AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76855

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76855.t1 MTR_6g051425 29.603 277 178 6 50 313 19 291 4.05e-34 134
MS.gene76855.t1 MTR_0856s0010 44.311 167 84 4 9 173 1 160 2.04e-33 126
MS.gene76855.t1 MTR_4g035820 30.405 296 180 12 9 288 39 324 5.42e-24 108
MS.gene76855.t1 MTR_0558s0020 24.913 289 183 8 30 284 8 296 1.28e-20 93.6
MS.gene76855.t1 MTR_7g446060 51.220 82 40 0 130 211 7 88 1.05e-19 86.3
MS.gene76855.t1 MTR_1g070355 28.511 235 153 7 54 278 80 309 1.39e-19 93.6
MS.gene76855.t1 MTR_3g450850 26.829 287 191 8 2 272 3 286 2.64e-17 84.7
MS.gene76855.t1 MTR_6g022070 28.276 145 100 1 338 482 1 141 1.68e-16 82.0
MS.gene76855.t1 MTR_8g446020 24.153 236 158 4 52 284 39 256 2.02e-16 80.5
MS.gene76855.t1 MTR_7g446480 31.395 172 117 1 122 292 143 314 3.47e-16 80.9
MS.gene76855.t1 MTR_7g446510 31.928 166 112 1 128 292 164 329 1.88e-15 79.0
MS.gene76855.t1 MTR_1g008290 31.579 133 89 1 108 240 14 144 1.89e-15 74.7
MS.gene76855.t1 MTR_7g446520 25.424 236 163 2 52 286 92 315 2.06e-15 78.6
MS.gene76855.t1 MTR_1g019850 30.303 165 98 6 17 175 43 196 3.30e-14 73.6
MS.gene76855.t1 MTR_7g115320 59.259 54 19 1 137 190 9 59 1.24e-13 67.4
MS.gene76855.t1 MTR_3g012160 41.975 81 46 1 193 273 14 93 1.35e-13 67.4
MS.gene76855.t1 MTR_1g083640 22.794 272 176 8 18 255 11 282 3.31e-13 71.2
MS.gene76855.t1 MTR_1g013060 23.944 213 147 6 44 244 20 229 3.70e-13 70.1
MS.gene76855.t1 MTR_5g023310 28.662 157 43 3 179 334 16 104 4.29e-13 66.6
MS.gene76855.t1 MTR_6g090505 25.281 178 130 2 109 283 53 230 2.54e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76855.t1 AT4G15090 32.153 734 457 15 48 771 51 753 4.16e-121 384
MS.gene76855.t1 AT4G15090 32.153 734 457 15 48 771 51 753 4.16e-121 384
MS.gene76855.t1 AT4G15090 32.153 734 457 15 48 771 51 753 4.16e-121 384
MS.gene76855.t1 AT4G15090 32.153 734 457 15 48 771 51 753 4.16e-121 384
MS.gene76855.t1 AT4G15090 32.153 734 457 15 48 771 51 753 4.16e-121 384
MS.gene76855.t1 AT4G38180 32.178 721 437 16 8 694 38 740 1.95e-118 376
MS.gene76855.t1 AT3G22170 29.653 779 472 15 18 770 35 763 5.50e-111 357
MS.gene76855.t1 AT3G22170 29.653 779 472 15 18 770 35 763 5.50e-111 357
MS.gene76855.t1 AT1G76320 32.034 590 371 11 52 633 1 568 2.24e-104 335
MS.gene76855.t1 AT1G76320 32.034 590 371 11 52 633 1 568 6.08e-104 336
MS.gene76855.t1 AT1G76320 32.034 590 371 11 52 633 1 568 7.79e-104 336
