AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76633

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76633.t1 MTR_5g042030 88.095 294 29 3 1 293 1 289 1.95e-170 473
MS.gene76633.t1 MTR_4g082230 40.060 332 123 7 7 264 12 341 3.22e-71 225
MS.gene76633.t1 MTR_6g012690 62.581 155 55 1 5 156 10 164 2.12e-70 222
MS.gene76633.t1 MTR_4g082290 64.968 157 48 2 5 156 10 164 2.99e-70 223
MS.gene76633.t1 MTR_7g011170 59.877 162 65 0 5 166 10 171 3.93e-69 217
MS.gene76633.t1 MTR_2g011660 70.588 119 35 0 6 124 12 130 5.39e-61 197
MS.gene76633.t1 MTR_8g031360 58.974 156 62 2 5 158 11 166 2.20e-60 194
MS.gene76633.t1 MTR_4g091490 69.748 119 36 0 6 124 12 130 4.04e-60 195
MS.gene76633.t1 MTR_5g029840 66.935 124 41 0 5 128 10 133 1.42e-59 193
MS.gene76633.t1 MTR_3g074520 66.116 121 41 0 6 126 11 131 4.16e-59 192
MS.gene76633.t1 MTR_7g076740 56.410 156 66 2 6 159 11 166 1.45e-58 189
MS.gene76633.t1 MTR_4g478180 65.546 119 41 0 6 124 12 130 3.32e-57 187
MS.gene76633.t1 MTR_2g089620 68.908 119 37 0 6 124 11 129 6.07e-57 186
MS.gene76633.t1 MTR_1g085040 66.929 127 42 0 7 133 12 138 6.41e-57 187
MS.gene76633.t1 MTR_5g007370 63.636 121 44 0 6 126 11 131 3.25e-56 183
MS.gene76633.t1 MTR_1g085640 66.129 124 42 0 7 130 12 135 1.74e-55 184
MS.gene76633.t1 MTR_1g100653 51.163 172 72 3 6 176 11 171 2.00e-55 181
MS.gene76633.t1 MTR_7g110830 58.273 139 58 0 7 145 12 150 1.98e-54 181
MS.gene76633.t1 MTR_4g102380 63.866 119 43 0 5 123 10 128 2.69e-53 175
MS.gene76633.t1 MTR_4g073420 51.497 167 77 1 9 175 14 176 3.72e-53 175
MS.gene76633.t1 MTR_3g461490 61.667 120 46 0 7 126 12 131 5.00e-53 176
MS.gene76633.t1 MTR_7g111290 67.200 125 41 0 7 131 12 136 5.12e-53 177
MS.gene76633.t1 MTR_3g077110 53.416 161 58 2 7 167 12 155 2.11e-52 175
MS.gene76633.t1 MTR_8g095390 66.957 115 38 0 9 123 14 128 3.34e-52 174
MS.gene76633.t1 MTR_1g112760 63.636 121 44 0 7 127 13 133 3.99e-52 171
MS.gene76633.t1 MTR_2g064160 63.478 115 42 0 7 121 11 125 4.24e-52 173
MS.gene76633.t1 MTR_4g105130 64.957 117 41 0 7 123 12 128 4.58e-52 174
MS.gene76633.t1 MTR_5g078140 56.115 139 60 1 5 142 10 148 5.84e-51 171
MS.gene76633.t1 MTR_3g065440 63.115 122 45 0 5 126 10 131 1.35e-50 169
MS.gene76633.t1 MTR_5g079670 62.931 116 43 0 7 122 11 126 1.54e-50 166
MS.gene76633.t1 MTR_1g043080 67.290 107 35 0 6 112 11 117 3.23e-50 166
MS.gene76633.t1 MTR_3g097450 64.912 114 40 0 9 122 14 127 4.74e-50 167
MS.gene76633.t1 MTR_2g089450 67.593 108 35 0 6 113 11 118 1.12e-49 165
MS.gene76633.t1 MTR_1g076150 66.355 107 36 0 5 111 10 116 1.45e-49 165
MS.gene76633.t1 MTR_1g043050 67.290 107 35 0 6 112 11 117 2.30e-49 164
MS.gene76633.t1 MTR_7g115650 62.617 107 40 0 5 111 10 116 1.98e-48 160
MS.gene76633.t1 MTR_2g089420 46.000 200 88 5 6 204 10 190 2.03e-48 167
MS.gene76633.t1 MTR_0008s0390 65.421 107 37 0 6 112 12 118 2.58e-48 162
MS.gene76633.t1 MTR_4g485530 62.832 113 42 0 9 121 14 126 3.59e-48 159
MS.gene76633.t1 MTR_6g009430 56.303 119 52 0 7 125 12 130 3.80e-48 164
MS.gene76633.t1 MTR_7g096930 66.355 107 36 0 5 111 10 116 4.19e-48 162
MS.gene76633.t1 MTR_3g083540 57.983 119 50 0 5 123 39 157 4.32e-48 162
MS.gene76633.t1 MTR_0008s0470 64.486 107 38 0 6 112 12 118 5.93e-48 162
MS.gene76633.t1 MTR_2g067420 69.697 99 30 0 7 105 14 112 2.81e-47 161
MS.gene76633.t1 MTR_0251s0050 64.151 106 38 0 6 111 12 117 4.28e-47 159
MS.gene76633.t1 MTR_8g027345 61.864 118 40 1 1 113 1 118 8.40e-47 159
MS.gene76633.t1 MTR_3g039990 40.860 186 94 2 5 185 11 185 1.10e-46 159
MS.gene76633.t1 MTR_7g117730 61.682 107 41 0 5 111 10 116 7.04e-46 155
MS.gene76633.t1 MTR_2g099740 61.404 114 44 0 7 120 12 125 8.84e-46 159
MS.gene76633.t1 MTR_8g017440 60.177 113 45 0 7 119 12 124 1.64e-45 157
MS.gene76633.t1 MTR_0140s0030 58.879 107 44 0 5 111 11 117 4.96e-45 155
MS.gene76633.t1 MTR_0489s0020 58.879 107 44 0 5 111 11 117 4.96e-45 155
MS.gene76633.t1 MTR_7g087130 56.410 117 49 1 5 119 10 126 5.45e-45 155
MS.gene76633.t1 MTR_4g125520 54.745 137 53 1 6 142 11 138 6.77e-45 154
MS.gene76633.t1 MTR_7g010210 58.491 106 44 0 6 111 11 116 9.26e-45 154
MS.gene76633.t1 MTR_7g010210 58.491 106 44 0 6 111 11 116 9.36e-45 153
MS.gene76633.t1 MTR_8g098860 61.905 105 40 0 7 111 12 116 1.24e-44 154
MS.gene76633.t1 MTR_8g017540 60.177 113 45 0 7 119 58 170 1.60e-44 155
MS.gene76633.t1 MTR_4g065017 53.237 139 65 0 7 145 17 155 1.76e-44 154
MS.gene76633.t1 MTR_2g097910 57.031 128 54 1 7 134 20 146 2.18e-44 153
MS.gene76633.t1 MTR_8g017500 52.174 138 60 1 7 138 12 149 9.61e-44 152
MS.gene76633.t1 MTR_4g057635 59.483 116 45 2 7 121 12 126 1.71e-43 151
MS.gene76633.t1 MTR_4g121460 59.813 107 43 0 5 111 10 116 2.05e-43 151
MS.gene76633.t1 MTR_6g012180 61.000 100 39 0 6 105 11 110 3.55e-43 150
MS.gene76633.t1 MTR_1g100667 59.130 115 46 1 8 122 14 127 4.58e-43 149
MS.gene76633.t1 MTR_5g010020 63.636 99 36 0 7 105 12 110 8.04e-43 150
MS.gene76633.t1 MTR_1g017140 46.951 164 77 4 7 169 12 166 8.87e-43 150
MS.gene76633.t1 MTR_8g017340 60.526 114 44 1 7 119 12 125 1.06e-42 153
MS.gene76633.t1 MTR_2g034790 58.879 107 44 0 5 111 10 116 2.36e-42 148
MS.gene76633.t1 MTR_3g028740 62.857 105 39 0 7 111 22 126 3.71e-42 148
MS.gene76633.t1 MTR_1g017000 53.226 124 54 3 7 129 12 132 5.10e-42 145
MS.gene76633.t1 MTR_0063s0090 62.136 103 39 0 6 108 11 113 6.71e-42 144
MS.gene76633.t1 MTR_5g014990 59.813 107 42 1 7 112 12 118 7.05e-42 146
MS.gene76633.t1 MTR_0008s0280 59.615 104 42 0 6 109 11 114 1.74e-41 143
MS.gene76633.t1 MTR_3g103570 57.944 107 44 1 7 112 12 118 2.04e-41 146
