AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76569

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76569.t1 MTR_2g100490 93.233 399 20 1 1 399 1 392 0.0 721
MS.gene76569.t1 MTR_8g015450 51.957 460 107 22 1 388 1 418 4.25e-109 327
MS.gene76569.t1 MTR_3g101810 52.679 112 52 1 268 379 143 253 2.67e-35 131
MS.gene76569.t1 MTR_8g093500 63.043 92 33 1 269 360 87 177 4.75e-34 128
MS.gene76569.t1 MTR_5g017210 61.682 107 39 2 258 363 98 203 1.58e-28 112
MS.gene76569.t1 MTR_7g069590 52.941 68 32 0 303 370 32 99 5.11e-20 86.3
MS.gene76569.t1 MTR_1g018090 62.963 54 20 0 306 359 283 336 4.47e-17 82.4
MS.gene76569.t1 MTR_5g079500 58.929 56 23 0 304 359 225 280 2.02e-16 79.7
MS.gene76569.t1 MTR_1g106460 49.254 67 34 0 293 359 234 300 3.69e-16 79.3
MS.gene76569.t1 MTR_5g005110 55.357 56 25 0 304 359 231 286 1.31e-15 77.8
MS.gene76569.t1 MTR_1g106470 55.357 56 25 0 304 359 203 258 2.22e-15 76.3
MS.gene76569.t1 MTR_3g103030 50.794 63 31 0 297 359 229 291 5.83e-15 75.5
MS.gene76569.t1 MTR_2g067000 58.491 53 22 0 308 360 168 220 6.55e-14 72.4
MS.gene76569.t1 MTR_1g060700 59.259 54 22 0 307 360 357 410 8.42e-14 73.2
MS.gene76569.t1 MTR_4g131160 55.357 56 25 0 304 359 203 258 1.22e-13 72.4
MS.gene76569.t1 MTR_4g131160 55.357 56 25 0 304 359 206 261 1.27e-13 72.4
MS.gene76569.t1 MTR_1g080890 55.357 56 25 0 304 359 200 255 3.22e-13 70.9
MS.gene76569.t1 MTR_1g106480 52.941 51 24 0 309 359 81 131 6.42e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76569.t1 AT3G21330 56.507 292 111 10 105 391 86 366 3.25e-87 269
MS.gene76569.t1 AT4G00120 61.798 89 33 1 272 360 88 175 9.33e-30 114
MS.gene76569.t1 AT3G50330 52.941 136 60 4 227 360 49 182 3.90e-26 105
MS.gene76569.t1 AT5G67060 64.130 92 32 1 269 360 83 173 6.24e-26 105
MS.gene76569.t1 AT5G67060 64.130 92 32 1 269 360 95 185 7.17e-26 105
MS.gene76569.t1 AT5G09750 62.366 93 34 1 269 361 92 183 3.11e-24 100
MS.gene76569.t1 AT5G01305 47.872 94 46 1 295 385 35 128 6.36e-22 92.4
MS.gene76569.t1 AT1G66470 39.450 109 64 1 251 359 151 257 2.95e-17 82.0
MS.gene76569.t1 AT5G37800 46.067 89 40 1 279 359 175 263 4.56e-17 81.6
MS.gene76569.t1 AT5G43175 46.269 67 36 0 293 359 128 194 1.93e-16 78.2
MS.gene76569.t1 AT4G33880 53.226 62 29 0 298 359 267 328 2.76e-16 80.1
MS.gene76569.t1 AT2G14760 53.226 62 29 0 298 359 238 299 4.36e-16 79.0
MS.gene76569.t1 AT1G27740 50.000 62 31 0 298 359 168 229 4.22e-15 75.1
MS.gene76569.t1 AT4G30980 54.545 66 29 1 295 359 127 192 6.43e-15 75.5