MS.gene76855.t1 AT1G76320 32.034 590 371 11 52 633 1 568 7.79e-104 336
MS.gene76855.t1 AT1G52520 32.368 587 372 12 33 607 66 639 2.51e-102 331
MS.gene76855.t1 AT2G27110 31.803 610 363 14 48 645 49 617 2.60e-94 313
MS.gene76855.t1 AT2G27110 31.803 610 363 14 48 645 49 617 2.60e-94 313
MS.gene76855.t1 AT3G06250 33.570 563 322 15 48 606 190 704 2.58e-92 306
MS.gene76855.t1 AT3G06250 33.570 563 322 15 48 606 190 704 2.58e-92 306
MS.gene76855.t1 AT3G06250 33.570 563 322 15 48 606 190 704 2.58e-92 306
MS.gene76855.t1 AT1G80010 32.890 602 356 14 39 610 82 665 2.25e-90 300
MS.gene76855.t1 AT2G27110 34.937 478 288 9 172 645 14 472 2.00e-89 296
MS.gene76855.t1 AT5G18960 31.639 610 346 16 28 622 192 745 1.36e-85 288
MS.gene76855.t1 AT5G18960 31.639 610 346 16 28 622 192 745 1.36e-85 288
MS.gene76855.t1 AT2G32250 34.312 443 270 6 224 658 176 605 7.96e-82 278
MS.gene76855.t1 AT2G32250 34.312 443 270 6 224 658 135 564 9.92e-82 277
MS.gene76855.t1 AT2G32250 34.312 443 270 6 224 658 135 564 1.13e-81 277
MS.gene76855.t1 AT2G32250 34.312 443 270 6 224 658 176 605 1.50e-81 278
MS.gene76855.t1 AT2G32250 34.312 443 270 6 224 658 176 605 1.50e-81 278
MS.gene76855.t1 AT2G32250 34.312 443 270 6 224 658 176 605 1.52e-81 278
MS.gene76855.t1 AT2G32250 34.312 443 270 6 224 658 176 605 1.52e-81 278
MS.gene76855.t1 AT2G32250 34.312 443 270 6 224 658 176 605 1.52e-81 278
MS.gene76855.t1 AT4G19990 30.198 606 353 12 51 632 24 583 3.20e-79 270
MS.gene76855.t1 AT4G19990 30.198 606 353 12 51 632 24 583 3.20e-79 270
MS.gene76855.t1 AT4G19990 30.198 606 353 12 51 632 24 583 3.81e-79 270
MS.gene76855.t1 AT4G19990 30.198 606 353 12 51 632 38 597 4.90e-79 270
MS.gene76855.t1 AT4G19990 30.198 606 353 12 51 632 24 583 6.62e-79 270
MS.gene76855.t1 AT4G19990 30.198 606 353 12 51 632 24 583 6.62e-79 270
MS.gene76855.t1 AT4G38170 33.763 388 246 4 221 606 21 399 1.17e-75 255
MS.gene76855.t1 AT4G19990 30.983 539 318 10 104 632 32 526 5.15e-75 258
MS.gene76855.t1 AT1G10240 27.055 584 383 15 42 603 42 604 1.25e-62 223
MS.gene76855.t1 AT1G10240 27.055 584 383 15 42 603 42 604 1.25e-62 223
MS.gene76855.t1 AT5G28530 27.778 594 365 13 46 603 53 618 2.86e-60 216
MS.gene76855.t1 AT5G28530 27.521 585 374 11 46 603 53 614 1.57e-59 214
MS.gene76855.t1 AT5G28530 27.521 585 374 11 46 603 53 614 1.57e-59 214
MS.gene76855.t1 AT5G28530 26.829 328 202 7 290 603 252 555 2.15e-27 118