MS.gene76633.t1 MTR_2g095520 65.000 100 34 1 7 105 12 111 2.81e-41 145
MS.gene76633.t1 MTR_8g017350 59.649 114 45 1 7 119 12 125 4.77e-41 150
MS.gene76633.t1 MTR_6g055910 59.434 106 43 0 8 113 15 120 7.15e-41 143
MS.gene76633.t1 MTR_3g052450 60.000 110 43 1 7 116 40 148 1.11e-40 148
MS.gene76633.t1 MTR_3g052430 60.000 110 43 1 7 116 41 149 1.58e-40 147
MS.gene76633.t1 MTR_8g017390 60.748 107 41 1 7 112 12 118 2.50e-40 146
MS.gene76633.t1 MTR_7g102110 55.963 109 47 1 7 114 12 120 6.82e-40 140
MS.gene76633.t1 MTR_4g097570 61.616 99 37 1 7 104 12 110 2.40e-39 139
MS.gene76633.t1 MTR_1g073170 53.333 120 52 1 8 127 21 136 4.99e-39 137
MS.gene76633.t1 MTR_8g042410 55.963 109 48 0 2 110 32 140 2.35e-38 142
MS.gene76633.t1 MTR_4g100720 56.731 104 45 0 7 110 13 116 2.63e-38 133
MS.gene76633.t1 MTR_3g011610 54.545 110 49 1 7 116 37 145 2.81e-38 141
MS.gene76633.t1 MTR_6g090405 56.075 107 46 1 7 112 12 118 3.54e-38 135
MS.gene76633.t1 MTR_1g110460 52.252 111 53 0 7 117 26 136 4.28e-38 137
MS.gene76633.t1 MTR_7g035075 57.143 105 45 0 7 111 14 118 4.51e-38 134
MS.gene76633.t1 MTR_5g079120 48.000 125 64 1 1 124 55 179 6.75e-38 136
MS.gene76633.t1 MTR_8g020490 59.223 103 42 0 9 111 10 112 7.18e-38 134
MS.gene76633.t1 MTR_4g097570 61.000 100 37 2 7 104 12 111 8.32e-38 135
MS.gene76633.t1 MTR_1g062940 57.143 105 45 0 7 111 6 110 9.69e-38 133
MS.gene76633.t1 MTR_1g086510 52.679 112 53 0 6 117 20 131 1.11e-37 134
MS.gene76633.t1 MTR_5g078860 53.571 112 52 0 1 112 1 112 1.60e-37 135
MS.gene76633.t1 MTR_1g045610 56.311 103 45 0 8 110 22 124 2.06e-37 133
MS.gene76633.t1 MTR_5g078800 52.679 112 53 0 1 112 1 112 2.43e-37 133
MS.gene76633.t1 MTR_0193s0090 48.413 126 64 1 1 126 1 125 2.72e-37 132
MS.gene76633.t1 MTR_1g021230 57.692 104 44 0 7 110 57 160 2.92e-37 137
MS.gene76633.t1 MTR_7g017260 32.069 290 142 9 1 278 19 265 3.20e-37 133
MS.gene76633.t1 MTR_0247s0040 53.704 108 50 0 1 108 1 108 3.64e-37 130
MS.gene76633.t1 MTR_7g111290 69.892 93 28 0 39 131 2 94 4.54e-37 135
MS.gene76633.t1 MTR_5g079220 53.271 107 50 0 6 112 20 126 5.75e-37 133
MS.gene76633.t1 MTR_5g079290 50.000 112 56 0 1 112 11 122 6.91e-37 132
MS.gene76633.t1 MTR_6g006030 56.190 105 46 0 7 111 14 118 1.31e-36 130
MS.gene76633.t1 MTR_4g128670 58.000 100 41 1 7 105 12 111 1.76e-36 133
MS.gene76633.t1 MTR_3g045430 47.899 119 62 0 7 125 13 131 2.43e-36 132
MS.gene76633.t1 MTR_5g078910 50.000 112 56 0 1 112 1 112 1.29e-35 130
MS.gene76633.t1 MTR_0197s0010 55.000 100 45 0 12 111 6 105 1.45e-35 128
MS.gene76633.t1 MTR_7g109320 60.748 107 42 0 5 111 10 116 1.98e-35 130
MS.gene76633.t1 MTR_2g088170 57.658 111 46 1 6 116 28 137 2.94e-35 132
MS.gene76633.t1 MTR_3g101290 60.784 102 39 1 9 110 37 137 4.16e-35 126
MS.gene76633.t1 MTR_1g086530 46.218 119 64 0 4 122 30 148 4.39e-35 128
MS.gene76633.t1 MTR_4g019370 53.659 123 55 2 9 131 38 158 5.17e-35 129
MS.gene76633.t1 MTR_5g016510 53.913 115 52 1 9 123 5 118 5.77e-35 129
MS.gene76633.t1 MTR_5g078950 50.926 108 53 0 1 108 1 108 5.89e-35 127
MS.gene76633.t1 MTR_4g094982 59.804 102 40 1 9 110 5 105 1.00e-34 127
MS.gene76633.t1 MTR_0001s0360 49.107 112 57 0 1 112 1 112 1.12e-34 126
MS.gene76633.t1 MTR_8g060940 51.402 107 52 0 1 107 1 107 2.81e-34 125
MS.gene76633.t1 MTR_5g062790 50.847 118 56 2 2 118 4 120 3.24e-34 126
MS.gene76633.t1 MTR_5g007300 67.949 78 25 0 6 83 63 140 4.61e-34 121
MS.gene76633.t1 MTR_4g063100 50.485 103 51 0 8 110 8 110 5.45e-34 124
MS.gene76633.t1 MTR_5g088080 51.786 112 52 2 8 118 13 123 5.89e-34 125
MS.gene76633.t1 MTR_5g088150 51.786 112 52 2 8 118 13 123 5.89e-34 125
MS.gene76633.t1 MTR_5g488210 51.786 112 52 2 8 118 13 123 5.89e-34 125
MS.gene76633.t1 MTR_5g088640 51.786 112 52 2 8 118 13 123 7.04e-34 125
MS.gene76633.t1 MTR_5g488170 51.786 112 52 2 8 118 13 123 1.11e-33 123
MS.gene76633.t1 MTR_2g033170 51.327 113 55 0 5 117 22 134 1.94e-33 125
MS.gene76633.t1 MTR_5g078930 54.455 101 46 0 8 108 10 110 3.61e-33 121
MS.gene76633.t1 MTR_2g096380 45.763 118 61 1 7 121 6 123 8.65e-33 120
MS.gene76633.t1 MTR_6g015455 39.181 171 99 2 9 179 5 170 2.64e-32 126
MS.gene76633.t1 MTR_4g029540 47.656 128 63 3 7 133 10 134 3.95e-32 120
MS.gene76633.t1 MTR_1g083630 43.333 150 75 2 2 141 7 156 1.33e-31 124
MS.gene76633.t1 MTR_4g123040 46.667 120 64 0 5 124 22 141 2.01e-31 119
MS.gene76633.t1 MTR_8g006470 48.624 109 54 2 7 114 10 117 8.34e-31 117
MS.gene76633.t1 MTR_5g088610 47.458 118 60 2 2 118 4 120 2.23e-29 114
MS.gene76633.t1 MTR_5g082910 53.535 99 45 1 9 107 19 116 1.34e-27 108
MS.gene76633.t1 MTR_7g061330 49.524 105 52 1 7 111 111 214 1.77e-27 112
MS.gene76633.t1 MTR_7g461410 49.524 105 52 1 7 111 111 214 1.77e-27 112
MS.gene76633.t1 MTR_7g061330 49.524 105 52 1 7 111 75 178 2.70e-27 111
MS.gene76633.t1 MTR_6g055910 62.162 74 28 0 40 113 18 91 1.87e-26 104
MS.gene76633.t1 MTR_5g070020 45.192 104 56 1 7 110 120 222 5.51e-26 105
MS.gene76633.t1 MTR_3g463400 42.991 107 60 1 4 110 128 233 6.26e-26 106
MS.gene76633.t1 MTR_7g037260 33.824 204 119 5 3 203 139 329 1.12e-25 104
MS.gene76633.t1 MTR_1g026870 45.714 105 56 1 7 111 83 186 2.19e-25 106
MS.gene76633.t1 MTR_3g110028 43.810 105 58 1 7 111 83 186 2.26e-25 106
MS.gene76633.t1 MTR_3g077650 44.144 111 59 2 1 110 173 281 6.46e-25 103
MS.gene76633.t1 MTR_4g063100 55.556 72 32 0 39 110 10 81 8.52e-25 99.8
MS.gene76633.t1 MTR_5g049190 49.474 95 47 1 9 103 19 112 1.32e-24 99.8
MS.gene76633.t1 MTR_4g082040 46.078 102 54 1 9 110 105 205 1.69e-24 102
