTGTTGAGTATTATGTAGTCATTTTCCTATCTTATTAACTTTTTTATTTTTTGAAATGATATGTCAGTGTCCAGATTCAACTTCGATGCCAGAAGAGCAAATACTACTTCCACCTTCTGAGAACTCACAACCTTGTAATGGAAAATCACAACCATCACTAAATCTGTCTCTCAAGTCAGAATATGAACCAATGGAAGCTACATCTGAAGAAAATGTAGAAGAGGCCAATGAGACTACAATGGGATCAAATGGATTCACACCAATGACGCAAGGATTCTTCCCACCTTATTTACCTGCCTCATTTTCCATATGGCCATCAATTGGAGCTCCCTTTGAAGAAGTCAACAAAGGAGAGACATCGTATCATCAGGTCCTCAAGCCAATACCAGTCATTCCAAAGGAACCTGTCAATGTTGATGAACTTGTGGGAATGTCTCATCTGAGCATTGGGGAAACACAGGCTCTTGATAGAGAGCCTTCCCCCCTTTCCTTGAAGTTGTTAGGAGAGCCCTCAAGGCAATCAGCATTCCATGCAAATGCTCCAGTTAGCGGTTCTGATCTAAACAGTGGCAAGAACAACGCCATTCAAGCAGTTTGA
Protein sequence

>MS.gene76542.t1

MTRRCSHCSNNGHNSRTCPSRSAAAAGGVKLFGVRLTDGSIIKKSASMGNLNLAALHHSSSSPLNPGSPCFEPPHDPDGYLSDDPVHASSAFATRRSERKKGVPWTEEEHRLFLVGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMAPDVCPDSTSMPEEQILLPPSENSQPCNGKSQPSLNLSLKSEYEPMEATSEENVEEANETTMGSNGFTPMTQGFFPPYLPASFSIWPSIGAPFEEVNKGETSYHQVLKPIPVIPKEPVNVDELVGMSHLSIGETQALDREPSPLSLKLLGEPSRQSAFHANAPVSGSDLNSGKNNAIQAV