MS.gene76569.t1 AT4G30980 54.545 66 29 1 295 359 175 240 8.95e-15 75.5
MS.gene76569.t1 AT2G24260 57.143 56 24 0 304 359 42 97 1.02e-14 73.9
MS.gene76569.t1 AT2G24260 57.143 56 24 0 304 359 145 200 1.91e-14 74.3
MS.gene76569.t1 AT5G58010 49.275 69 34 1 292 359 93 161 3.67e-13 70.1
MS.gene76569.t1 AT2G14760 44.000 75 29 1 298 359 238 312 6.36e-13 69.7

Find 84 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCTTCTTCTACTGAATT+TGG 0.150846 2.3:+3204546 MS.gene76569:CDS
CATCTTGGTTTCTTTGACTT+TGG 0.197671 2.3:-3204594 None:intergenic
ATTTAGGCCGGTGACGAATT+TGG 0.200299 2.3:+3204755 MS.gene76569:CDS
GATTTCAATCATGGGAATAT+TGG 0.228711 2.3:-3205094 None:intergenic
GACAATGAAACTGATGAATT+TGG 0.244336 2.3:-3204660 None:intergenic
AATATTGGATGTTGACATTA+GGG 0.282359 2.3:-3205079 None:intergenic
CCAAGGTTCATTCCACAAAA+AGG 0.291280 2.3:+3204475 MS.gene76569:CDS
AAGGAGAAGGCTATGTTTGT+AGG 0.304724 2.3:-3205032 None:intergenic
TCCCAACTGTTTCCAGCTCC+TGG 0.305187 2.3:-3204069 None:intergenic
TTCATTTGTGCTATTGCCTC+TGG 0.321358 2.3:-3204708 None:intergenic
GAATATTGGATGTTGACATT+AGG 0.325949 2.3:-3205080 None:intergenic
TTTAGGCCGGTGACGAATTT+GGG 0.332170 2.3:+3204756 MS.gene76569:CDS
AAGTGATGGAAAAGCCTAAA+AGG 0.336703 2.3:+3204784 MS.gene76569:CDS
TGCCTAGCCGCCACAGTTTG+TGG 0.350175 2.3:-3204831 None:intergenic
CTTGGTTTCTTTGACTTTGG+TGG 0.356806 2.3:-3204591 None:intergenic
GATGATAATGATTTCAATCA+TGG 0.362071 2.3:-3205103 None:intergenic
TGTGCTATTGCCTCTGGATC+AGG 0.366599 2.3:-3204702 None:intergenic
TATATAGAGCTGCAGCATTT+AGG 0.373879 2.3:+3204739 MS.gene76569:CDS
CCAATCATACCCTTCACTTT+CGG 0.383334 2.3:+3204107 MS.gene76569:CDS
TACATATGGATTGTCTTAGC+TGG 0.402802 2.3:+3203908 None:intergenic
AAACTGATGAATTTGGTTGC+TGG 0.410865 2.3:-3204653 None:intergenic
AACTTTAGTGCAGTTTCCTC+TGG 0.411517 2.3:+3204339 MS.gene76569:CDS
GCCGGTGACGAATTTGGGTT+TGG 0.412280 2.3:+3204761 MS.gene76569:CDS
GTCTTGCAGAAGATTGTTCC+TGG 0.420469 2.3:+3204885 MS.gene76569:CDS
TGCATTCAAGGAACTGGATC+AGG 0.432172 2.3:+3204404 MS.gene76569:CDS
CCGAAAGTGAAGGGTATGAT+TGG 0.436711 2.3:-3204107 None:intergenic
GCAGTATGCATTCAAGGAAC+TGG 0.437343 2.3:+3204398 MS.gene76569:CDS
ACTAATTCTGTTCAAGATGA+TGG 0.443976 2.3:+3204273 MS.gene76569:CDS
CATTGATGCAGTGTCCATCT+TGG 0.445318 2.3:-3204913 None:intergenic
TACTCTTGCTGATTGGTTGG+TGG 0.446984 2.3:-3204182 None:intergenic
CTGTGGCGGCTAGGCAAAGA+AGG 0.454660 2.3:+3204838 MS.gene76569:CDS
