AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76589

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76589.t1 MTR_5g040880 89.354 526 54 2 1 526 1 524 0.0 952
MS.gene76589.t1 MTR_2g024430 59.309 521 192 8 1 516 9 514 0.0 573
MS.gene76589.t1 MTR_5g082140 53.592 515 176 7 1 510 1 457 2.19e-175 502
MS.gene76589.t1 MTR_5g040740 77.287 317 66 3 1 313 1 315 2.15e-174 498
MS.gene76589.t1 MTR_5g040740 60.000 55 21 1 464 517 352 406 8.53e-11 64.3
MS.gene76589.t1 MTR_5g061220 49.548 553 212 10 1 518 8 528 2.77e-163 474
MS.gene76589.t1 MTR_2g006270 46.628 519 195 11 4 514 5 449 1.02e-132 393
MS.gene76589.t1 MTR_3g073420 41.115 574 264 13 2 521 9 562 1.28e-123 375
MS.gene76589.t1 MTR_2g006380 41.440 514 216 15 6 513 14 448 4.95e-112 340
MS.gene76589.t1 MTR_1g058210 50.685 365 163 9 1 354 1 359 2.37e-110 336
MS.gene76589.t1 MTR_1g058210 48.718 78 40 0 426 503 359 436 6.51e-13 71.2
MS.gene76589.t1 MTR_5g060630 40.971 515 230 13 1 448 1 508 4.18e-103 320
MS.gene76589.t1 MTR_5g460740 40.971 515 230 13 1 448 1 508 4.18e-103 320
MS.gene76589.t1 MTR_5g060780 47.989 348 152 9 1 332 1 335 1.22e-98 304
MS.gene76589.t1 MTR_5g460920 47.989 348 152 9 1 332 1 335 3.89e-98 303
MS.gene76589.t1 MTR_5g061890 48.276 348 151 9 1 332 1 335 2.02e-97 301
MS.gene76589.t1 MTR_2g094570 35.870 552 254 16 9 494 8 525 2.76e-90 290
MS.gene76589.t1 MTR_2g094570 35.870 552 254 16 9 494 8 525 4.47e-90 291
MS.gene76589.t1 MTR_2g094570 35.870 552 254 16 9 494 64 581 1.97e-89 290
MS.gene76589.t1 MTR_4g058930 37.083 480 207 12 1 414 1 451 2.54e-87 283
MS.gene76589.t1 MTR_4g058930 37.083 480 207 12 1 414 1 451 2.90e-87 283
MS.gene76589.t1 MTR_1g064430 39.518 415 180 9 2 353 16 422 3.71e-83 272
MS.gene76589.t1 MTR_1g064430 39.518 415 180 9 2 353 29 435 6.34e-83 272
MS.gene76589.t1 MTR_1g094960 38.557 402 174 9 9 351 16 403 1.19e-79 261
MS.gene76589.t1 MTR_7g101280 32.920 565 264 17 9 495 28 555 1.50e-74 248
MS.gene76589.t1 MTR_0041s0110 32.920 565 264 17 9 495 28 555 1.50e-74 248
MS.gene76589.t1 MTR_5g062970 52.284 197 90 2 9 204 35 228 4.04e-65 211
MS.gene76589.t1 MTR_7g101275 39.241 316 161 9 22 317 2 306 2.08e-63 213
MS.gene76589.t1 MTR_4g021580 33.854 384 201 9 12 359 19 385 1.02e-59 208
MS.gene76589.t1 MTR_4g021580 33.854 384 201 9 12 359 19 385 1.63e-59 208
MS.gene76589.t1 MTR_2g014770 34.493 345 192 8 12 332 53 387 4.85e-59 206
MS.gene76589.t1 MTR_2g014770 34.203 345 193 8 12 332 53 387 1.01e-58 206
MS.gene76589.t1 MTR_4g088210 34.091 352 188 9 12 332 38 376 3.43e-58 205
MS.gene76589.t1 MTR_4g088210 34.091 352 188 9 12 332 38 376 4.07e-58 205
MS.gene76589.t1 MTR_2g005240 36.034 358 206 8 12 353 23 373 4.85e-58 204
MS.gene76589.t1 MTR_8g027440 35.659 387 209 12 2 360 14 388 1.94e-57 203
MS.gene76589.t1 MTR_7g062540 34.375 352 205 8 1 334 3 346 2.56e-57 202
MS.gene76589.t1 MTR_2g093740 35.657 373 196 14 12 352 56 416 7.85e-57 201
MS.gene76589.t1 MTR_2g018690 34.545 385 215 12 9 368 20 392 1.09e-56 204
MS.gene76589.t1 MTR_2g093740 35.657 373 196 14 12 352 56 416 2.19e-56 201
MS.gene76589.t1 MTR_2g093740 35.657 373 196 14 12 352 56 416 4.05e-56 201
MS.gene76589.t1 MTR_0041s0120 36.890 328 164 9 22 317 2 318 4.64e-56 193
MS.gene76589.t1 MTR_5g076270 33.509 379 219 11 12 367 24 392 4.94e-55 198
MS.gene76589.t1 MTR_8g100050 34.254 362 212 8 12 354 59 413 5.32e-55 197
MS.gene76589.t1 MTR_8g079492 33.862 378 226 10 9 368 20 391 6.39e-55 199
MS.gene76589.t1 MTR_8g100050 34.254 362 212 8 12 354 59 413 1.91e-54 197
MS.gene76589.t1 MTR_8g079492 34.349 361 213 10 9 351 20 374 5.10e-54 196
MS.gene76589.t1 MTR_1g024025 35.083 362 199 11 12 349 43 392 5.60e-54 197
MS.gene76589.t1 MTR_2g043250 34.085 355 200 7 9 340 20 363 1.59e-53 196
MS.gene76589.t1 MTR_2g093740 34.456 386 196 15 12 352 56 429 2.65e-53 192
MS.gene76589.t1 MTR_3g064050 33.161 386 211 12 12 367 26 394 3.01e-53 193
MS.gene76589.t1 MTR_4g124900 34.000 350 211 6 9 342 20 365 5.36e-53 194
MS.gene76589.t1 MTR_2g093740 34.456 386 196 15 12 352 56 429 5.60e-53 192
MS.gene76589.t1 MTR_4g124900 34.000 350 211 6 9 342 20 365 6.36e-53 194
MS.gene76589.t1 MTR_2g093740 34.456 386 196 15 12 352 56 429 1.11e-52 192
MS.gene76589.t1 MTR_8g101360 35.311 354 189 10 9 335 28 368 1.31e-51 190