MS.gene76633.t1 MTR_5g041570 44.660 103 56 1 9 111 134 235 2.77e-24 102
MS.gene76633.t1 MTR_4g128190 39.344 183 80 6 6 174 10 175 3.75e-24 98.2
MS.gene76633.t1 MTR_6g027340 43.103 116 64 2 9 124 16 129 4.29e-24 97.4
MS.gene76633.t1 MTR_6g027360 42.373 118 66 2 7 124 76 191 9.37e-24 98.6
MS.gene76633.t1 MTR_4g105660 45.794 107 51 2 7 110 178 280 1.38e-23 99.8
MS.gene76633.t1 MTR_7g451170 44.118 102 56 1 9 110 191 291 1.42e-23 99.8
MS.gene76633.t1 MTR_6g074860 47.423 97 48 2 9 104 4 98 2.36e-23 96.3
MS.gene76633.t1 MTR_3g089045 48.958 96 48 1 9 104 16 110 2.88e-23 97.1
MS.gene76633.t1 MTR_2g096380 52.778 72 34 0 39 110 19 90 1.19e-22 93.6
MS.gene76633.t1 MTR_6g027370 47.368 95 49 1 9 103 99 192 1.87e-22 95.9
MS.gene76633.t1 MTR_0023s0210 49.398 83 42 0 1 83 1 83 1.93e-22 89.4
MS.gene76633.t1 MTR_7g086960 45.098 102 55 1 9 110 89 189 2.10e-22 95.9
MS.gene76633.t1 MTR_4g088015 42.574 101 57 1 9 109 221 320 4.58e-22 95.9
MS.gene76633.t1 MTR_7g035350 46.809 94 49 1 12 105 228 320 5.35e-22 95.5
MS.gene76633.t1 MTR_7g037130 33.333 204 120 6 3 203 139 329 1.41e-21 93.6
MS.gene76633.t1 MTR_1g085880 48.571 105 52 2 7 109 11 115 5.43e-21 88.6
MS.gene76633.t1 MTR_5g010650 29.091 275 145 8 7 234 108 379 6.11e-21 92.8
MS.gene76633.t1 MTR_7g450950 38.400 125 67 3 9 133 157 271 2.10e-20 90.1
MS.gene76633.t1 MTR_1g085770 48.571 105 52 2 7 109 11 115 2.36e-20 89.4
MS.gene76633.t1 MTR_1g057980 44.444 99 54 1 7 105 78 175 2.36e-20 89.4
MS.gene76633.t1 MTR_7g061550 44.211 95 51 1 12 104 10 104 1.29e-17 82.4
MS.gene76633.t1 MTR_5g038910 37.374 99 61 1 12 110 29 126 4.01e-16 78.6
MS.gene76633.t1 MTR_5g038910 33.898 118 77 1 12 129 29 145 4.18e-16 78.2
MS.gene76633.t1 MTR_8g468380 34.343 99 64 1 12 110 25 122 1.40e-14 73.9
MS.gene76633.t1 MTR_1g008970 37.143 105 46 2 7 111 108 192 2.11e-12 66.2
MS.gene76633.t1 MTR_8g017480 60.976 41 16 0 7 47 12 52 1.06e-11 59.3
MS.gene76633.t1 MTR_6g055910 55.102 49 22 0 65 113 2 50 2.44e-11 62.4
MS.gene76633.t1 MTR_7g115550 34.483 87 56 1 7 93 5 90 5.24e-11 63.5
MS.gene76633.t1 MTR_7g115550 34.483 87 56 1 7 93 5 90 6.50e-11 63.5
MS.gene76633.t1 MTR_6g080360 33.333 99 65 1 10 107 427 525 9.28e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76633.t1 AT5G15310 65.359 153 52 1 5 156 10 162 2.51e-71 223
MS.gene76633.t1 AT5G15310 65.359 153 52 1 5 156 10 162 3.16e-71 220
MS.gene76633.t1 AT5G15310 65.359 153 52 1 5 156 10 162 3.58e-71 222
MS.gene76633.t1 AT3G01140 64.474 152 53 1 6 156 11 162 2.89e-70 221
MS.gene76633.t1 AT3G01140 64.474 152 53 1 6 156 54 205 9.62e-70 221
MS.gene76633.t1 AT4G05100 70.588 119 35 0 6 124 12 130 1.79e-61 197
MS.gene76633.t1 AT3G02940 67.742 124 40 0 6 129 11 134 2.00e-61 197
MS.gene76633.t1 AT3G61250 55.844 154 67 1 5 158 10 162 2.11e-61 197
MS.gene76633.t1 AT3G02940 67.742 124 40 0 6 129 11 134 3.77e-61 197
MS.gene76633.t1 AT3G02940 67.742 124 40 0 6 129 11 134 3.77e-61 197
MS.gene76633.t1 AT4G21440 69.748 119 36 0 6 124 11 129 2.06e-60 196
MS.gene76633.t1 AT4G28110 69.748 119 36 0 6 124 11 129 1.40e-59 191
MS.gene76633.t1 AT5G10280 66.942 121 40 0 6 126 11 131 3.33e-59 192
MS.gene76633.t1 AT5G16770 65.323 124 43 0 6 129 11 134 7.31e-59 191
MS.gene76633.t1 AT5G16770 65.323 124 43 0 6 129 11 134 7.31e-59 191
MS.gene76633.t1 AT5G65230 65.873 126 43 0 2 127 7 132 8.00e-59 191
MS.gene76633.t1 AT5G16770 65.323 124 43 0 6 129 11 134 1.52e-58 191
MS.gene76633.t1 AT5G16770 65.323 124 43 0 6 129 11 134 1.52e-58 191
MS.gene76633.t1 AT5G54230 68.333 120 38 0 7 126 12 131 1.90e-58 190
MS.gene76633.t1 AT1G34670 47.030 202 90 3 6 207 11 195 2.24e-58 191
MS.gene76633.t1 AT5G61420 63.158 133 49 0 6 138 11 143 2.76e-58 191
MS.gene76633.t1 AT1G57560 61.972 142 48 1 7 142 12 153 3.36e-58 189
MS.gene76633.t1 AT1G57560 66.667 126 42 0 7 132 12 137 1.53e-57 186
MS.gene76633.t1 AT4G17785 65.574 122 42 0 6 127 12 133 2.06e-57 188
MS.gene76633.t1 AT4G17785 65.574 122 42 0 6 127 12 133 3.22e-57 188
MS.gene76633.t1 AT5G60890 61.481 135 52 0 6 140 11 145 4.89e-57 185
MS.gene76633.t1 AT1G74080 68.333 120 38 0 3 122 8 127 1.09e-56 186
MS.gene76633.t1 AT1G18570 67.797 118 38 0 5 122 11 128 2.86e-56 185
MS.gene76633.t1 AT5G07700 64.800 125 44 0 6 130 11 135 3.39e-56 184
MS.gene76633.t1 AT5G07700 64.800 125 44 0 6 130 11 135 3.39e-56 184
MS.gene76633.t1 AT5G07690 64.516 124 44 0 6 129 11 134 1.19e-55 183
MS.gene76633.t1 AT5G26660 69.231 117 36 0 7 123 12 128 7.81e-55 181
MS.gene76633.t1 AT1G09540 64.062 128 46 0 7 134 12 139 1.36e-54 181
MS.gene76633.t1 AT4G22680 66.387 119 40 0 5 123 10 128 2.53e-54 177
MS.gene76633.t1 AT1G74430 60.163 123 49 0 6 128 11 133 4.95e-54 177
MS.gene76633.t1 AT4G38620 66.087 115 39 0 9 123 14 128 5.51e-54 177
MS.gene76633.t1 AT4G12350 65.546 119 41 0 5 123 10 128 6.86e-54 177
MS.gene76633.t1 AT4G34990 66.957 115 38 0 9 123 14 128 7.61e-54 176
MS.gene76633.t1 AT4G01680 67.241 116 38 0 7 122 12 127 3.61e-53 174
MS.gene76633.t1 AT1G18710 62.712 118 44 0 6 123 11 128 1.15e-52 173
MS.gene76633.t1 AT3G23250 57.353 136 54 1 5 140 10 141 1.18e-52 174
MS.gene76633.t1 AT4G01680 67.241 116 38 0 7 122 12 127 1.31e-52 175
MS.gene76633.t1 AT3G13540 53.285 137 64 0 5 141 21 157 1.33e-52 172
MS.gene76633.t1 AT5G16600 65.289 121 42 0 5 125 10 130 1.46e-52 175
MS.gene76633.t1 AT2G16720 55.797 138 61 0 7 144 12 149 3.01e-52 172
MS.gene76633.t1 AT5G56110 60.833 120 47 0 7 126 12 131 3.87e-52 174
MS.gene76633.t1 AT4G09460 64.035 114 41 0 9 122 14 127 2.43e-51 169