CATGGGAATCGATGGGTTGA+AGG 0.461459 2.3:-3205051 None:intergenic
GGACACTTATTATCCCATCT+TGG 0.463511 2.3:-3204609 None:intergenic
TTACCTTGATCTGAGGAAGC+TGG 0.471387 2.3:-3204438 None:intergenic
GTAGTAGTACTCTTGCTGAT+TGG 0.471486 2.3:-3204189 None:intergenic
GTCAAAGCACTGGAGAATCT+AGG 0.474273 2.3:+3204978 MS.gene76569:CDS
GGTTGAGTGTTCCACAAGAT+TGG 0.479415 2.3:-3203961 None:intergenic
GGACATGCAGTATGCATTCA+AGG 0.489351 2.3:+3204392 MS.gene76569:CDS
TGGTGGGCCATGTTGAAATC+AGG 0.494073 2.3:-3204165 None:intergenic
CAGAAGGTTCAACCAGGAGC+TGG 0.494279 2.3:+3204057 MS.gene76569:CDS
ACTCTTGCTGATTGGTTGGT+GGG 0.498014 2.3:-3204181 None:intergenic
GTTCCACAAGATTGGTATGT+TGG 0.503170 2.3:-3203953 None:intergenic
ACCAGGAGCTGGAAACAGTT+GGG 0.515648 2.3:+3204068 MS.gene76569:CDS
TAGTACTCTTGCTGATTGGT+TGG 0.516116 2.3:-3204185 None:intergenic
ACATATGGATTGTCTTAGCT+GGG 0.522229 2.3:+3203909 None:intergenic
GAATTTGGGTTTGGAAGTGA+TGG 0.527963 2.3:+3204770 MS.gene76569:CDS
TCTCCAGCTTCCTCAGATCA+AGG 0.534533 2.3:+3204435 MS.gene76569:CDS
TTACCAACATACCAATCTTG+TGG 0.535200 2.3:+3203950 MS.gene76569:CDS
AACCAGGAGCTGGAAACAGT+TGG 0.539885 2.3:+3204067 MS.gene76569:CDS
AGAGGCAATAGCACAAATGA+AGG 0.541238 2.3:+3204710 MS.gene76569:CDS
AAGAAACTTGAGGTAATTAG+CGG 0.544653 2.3:-3204946 None:intergenic
CTCTGGATCAGGCTCTTCAA+AGG 0.548876 2.3:-3204691 None:intergenic
ATGATAATGATTTCAATCAT+GGG 0.556089 2.3:-3205102 None:intergenic
AGATGGGATAATAAGTGTCC+TGG 0.557228 2.3:+3204612 MS.gene76569:CDS
GTGTCCATCTTGGTTCCACC+AGG 0.564056 2.3:-3204903 None:intergenic
TAAAATCATTGATAATTCCA+AGG 0.564539 2.3:+3204458 MS.gene76569:CDS
TAGTCTCTTGCAAAGTCTTG+TGG 0.568681 2.3:-3203982 None:intergenic
TGTTCCTGGTGGAACCAAGA+TGG 0.571863 2.3:+3204899 MS.gene76569:CDS
TCGATATTGACCGAAAGTGA+AGG 0.573714 2.3:-3204117 None:intergenic
TAGAGCACAAGTCAAAGCAC+TGG 0.576476 2.3:+3204968 MS.gene76569:CDS
GAAGGGAAAGAATAAGTGAG+AGG 0.579170 2.3:+3204856 MS.gene76569:CDS
TCCAAACCCAAATTCGTCAC+CGG 0.582453 2.3:-3204762 None:intergenic
ATCCACAAACTGTGGCGGCT+AGG 0.587768 2.3:+3204829 MS.gene76569:CDS
AATCGATGGGTTGAAGGAGA+AGG 0.590674 2.3:-3205045 None:intergenic
CAAAGTCAAAGAAACCAAGA+TGG 0.591227 2.3:+3204595 MS.gene76569:CDS
GTCAGTGTTACTGTTAGTAG+TGG 0.594081 2.3:-3204250 None:intergenic
CGATATTGACCGAAAGTGAA+GGG 0.597835 2.3:-3204116 None:intergenic
TAGAGCTGCAGCATTTAGGC+CGG 0.600006 2.3:+3204743 MS.gene76569:CDS
AAAGTCAAAGAAACCAAGAT+GGG 0.607623 2.3:+3204596 MS.gene76569:CDS