MS.gene76589.t1 MTR_4g060460 34.294 347 198 10 12 332 54 396 2.23e-49 182
MS.gene76589.t1 MTR_4g060460 34.294 347 198 11 12 332 54 396 2.30e-49 182
MS.gene76589.t1 MTR_5g060770 34.530 362 174 12 63 417 9 314 5.15e-44 159
MS.gene76589.t1 MTR_8g079492 34.185 313 184 9 72 368 3 309 3.66e-43 164
MS.gene76589.t1 MTR_2g093740 35.842 279 151 12 95 352 15 286 2.25e-41 157
MS.gene76589.t1 MTR_2g093740 35.842 279 151 12 95 352 15 286 3.54e-41 157
MS.gene76589.t1 MTR_2g093740 34.247 292 151 13 95 352 15 299 5.19e-38 148
MS.gene76589.t1 MTR_2g093740 34.247 292 151 13 95 352 15 299 7.03e-38 148
MS.gene76589.t1 MTR_5g062960 41.860 215 84 8 231 439 2 181 1.88e-34 129
MS.gene76589.t1 MTR_8g446900 28.374 289 182 8 61 334 12 290 3.04e-32 127
MS.gene76589.t1 MTR_5g460910 29.867 375 177 13 51 417 13 309 9.79e-27 111
MS.gene76589.t1 MTR_5g046120 42.478 113 58 3 53 162 15 123 9.14e-18 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76589.t1 AT1G77850 36.822 535 270 11 9 494 16 531 6.85e-107 331
MS.gene76589.t1 AT1G77850 36.822 535 270 11 9 494 16 531 8.07e-107 332
MS.gene76589.t1 AT2G28350 39.655 406 181 9 4 351 2 401 1.13e-84 276
MS.gene76589.t1 AT2G28350 39.655 406 181 9 4 351 2 401 1.51e-84 276
MS.gene76589.t1 AT4G30080 36.784 454 217 9 9 411 16 450 1.91e-84 275
MS.gene76589.t1 AT4G23980 37.982 337 187 8 12 332 12 342 1.15e-63 219
MS.gene76589.t1 AT4G23980 37.982 337 187 8 12 332 12 342 1.23e-63 219
MS.gene76589.t1 AT2G33860 36.261 353 185 8 12 337 54 393 1.93e-63 218
MS.gene76589.t1 AT2G46530 36.111 360 204 10 12 355 21 370 1.84e-58 204
MS.gene76589.t1 AT5G37020 33.687 377 219 10 12 366 22 389 2.15e-58 207
MS.gene76589.t1 AT5G37020 33.687 377 219 10 12 366 22 389 3.53e-58 207
MS.gene76589.t1 AT2G46530 36.111 360 204 10 12 355 42 391 4.18e-58 204
MS.gene76589.t1 AT3G61830 35.097 359 209 9 12 353 25 376 9.13e-58 202
MS.gene76589.t1 AT1G59750 34.734 357 212 7 12 352 22 373 9.82e-57 201
MS.gene76589.t1 AT1G59750 34.734 357 212 7 12 352 22 373 9.82e-57 201
MS.gene76589.t1 AT1G59750 34.734 357 212 7 12 352 22 373 9.98e-57 201
MS.gene76589.t1 AT1G59750 34.734 357 212 7 12 352 22 373 1.08e-56 201
MS.gene76589.t1 AT5G60450 36.538 364 209 9 7 349 36 398 1.72e-56 202
MS.gene76589.t1 AT1G35520 35.457 361 205 9 12 355 27 376 2.47e-56 198
MS.gene76589.t1 AT1G19850 36.011 361 190 12 9 342 51 397 3.50e-56 202
MS.gene76589.t1 AT1G19850 36.011 361 190 12 9 342 40 386 3.73e-56 202
MS.gene76589.t1 AT5G60450 36.769 359 205 9 12 349 65 422 4.76e-56 201
MS.gene76589.t1 AT1G30330 34.711 363 204 11 12 351 25 377 1.70e-54 197
MS.gene76589.t1 AT1G30330 34.711 363 204 11 12 351 25 377 1.70e-54 197
MS.gene76589.t1 AT1G30330 34.711 363 204 11 12 351 23 375 2.16e-54 197
MS.gene76589.t1 AT5G62000 34.332 367 205 10 12 354 61 415 7.35e-54 195
MS.gene76589.t1 AT5G62000 33.696 368 206 10 12 354 61 415 8.05e-54 195
MS.gene76589.t1 AT5G62000 33.696 368 206 10 12 354 61 415 8.05e-54 195
MS.gene76589.t1 AT5G62000 33.696 368 206 10 12 354 61 415 8.05e-54 195
MS.gene76589.t1 AT5G62000 33.696 368 206 10 12 354 61 415 8.05e-54 195
MS.gene76589.t1 AT1G34410 35.693 339 191 8 12 334 27 354 1.00e-53 191
MS.gene76589.t1 AT1G35540 35.294 340 193 8 12 335 27 355 1.60e-53 191
MS.gene76589.t1 AT1G35240 35.693 339 191 8 12 334 27 354 3.48e-53 190
MS.gene76589.t1 AT1G34390 33.973 365 203 11 12 355 27 374 5.64e-53 189
MS.gene76589.t1 AT1G34310 35.652 345 193 9 7 334 22 354 6.77e-53 189
MS.gene76589.t1 AT1G19220 33.978 362 195 10 9 342 20 365 1.15e-51 190
MS.gene76589.t1 AT5G20730 33.333 357 205 7 9 342 21 367 3.64e-50 186
MS.gene76589.t1 AT5G20730 33.333 357 205 7 9 342 21 367 3.78e-50 186
MS.gene76589.t1 AT5G20730 33.613 357 203 8 9 342 21 366 1.13e-49 184
MS.gene76589.t1 AT2G33860 39.076 238 128 4 114 337 2 236 4.81e-49 176
MS.gene76589.t1 AT3G61830 34.951 309 180 8 59 353 24 325 5.37e-46 169
MS.gene76589.t1 AT1G34170 30.523 344 204 9 12 334 25 354 1.11e-44 165
MS.gene76589.t1 AT5G37020 34.328 268 157 7 114 366 31 294 1.73e-42 162
MS.gene76589.t1 AT2G46530 37.209 258 141 8 111 355 34 283 4.71e-40 152
MS.gene76589.t1 AT1G34170 30.952 336 187 11 12 334 25 328 1.81e-38 147
MS.gene76589.t1 AT1G34170 31.250 336 186 11 12 334 25 328 3.78e-38 147
MS.gene76589.t1 AT1G43950 36.364 209 113 5 12 213 27 222 1.22e-33 127