MS.gene76633.t1 AT3G12720 62.609 115 43 0 7 121 22 136 5.88e-51 170
MS.gene76633.t1 AT1G22640 62.069 116 44 0 7 122 12 127 1.67e-50 167
MS.gene76633.t1 AT1G66230 61.157 121 47 0 5 125 10 130 3.81e-50 167
MS.gene76633.t1 AT1G06180 70.093 107 32 0 5 111 10 116 4.30e-50 166
MS.gene76633.t1 AT1G35515 56.061 132 54 1 7 134 12 143 5.73e-50 164
MS.gene76633.t1 AT1G79180 56.618 136 58 1 7 141 14 149 4.03e-49 165
MS.gene76633.t1 AT4G01680 60.938 128 38 1 7 122 12 139 4.10e-49 166
MS.gene76633.t1 AT2G31180 66.355 107 36 0 5 111 10 116 4.58e-49 163
MS.gene76633.t1 AT1G56160 67.619 105 34 0 7 111 14 118 1.23e-48 164
MS.gene76633.t1 AT1G16490 55.474 137 58 1 7 140 14 150 3.78e-48 162
MS.gene76633.t1 AT5G62470 49.333 150 73 2 5 154 10 156 1.14e-47 163
MS.gene76633.t1 AT5G62320 57.600 125 46 1 5 122 11 135 1.81e-47 159
MS.gene76633.t1 AT5G14340 50.350 143 66 1 5 142 22 164 6.49e-47 159
MS.gene76633.t1 AT3G47600 59.091 110 45 0 5 114 10 119 1.14e-46 160
MS.gene76633.t1 AT5G35550 58.462 130 50 1 7 136 14 139 2.02e-46 157
MS.gene76633.t1 AT1G63910 58.974 117 48 0 7 123 12 128 1.07e-45 158
MS.gene76633.t1 AT1G08810 60.748 107 42 0 5 111 10 116 1.56e-45 155
MS.gene76633.t1 AT1G74650 59.091 110 45 0 5 114 10 119 1.87e-45 156
MS.gene76633.t1 AT5G62470 48.667 150 73 3 5 154 10 155 3.71e-45 156
MS.gene76633.t1 AT3G13890 63.208 106 39 0 7 112 12 117 9.74e-45 155
MS.gene76633.t1 AT3G12820 61.682 107 41 0 7 113 14 120 3.32e-44 150
MS.gene76633.t1 AT3G28910 56.250 112 49 0 6 117 11 122 4.18e-44 153
MS.gene76633.t1 AT5G12870 62.963 108 40 0 7 114 18 125 7.95e-44 151
MS.gene76633.t1 AT3G28470 57.983 119 50 0 7 125 12 130 3.86e-43 150
MS.gene76633.t1 AT1G79180 45.562 169 58 2 7 141 14 182 1.49e-42 149
MS.gene76633.t1 AT3G13890 58.261 115 39 1 7 112 12 126 8.87e-42 148
MS.gene76633.t1 AT5G49330 56.034 116 46 1 1 111 1 116 1.01e-41 147
MS.gene76633.t1 AT5G23000 59.813 107 42 1 7 112 12 118 1.78e-41 146
MS.gene76633.t1 AT3G62610 58.879 107 44 0 5 111 10 116 3.31e-41 145
MS.gene76633.t1 AT3G08500 62.857 105 39 0 7 111 30 134 4.31e-41 145
MS.gene76633.t1 AT5G57620 58.879 107 43 1 7 112 12 118 1.51e-40 144
MS.gene76633.t1 AT2G36890 56.034 116 50 1 7 121 12 127 1.60e-40 143
MS.gene76633.t1 AT5G65790 59.813 107 42 1 7 112 12 118 1.68e-40 144
MS.gene76633.t1 AT5G14750 55.769 104 46 0 8 111 17 120 1.92e-40 140
MS.gene76633.t1 AT2G36890 56.034 116 50 1 7 121 53 168 3.29e-40 143
MS.gene76633.t1 AT5G40350 56.881 109 47 0 7 115 17 125 3.60e-40 139
MS.gene76633.t1 AT4G37780 55.046 109 48 1 5 112 10 118 3.65e-40 142
MS.gene76633.t1 AT3G49690 58.879 107 43 1 7 112 12 118 3.81e-40 142
MS.gene76633.t1 AT4G26930 51.181 127 59 2 7 133 19 142 8.70e-40 143
MS.gene76633.t1 AT5G40330 54.808 104 47 0 8 111 13 116 1.48e-39 138
MS.gene76633.t1 AT5G55020 58.182 110 45 1 7 116 26 134 1.95e-39 144
MS.gene76633.t1 AT2G26960 57.273 110 46 1 7 116 20 128 2.18e-39 143
MS.gene76633.t1 AT4G25560 56.604 106 46 0 8 113 11 116 2.98e-39 139
MS.gene76633.t1 AT2G47460 56.075 107 47 0 5 111 10 116 4.20e-39 141
MS.gene76633.t1 AT5G26660 72.093 86 24 0 38 123 12 97 5.74e-39 139
MS.gene76633.t1 AT5G52260 60.377 106 42 0 8 113 13 118 7.84e-39 137
MS.gene76633.t1 AT5G06100 58.095 105 44 0 6 110 31 135 1.47e-38 141
MS.gene76633.t1 AT2G32460 53.846 117 53 1 6 122 17 132 3.03e-38 141
MS.gene76633.t1 AT2G32460 53.846 117 53 1 6 122 5 120 3.20e-38 140
MS.gene76633.t1 AT3G48920 55.882 102 45 0 8 109 19 120 3.24e-38 135
MS.gene76633.t1 AT5G06100 58.095 105 44 0 6 110 31 135 4.11e-38 141
MS.gene76633.t1 AT5G06100 58.095 105 44 0 6 110 31 135 4.11e-38 141
MS.gene76633.t1 AT5G06100 58.095 105 44 0 6 110 31 135 4.11e-38 141
MS.gene76633.t1 AT5G06100 58.095 105 44 0 6 110 31 135 4.11e-38 141
MS.gene76633.t1 AT3G27920 52.381 105 50 0 8 112 15 119 5.37e-38 134
MS.gene76633.t1 AT3G30210 57.692 104 44 0 6 109 26 129 7.88e-38 135
MS.gene76633.t1 AT3G27810 52.632 114 54 0 7 120 20 133 1.03e-37 133
MS.gene76633.t1 AT3G53200 56.731 104 45 0 7 110 9 112 1.04e-37 134
MS.gene76633.t1 AT3G24310 57.143 105 45 0 6 110 17 121 1.09e-37 134
MS.gene76633.t1 AT3G01530 55.238 105 47 0 7 111 25 129 1.59e-37 132
MS.gene76633.t1 AT3G11440 56.731 104 45 0 7 110 41 144 1.64e-37 139
MS.gene76633.t1 AT4G13480 57.282 103 44 0 8 110 7 109 3.45e-37 133
MS.gene76633.t1 AT3G11440 56.731 104 45 0 7 110 41 144 3.50e-37 139
MS.gene76633.t1 AT3G11440 56.731 104 45 0 7 110 41 144 3.50e-37 139
MS.gene76633.t1 AT3G11440 56.731 104 45 0 7 110 41 144 3.50e-37 139
MS.gene76633.t1 AT1G48000 53.333 105 49 0 5 109 30 134 4.18e-37 132
MS.gene76633.t1 AT5G52600 55.769 104 46 0 7 110 12 115 8.78e-37 130
MS.gene76633.t1 AT1G25340 48.696 115 59 0 8 122 19 133 1.17e-36 132
MS.gene76633.t1 AT2G47190 49.550 111 56 0 7 117 20 130 1.31e-36 132
MS.gene76633.t1 AT1G68320 47.414 116 61 0 7 122 19 134 5.02e-35 128
MS.gene76633.t1 AT5G35550 51.938 129 56 2 40 168 50 172 1.58e-34 126
MS.gene76633.t1 AT3G06490 48.387 124 64 0 1 124 13 136 3.93e-34 127
MS.gene76633.t1 AT1G66370 51.429 105 51 0 6 110 7 111 5.41e-34 124
MS.gene76633.t1 AT2G23290 58.824 102 41 1 9 110 13 113 1.95e-33 124
MS.gene76633.t1 AT4G37260 58.824 102 41 1 9 110 13 113 2.77e-33 124
MS.gene76633.t1 AT5G49620 45.968 124 67 0 1 124 20 143 1.06e-32 122
MS.gene76633.t1 AT3G46130 48.182 110 57 0 1 110 3 112 1.78e-32 120
MS.gene76633.t1 AT5G59780 49.515 103 52 0 8 110 9 111 2.12e-32 120
MS.gene76633.t1 AT3G60460 51.376 109 51 2 7 114 11 118 2.19e-32 121
MS.gene76633.t1 AT2G39880 57.843 102 42 1 9 110 50 150 2.83e-32 122