MS.gene76855.t1 AT5G28530 26.332 319 211 5 290 603 252 551 1.08e-26 116

Find 155 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGTTGACGTTTCGGATTC+CGG 0.204382 2.2:-39148305 MS.gene76855:CDS
TCTTTCCCGCTCTTCGAAAA+TGG 0.249066 2.2:+39147143 None:intergenic
GATCGCAAACCCTTGTTTCA+TGG 0.299904 2.2:+39148178 None:intergenic
AAGACCGCAACCTAGTAAAA+TGG 0.321194 2.2:+39147497 None:intergenic
GTGTTGACGTTTCGGATTCC+GGG 0.344560 2.2:-39148304 MS.gene76855:CDS
GGCTATGCAGAATGCAATTC+AGG 0.347065 2.2:-39147373 MS.gene76855:CDS
TTGCTTTAAAGAAGGGTCTA+TGG 0.361166 2.2:-39148007 MS.gene76855:CDS
TGCGGCTCGTGTTGACGTTT+CGG 0.362249 2.2:-39148312 MS.gene76855:CDS
ATGCCATTTGCCCCGTTTGT+TGG 0.369173 2.2:-39147540 MS.gene76855:CDS
ACTAAATCACGGTTGTTTGC+TGG 0.375082 2.2:-39147939 MS.gene76855:CDS
TGATCGGTTACAATTCCTAT+TGG 0.377174 2.2:+39147402 None:intergenic
AGTATTGTGTTGATTTCAAC+GGG 0.389824 2.2:-39146729 MS.gene76855:CDS
CACCACCTATGCCTAGTATT+AGG 0.393202 2.2:+39147342 None:intergenic
GTACACCCATGACAAGTATA+TGG 0.398379 2.2:-39146875 MS.gene76855:CDS
GGATTAAGAATTGGTTGATC+AGG 0.405554 2.2:+39146307 None:intergenic
CTAGGCATAGGTGGTGTCTA+TGG 0.405638 2.2:-39147335 MS.gene76855:CDS
ACTTCGACAACCGAAACAAT+TGG 0.413255 2.2:+39146187 None:intergenic
AAAGGATGATCGATCAATAT+AGG 0.415391 2.2:+39148365 None:intergenic
ACATTACTTCCTATGTCTGA+TGG 0.423977 2.2:-39146055 MS.gene76855:CDS
CCTCTGTGTTGTTGACATTC+CGG 0.424793 2.2:+39147086 None:intergenic
GATGATTGACACCAACAAAC+GGG 0.432575 2.2:+39147529 None:intergenic
TTGGTGGTATGTTTGATTCA+TGG 0.433399 2.2:+39148081 None:intergenic
TCTCCGTCAAGGGGTAATAA+AGG 0.433585 2.2:+39148347 None:intergenic
ACACCAACAAACGGGGCAAA+TGG 0.438957 2.2:+39147537 None:intergenic
GCAAACAACCGTGATTTAGT+TGG 0.439208 2.2:+39147942 None:intergenic
ATGGTTTGGGTGAAAATGAT+TGG 0.445440 2.2:-39147173 MS.gene76855:CDS
CATTACTTCCTATGTCTGAT+GGG 0.447968 2.2:-39146054 MS.gene76855:CDS
TGATGATTGACACCAACAAA+CGG 0.449717 2.2:+39147528 None:intergenic
ACACAATACTTAGTTTCGTT+CGG 0.457073 2.2:+39146742 None:intergenic
GGCTAAGGTGTATGTCTTCG+AGG 0.457503 2.2:-39147428 MS.gene76855:CDS
TATCCTACTTTGCTAGAATG+AGG 0.459924 2.2:-39147716 MS.gene76855:CDS
AAAACTAGAAACTCTAAGAA+AGG 0.460138 2.2:-39148155 MS.gene76855:CDS
AAACTAGAAACTCTAAGAAA+GGG 0.460938 2.2:-39148154 MS.gene76855:CDS
CATCCTTTATTACCCCTTGA+CGG 0.461930 2.2:-39148350 MS.gene76855:CDS