Find 132 sgRNAs with CRISPR-Local

Find 173 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATGTTTAAACTCTATATT+TGG 0.091140 5.1:+30978803 None:intergenic
CCTGGTTCATTTATGCTATT+TGG 0.118465 5.1:-30978491 MS.gene76589:CDS
TCTCAATATCATAGGTTAAA+TGG 0.119810 5.1:-30979021 MS.gene76589:intron
GCACAGCACTGCCAGATTTC+TGG 0.173902 5.1:+30980517 None:intergenic
TGCTGCATTCAGTGATAAAA+AGG 0.230634 5.1:-30978870 MS.gene76589:CDS
CAATCTTGGTCCTATATCTT+TGG 0.252865 5.1:-30978600 MS.gene76589:CDS
GGGAGAGTGTGTTAGGGTTT+GGG 0.258688 5.1:+30980413 None:intergenic
CGTGTTTACTACTTCCCATT+AGG 0.273970 5.1:-30980460 MS.gene76589:CDS
CCTAACACACTCTCCCTTCT+TGG 0.290201 5.1:-30980406 MS.gene76589:CDS
CCAAGAAGGGAGAGTGTGTT+AGG 0.303749 5.1:+30980406 None:intergenic
GTGATATTCACGGCAAAGTT+TGG 0.308610 5.1:-30980078 MS.gene76589:CDS
ATGTGTTCTAAGTGCCCTAA+TGG 0.313804 5.1:+30980445 None:intergenic
TTTGATGCCTTCAATTTCAT+TGG 0.329868 5.1:+30978397 None:intergenic
TGAACCAGGACTAACTTTCT+TGG 0.334964 5.1:+30978505 None:intergenic
GATAAAAGCAATGGTTTCCT+TGG 0.335382 5.1:-30978668 MS.gene76589:CDS
TCTGGAACGTGCGAGACTTT+AGG 0.336417 5.1:+30978992 None:intergenic
TAAACACGAGAATATAGTTT+TGG 0.340637 5.1:+30980475 None:intergenic
TGAGTCTTTCATGAAAATTA+AGG 0.342069 5.1:+30979958 None:intergenic
GATATAGGACCAAGATTGTT+TGG 0.344613 5.1:+30978605 None:intergenic
GATTTCTGGCTCAACACGGC+TGG 0.344702 5.1:+30980531 None:intergenic
AGGGAGAGTGTGTTAGGGTT+TGG 0.345088 5.1:+30980412 None:intergenic
ATTGTTCAACAATGTTTGAT+TGG 0.354882 5.1:+30978766 None:intergenic
GTTTACGGAGGCATTGGAAT+TGG 0.359403 5.1:-30979864 MS.gene76589:CDS
ATGAATATTAAGTGGAATCT+TGG 0.367936 5.1:-30979749 MS.gene76589:CDS
CTCAATATCATAGGTTAAAT+GGG 0.383997 5.1:-30979020 MS.gene76589:intron
GCCGTGTTGAGCCAGAAATC+TGG 0.395763 5.1:-30980528 MS.gene76589:CDS
GTGTTTACTACTTCCCATTA+GGG 0.402184 5.1:-30980459 MS.gene76589:CDS
GAAATCTGGCAGTGCTGTGC+AGG 0.404779 5.1:-30980514 MS.gene76589:CDS
AATGTTTAAACTCTATATTT+GGG 0.405482 5.1:+30978804 None:intergenic
AAAGAGATGCTCAAAATTTG+AGG 0.405775 5.1:-30979687 MS.gene76589:CDS
GTTCGCCGACAGACAAAGTT+TGG 0.410958 5.1:-30979914 MS.gene76589:CDS
AGCATCCGCCATGGACGATT+AGG 0.415227 5.1:+30979641 None:intergenic
CATTGCATCCTCCACAACTT+TGG 0.422061 5.1:+30979769 None:intergenic
TTCCAGAGAGAGTCAGTCCT+TGG 0.427770 5.1:-30978976 MS.gene76589:CDS
TCTTGAAAATCGCTTCCAAC+AGG 0.432199 5.1:+30978455 None:intergenic
TCCCAAGGACTGACTCTCTC+TGG 0.440968 5.1:+30978974 None:intergenic
ATTAATTTCGCGCATTCCAC+TGG 0.445870 5.1:+30980154 None:intergenic
TCTCTTGTGACAAAGTTTGC+CGG 0.446910 5.1:-30978545 MS.gene76589:CDS
AGACCAAGATGATGGCAAAA+AGG 0.450916 5.1:-30980239 MS.gene76589:CDS
GTGTATTATCCGATGGCTAA+AGG 0.458436 5.1:-30979815 MS.gene76589:CDS
GGAGAGTGTGTTAGGGTTTG+GGG 0.461223 5.1:+30980414 None:intergenic
GCTCTTCTTGATTGCATGCA+GGG 0.464239 5.1:-30978740 MS.gene76589:CDS
GACATCTGCTTACCACTGAT+TGG 0.464434 5.1:-30980021 MS.gene76589:CDS
ATAAAAGCAATGGTTTCCTT+GGG 0.470549 5.1:-30978667 MS.gene76589:CDS
TCAAGTGAGCCAAACAATCT+TGG 0.472055 5.1:-30978614 MS.gene76589:CDS
GGTGACAAGTCCAAAGATAT+AGG 0.472899 5.1:+30978590 None:intergenic
TGCTCTTCTTGATTGCATGC+AGG 0.478114 5.1:-30978741 MS.gene76589:CDS
AAAATCGTTTACGGAGGCAT+TGG 0.479022 5.1:-30979870 MS.gene76589:CDS
TCCAGAGAGAGTCAGTCCTT+GGG 0.479886 5.1:-30978975 MS.gene76589:CDS
AAAGCTTAGAAAATCTGATC+AGG 0.481737 5.1:-30978897 MS.gene76589:CDS
TGGGGTGAGAGTCTTGGTAT+AGG 0.489342 5.1:+30980210 None:intergenic
CTCCTTCGTCCCAAATATAG+AGG 0.491263 5.1:-30978843 MS.gene76589:CDS
TTGATTGCATGCAGGGAGCC+CGG 0.491918 5.1:-30978733 MS.gene76589:CDS
TCTTGGTCTTCACGAACCTC+AGG 0.497877 5.1:+30980253 None:intergenic
AGTGTGTTAGGGTTTGGGGA+TGG 0.498039 5.1:+30980418 None:intergenic
CTCACTCCTGTCACTAATAA+CGG 0.499710 5.1:-30980295 MS.gene76589:CDS
TGTGTTCTAAGTGCCCTAAT+GGG 0.500812 5.1:+30980446 None:intergenic
TACGGAGGCATTGGAATTGG+CGG 0.504623 5.1:-30979861 MS.gene76589:CDS
CAAGAGAGTTAGAAATATCA+TGG 0.505101 5.1:+30978561 None:intergenic
ATTTCTGGCTCAACACGGCT+GGG 0.505787 5.1:+30980532 None:intergenic
CCGCCATTGTTAGCATCAGA+TGG 0.508974 5.1:+30980190 None:intergenic
TCACGAACCTCAGGAGATTG+AGG 0.509135 5.1:+30980262 None:intergenic
CGCCATTGTTAGCATCAGAT+GGG 0.516466 5.1:+30980191 None:intergenic