MS.gene76633.t1 AT5G67300 54.902 102 45 1 9 110 6 106 3.97e-32 121
MS.gene76633.t1 AT1G66380 54.286 105 48 0 6 110 7 111 6.47e-32 115
MS.gene76633.t1 AT1G25340 46.087 115 57 1 8 122 19 128 8.26e-32 119
MS.gene76633.t1 AT1G25340 46.087 115 57 1 8 122 19 128 2.03e-31 119
MS.gene76633.t1 AT2G26950 49.091 110 55 1 7 116 16 124 2.30e-31 120
MS.gene76633.t1 AT3G09230 55.769 104 45 1 9 112 55 157 2.81e-31 120
MS.gene76633.t1 AT3G50060 52.941 102 47 1 9 110 6 106 4.37e-31 118
MS.gene76633.t1 AT1G56650 46.565 131 62 1 6 128 7 137 8.88e-31 116
MS.gene76633.t1 AT1G66390 52.381 105 50 0 6 110 7 111 3.59e-30 114
MS.gene76633.t1 AT3G55730 56.863 102 43 1 9 110 56 156 6.73e-30 117
MS.gene76633.t1 AT3G47600 49.167 120 55 3 40 154 39 157 1.06e-29 115
MS.gene76633.t1 AT3G12820 69.014 71 22 0 43 113 2 72 1.83e-29 111
MS.gene76633.t1 AT5G49620 41.304 138 67 1 1 124 20 157 4.07e-29 113
MS.gene76633.t1 AT5G14750 59.740 77 28 1 35 111 13 86 1.19e-28 108
MS.gene76633.t1 AT5G40350 61.842 76 29 0 40 115 5 80 1.20e-28 108
MS.gene76633.t1 AT3G53200 65.753 73 25 0 38 110 7 79 2.60e-28 108
MS.gene76633.t1 AT5G58850 44.800 125 63 2 7 131 103 221 3.32e-28 112
MS.gene76633.t1 AT1G22640 65.714 70 24 0 53 122 1 70 8.11e-28 107
MS.gene76633.t1 AT1G71030 54.217 83 38 0 46 128 5 87 1.90e-27 105
MS.gene76633.t1 AT1G71030 54.217 83 38 0 46 128 19 101 2.83e-27 105
MS.gene76633.t1 AT5G11050 32.035 231 130 5 9 239 105 308 1.19e-26 108
MS.gene76633.t1 AT3G27810 55.556 81 36 0 40 120 4 84 1.42e-26 103
MS.gene76633.t1 AT5G02320 46.667 105 55 1 7 111 125 228 4.37e-26 107
MS.gene76633.t1 AT5G02320 46.667 105 55 1 7 111 125 228 4.37e-26 107
MS.gene76633.t1 AT5G02320 46.667 105 55 1 7 111 65 168 4.76e-26 107
MS.gene76633.t1 AT4G32730 46.667 105 55 1 7 111 85 188 8.13e-26 107
MS.gene76633.t1 AT4G32730 46.667 105 55 1 7 111 85 188 8.13e-26 107
MS.gene76633.t1 AT4G32730 46.667 105 55 1 7 111 85 188 8.13e-26 107
MS.gene76633.t1 AT4G32730 46.667 105 55 1 7 111 85 188 8.13e-26 107
MS.gene76633.t1 AT4G32730 46.667 105 55 1 7 111 85 188 9.96e-26 107
MS.gene76633.t1 AT5G40360 45.714 105 55 2 7 111 156 258 1.02e-25 105
MS.gene76633.t1 AT1G18960 40.945 127 71 3 1 126 1 124 1.20e-25 103
MS.gene76633.t1 AT3G09370 47.222 108 48 2 7 110 133 235 1.32e-25 106
MS.gene76633.t1 AT3G09370 47.222 108 48 2 7 110 141 243 1.45e-25 106
MS.gene76633.t1 AT3G09370 47.222 108 48 2 7 110 128 230 1.52e-25 106
MS.gene76633.t1 AT4G18770 45.714 105 56 1 7 111 215 318 2.86e-25 104
MS.gene76633.t1 AT1G69560 43.636 110 61 1 2 111 100 208 3.31e-25 103
MS.gene76633.t1 AT1G69560 43.636 110 61 1 2 111 116 224 4.22e-25 103
MS.gene76633.t1 AT1G17950 45.098 102 55 1 9 110 5 105 6.71e-25 100
MS.gene76633.t1 AT5G59780 56.164 73 32 0 38 110 18 90 9.34e-25 99.4
MS.gene76633.t1 AT3G27785 41.964 112 64 1 2 113 182 292 1.20e-24 103
MS.gene76633.t1 AT1G26780 47.115 104 54 1 7 110 96 198 1.30e-24 100
MS.gene76633.t1 AT1G26780 47.115 104 54 1 7 110 96 198 1.67e-24 101
MS.gene76633.t1 AT3G46130 56.164 73 32 0 38 110 18 90 2.16e-24 99.0
MS.gene76633.t1 AT3G46130 55.556 72 32 0 39 110 9 80 5.49e-24 97.4
MS.gene76633.t1 AT5G11510 40.952 105 61 1 7 111 79 182 7.82e-24 102
MS.gene76633.t1 AT5G11510 40.952 105 61 1 7 111 79 182 7.82e-24 102
MS.gene76633.t1 AT5G11510 40.952 105 61 1 7 111 79 182 7.82e-24 102
MS.gene76633.t1 AT5G11510 40.952 105 61 1 7 111 79 182 1.02e-23 101
MS.gene76633.t1 AT5G11510 40.952 105 61 1 7 111 79 182 1.09e-23 101
MS.gene76633.t1 AT5G17800 47.059 102 53 1 9 110 93 193 1.15e-23 98.6
MS.gene76633.t1 AT3G23250 54.545 88 36 1 53 140 1 84 4.68e-23 95.1
MS.gene76633.t1 AT1G73410 46.078 102 54 1 9 110 6 106 5.85e-23 95.1
MS.gene76633.t1 AT1G73410 46.078 102 54 1 9 110 6 106 7.69e-23 94.0
MS.gene76633.t1 AT4G33450 41.748 103 59 1 8 110 18 119 1.15e-22 94.7
MS.gene76633.t1 AT5G15310 55.696 79 34 1 79 156 5 83 2.31e-22 93.6
MS.gene76633.t1 AT3G29020 43.269 104 56 2 9 111 65 166 7.30e-22 92.0
MS.gene76633.t1 AT3G29020 43.269 104 56 2 9 111 67 168 2.06e-21 92.4
MS.gene76633.t1 AT1G66380 52.439 82 39 0 6 87 7 88 2.60e-21 87.0
MS.gene76633.t1 AT5G39700 44.231 104 56 2 10 113 57 158 4.59e-21 89.0
MS.gene76633.t1 AT1G66380 59.722 72 29 0 39 110 7 78 6.34e-21 85.9
MS.gene76633.t1 AT5G61420 61.905 63 24 0 76 138 2 64 2.99e-19 85.9
MS.gene76633.t1 AT4G00540 42.593 108 58 2 7 111 101 207 3.25e-19 87.4
MS.gene76633.t1 AT4G00540 42.593 108 58 2 7 111 99 205 5.35e-19 87.0
MS.gene76633.t1 AT5G14750 55.932 59 26 0 53 111 1 59 7.36e-19 81.6
MS.gene76633.t1 AT5G14750 55.932 59 26 0 53 111 1 59 7.36e-19 81.6
MS.gene76633.t1 AT2G25230 43.000 100 55 2 12 111 29 126 1.44e-18 83.2
MS.gene76633.t1 AT2G02820 40.404 99 58 1 12 110 33 130 3.22e-18 84.0
MS.gene76633.t1 AT2G02820 40.404 99 58 1 12 110 33 130 4.70e-18 84.3
MS.gene76633.t1 AT1G14350 36.066 122 69 2 12 133 28 140 5.10e-18 84.0
MS.gene76633.t1 AT1G14350 36.066 122 69 2 12 133 28 140 5.10e-18 84.0
MS.gene76633.t1 AT2G02820 40.404 99 58 1 12 110 33 130 5.94e-18 84.0
MS.gene76633.t1 AT2G37630 45.263 95 50 1 12 104 7 101 1.02e-17 82.8
MS.gene76633.t1 AT4G28110 71.429 42 12 0 83 124 4 45 1.31e-15 74.3
MS.gene76633.t1 AT3G18100 39.583 96 57 1 8 103 497 591 9.76e-15 74.7
MS.gene76633.t1 AT3G18100 39.583 96 57 1 8 103 545 639 1.04e-14 74.7
MS.gene76633.t1 AT5G40430 36.190 105 64 3 7 111 52 153 1.20e-14 72.8
MS.gene76633.t1 AT3G18100 39.583 96 57 1 8 103 384 478 1.55e-14 74.3
MS.gene76633.t1 AT3G18100 39.583 96 57 1 8 103 332 426 1.66e-14 73.9
MS.gene76633.t1 AT4G25560 58.333 48 20 0 66 113 3 50 7.70e-13 67.0