CTTTGAAGAGCCTGATCCAG+AGG 0.622335 2.3:+3204692 MS.gene76569:CDS
GCCATGTTGAAATCAGGCAG+TGG 0.628594 2.3:-3204159 None:intergenic
TGAGTAGTAATGCTGAAGCA+AGG 0.639766 2.3:-3204519 None:intergenic
TCAAATGCAAGAAATGCAGA+AGG 0.642036 2.3:+3204041 MS.gene76569:CDS
AAATTGATATTTGATGAACC+AGG 0.643576 2.3:-3204630 None:intergenic
TTGCAGAAGATTGTTCCTGG+TGG 0.647074 2.3:+3204888 MS.gene76569:CDS
ATCAAATGATCCACAAACTG+TGG 0.655439 2.3:+3204821 MS.gene76569:CDS
GAAATGCAGAAGGTTCAACC+AGG 0.659735 2.3:+3204051 MS.gene76569:CDS
GCGTACAAATGCTAGAAACA+AGG 0.665015 2.3:+3204371 MS.gene76569:CDS
AAATGATCCACAAACTGTGG+CGG 0.666151 2.3:+3204824 MS.gene76569:CDS
TGTGGCGGCTAGGCAAAGAA+GGG 0.669512 2.3:+3204839 MS.gene76569:CDS
GCCACTGCCTGATTTCAACA+TGG 0.684690 2.3:+3204158 MS.gene76569:CDS
CTTGTGCTCTAAGAAACTTG+AGG 0.702293 2.3:-3204956 None:intergenic
AGTGGCACATAATTGTCATG+TGG 0.718463 2.3:-3204141 None:intergenic
TGTACGCTCAGATTCACCAG+AGG 0.725761 2.3:-3204355 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATCATTGATAATTCCA+AGG + chr2.3:3204458-3204477 MS.gene76569:CDS 20.0%
! AAATTGATATTTGATGAACC+AGG - chr2.3:3204633-3204652 None:intergenic 25.0%
! AATATTGGATGTTGACATTA+GGG - chr2.3:3205082-3205101 None:intergenic 25.0%
! AGTTAAAAACACTTGAACTT+GGG - chr2.3:3204020-3204039 None:intergenic 25.0%
! TAGTTAAAAACACTTGAACT+TGG - chr2.3:3204021-3204040 None:intergenic 25.0%
!! ATCAATATTAGTCCTTTTTG+TGG - chr2.3:3204490-3204509 None:intergenic 25.0%
!! ATCTTAACATTCTTCCTTTT+AGG - chr2.3:3204801-3204820 None:intergenic 25.0%
AAAGTCAAAGAAACCAAGAT+GGG + chr2.3:3204596-3204615 MS.gene76569:CDS 30.0%
AAGAAACTTGAGGTAATTAG+CGG - chr2.3:3204949-3204968 None:intergenic 30.0%
ACTAATTCTGTTCAAGATGA+TGG + chr2.3:3204273-3204292 MS.gene76569:CDS 30.0%
ACTGCAAAAACAGAAACTTA+TGG + chr2.3:3204316-3204335 MS.gene76569:CDS 30.0%
GAATATTGGATGTTGACATT+AGG - chr2.3:3205083-3205102 None:intergenic 30.0%
GACAATGAAACTGATGAATT+TGG - chr2.3:3204663-3204682 None:intergenic 30.0%
TCTTCTTCTTCTACTGAATT+TGG + chr2.3:3204546-3204565 MS.gene76569:CDS 30.0%
TTTGCAGTCAGAAAAAATCA+TGG - chr2.3:3204304-3204323 None:intergenic 30.0%
! AATGATTTTACCTTGATCTG+AGG - chr2.3:3204448-3204467 None:intergenic 30.0%
AAAAACACTTGAACTTGGGT+TGG - chr2.3:3204016-3204035 None:intergenic 35.0%
AAACTGATGAATTTGGTTGC+TGG - chr2.3:3204656-3204675 None:intergenic 35.0%
ATCAAATGATCCACAAACTG+TGG + chr2.3:3204821-3204840 MS.gene76569:CDS 35.0%
CAAAGTCAAAGAAACCAAGA+TGG + chr2.3:3204595-3204614 MS.gene76569:CDS 35.0%