GAGACGGTGCATAGAATGAA+TGG 0.520972 5.1:+30980373 None:intergenic
AAAGGCTCCAATGAAATTGA+AGG 0.522242 5.1:-30978404 MS.gene76589:CDS
TGAACACCGTTATTAGTGAC+AGG 0.525054 5.1:+30980289 None:intergenic
GGTAAGATCATAAAACCTGT+TGG 0.525681 5.1:-30978470 MS.gene76589:CDS
CAGCATTGAGGTCAAGTGGC+GGG 0.528362 5.1:+30980128 None:intergenic
TTTATGAATGATAAAAGCAA+TGG 0.529057 5.1:-30978677 MS.gene76589:CDS
CTCTCCATCAGTGATATTCA+CGG 0.529787 5.1:-30980088 MS.gene76589:CDS
GCAGTGCTGTGCAGGCAGTT+CGG 0.530524 5.1:-30980506 MS.gene76589:CDS
GGTGTTGCTGTTGTCAGTAC+CGG 0.533496 5.1:+30978526 None:intergenic
AATATTAAGTGGAATCTTGG+AGG 0.534264 5.1:-30979746 MS.gene76589:CDS
ATCAGATGGGGTGAGAGTCT+TGG 0.534822 5.1:+30980204 None:intergenic
TGAAGTTGTGTATTATCCGA+TGG 0.535100 5.1:-30979822 MS.gene76589:CDS
AAGAGATGCTCAAAATTTGA+GGG 0.539733 5.1:-30979686 MS.gene76589:CDS
ATGGGAAATGATGATTGTAA+AGG 0.540341 5.1:-30978422 MS.gene76589:CDS
GTTCAACAATGTTTGATTGG+AGG 0.545186 5.1:+30978769 None:intergenic
TCGTCCATGGCGGATGCTTG+AGG 0.546119 5.1:-30979636 MS.gene76589:intron
TGGATACAGTGCAAATATGT+CGG 0.548922 5.1:+30978937 None:intergenic
AGGATGCAATGAATATTAAG+TGG 0.550257 5.1:-30979757 MS.gene76589:CDS
ATGGACGGGAACTGCCAAGA+AGG 0.550509 5.1:+30980392 None:intergenic
CAAGAAGGGAGAGTGTGTTA+GGG 0.557064 5.1:+30980407 None:intergenic
GTTGACAAGAAGAAACTAGT+TGG 0.559606 5.1:-30979989 MS.gene76589:CDS
TTTCCTTGGGAACAATTCTA+CGG 0.560425 5.1:-30978654 MS.gene76589:CDS
TTTCAAGAAGTAGATATCAT+GGG 0.561761 5.1:-30978440 MS.gene76589:CDS
CGGTGCATTCTCCGTGCCAG+TGG 0.572523 5.1:-30980170 MS.gene76589:CDS
AGTGGTAAGCAGATGTCGCA+AGG 0.572865 5.1:+30980027 None:intergenic
AGCCTCTATATTTGGGACGA+AGG 0.575856 5.1:+30978841 None:intergenic
GCTGGGTTGCTGAGAAGACA+TGG 0.576060 5.1:+30980549 None:intergenic
GAGTAGGTCAACCGCGGAGA+CGG 0.578786 5.1:+30980357 None:intergenic
TAGTTTGACGAATACTTCAT+CGG 0.580000 5.1:+30980321 None:intergenic
GTTCGTGAAGACCAAGATGA+TGG 0.580300 5.1:-30980247 MS.gene76589:CDS
TATCTGCTCCTAATCGTCCA+TGG 0.582308 5.1:-30979649 MS.gene76589:CDS
AAAGTTGGAAGAAGTTGATG+TGG 0.582671 5.1:+30978697 None:intergenic
AGGGAGTCCCACGGTAGACA+TGG 0.583730 5.1:+30980047 None:intergenic
TGGACGGGAACTGCCAAGAA+GGG 0.586243 5.1:+30980393 None:intergenic
TGTTGTTGATGCCAAAGTTG+TGG 0.589052 5.1:-30979780 MS.gene76589:CDS
TTACACCAACCTTTAGCCAT+CGG 0.591900 5.1:+30979806 None:intergenic
GGAATTGGCGGATAAGAACA+TGG 0.591988 5.1:-30979849 MS.gene76589:CDS
TTAGAAATATCATGGCTATG+AGG 0.592683 5.1:+30978569 None:intergenic
AACACCAAGAAAGTTAGTCC+TGG 0.601578 5.1:-30978509 MS.gene76589:CDS
CAGCACCAAACTTTGTCTGT+CGG 0.605931 5.1:+30979909 None:intergenic
GAAATAGTTTCAACCTCCCA+AGG 0.609478 5.1:+30978959 None:intergenic
TTTGCCGTGAATATCACTGA+TGG 0.609703 5.1:+30980084 None:intergenic
CCAAATAGCATAAATGAACC+AGG 0.612115 5.1:+30978491 None:intergenic
AGAGAGAGTCAGTCCTTGGG+AGG 0.615146 5.1:-30978972 MS.gene76589:CDS
ATATTAAGTGGAATCTTGGA+GGG 0.616357 5.1:-30979745 MS.gene76589:CDS
ATTATCCGATGGCTAAAGGT+TGG 0.620292 5.1:-30979811 MS.gene76589:CDS
CATTCTATGCACCGTCTCCG+CGG 0.621676 5.1:-30980368 MS.gene76589:CDS
TCAGACGGAAATATCTCAGT+CGG 0.627485 5.1:-30979938 MS.gene76589:CDS
GACAAGAAGAAACTAGTTGG+CGG 0.628517 5.1:-30979986 MS.gene76589:CDS
CGGTGCATAGAATGAATGGA+CGG 0.632419 5.1:+30980377 None:intergenic
TATACCTCAAGCATCCGCCA+TGG 0.633522 5.1:+30979632 None:intergenic
GTGCCGTAGAATTGTTCCCA+AGG 0.635548 5.1:+30978651 None:intergenic
TGTTGATGCCAAAGTTGTGG+AGG 0.640943 5.1:-30979777 MS.gene76589:CDS
AACGAACTCACTCCAATCAG+TGG 0.642790 5.1:+30980009 None:intergenic
GGTGCATAGAATGAATGGAC+GGG 0.644683 5.1:+30980378 None:intergenic
CGTTATTAGTGACAGGAGTG+AGG 0.644895 5.1:+30980296 None:intergenic
CGGTACAAGAGTCAGCGAGT+AGG 0.652069 5.1:+30980341 None:intergenic
TTTCGCGCATTCCACTGGCA+CGG 0.656401 5.1:+30980159 None:intergenic
ACCCCATCTGATGCTAACAA+TGG 0.658035 5.1:-30980193 MS.gene76589:CDS
CTGATGGAGAGTTCTTGAGA+CGG 0.666946 5.1:+30980100 None:intergenic
GTGGTAAGCAGATGTCGCAA+GGG 0.667574 5.1:+30980028 None:intergenic
TCACGAACCTCAATCTCCTG+AGG 0.668607 5.1:-30980269 MS.gene76589:CDS
TCAGCATTGAGGTCAAGTGG+CGG 0.682470 5.1:+30980127 None:intergenic
GTCAGCGAGTAGGTCAACCG+CGG 0.683086 5.1:+30980351 None:intergenic
GCCATTGTTAGCATCAGATG+GGG 0.683328 5.1:+30980192 None:intergenic