MS.gene76633.t1 AT1G74430 49.123 57 29 0 72 128 8 64 2.15e-12 65.5
MS.gene76633.t1 AT1G74650 61.905 42 16 0 73 114 2 43 3.83e-12 65.5
MS.gene76633.t1 AT5G14340 46.154 65 30 1 83 142 10 74 1.66e-11 62.4
MS.gene76633.t1 AT1G09770 35.632 87 55 1 7 93 5 90 2.52e-11 64.7
MS.gene76633.t1 AT1G14350 37.349 83 44 1 51 133 23 97 2.58e-11 63.9
MS.gene76633.t1 AT1G14350 37.349 83 44 1 51 133 23 97 2.58e-11 63.9
MS.gene76633.t1 AT3G28910 55.556 45 20 0 73 117 2 46 3.66e-11 62.4

Find 54 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAGCTTCTTGTCTTCTTT+TGG 0.163262 5.1:-31700962 None:intergenic
TTGTTGTTGTTGTTAGATTT+TGG 0.239668 5.1:-31702554 None:intergenic
TTCATAGACTTCAATGGAAA+TGG 0.323459 5.1:+31703007 MS.gene76633:CDS
TGCTGTAATGTTACCTGCTC+TGG 0.350524 5.1:-31701032 None:intergenic
CTCAACATGGCCATAGAAAC+TGG 0.356479 5.1:+31700996 MS.gene76633:CDS
GCAAAGAATGCCAGTTTCTA+TGG 0.366432 5.1:-31701006 None:intergenic
CATTATCTGTTCTCCTTGGC+AGG 0.386660 5.1:-31702457 None:intergenic
GTAAGACAAGGAAGCTCATT+AGG 0.387716 5.1:-31702815 None:intergenic
ATTCAGCTTCATGCACTTCT+CGG 0.394016 5.1:+31701422 MS.gene76633:CDS
AAGAAAAGACTTATCAGAAT+GGG 0.406171 5.1:+31702509 MS.gene76633:CDS
GAAGGAAGATCATCAATGTT+AGG 0.409220 5.1:+31702647 MS.gene76633:CDS
ATACATTGCATTGTTGTGTT+TGG 0.412941 5.1:-31702726 None:intergenic
TTCTCCGAACTTCAACTCAT+TGG 0.422084 5.1:-31702837 None:intergenic
GACACTTTCATAGACTTCAA+TGG 0.425622 5.1:+31703001 MS.gene76633:CDS
GCATTTGGAGATTCCTTCAA+TGG 0.428480 5.1:+31702974 MS.gene76633:CDS
CTTACCAATGAGTTGAAGTT+CGG 0.429783 5.1:+31702833 MS.gene76633:CDS
ATAATGAAATAAAGAATCAT+TGG 0.440805 5.1:+31702474 MS.gene76633:CDS
TTCAGCTTCATGCACTTCTC+GGG 0.444052 5.1:+31701423 MS.gene76633:CDS
ATTTCATTATCTGTTCTCCT+TGG 0.449445 5.1:-31702461 None:intergenic
TATCAAACAAGTTGCTCAAT+GGG 0.451989 5.1:+31702604 MS.gene76633:CDS
ATGGTGGCATTGGATGCATT+TGG 0.456791 5.1:+31702959 MS.gene76633:CDS
TTGAAGTTCGGAGAAGGCTT+AGG 0.459115 5.1:+31702845 MS.gene76633:CDS
GAAAGTGTCAGTACCATTGA+AGG 0.460200 5.1:-31702987 None:intergenic
TTGAAAATGAGTAGGGCTCT+AGG 0.461511 5.1:+31700917 None:intergenic
CATTCTTTGCCCTCCAGAGC+AGG 0.475255 5.1:+31701019 MS.gene76633:CDS
ATCATTATTTGCAAGCATGA+TGG 0.476845 5.1:-31702759 None:intergenic
CTATCAAACAAGTTGCTCAA+TGG 0.479623 5.1:+31702603 MS.gene76633:CDS
GCAAGGTGATGATGATCTAA+TGG 0.487418 5.1:+31702940 MS.gene76633:CDS
CAAGAAAAGACTTATCAGAA+TGG 0.489082 5.1:+31702508 MS.gene76633:CDS
TGGCAGGAGAGCTGCTATTG+TGG 0.496430 5.1:-31702441 None:intergenic
CATGCAAACTATTGCTCAAG+AGG 0.502189 5.1:+31702898 MS.gene76633:CDS
TTGTGATTTGAAAATGAGTA+GGG 0.505830 5.1:+31700910 None:intergenic
TATATAGGTCTTAGAAGATG+TGG 0.511267 5.1:+31701314 MS.gene76633:intron
TGATGATCTAATGGTGGCAT+TGG 0.519218 5.1:+31702949 MS.gene76633:CDS
AATGTTAGATTAGAAGCTGA+AGG 0.524088 5.1:+31702629 MS.gene76633:CDS
TGAAAATGAGTAGGGCTCTA+GGG 0.531154 5.1:+31700918 None:intergenic
TTTGTGATTTGAAAATGAGT+AGG 0.538258 5.1:+31700909 None:intergenic
AATGAGTTGAAGTTCGGAGA+AGG 0.564111 5.1:+31702839 MS.gene76633:CDS
CAATAGCAGCTCTCCTGCCA+AGG 0.575828 5.1:+31702444 MS.gene76633:CDS
AGGGCTCTAGGGTTGAAGAA+AGG 0.597288 5.1:+31700929 MS.gene76633:CDS
GAACTTGATGAAGATAGTAA+AGG 0.599549 5.1:-31702686 None:intergenic
TGTAATGTTACCTGCTCTGG+AGG 0.601213 5.1:-31701029 None:intergenic
GTTTATGTGTCTAAATTGCA+AGG 0.622075 5.1:+31702923 MS.gene76633:CDS
TTCAACTCATTGGTAAGACA+AGG 0.629099 5.1:-31702827 None:intergenic
GAAAGAGTTGCAGACTGAGG+TGG 0.635300 5.1:+31701336 MS.gene76633:CDS
AGAAAAGACTTATCAGAATG+GGG 0.641194 5.1:+31702510 MS.gene76633:CDS
CTCATTAGGACAGCTCAATG+TGG 0.660198 5.1:-31702801 None:intergenic
ATAGCATATGTTACTCAACA+TGG 0.670094 5.1:+31700983 MS.gene76633:CDS
ACGAGGAAACTTCAGCTCAG+AGG 0.673756 5.1:+31701385 MS.gene76633:CDS
GTAATGTTACCTGCTCTGGA+GGG 0.677991 5.1:-31701028 None:intergenic
CTGAATCCTGATATAAAACG+AGG 0.681945 5.1:+31701368 MS.gene76633:CDS
TAGGGTTGAAGAAAGGACCA+TGG 0.703964 5.1:+31700936 MS.gene76633:CDS
AGGTGATGATGATCTAATGG+TGG 0.729997 5.1:+31702943 MS.gene76633:CDS
GTGGAAAGAGTTGCAGACTG+AGG 0.736692 5.1:+31701333 MS.gene76633:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAGAAAGAAAAAAAA+TGG - chr5.1:31702097-31702116 None:intergenic 10.0%
!! TTTGAAAAAGAAAAATAAAT+GGG + chr5.1:31701695-31701714 MS.gene76633:intron 10.0%
!!! TTTTGAAAAAGAAAAATAAA+TGG + chr5.1:31701694-31701713 MS.gene76633:intron 10.0%
!! ATAATGAAATAAAGAATCAT+TGG + chr5.1:31702474-31702493 MS.gene76633:CDS 15.0%
!! ATATATAAACTCAAGATTAC+TGG - chr5.1:31701299-31701318 None:intergenic 20.0%
!! ATATTACTCATAATTGAAGA+TGG - chr5.1:31701271-31701290 None:intergenic 20.0%
!! ATCAACTTTCTTTGATATTT+AGG + chr5.1:31701998-31702017 MS.gene76633:intron 20.0%
!! GTAATCTTGAGTTTATATAT+AGG + chr5.1:31701299-31701318 MS.gene76633:intron 20.0%
!! TGTATATTAACCTATTTACA+TGG + chr5.1:31701500-31701519 MS.gene76633:intron 20.0%
!!! AGATGGTTTTTTTTTTTGTT+TGG + chr5.1:31701169-31701188 MS.gene76633:intron 20.0%
!!! AGTCAAGTCTTAATATTTTT+TGG - chr5.1:31702319-31702338 None:intergenic 20.0%
!!! ATAGCTTGCTATATATAAAA+TGG + chr5.1:31701054-31701073 MS.gene76633:intron 20.0%
!!! TGAAGATGGATATTTTATAT+GGG - chr5.1:31701257-31701276 None:intergenic 20.0%
!!! TTGAAGATGGATATTTTATA+TGG - chr5.1:31701258-31701277 None:intergenic 20.0%
!!! TTTTCTCTTATACTTAAGAT+CGG - chr5.1:31701941-31701960 None:intergenic 20.0%
! AAGAAAAGACTTATCAGAAT+GGG + chr5.1:31702509-31702528 MS.gene76633:CDS 25.0%
! ACTTACAAGCAAATTAAAGT+AGG + chr5.1:31702033-31702052 MS.gene76633:intron 25.0%