TATATAGAGCTGCAGCATTT+AGG + chr2.3:3204739-3204758 MS.gene76569:CDS 35.0%
TCAAATGCAAGAAATGCAGA+AGG + chr2.3:3204041-3204060 MS.gene76569:CDS 35.0%
TTACCAACATACCAATCTTG+TGG + chr2.3:3203950-3203969 MS.gene76569:CDS 35.0%
! AAGTGATGGAAAAGCCTAAA+AGG + chr2.3:3204784-3204803 MS.gene76569:CDS 35.0%
! CATCTTGGTTTCTTTGACTT+TGG - chr2.3:3204597-3204616 None:intergenic 35.0%
! TTGACATTAGGGTTTTGCAT+GGG - chr2.3:3205071-3205090 None:intergenic 35.0%
AAATGATCCACAAACTGTGG+CGG + chr2.3:3204824-3204843 MS.gene76569:CDS 40.0%
AACTTTAGTGCAGTTTCCTC+TGG + chr2.3:3204339-3204358 MS.gene76569:CDS 40.0%
AAGGAGAAGGCTATGTTTGT+AGG - chr2.3:3205035-3205054 None:intergenic 40.0%
AGAGGCAATAGCACAAATGA+AGG + chr2.3:3204710-3204729 MS.gene76569:CDS 40.0%
AGATGGGATAATAAGTGTCC+TGG + chr2.3:3204612-3204631 MS.gene76569:CDS 40.0%
AGTGGCACATAATTGTCATG+TGG - chr2.3:3204144-3204163 None:intergenic 40.0%
CCAAGGTTCATTCCACAAAA+AGG + chr2.3:3204475-3204494 MS.gene76569:CDS 40.0%
CCAATCATACCCTTCACTTT+CGG + chr2.3:3204107-3204126 MS.gene76569:CDS 40.0%
CGATATTGACCGAAAGTGAA+GGG - chr2.3:3204119-3204138 None:intergenic 40.0%
GAAGGGAAAGAATAAGTGAG+AGG + chr2.3:3204856-3204875 MS.gene76569:CDS 40.0%
GCGTACAAATGCTAGAAACA+AGG + chr2.3:3204371-3204390 MS.gene76569:CDS 40.0%
GGACACTTATTATCCCATCT+TGG - chr2.3:3204612-3204631 None:intergenic 40.0%
GTAGTAGTACTCTTGCTGAT+TGG - chr2.3:3204192-3204211 None:intergenic 40.0%
GTTCCACAAGATTGGTATGT+TGG - chr2.3:3203956-3203975 None:intergenic 40.0%
TAGTCTCTTGCAAAGTCTTG+TGG - chr2.3:3203985-3204004 None:intergenic 40.0%
TCGATATTGACCGAAAGTGA+AGG - chr2.3:3204120-3204139 None:intergenic 40.0%
TGAGTAGTAATGCTGAAGCA+AGG - chr2.3:3204522-3204541 None:intergenic 40.0%
! CCTTTTTGTGGAATGAACCT+TGG - chr2.3:3204478-3204497 None:intergenic 40.0%
! CTTGGTTTCTTTGACTTTGG+TGG - chr2.3:3204594-3204613 None:intergenic 40.0%
! GAATTTGGGTTTGGAAGTGA+TGG + chr2.3:3204770-3204789 MS.gene76569:CDS 40.0%
! GTCAGTGTTACTGTTAGTAG+TGG - chr2.3:3204253-3204272 None:intergenic 40.0%
! GTTGACATTAGGGTTTTGCA+TGG - chr2.3:3205072-3205091 None:intergenic 40.0%
! TAGTACTCTTGCTGATTGGT+TGG - chr2.3:3204188-3204207 None:intergenic 40.0%
! TTCATTTGTGCTATTGCCTC+TGG - chr2.3:3204711-3204730 None:intergenic 40.0%
!! CTTGTGCTCTAAGAAACTTG+AGG - chr2.3:3204959-3204978 None:intergenic 40.0%
ATTTAGGCCGGTGACGAATT+TGG + chr2.3:3204755-3204774 MS.gene76569:CDS 45.0%
CATTGATGCAGTGTCCATCT+TGG - chr2.3:3204916-3204935 None:intergenic 45.0%