GCCAGATTTCTGGCTCAACA+CGG 0.683376 5.1:+30980527 None:intergenic
CCATCTGATGCTAACAATGG+CGG 0.690560 5.1:-30980190 MS.gene76589:CDS
GATGTCGCAAGGGAGTCCCA+CGG 0.699974 5.1:+30980038 None:intergenic
CTGCTCCTAATCGTCCATGG+CGG 0.723801 5.1:-30979646 MS.gene76589:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCATTTAAAATATATGATA+AGG + chr5.1:30979863-30979882 None:intergenic 10.0%
!!! TATCATATATTTTAAATGAT+TGG - chr5.1:30979863-30979882 MS.gene76589:CDS 10.0%
!!! TTAATTAACTTTCTTTTTTA+GGG - chr5.1:30979488-30979507 MS.gene76589:intron 10.0%
!!! TTTAATTAACTTTCTTTTTT+AGG - chr5.1:30979487-30979506 MS.gene76589:intron 10.0%
!! AAAAAGAAAGTTAATTAAAC+AGG + chr5.1:30979486-30979505 None:intergenic 15.0%
!! AAATGTTTAAACTCTATATT+TGG + chr5.1:30980129-30980148 None:intergenic 15.0%
!! AATGTTTAAACTCTATATTT+GGG + chr5.1:30980128-30980147 None:intergenic 15.0%
!!! TATTTTTATCTCAATATCAT+AGG - chr5.1:30979900-30979919 MS.gene76589:CDS 15.0%
!! AAACTTAAATACCATTTCTT+AGG + chr5.1:30979759-30979778 None:intergenic 20.0%
!! AAATACTCTTAATGTTAAGT+AGG - chr5.1:30979806-30979825 MS.gene76589:CDS 20.0%
!! ATTCTTTATGAAGTTGAAAT+AGG - chr5.1:30979589-30979608 MS.gene76589:intron 20.0%
!! TATTTCAACTTCATAAAGAA+TGG + chr5.1:30979590-30979609 None:intergenic 20.0%
!! TTGTACAGTATACTTTATAT+AGG - chr5.1:30979647-30979666 MS.gene76589:CDS 20.0%
!! TTTATGAATGATAAAAGCAA+TGG - chr5.1:30980252-30980271 MS.gene76589:CDS 20.0%
!!! ACATTAAGAGTATTTACAAT+AGG + chr5.1:30979801-30979820 None:intergenic 20.0%
! AGTCATTGCAGTTAATTTAA+TGG + chr5.1:30979544-30979563 None:intergenic 25.0%
! ATGAATATTAAGTGGAATCT+TGG - chr5.1:30979180-30979199 MS.gene76589:intron 25.0%
! ATTGTTCAACAATGTTTGAT+TGG + chr5.1:30980166-30980185 None:intergenic 25.0%
! CTCAATATCATAGGTTAAAT+GGG - chr5.1:30979909-30979928 MS.gene76589:CDS 25.0%
! GATAACAGAAAAATCGTTTA+CGG - chr5.1:30979050-30979069 MS.gene76589:intron 25.0%
! TAGTGATATTTCCTAAGAAA+TGG - chr5.1:30979745-30979764 MS.gene76589:CDS 25.0%
! TCAAAAAAGCCTCTATATTT+GGG + chr5.1:30980098-30980117 None:intergenic 25.0%
! TCTCAATATCATAGGTTAAA+TGG - chr5.1:30979908-30979927 MS.gene76589:CDS 25.0%
! TGAGTCTTTCATGAAAATTA+AGG + chr5.1:30978974-30978993 None:intergenic 25.0%
! TTCAAAAAAGCCTCTATATT+TGG + chr5.1:30980099-30980118 None:intergenic 25.0%
! TTCTTAGGAAATATCACTAT+TGG + chr5.1:30979744-30979763 None:intergenic 25.0%
! TTTCAAGAAGTAGATATCAT+GGG - chr5.1:30980489-30980508 MS.gene76589:CDS 25.0%
!! GCTTTTATCATTCATAAAGT+TGG + chr5.1:30980250-30980269 None:intergenic 25.0%
!! TAAACACGAGAATATAGTTT+TGG + chr5.1:30978457-30978476 None:intergenic 25.0%
!!! GATTTTCTAAGCTTTTTTGT+CGG + chr5.1:30980027-30980046 None:intergenic 25.0%
!!! TTTTCAAGAAGTAGATATCA+TGG - chr5.1:30980488-30980507 MS.gene76589:CDS 25.0%
AAAGAGATGCTCAAAATTTG+AGG - chr5.1:30979242-30979261 MS.gene76589:intron 30.0%
AAAGCTTAGAAAATCTGATC+AGG - chr5.1:30980032-30980051 MS.gene76589:CDS 30.0%
AAGAGATGCTCAAAATTTGA+GGG - chr5.1:30979243-30979262 MS.gene76589:intron 30.0%
AAGATAAACCGTAACTTACT+TGG + chr5.1:30979409-30979428 None:intergenic 30.0%
AATATTAAGTGGAATCTTGG+AGG - chr5.1:30979183-30979202 MS.gene76589:intron 30.0%
ACTTGGTCTCATAATTAACT+AGG + chr5.1:30979392-30979411 None:intergenic 30.0%
AGGATGCAATGAATATTAAG+TGG - chr5.1:30979172-30979191 MS.gene76589:intron 30.0%
ATAAAAGCAATGGTTTCCTT+GGG - chr5.1:30980262-30980281 MS.gene76589:CDS 30.0%
ATATTAAGTGGAATCTTGGA+GGG - chr5.1:30979184-30979203 MS.gene76589:intron 30.0%
ATGGGAAATGATGATTGTAA+AGG - chr5.1:30980507-30980526 MS.gene76589:CDS 30.0%
CAAGAGAGTTAGAAATATCA+TGG + chr5.1:30980371-30980390 None:intergenic 30.0%
CATAAACTGAGACAACTTAT+TGG + chr5.1:30979620-30979639 None:intergenic 30.0%
CTTGGTCTCATAATTAACTA+GGG + chr5.1:30979391-30979410 None:intergenic 30.0%
TAGTTTGACGAATACTTCAT+CGG + chr5.1:30978611-30978630 None:intergenic 30.0%
TTAGAAATATCATGGCTATG+AGG + chr5.1:30980363-30980382 None:intergenic 30.0%
TTATGAGACCAAGTAAGTTA+CGG - chr5.1:30979398-30979417 MS.gene76589:intron 30.0%
TTTGATGCCTTCAATTTCAT+TGG + chr5.1:30980535-30980554 None:intergenic 30.0%
! ATTTTCATGAAAGACTCAGA+CGG - chr5.1:30978976-30978995 MS.gene76589:CDS 30.0%
!! AAGTTGATGTGGAAAAAAGA+CGG + chr5.1:30980224-30980243 None:intergenic 30.0%