ACTCCAAGACAAGGCTGAAA+AGG 0.462412 2.2:-39146980 MS.gene76855:CDS
CAAATGGTCTAGCAAGAAGT+TGG 0.463702 2.2:-39146410 MS.gene76855:CDS
AGGTTGTGTTTCCTAATACT+AGG 0.465284 2.2:-39147353 MS.gene76855:CDS
GCAAAAGAAAGACACCTTCT+CGG 0.472868 2.2:-39147765 MS.gene76855:CDS
GATAACGGTTGCTTTAAAGA+AGG 0.473052 2.2:-39148015 MS.gene76855:CDS
AACATCACCAAAGTATTCAT+AGG 0.473828 2.2:+39147602 None:intergenic
TTTGTTGGTGTCAATCATCA+TGG 0.475674 2.2:-39147525 MS.gene76855:CDS
CCACACATAGAAAGATTTGA+AGG 0.478166 2.2:-39146514 MS.gene76855:CDS
GCCACATTGTGGTGTGGGAG+GGG 0.479684 2.2:-39146371 MS.gene76855:CDS
GAGCAATCAAGTTTCTTCGT+TGG 0.480101 2.2:+39148044 None:intergenic
CACTTATGCTCGATGGCTGA+TGG 0.482201 2.2:-39148392 None:intergenic
TCGGGAAGGAAGGAGATGGC+AGG 0.482875 2.2:-39147746 MS.gene76855:CDS
ATTTGTTGTTTCAAAGGTCC+CGG 0.485747 2.2:+39148286 None:intergenic
TTGAAATTGTCTCTCGATTG+TGG 0.489013 2.2:+39146903 None:intergenic
GACAGCATTTGTTGTTTCAA+AGG 0.491833 2.2:+39148280 None:intergenic
CTTGTTTCATGGCATATTCA+CGG 0.492232 2.2:+39148189 None:intergenic
AAAACCACTAGTTGACTGTT+GGG 0.492621 2.2:+39145994 None:intergenic
TCCGTTAAAAGTACCACGTA+AGG 0.492742 2.2:-39146287 MS.gene76855:CDS
GACAATACTCTCCTCTAAAA+CGG 0.498094 2.2:+39146774 None:intergenic
CGTGAATATGCCATGAAACA+AGG 0.498225 2.2:-39148188 MS.gene76855:CDS
ATCAGCTAGCTCTCCGTCAA+GGG 0.500449 2.2:+39148337 None:intergenic
TGTATGAAGAAATGATCAAA+TGG 0.501577 2.2:-39146426 MS.gene76855:CDS
TTAAAAGACATACCGATAGT+AGG 0.501742 2.2:+39148239 None:intergenic
TTTCGAAGAGCGGGAAAGAT+GGG 0.502201 2.2:-39147139 MS.gene76855:CDS
GTTGGATTCGTCTTCAAAGT+TGG 0.502236 2.2:+39148062 None:intergenic
ATACTTGTCATGGGTGTACT+CGG 0.502362 2.2:+39146879 None:intergenic
CATCTCCTTCCTTCCCGAGA+AGG 0.502837 2.2:+39147751 None:intergenic
TTACCTGGTTGTTCGAAACA+TGG 0.503284 2.2:-39147449 MS.gene76855:CDS
TGGTCATCTTAGAGTGAAAG+AGG 0.503540 2.2:-39146629 MS.gene76855:CDS
TCGGTTACAATTCCTATTGG+AGG 0.507036 2.2:+39147405 None:intergenic
ATGTCTTCGAGGCCTCCAAT+AGG 0.511194 2.2:-39147417 MS.gene76855:CDS
TCTGATGGGTTTCAAGCGTC+CGG 0.512219 2.2:-39146040 MS.gene76855:CDS
TTACGAAAATCTAACATTTG+TGG 0.512305 2.2:-39147811 MS.gene76855:CDS
AAACGATCAGGCAGGTGTAC+GGG 0.512319 2.2:-39147874 MS.gene76855:CDS
GAGAGATGTCAGAAACTTTG+TGG 0.514693 2.2:-39147787 MS.gene76855:CDS
TCTGGGCTGATGCACGTAGT+AGG 0.516810 2.2:-39147629 MS.gene76855:CDS
CAAAAGAAAGACACCTTCTC+GGG 0.517286 2.2:-39147764 MS.gene76855:CDS