GAAATGCAGAAGGTTCAACC+AGG + chr2.3:3204051-3204070 MS.gene76569:CDS 45.0%
GCAGTATGCATTCAAGGAAC+TGG + chr2.3:3204398-3204417 MS.gene76569:CDS 45.0%
GGACATGCAGTATGCATTCA+AGG + chr2.3:3204392-3204411 MS.gene76569:CDS 45.0%
GGTTGAGTGTTCCACAAGAT+TGG - chr2.3:3203964-3203983 None:intergenic 45.0%
GTCTTGCAGAAGATTGTTCC+TGG + chr2.3:3204885-3204904 MS.gene76569:CDS 45.0%
TAGAGCACAAGTCAAAGCAC+TGG + chr2.3:3204968-3204987 MS.gene76569:CDS 45.0%
TCCAAACCCAAATTCGTCAC+CGG - chr2.3:3204765-3204784 None:intergenic 45.0%
TGCATTCAAGGAACTGGATC+AGG + chr2.3:3204404-3204423 MS.gene76569:CDS 45.0%
TTACCTTGATCTGAGGAAGC+TGG - chr2.3:3204441-3204460 None:intergenic 45.0%
TTGCAGAAGATTGTTCCTGG+TGG + chr2.3:3204888-3204907 MS.gene76569:CDS 45.0%
TTTAGGCCGGTGACGAATTT+GGG + chr2.3:3204756-3204775 MS.gene76569:CDS 45.0%
! ACTCTTGCTGATTGGTTGGT+GGG - chr2.3:3204184-3204203 None:intergenic 45.0%
! CCGAAAGTGAAGGGTATGAT+TGG - chr2.3:3204110-3204129 None:intergenic 45.0%
! GGTTTTGCATGGGAATCGAT+GGG - chr2.3:3205061-3205080 None:intergenic 45.0%
! TACTCTTGCTGATTGGTTGG+TGG - chr2.3:3204185-3204204 None:intergenic 45.0%
!! AATCGATGGGTTGAAGGAGA+AGG - chr2.3:3205048-3205067 None:intergenic 45.0%
!! GTCAAAGCACTGGAGAATCT+AGG + chr2.3:3204978-3204997 MS.gene76569:CDS 45.0%
AACCAGGAGCTGGAAACAGT+TGG + chr2.3:3204067-3204086 MS.gene76569:CDS 50.0%
ACCAGGAGCTGGAAACAGTT+GGG + chr2.3:3204068-3204087 MS.gene76569:CDS 50.0%
CTCTGGATCAGGCTCTTCAA+AGG - chr2.3:3204694-3204713 None:intergenic 50.0%
GCCACTGCCTGATTTCAACA+TGG + chr2.3:3204158-3204177 MS.gene76569:CDS 50.0%
GCCATGTTGAAATCAGGCAG+TGG - chr2.3:3204162-3204181 None:intergenic 50.0%
TAGAGCTGCAGCATTTAGGC+CGG + chr2.3:3204743-3204762 MS.gene76569:CDS 50.0%
TCTCCAGCTTCCTCAGATCA+AGG + chr2.3:3204435-3204454 MS.gene76569:CDS 50.0%
TGTACGCTCAGATTCACCAG+AGG - chr2.3:3204358-3204377 None:intergenic 50.0%
TGTTCCTGGTGGAACCAAGA+TGG + chr2.3:3204899-3204918 MS.gene76569:CDS 50.0%
! CTTTGAAGAGCCTGATCCAG+AGG + chr2.3:3204692-3204711 MS.gene76569:CDS 50.0%
! GGGTTTTGCATGGGAATCGA+TGG - chr2.3:3205062-3205081 None:intergenic 50.0%
! TGGTGGGCCATGTTGAAATC+AGG - chr2.3:3204168-3204187 None:intergenic 50.0%
! TGTGCTATTGCCTCTGGATC+AGG - chr2.3:3204705-3204724 None:intergenic 50.0%
!! CATGGGAATCGATGGGTTGA+AGG - chr2.3:3205054-3205073 None:intergenic 50.0%
ATCCACAAACTGTGGCGGCT+AGG + chr2.3:3204829-3204848 MS.gene76569:CDS 55.0%
CAGAAGGTTCAACCAGGAGC+TGG + chr2.3:3204057-3204076 MS.gene76569:CDS 55.0%