!!! TATAGAGGCTTTTTTGAAGA+TGG - chr5.1:30980101-30980120 MS.gene76589:CDS 30.0%
AAAGGCTCCAATGAAATTGA+AGG - chr5.1:30980525-30980544 MS.gene76589:CDS 35.0%
AACAGAAAAATCGTTTACGG+AGG - chr5.1:30979053-30979072 MS.gene76589:intron 35.0%
AACTGAGACAACTTATTGGA+CGG + chr5.1:30979616-30979635 None:intergenic 35.0%
CAATCTTGGTCCTATATCTT+TGG - chr5.1:30980329-30980348 MS.gene76589:CDS 35.0%
CCAAATAGCATAAATGAACC+AGG + chr5.1:30980441-30980460 None:intergenic 35.0%
CCTGGTTCATTTATGCTATT+TGG - chr5.1:30980438-30980457 MS.gene76589:CDS 35.0%
GATAAAAGCAATGGTTTCCT+TGG - chr5.1:30980261-30980280 MS.gene76589:CDS 35.0%
GATATAGGACCAAGATTGTT+TGG + chr5.1:30980327-30980346 None:intergenic 35.0%
GCTGCATTCAGTGATAAAAA+GGG - chr5.1:30980060-30980079 MS.gene76589:CDS 35.0%
GGTAAGATCATAAAACCTGT+TGG - chr5.1:30980459-30980478 MS.gene76589:CDS 35.0%
GTGTTTACTACTTCCCATTA+GGG - chr5.1:30978470-30978489 MS.gene76589:CDS 35.0%
GTTCAACAATGTTTGATTGG+AGG + chr5.1:30980163-30980182 None:intergenic 35.0%
GTTGACAAGAAGAAACTAGT+TGG - chr5.1:30978940-30978959 MS.gene76589:CDS 35.0%
TGAAGTTGTGTATTATCCGA+TGG - chr5.1:30979107-30979126 MS.gene76589:intron 35.0%
TGCTGCATTCAGTGATAAAA+AGG - chr5.1:30980059-30980078 MS.gene76589:CDS 35.0%
TGGATACAGTGCAAATATGT+CGG + chr5.1:30979995-30980014 None:intergenic 35.0%
TTTCCTTGGGAACAATTCTA+CGG - chr5.1:30980275-30980294 MS.gene76589:CDS 35.0%
!! AAAGTTGGAAGAAGTTGATG+TGG + chr5.1:30980235-30980254 None:intergenic 35.0%
!!! TTCTAAGCTTTTTTGTCGGT+TGG + chr5.1:30980023-30980042 None:intergenic 35.0%
!!! TTTTTTGTCGGTTGGAATTG+TGG + chr5.1:30980015-30980034 None:intergenic 35.0%
AACACCAAGAAAGTTAGTCC+TGG - chr5.1:30980420-30980439 MS.gene76589:CDS 40.0%
ATTAATTTCGCGCATTCCAC+TGG + chr5.1:30978778-30978797 None:intergenic 40.0%
ATTATCCGATGGCTAAAGGT+TGG - chr5.1:30979118-30979137 MS.gene76589:intron 40.0%
CGTGTTTACTACTTCCCATT+AGG - chr5.1:30978469-30978488 MS.gene76589:CDS 40.0%
CTCACTCCTGTCACTAATAA+CGG - chr5.1:30978634-30978653 MS.gene76589:CDS 40.0%
CTCTCCATCAGTGATATTCA+CGG - chr5.1:30978841-30978860 MS.gene76589:CDS 40.0%
GAAATAGTTTCAACCTCCCA+AGG + chr5.1:30979973-30979992 None:intergenic 40.0%
GACAAGAAGAAACTAGTTGG+CGG - chr5.1:30978943-30978962 MS.gene76589:CDS 40.0%
GGTGACAAGTCCAAAGATAT+AGG + chr5.1:30980342-30980361 None:intergenic 40.0%
GTGATATTCACGGCAAAGTT+TGG - chr5.1:30978851-30978870 MS.gene76589:CDS 40.0%
GTGTATTATCCGATGGCTAA+AGG - chr5.1:30979114-30979133 MS.gene76589:intron 40.0%
TCAAGTGAGCCAAACAATCT+TGG - chr5.1:30980315-30980334 MS.gene76589:CDS 40.0%
TCAGACGGAAATATCTCAGT+CGG - chr5.1:30978991-30979010 MS.gene76589:CDS 40.0%
TCTCTTGTGACAAAGTTTGC+CGG - chr5.1:30980384-30980403 MS.gene76589:CDS 40.0%
TCTTGAAAATCGCTTCCAAC+AGG + chr5.1:30980477-30980496 None:intergenic 40.0%
TGAACACCGTTATTAGTGAC+AGG + chr5.1:30978643-30978662 None:intergenic 40.0%
TGAACCAGGACTAACTTTCT+TGG + chr5.1:30980427-30980446 None:intergenic 40.0%
TGTTGTTGATGCCAAAGTTG+TGG - chr5.1:30979149-30979168 MS.gene76589:intron 40.0%
TTACACCAACCTTTAGCCAT+CGG + chr5.1:30979126-30979145 None:intergenic 40.0%
TTTGCCGTGAATATCACTGA+TGG + chr5.1:30978848-30978867 None:intergenic 40.0%
! AAAATCGTTTACGGAGGCAT+TGG - chr5.1:30979059-30979078 MS.gene76589:intron 40.0%
! AGACCAAGATGATGGCAAAA+AGG - chr5.1:30978690-30978709 MS.gene76589:CDS 40.0%
! ATGTGTTCTAAGTGCCCTAA+TGG + chr5.1:30978487-30978506 None:intergenic 40.0%
! CAACCTTTTTGCCATCATCT+TGG + chr5.1:30978696-30978715 None:intergenic 40.0%
! TGTGTTCTAAGTGCCCTAAT+GGG + chr5.1:30978486-30978505 None:intergenic 40.0%
!! CACTATTGGAGCAAGTTGAT+AGG + chr5.1:30979730-30979749 None:intergenic 40.0%
!! TTTTCAGCATTGAGGTCAAG+TGG + chr5.1:30978808-30978827 None:intergenic 40.0%
AACGAACTCACTCCAATCAG+TGG + chr5.1:30978923-30978942 None:intergenic 45.0%
ACCCCATCTGATGCTAACAA+TGG - chr5.1:30978736-30978755 MS.gene76589:CDS 45.0%
ATGTGGAAAAAAGACGGTGC+CGG + chr5.1:30980218-30980237 None:intergenic 45.0%
CAGCACCAAACTTTGTCTGT+CGG + chr5.1:30979023-30979042 None:intergenic 45.0%
CATTGCATCCTCCACAACTT+TGG + chr5.1:30979163-30979182 None:intergenic 45.0%
CCATCTGATGCTAACAATGG+CGG - chr5.1:30978739-30978758 MS.gene76589:CDS 45.0%
CGCCATTGTTAGCATCAGAT+GGG + chr5.1:30978741-30978760 None:intergenic 45.0%
CGGTGCATAGAATGAATGGA+CGG + chr5.1:30978555-30978574 None:intergenic 45.0%