GTATCTCCATATACTTGTCA+TGG 0.517305 2.2:+39146869 None:intergenic
CCTTCAAATCTTTCTATGTG+TGG 0.521556 2.2:+39146514 None:intergenic
ATAACGGTTGCTTTAAAGAA+GGG 0.522275 2.2:-39148014 MS.gene76855:CDS
TTCCCTCATTCTAGCAAAGT+AGG 0.524536 2.2:+39147713 None:intergenic
AAATGGTCTAGCAAGAAGTT+GGG 0.529100 2.2:-39146409 MS.gene76855:CDS
GAACAAAAGTTTCCGTTCCA+TGG 0.529264 2.2:-39147850 MS.gene76855:CDS
GGATTCGTCTTCAAAGTTGG+TGG 0.530111 2.2:+39148065 None:intergenic
TAAACGATCAGGCAGGTGTA+CGG 0.533293 2.2:-39147875 MS.gene76855:CDS
AAGTATTGTGTTGATTTCAA+CGG 0.536214 2.2:-39146730 MS.gene76855:CDS
TAAAACCACTAGTTGACTGT+TGG 0.536849 2.2:+39145993 None:intergenic
ATCCTACTTTGCTAGAATGA+GGG 0.537508 2.2:-39147715 MS.gene76855:CDS
CTGCATAGCCTTGCACTGAT+CGG 0.542185 2.2:+39147386 None:intergenic
CTATGAGATTGACATGGACG+AGG 0.547341 2.2:-39147673 MS.gene76855:CDS
TGATTGCTCAGCTAAGATAA+CGG 0.550952 2.2:-39148030 MS.gene76855:CDS
GATAAATTCACGCCTACTAT+CGG 0.551302 2.2:-39148251 MS.gene76855:CDS
TGTTTGCTGTTTGAGTTCAG+AGG 0.551367 2.2:-39146682 MS.gene76855:CDS
TATCTCCATATACTTGTCAT+GGG 0.551454 2.2:+39146870 None:intergenic
ATTCTAACTTGTGCAAGAGA+AGG 0.552020 2.2:-39148107 MS.gene76855:CDS
AGGTCTGCCTATGAATACTT+TGG 0.552277 2.2:-39147609 MS.gene76855:CDS
AGACACCTTCTCGGGAAGGA+AGG 0.553011 2.2:-39147756 MS.gene76855:CDS
CAGCCACATTGTGGTGTGGG+AGG 0.557227 2.2:-39146373 MS.gene76855:CDS
TTACAGCCACATTGTGGTGT+GGG 0.557892 2.2:-39146376 MS.gene76855:CDS
TGTTTCGAACAACCAGGTAA+AGG 0.558836 2.2:+39147452 None:intergenic
AACTCTAAGAAAGGGGCCGA+TGG 0.560180 2.2:-39148146 MS.gene76855:CDS
AGCCACATTGTGGTGTGGGA+GGG 0.562336 2.2:-39146372 MS.gene76855:CDS
CTAAATTTATCTTGCCACGA+TGG 0.563368 2.2:-39146600 MS.gene76855:CDS
CATCAGCTAGCTCTCCGTCA+AGG 0.566436 2.2:+39148336 None:intergenic
GAGATACAAGTAGAATTTCG+TGG 0.566723 2.2:-39146853 MS.gene76855:CDS
GAACAACCAGGTAAAGGACT+TGG 0.570795 2.2:+39147458 None:intergenic
TGTTTCCTAATACTAGGCAT+AGG 0.571109 2.2:-39147347 MS.gene76855:CDS
TTGTTGGTGTCAATCATCAT+GGG 0.576932 2.2:-39147524 MS.gene76855:CDS
TCTCGAAGGTGTGACTACAT+TGG 0.577648 2.2:-39146815 MS.gene76855:CDS
TCAGACATAGGAAGTAATGT+AGG 0.589454 2.2:+39146058 None:intergenic
TTGTGTGTATGATTCTCTGC+GGG 0.590009 2.2:-39147238 MS.gene76855:CDS
CATTTCTTCATACAAATCAG+AGG 0.596809 2.2:+39146435 None:intergenic
ACCACGGGCATCACATACCA+TGG 0.597354 2.2:+39147833 None:intergenic
GCTTGAAACCCATCAGACAT+AGG 0.602294 2.2:+39146046 None:intergenic