! AGAGAAAATTGAGTCAAAAA+AGG + chr5.1:31701953-31701972 MS.gene76633:intron 25.0%
! CTTACAAGCAAATTAAAGTA+GGG + chr5.1:31702034-31702053 MS.gene76633:intron 25.0%
! CTTTCTTCATATTCTCTATT+TGG + chr5.1:31701470-31701489 MS.gene76633:intron 25.0%
! GACAATGCATAATATATGTA+AGG + chr5.1:31702265-31702284 MS.gene76633:intron 25.0%
! TGAATAATAACTGCATCTAT+TGG + chr5.1:31701875-31701894 MS.gene76633:intron 25.0%
! TTGATAAAGAGTAATGTTCA+TGG + chr5.1:31702389-31702408 MS.gene76633:intron 25.0%
! TTGATACAATGATACTAACA+CGG + chr5.1:31701822-31701841 MS.gene76633:intron 25.0%
!! TGATAACTTTGTATTTTCGT+TGG - chr5.1:31701745-31701764 None:intergenic 25.0%
!!! CAAGTCTTAATATTTTTTGG+TGG - chr5.1:31702316-31702335 None:intergenic 25.0%
!!! TCTCAAAGTTTTAGAGTTTT+TGG - chr5.1:31701599-31701618 None:intergenic 25.0%
!!! TTGTTGTTGTTGTTAGATTT+TGG - chr5.1:31702557-31702576 None:intergenic 25.0%
AATGTTAGATTAGAAGCTGA+AGG + chr5.1:31702629-31702648 MS.gene76633:CDS 30.0%
AGAAAAGACTTATCAGAATG+GGG + chr5.1:31702510-31702529 MS.gene76633:CDS 30.0%
ATACATTGCATTGTTGTGTT+TGG - chr5.1:31702729-31702748 None:intergenic 30.0%
ATAGCATATGTTACTCAACA+TGG + chr5.1:31700983-31701002 MS.gene76633:CDS 30.0%
ATCATTATTTGCAAGCATGA+TGG - chr5.1:31702762-31702781 None:intergenic 30.0%
ATTTCATTATCTGTTCTCCT+TGG - chr5.1:31702464-31702483 None:intergenic 30.0%
CAAGAAAAGACTTATCAGAA+TGG + chr5.1:31702508-31702527 MS.gene76633:CDS 30.0%
GAACATATAATGTCAGTATC+TGG - chr5.1:31702075-31702094 None:intergenic 30.0%
GAACTTGATGAAGATAGTAA+AGG - chr5.1:31702689-31702708 None:intergenic 30.0%
GTTTATGTGTCTAAATTGCA+AGG + chr5.1:31702923-31702942 MS.gene76633:CDS 30.0%
TATATAGGTCTTAGAAGATG+TGG + chr5.1:31701314-31701333 MS.gene76633:intron 30.0%
TATCAAACAAGTTGCTCAAT+GGG + chr5.1:31702604-31702623 MS.gene76633:CDS 30.0%
TCGTAACTTTGTATTTGTGT+TGG - chr5.1:31701797-31701816 None:intergenic 30.0%
TGATACAATGATACTAACAC+GGG + chr5.1:31701823-31701842 MS.gene76633:intron 30.0%
TGCATAATATATGTAAGGTC+CGG + chr5.1:31702270-31702289 MS.gene76633:intron 30.0%
TTCATAGACTTCAATGGAAA+TGG + chr5.1:31703007-31703026 MS.gene76633:CDS 30.0%
! AAGTTTCCTCGTTTTATATC+AGG - chr5.1:31701377-31701396 None:intergenic 30.0%
! ATAAGCTTCTTGTCTTCTTT+TGG - chr5.1:31700965-31700984 None:intergenic 30.0%
! GAACAAGTGAGATATTCTTT+TGG + chr5.1:31701445-31701464 MS.gene76633:intron 30.0%
! TAAGCTTCTTGTCTTCTTTT+GGG - chr5.1:31700964-31700983 None:intergenic 30.0%
!! TCAAAGAAAGTTGATGCATT+TGG - chr5.1:31701993-31702012 None:intergenic 30.0%
AACAATATGCACTTCACAGA+TGG + chr5.1:31702417-31702436 MS.gene76633:intron 35.0%
AAGGAACTGCACACAATAAA+GGG - chr5.1:31701125-31701144 None:intergenic 35.0%
ACCAAACAAGTTTCACTTTC+GGG + chr5.1:31701193-31701212 MS.gene76633:intron 35.0%
AGTGCAGTTTCCATGTAAAT+AGG - chr5.1:31701513-31701532 None:intergenic 35.0%
CAACAACAACAACAACAACA+AGG + chr5.1:31702565-31702584 MS.gene76633:CDS 35.0%
CAAGCAAATTAAAGTAGGGA+AGG + chr5.1:31702038-31702057 MS.gene76633:intron 35.0%
CACCAAACAAGTTTCACTTT+CGG + chr5.1:31701192-31701211 MS.gene76633:intron 35.0%
CATAATATATGTAAGGTCCG+GGG + chr5.1:31702272-31702291 MS.gene76633:intron 35.0%
CTATCAAACAAGTTGCTCAA+TGG + chr5.1:31702603-31702622 MS.gene76633:CDS 35.0%
CTGAATCCTGATATAAAACG+AGG + chr5.1:31701368-31701387 MS.gene76633:CDS 35.0%
GAAGGAAGATCATCAATGTT+AGG + chr5.1:31702647-31702666 MS.gene76633:CDS 35.0%
GACACTTTCATAGACTTCAA+TGG + chr5.1:31703001-31703020 MS.gene76633:CDS 35.0%
GCATAATATATGTAAGGTCC+GGG + chr5.1:31702271-31702290 MS.gene76633:intron 35.0%
TAAGGAACTGCACACAATAA+AGG - chr5.1:31701126-31701145 None:intergenic 35.0%
TTATGTGACCTTGTCTCATT+GGG - chr5.1:31701650-31701669 None:intergenic 35.0%
TTCAACTCATTGGTAAGACA+AGG - chr5.1:31702830-31702849 None:intergenic 35.0%
TTGAAGCGGTTAGCAAAATA+AGG - chr5.1:31701144-31701163 None:intergenic 35.0%
! AAGCTTCTTGTCTTCTTTTG+GGG - chr5.1:31700963-31700982 None:intergenic 35.0%
! CTCGTTTTATATCAGGATTC+AGG - chr5.1:31701370-31701389 None:intergenic 35.0%
! CTTACCAATGAGTTGAAGTT+CGG + chr5.1:31702833-31702852 MS.gene76633:CDS 35.0%
!! AAACCATCTAAGCATTGAAG+CGG - chr5.1:31701158-31701177 None:intergenic 35.0%
!! GTACAATTTTGATGCTAGCT+TGG + chr5.1:31703033-31703052 MS.gene76633:CDS 35.0%
!!! GTTAGATTTTGGTTTGTGAG+TGG - chr5.1:31702546-31702565 None:intergenic 35.0%
AGGAACTGCACACAATAAAG+GGG - chr5.1:31701124-31701143 None:intergenic 40.0%
ATTCAGCTTCATGCACTTCT+CGG + chr5.1:31701422-31701441 MS.gene76633:CDS 40.0%
CATGCAAACTATTGCTCAAG+AGG + chr5.1:31702898-31702917 MS.gene76633:CDS 40.0%
CTTATGTGACCTTGTCTCAT+TGG - chr5.1:31701651-31701670 None:intergenic 40.0%
GCAAAGAATGCCAGTTTCTA+TGG - chr5.1:31701009-31701028 None:intergenic 40.0%
GCATTTGGAGATTCCTTCAA+TGG + chr5.1:31702974-31702993 MS.gene76633:CDS 40.0%
GTAAGACAAGGAAGCTCATT+AGG - chr5.1:31702818-31702837 None:intergenic 40.0%
TAACCGCTTCAATGCTTAGA+TGG + chr5.1:31701152-31701171 MS.gene76633:intron 40.0%
TGATGATCTAATGGTGGCAT+TGG + chr5.1:31702949-31702968 MS.gene76633:CDS 40.0%
TTCTCCGAACTTCAACTCAT+TGG - chr5.1:31702840-31702859 None:intergenic 40.0%
! AATGAGTTGAAGTTCGGAGA+AGG + chr5.1:31702839-31702858 MS.gene76633:CDS 40.0%
! AGGTGATGATGATCTAATGG+TGG + chr5.1:31702943-31702962 MS.gene76633:CDS 40.0%
! GCAAGGTGATGATGATCTAA+TGG + chr5.1:31702940-31702959 MS.gene76633:CDS 40.0%
! TCCCGAAAGTGAAACTTGTT+TGG - chr5.1:31701197-31701216 None:intergenic 40.0%
!! GAAAGTGTCAGTACCATTGA+AGG - chr5.1:31702990-31703009 None:intergenic 40.0%