CGTTATTAGTGACAGGAGTG+AGG + chr5.1:30978636-30978655 None:intergenic 45.0%
CTCCTTCGTCCCAAATATAG+AGG - chr5.1:30980086-30980105 MS.gene76589:CDS 45.0%
CTGATGGAGAGTTCTTGAGA+CGG + chr5.1:30978832-30978851 None:intergenic 45.0%
GACATCTGCTTACCACTGAT+TGG - chr5.1:30978908-30978927 MS.gene76589:CDS 45.0%
GAGACGGTGCATAGAATGAA+TGG + chr5.1:30978559-30978578 None:intergenic 45.0%
GCCATTGTTAGCATCAGATG+GGG + chr5.1:30978740-30978759 None:intergenic 45.0%
GCTCTTCTTGATTGCATGCA+GGG - chr5.1:30980189-30980208 MS.gene76589:CDS 45.0%
GGTGCATAGAATGAATGGAC+GGG + chr5.1:30978554-30978573 None:intergenic 45.0%
GTTCGTGAAGACCAAGATGA+TGG - chr5.1:30978682-30978701 MS.gene76589:CDS 45.0%
TATCTGCTCCTAATCGTCCA+TGG - chr5.1:30979280-30979299 MS.gene76589:intron 45.0%
TGCTCTTCTTGATTGCATGC+AGG - chr5.1:30980188-30980207 MS.gene76589:CDS 45.0%
TGTTGATGCCAAAGTTGTGG+AGG - chr5.1:30979152-30979171 MS.gene76589:intron 45.0%
! AATTTTCGCCATGTCTACCG+TGG - chr5.1:30978874-30978893 MS.gene76589:CDS 45.0%
! AGCCTCTATATTTGGGACGA+AGG + chr5.1:30980091-30980110 None:intergenic 45.0%
! ATTTTCGCCATGTCTACCGT+GGG - chr5.1:30978875-30978894 MS.gene76589:CDS 45.0%
! CAAGAAGGGAGAGTGTGTTA+GGG + chr5.1:30978525-30978544 None:intergenic 45.0%
! GGAATTGGCGGATAAGAACA+TGG - chr5.1:30979080-30979099 MS.gene76589:intron 45.0%
!! GTTTACGGAGGCATTGGAAT+TGG - chr5.1:30979065-30979084 MS.gene76589:intron 45.0%
AGTGGTAAGCAGATGTCGCA+AGG + chr5.1:30978905-30978924 None:intergenic 50.0%
AGTGTGTTAGGGTTTGGGGA+TGG + chr5.1:30978514-30978533 None:intergenic 50.0%
ATCAGATGGGGTGAGAGTCT+TGG + chr5.1:30978728-30978747 None:intergenic 50.0%
CCGCCATTGTTAGCATCAGA+TGG + chr5.1:30978742-30978761 None:intergenic 50.0%
CCTAACACACTCTCCCTTCT+TGG - chr5.1:30978523-30978542 MS.gene76589:CDS 50.0%
GTGCCGTAGAATTGTTCCCA+AGG + chr5.1:30980281-30980300 None:intergenic 50.0%
GTGGTAAGCAGATGTCGCAA+GGG + chr5.1:30978904-30978923 None:intergenic 50.0%
GTTCGCCGACAGACAAAGTT+TGG - chr5.1:30979015-30979034 MS.gene76589:intron 50.0%
TATACCTCAAGCATCCGCCA+TGG + chr5.1:30979300-30979319 None:intergenic 50.0%
TCACGAACCTCAATCTCCTG+AGG - chr5.1:30978660-30978679 MS.gene76589:CDS 50.0%
TCACGAACCTCAGGAGATTG+AGG + chr5.1:30978670-30978689 None:intergenic 50.0%
TCCAGAGAGAGTCAGTCCTT+GGG - chr5.1:30979954-30979973 MS.gene76589:CDS 50.0%
TGGGGTGAGAGTCTTGGTAT+AGG + chr5.1:30978722-30978741 None:intergenic 50.0%
TGTGGAAAAAAGACGGTGCC+GGG + chr5.1:30980217-30980236 None:intergenic 50.0%
TTCCAGAGAGAGTCAGTCCT+TGG - chr5.1:30979953-30979972 MS.gene76589:CDS 50.0%
! AGGGAGAGTGTGTTAGGGTT+TGG + chr5.1:30978520-30978539 None:intergenic 50.0%
! CCAAGAAGGGAGAGTGTGTT+AGG + chr5.1:30978526-30978545 None:intergenic 50.0%
! GAGACGGCTTTTCAGCATTG+AGG + chr5.1:30978816-30978835 None:intergenic 50.0%
! GGAGAGTGTGTTAGGGTTTG+GGG + chr5.1:30978518-30978537 None:intergenic 50.0%
! GGGAGAGTGTGTTAGGGTTT+GGG + chr5.1:30978519-30978538 None:intergenic 50.0%
! TCAGCATTGAGGTCAAGTGG+CGG + chr5.1:30978805-30978824 None:intergenic 50.0%
! TCTGGAACGTGCGAGACTTT+AGG + chr5.1:30979940-30979959 None:intergenic 50.0%
! TCTTGGTCTTCACGAACCTC+AGG + chr5.1:30978679-30978698 None:intergenic 50.0%
!! ATTTCTGGCTCAACACGGCT+GGG + chr5.1:30978400-30978419 None:intergenic 50.0%
!! GCCAGATTTCTGGCTCAACA+CGG + chr5.1:30978405-30978424 None:intergenic 50.0%
!! GGTGTTGCTGTTGTCAGTAC+CGG + chr5.1:30980406-30980425 None:intergenic 50.0%
!! TACGGAGGCATTGGAATTGG+CGG - chr5.1:30979068-30979087 MS.gene76589:intron 50.0%
AGAGAGAGTCAGTCCTTGGG+AGG - chr5.1:30979957-30979976 MS.gene76589:CDS 55.0%
AGCATCCGCCATGGACGATT+AGG + chr5.1:30979291-30979310 None:intergenic 55.0%
ATGGACGGGAACTGCCAAGA+AGG + chr5.1:30978540-30978559 None:intergenic 55.0%
CATTCTATGCACCGTCTCCG+CGG - chr5.1:30978561-30978580 MS.gene76589:CDS 55.0%
CGGTACAAGAGTCAGCGAGT+AGG + chr5.1:30978591-30978610 None:intergenic 55.0%
CTGCTCCTAATCGTCCATGG+CGG - chr5.1:30979283-30979302 MS.gene76589:intron 55.0%
GAAATCTGGCAGTGCTGTGC+AGG - chr5.1:30978415-30978434 MS.gene76589:CDS 55.0%
GCACAGCACTGCCAGATTTC+TGG + chr5.1:30978415-30978434 None:intergenic 55.0%
GCCGTGTTGAGCCAGAAATC+TGG - chr5.1:30978401-30978420 MS.gene76589:CDS 55.0%
TGGACGGGAACTGCCAAGAA+GGG + chr5.1:30978539-30978558 None:intergenic 55.0%