GTGTCCATCTTGGTTCCACC+AGG - chr2.3:3204906-3204925 None:intergenic 55.0%
TCCCAACTGTTTCCAGCTCC+TGG - chr2.3:3204072-3204091 None:intergenic 55.0%
TGTGGCGGCTAGGCAAAGAA+GGG + chr2.3:3204839-3204858 MS.gene76569:CDS 55.0%
! GCCGGTGACGAATTTGGGTT+TGG + chr2.3:3204761-3204780 MS.gene76569:CDS 55.0%
CTGTGGCGGCTAGGCAAAGA+AGG + chr2.3:3204838-3204857 MS.gene76569:CDS 60.0%
TGCCTAGCCGCCACAGTTTG+TGG - chr2.3:3204834-3204853 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 3203913 3205112 3203913 ID=MS.gene76569
chr2.3 mRNA 3203913 3205112 3203913 ID=MS.gene76569.t1;Parent=MS.gene76569
chr2.3 exon 3203913 3205112 3203913 ID=MS.gene76569.t1.exon1;Parent=MS.gene76569.t1
chr2.3 CDS 3203913 3205112 3203913 ID=cds.MS.gene76569.t1;Parent=MS.gene76569.t1
Gene Sequence

>MS.gene76569

ATGGATTGTCTTAGCTGGGATGATGATACACAACTTGTTACCAACATACCAATCTTGTGGAACACTCAACCACAAGACTTTGCAAGAGACTATTCAATGTCCAACCCAAGTTCAAGTGTTTTTAACTATCAAATGCAAGAAATGCAGAAGGTTCAACCAGGAGCTGGAAACAGTTGGGAAGAAACTTTAATATTCCAATCATACCCTTCACTTTCGGTCAATATCGATCCACATGACAATTATGTGCCACTGCCTGATTTCAACATGGCCCACCAACCAATCAGCAAGAGTACTACTACATGCTCACTTGAATCATCACTTGATTGTTTGCTTTCAGCCACTACTAACAGTAACACTGACACTAATTCTGTTCAAGATGATGGAATTTCCATGATTTTTTCTGACTGCAAAAACAGAAACTTATGGAACTTTAGTGCAGTTTCCTCTGGTGAATCTGAGCGTACAAATGCTAGAAACAAGGACATGCAGTATGCATTCAAGGAACTGGATCAGGAAACAGTATCTCCAGCTTCCTCAGATCAAGGTAAAATCATTGATAATTCCAAGGTTCATTCCACAAAAAGGACTAATATTGATCAATATGATCCTTGCTTCAGCATTACTACTCAGAATTCTTCTTCTTCTACTGAATTTGGTTTCAAGCTTATCTCAGAGAAACCACCAAAGTCAAAGAAACCAAGATGGGATAATAAGTGTCCTGGTTCATCAAATATCAATTTCCAGCAACCAAATTCATCAGTTTCATTGTCAAATTCATCCTTTGAAGAGCCTGATCCAGAGGCAATAGCACAAATGAAGGAAATGATATATAGAGCTGCAGCATTTAGGCCGGTGACGAATTTGGGTTTGGAAGTGATGGAAAAGCCTAAAAGGAAGAATGTTAAGATATCAAATGATCCACAAACTGTGGCGGCTAGGCAAAGAAGGGAAAGAATAAGTGAGAGGATTAGAGTCTTGCAGAAGATTGTTCCTGGTGGAACCAAGATGGACACTGCATCAATGCTTGATGAAGCCGCTAATTACCTCAAGTTTCTTAGAGCACAAGTCAAAGCACTGGAGAATCTAGGAAACAAGATTGATACAATGAATAATTGTTCTCCTACAAACATAGCCTTCTCCTTCAACCCATCGATTCCCATGCAAAACCCTAATGTCAACATCCAATATTCCCATGATTGA
Protein sequence

>MS.gene76569.t1

MDCLSWDDDTQLVTNIPILWNTQPQDFARDYSMSNPSSSVFNYQMQEMQKVQPGAGNSWEETLIFQSYPSLSVNIDPHDNYVPLPDFNMAHQPISKSTTTCSLESSLDCLLSATTNSNTDTNSVQDDGISMIFSDCKNRNLWNFSAVSSGESERTNARNKDMQYAFKELDQETVSPASSDQGKIIDNSKVHSTKRTNIDQYDPCFSITTQNSSSSTEFGFKLISEKPPKSKKPRWDNKCPGSSNINFQQPNSSVSLSNSSFEEPDPEAIAQMKEMIYRAAAFRPVTNLGLEVMEKPKRKNVKISNDPQTVAARQRRERISERIRVLQKIVPGGTKMDTASMLDEAANYLKFLRAQVKALENLGNKIDTMNNCSPTNIAFSFNPSIPMQNPNVNIQYSHD