!!! AATATTTTTTGGTGGTGCCG+CGG - chr5.1:31702308-31702327 None:intergenic 40.0%
!!! AGATTTTGGTTTGTGAGTGG+TGG - chr5.1:31702543-31702562 None:intergenic 40.0%
!!! GATTTTGGTTTGTGAGTGGT+GGG - chr5.1:31702542-31702561 None:intergenic 40.0%
ACCTTGTCTCATTGGGAGTA+GGG - chr5.1:31701643-31701662 None:intergenic 45.0%
CATTATCTGTTCTCCTTGGC+AGG - chr5.1:31702460-31702479 None:intergenic 45.0%
CTCAACATGGCCATAGAAAC+TGG + chr5.1:31700996-31701015 MS.gene76633:CDS 45.0%
CTCATTAGGACAGCTCAATG+TGG - chr5.1:31702804-31702823 None:intergenic 45.0%
TAGGGTTGAAGAAAGGACCA+TGG + chr5.1:31700936-31700955 MS.gene76633:CDS 45.0%
TCAACTGAGCTGAGCTCATA+AGG - chr5.1:31702241-31702260 None:intergenic 45.0%
TGCTGTAATGTTACCTGCTC+TGG - chr5.1:31701035-31701054 None:intergenic 45.0%
TGTAATGTTACCTGCTCTGG+AGG - chr5.1:31701032-31701051 None:intergenic 45.0%
TTCAGCTTCATGCACTTCTC+GGG + chr5.1:31701423-31701442 MS.gene76633:CDS 45.0%
TTGAAGTTCGGAGAAGGCTT+AGG + chr5.1:31702845-31702864 MS.gene76633:CDS 45.0%
! ATGGTGGCATTGGATGCATT+TGG + chr5.1:31702959-31702978 MS.gene76633:CDS 45.0%
! GTAATGTTACCTGCTCTGGA+GGG - chr5.1:31701031-31701050 None:intergenic 45.0%
! TGAGCTCAGCTCAGTTGATA+TGG + chr5.1:31702243-31702262 MS.gene76633:intron 45.0%
!! TTGTCTTCTTTTGGGGACCA+TGG - chr5.1:31700956-31700975 None:intergenic 45.0%
ACCCTACTCCCAATGAGACA+AGG + chr5.1:31701639-31701658 MS.gene76633:intron 50.0%
ACGAGGAAACTTCAGCTCAG+AGG + chr5.1:31701385-31701404 MS.gene76633:CDS 50.0%
GAAAGAGTTGCAGACTGAGG+TGG + chr5.1:31701336-31701355 MS.gene76633:CDS 50.0%
GACCTTGTCTCATTGGGAGT+AGG - chr5.1:31701644-31701663 None:intergenic 50.0%
GTGGAAAGAGTTGCAGACTG+AGG + chr5.1:31701333-31701352 MS.gene76633:CDS 50.0%
TGCACACAATAAAGGGGTCG+TGG - chr5.1:31701118-31701137 None:intergenic 50.0%
!! AGGGCTCTAGGGTTGAAGAA+AGG + chr5.1:31700929-31700948 MS.gene76633:CDS 50.0%
CAATAGCAGCTCTCCTGCCA+AGG + chr5.1:31702444-31702463 MS.gene76633:CDS 55.0%
CATTCTTTGCCCTCCAGAGC+AGG + chr5.1:31701019-31701038 MS.gene76633:CDS 55.0%
TGGCAGGAGAGCTGCTATTG+TGG - chr5.1:31702444-31702463 None:intergenic 55.0%
!!! TTTTTTGGTGGTGCCGCGGT+TGG - chr5.1:31702304-31702323 None:intergenic 55.0%
TCCGGGGTTCAAACCAACCG+CGG + chr5.1:31702288-31702307 MS.gene76633:intron 60.0%
!! GCCGCGGTTGGTTTGAACCC+CGG - chr5.1:31702292-31702311 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 31700923 31703069 31700923 ID=MS.gene76633
chr5.1 mRNA 31700923 31703069 31700923 ID=MS.gene76633.t1;Parent=MS.gene76633
chr5.1 exon 31700923 31701040 31700923 ID=MS.gene76633.t1.exon1;Parent=MS.gene76633.t1
chr5.1 CDS 31700923 31701040 31700923 ID=cds.MS.gene76633.t1;Parent=MS.gene76633.t1
chr5.1 exon 31701321 31701450 31701321 ID=MS.gene76633.t1.exon2;Parent=MS.gene76633.t1
chr5.1 CDS 31701321 31701450 31701321 ID=cds.MS.gene76633.t1;Parent=MS.gene76633.t1
chr5.1 exon 31702436 31703069 31702436 ID=MS.gene76633.t1.exon3;Parent=MS.gene76633.t1
chr5.1 CDS 31702436 31703069 31702436 ID=cds.MS.gene76633.t1;Parent=MS.gene76633.t1
Gene Sequence

>MS.gene76633

ATGAGTAGGGCTCTAGGGTTGAAGAAAGGACCATGGTCCCCAAAAGAAGACAAGAAGCTTATAGCATATGTTACTCAACATGGCCATAGAAACTGGCATTCTTTGCCCTCCAGAGCAGGTAACATTACAGCATAGCTTGCTATATATAAAATGGAGAATGCTTTTTATAGCGACAAATAAATTCGCATAATTCCACGACCCCTTTATTGTGTGCAGTTCCTTATTTTGCTAACCGCTTCAATGCTTAGATGGTTTTTTTTTTTGTTTGGCACCAAACAAGTTTCACTTTCGGGATGATTTCGCGAGATTTCTCTCGCGTTATATAGCACTTCCCATATAAAATATCCATCTTCAATTATGAGTAATATATTATCCAGTAATCTTGAGTTTATATATAGGTCTTAGAAGATGTGGAAAGAGTTGCAGACTGAGGTGGATTAACTACCTGAATCCTGATATAAAACGAGGAAACTTCAGCTCAGAGGAAGATCACACTATTATTCAGCTTCATGCACTTCTCGGGAACAAGTGAGATATTCTTTTGGATCTTTCTTCATATTCTCTATTTGGAAATCTTTGTATATTAACCTATTTACATGGAAACTGCACTTGTTTTATTTTGTTTCTATGAAGTTATAACAAGAGACATATAATTTTGAAGCACAGTGATTTACCAAAAACTCTAAAACTTTGAGAGAATACAAACGATAAAAGAAACCCTACTCCCAATGAGACAAGGTCACATAAGATATTGTATCACATGTTTTATTTTTTTGAAAAAGAAAAATAAATGGGTTATTAAGAAAAAACAAGAGAATTCCAACGAAAATACAAAGTTATCAGTCAAAAAAGAAGAATAAGTAAGAGTATTCCAACACAAATACAAAGTTACGAAGAACTTGATACAATGATACTAACACGGGACACAACACAGATAATAATGTGAGAAAGTTGAATAATAACTGCATCTATTGGTTTGTGTTAGCTTTACATTAGAAGTCTCTGTGCTATTTCTCCGATCTTAAGTATAAGAGAAAATTGAGTCAAAAAAGGTTAATAAATTAGATCCAAATGCATCAACTTTCTTTGATATTTAGGATCAGAGATAGCACTTACAAGCAAATTAAAGTAGGGAAGGAAAATCAGAAACCAGATACTGACATTATATGTTCCATTTTTTTTCTTTCTAATTTTATGTCATCTATAAAATCACATACAAGAAGTAAAGAATATTATTATTCACTATTCATATATTAGAACACTTGAATGACATGTTATGTTATTATTCACTATTCTTATATTAAGACTTGACTGTCCTTATGAGCTCAGCTCAGTTGATATGGACAATGCATAATATATGTAAGGTCCGGGGTTCAAACCAACCGCGGCACCACCAAAAAATATTAAGACTTGACTAAGATAAAATGAATAGTGATTTTTGTCTAGTACTTGTTGAGATTTAATTTTTGATAAAGAGTAATGTTCATGGATGTGAACAATATGCACTTCACAGATGGTCCACAATAGCAGCTCTCCTGCCAAGGAGAACAGATAATGAAATAAAGAATCATTGGAACAGTAACATCAAGAAAAGACTTATCAGAATGGGGATAGATCCCACCACTCACAAACCAAAATCTAACAACAACAACAACAACAACAAGGACAATGTCAATTCTGCTATCAAACAAGTTGCTCAATGGGAGAATGTTAGATTAGAAGCTGAAGGAAGATCATCAATGTTAGGAAAAACTCAAACTCAGCCTTTACTATCTTCATCAAGTTCATCAAAGTTATCACTAACCAAACACAACAATGCAATGTATAACTTGTGTGCCATCATGCTTGCAAATAATGATGACTCTTTTTCTTCAACATCCACATTGAGCTGTCCTAATGAGCTTCCTTGTCTTACCAATGAGTTGAAGTTCGGAGAAGGCTTAGGATCACATGAGAGTATTAGTAATATTAATATCATGCAAACTATTGCTCAAGAGGATGTTTATGTGTCTAAATTGCAAGGTGATGATGATCTAATGGTGGCATTGGATGCATTTGGAGATTCCTTCAATGGTACTGACACTTTCATAGACTTCAATGGAAATGGAATGTACAATTTTGATGCTAGCTTGGCATTTTTTGAGTAA
Protein sequence

>MS.gene76633.t1

MSRALGLKKGPWSPKEDKKLIAYVTQHGHRNWHSLPSRAGLRRCGKSCRLRWINYLNPDIKRGNFSSEEDHTIIQLHALLGNKWSTIAALLPRRTDNEIKNHWNSNIKKRLIRMGIDPTTHKPKSNNNNNNNKDNVNSAIKQVAQWENVRLEAEGRSSMLGKTQTQPLLSSSSSSKLSLTKHNNAMYNLCAIMLANNDDSFSSTSTLSCPNELPCLTNELKFGEGLGSHESISNINIMQTIAQEDVYVSKLQGDDDLMVALDAFGDSFNGTDTFIDFNGNGMYNFDASLAFFE