TTGATTGCATGCAGGGAGCC+CGG - chr5.1:30980196-30980215 MS.gene76589:CDS 55.0%
TTTCGCGCATTCCACTGGCA+CGG + chr5.1:30978773-30978792 None:intergenic 55.0%
! CAGCATTGAGGTCAAGTGGC+GGG + chr5.1:30978804-30978823 None:intergenic 55.0%
! TCCCAAGGACTGACTCTCTC+TGG + chr5.1:30979958-30979977 None:intergenic 55.0%
!! GATTTCTGGCTCAACACGGC+TGG + chr5.1:30978401-30978420 None:intergenic 55.0%
AGGGAGTCCCACGGTAGACA+TGG + chr5.1:30978885-30978904 None:intergenic 60.0%
GAGTAGGTCAACCGCGGAGA+CGG + chr5.1:30978575-30978594 None:intergenic 60.0%
GATGTCGCAAGGGAGTCCCA+CGG + chr5.1:30978894-30978913 None:intergenic 60.0%
GCAGTGCTGTGCAGGCAGTT+CGG - chr5.1:30978423-30978442 MS.gene76589:CDS 60.0%
GTCAGCGAGTAGGTCAACCG+CGG + chr5.1:30978581-30978600 None:intergenic 60.0%
!! TCGTCCATGGCGGATGCTTG+AGG - chr5.1:30979293-30979312 MS.gene76589:intron 60.0%
CGGTGCATTCTCCGTGCCAG+TGG - chr5.1:30978759-30978778 MS.gene76589:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 30978382 30980569 30978382 ID=MS.gene76589
chr5.1 mRNA 30978382 30980569 30978382 ID=MS.gene76589.t1;Parent=MS.gene76589
chr5.1 exon 30979637 30980569 30979637 ID=MS.gene76589.t1.exon1;Parent=MS.gene76589.t1
chr5.1 CDS 30979637 30980569 30979637 ID=cds.MS.gene76589.t1;Parent=MS.gene76589.t1
chr5.1 exon 30978382 30979029 30978382 ID=MS.gene76589.t1.exon2;Parent=MS.gene76589.t1
chr5.1 CDS 30978382 30979029 30978382 ID=cds.MS.gene76589.t1;Parent=MS.gene76589.t1
Gene Sequence

>MS.gene76589

ATGTCTTCTCAGCAACCCAGCCGTGTTGAGCCAGAAATCTGGCAGTGCTGTGCAGGCAGTTCGGTTAAAATTCCAAAACTATATTCTCGTGTTTACTACTTCCCATTAGGGCACTTAGAACACATATGTCCATCCCCAAACCCTAACACACTCTCCCTTCTTGGCAGTTCCCGTCCATTCATTCTATGCACCGTCTCCGCGGTTGACCTACTCGCTGACTCTTGTACCGATGAAGTATTCGTCAAACTACTCCTCACTCCTGTCACTAATAACGGTGTTCACGAACCTCAATCTCCTGAGGTTCGTGAAGACCAAGATGATGGCAAAAAGGTTGTTTCCTATACCAAGACTCTCACCCCATCTGATGCTAACAATGGCGGTGCATTCTCCGTGCCAGTGGAATGCGCGAAATTAATCTTCCCGCCACTTGACCTCAATGCTGAAAAGCCGTCTCAAGAACTCTCCATCAGTGATATTCACGGCAAAGTTTGGAATTTTCGCCATGTCTACCGTGGGACTCCCTTGCGACATCTGCTTACCACTGATTGGAGTGAGTTCGTTGACAAGAAGAAACTAGTTGGCGGCGATTCCTTAATTTTCATGAAAGACTCAGACGGAAATATCTCAGTCGGAGTTCGCCGACAGACAAAGTTTGGTGCTGCTGCTAAGATAACAGAAAAATCGTTTACGGAGGCATTGGAATTGGCGGATAAGAACATGGCTTTTGAAGTTGTGTATTATCCGATGGCTAAAGGTTGGTGTAATTTTGTTGTTGATGCCAAAGTTGTGGAGGATGCAATGAATATTAAGTGGAATCTTGGAGGGAGAATTGAACTTTCTTTGAAGAATTTCGATTCTTCAAAGAGATGCTCAAAATTTGAGGGAACAATATCTGCTCTATCTGCTCCTAATCGTCCATGGCGGATGCTTGAGGTATAATGTTATATGTAGTATTTTTTTTTTTTGTTTCATAATTGTTATTAGTTAGAAGTTGATACATGATTTTCCCTAGTTAATTATGAGACCAAGTAAGTTACGGTTTATCTTGCAAACAAATATCAAGTTACATTTTATTTTCTTACTGTGAAAAAAACTTAAGTTCCTGTTTAATTAACTTTCTTTTTTAGGGCTGTTATTTGTCTTAATCATCATTATTGTGCCATTAAATTAACTGCAATGACTTCAGAAACATTATACTTATGAAACCATTCTTTATGAAGTTGAAATAGGTCCGTCCAATAAGTTGTCTCAGTTTATGTTTACATTTGTACAGTATACTTTATATAGGCAGATTAATTTTAATGTTTAGAATAAGTTGTTTATATGACAATGATTTTTATATGTGCCTATCAACTTGCTCCAATAGTGATATTTCCTAAGAAATGGTATTTAAGTTTAAGAAACTTTTAAGAAACTCCTATTGTAAATACTCTTAATGTTAAGTAGGATCTTGATTCATTATGTAGATGCATACTATACCTTATCATATATTTTAAATGATTGGTATTAGATACTCATTATTTTTATCTCAATATCATAGGTTAAATGGGATGAACCTAAAGTCTCGCACGTTCCAGAGAGAGTCAGTCCTTGGGAGGTTGAAACTATTTCCGACATATTTGCACTGTATCCACAATTCCAACCGACAAAAAAGCTTAGAAAATCTGATCAGGATTCTGCTGCATTCAGTGATAAAAAGGGAGACTCCTTCGTCCCAAATATAGAGGCTTTTTTGAAGATGGTCCCAAATATAGAGTTTAAACATTTCGATATGACATCCTCCAATCAAACATTGTTGAACAATGATGCTCTTCTTGATTGCATGCAGGGAGCCCGGCACCGTCTTTTTTCCACATCAACTTCTTCCAACTTTATGAATGATAAAAGCAATGGTTTCCTTGGGAACAATTCTACGGCACTGTTGAGTAATGTGTCAAGTGAGCCAAACAATCTTGGTCCTATATCTTTGGACTTGTCACCTCATAGCCATGATATTTCTAACTCTCTTGTGACAAAGTTTGCCGGTACTGACAACAGCAACACCAAGAAAGTTAGTCCTGGTTCATTTATGCTATTTGGTAAGATCATAAAACCTGTTGGAAGCGATTTTCAAGAAGTAGATATCATGGGAAATGATGATTGTAAAGGCTCCAATGAAATTGAAGGCATCAAACTTGCACAAAAATAG
Protein sequence

>MS.gene76589.t1

MSSQQPSRVEPEIWQCCAGSSVKIPKLYSRVYYFPLGHLEHICPSPNPNTLSLLGSSRPFILCTVSAVDLLADSCTDEVFVKLLLTPVTNNGVHEPQSPEVREDQDDGKKVVSYTKTLTPSDANNGGAFSVPVECAKLIFPPLDLNAEKPSQELSISDIHGKVWNFRHVYRGTPLRHLLTTDWSEFVDKKKLVGGDSLIFMKDSDGNISVGVRRQTKFGAAAKITEKSFTEALELADKNMAFEVVYYPMAKGWCNFVVDAKVVEDAMNIKWNLGGRIELSLKNFDSSKRCSKFEGTISALSAPNRPWRMLEVKWDEPKVSHVPERVSPWEVETISDIFALYPQFQPTKKLRKSDQDSAAFSDKKGDSFVPNIEAFLKMVPNIEFKHFDMTSSNQTLLNNDALLDCMQGARHRLFSTSTSSNFMNDKSNGFLGNNSTALLSNVSSEPNNLGPISLDLSPHSHDISNSLVTKFAGTDNSNTKKVSPGSFMLFGKIIKPVGSDFQEVDIMGNDDCKGSNEIEGIKLAQK