GTGAATATGCCATGAAACAA+GGG 0.602322 2.2:-39148187 MS.gene76855:CDS
AAGATACCAAGTCCTTTACC+TGG 0.605756 2.2:-39147464 MS.gene76855:CDS
GAAGTAGTTAAGCGTATCAC+CGG 0.605920 2.2:+39146021 None:intergenic
CGACAACGCACTCCAAGACA+AGG 0.606607 2.2:-39146989 MS.gene76855:CDS
AGATACAAGTAGAATTTCGT+GGG 0.607840 2.2:-39146852 MS.gene76855:CDS
AGAAAGACACCTTCTCGGGA+AGG 0.609091 2.2:-39147760 MS.gene76855:CDS
GACAACCGACGATTAGTTCG+AGG 0.611005 2.2:+39146259 None:intergenic
TGCATCAATGAGCAAAGATG+TGG 0.611914 2.2:-39145960 MS.gene76855:CDS
AAATGCAACTGTTATCTCGA+AGG 0.615193 2.2:-39146829 MS.gene76855:CDS
TTCCTAATACTAGGCATAGG+TGG 0.615209 2.2:-39147344 MS.gene76855:CDS
CAAGCACAATCATTCCATGC+GGG 0.616971 2.2:-39146933 MS.gene76855:CDS
GGTTGTTCGAAACATGGCTA+AGG 0.617470 2.2:-39147443 MS.gene76855:CDS
CGTGGCAAGATAAATTTAGA+CGG 0.619992 2.2:+39146604 None:intergenic
CGGGAAGGAAGGAGATGGCA+GGG 0.622349 2.2:-39147745 MS.gene76855:CDS
AATTGTAACCGATCAGTGCA+AGG 0.623201 2.2:-39147394 MS.gene76855:CDS
TCATCCCAACAGTCAACTAG+TGG 0.623204 2.2:-39145998 MS.gene76855:CDS
CCGTTAAAAGTACCACGTAA+GGG 0.624486 2.2:-39146286 MS.gene76855:CDS
TAGCCATGTTTCGAACAACC+AGG 0.627145 2.2:+39147446 None:intergenic
ATTGTGGAATTTGACCCGCA+TGG 0.627292 2.2:+39146919 None:intergenic
GTTCGAGGACGTCCCTTACG+TGG 0.628497 2.2:+39146274 None:intergenic
CAAGGCTGAAAAGGAATACG+AGG 0.629739 2.2:-39146971 MS.gene76855:CDS
CTTCTCGGGAAGGAAGGAGA+TGG 0.631777 2.2:-39147750 MS.gene76855:CDS
TTTACAGCCACATTGTGGTG+TGG 0.632168 2.2:-39146377 MS.gene76855:CDS
AACTAGAAACTCTAAGAAAG+GGG 0.633083 2.2:-39148153 MS.gene76855:CDS
ATGAGTTTACAGCCACATTG+TGG 0.634509 2.2:-39146382 MS.gene76855:CDS
AAAGGATACGCACAATACAA+AGG 0.637659 2.2:-39147282 MS.gene76855:CDS
GGATGATCGATCAATATAGG+AGG 0.639611 2.2:+39148368 None:intergenic
TACAAATCAGAGGTTTGACT+AGG 0.642589 2.2:+39146445 None:intergenic
AGATAAGTCCAACTAAATCA+CGG 0.645312 2.2:-39147950 MS.gene76855:CDS
GGGCATCACATACCATGGAA+CGG 0.648721 2.2:+39147838 None:intergenic
CTTGACGGAGAGCTAGCTGA+TGG 0.649164 2.2:-39148335 MS.gene76855:CDS
TCAGCTAGCTCTCCGTCAAG+GGG 0.651971 2.2:+39148338 None:intergenic
TTATGAAATTGCAGAATGTG+CGG 0.662542 2.2:-39146476 MS.gene76855:CDS
CGGAGAGCTAGCTGATGGTG+CGG 0.664984 2.2:-39148330 MS.gene76855:CDS
ATGATTGACACCAACAAACG+GGG 0.665562 2.2:+39147530 None:intergenic
TTAGAGGAGAGTATTGTCTG+TGG 0.669312 2.2:-39146769 MS.gene76855:CDS
GGATCATAGCTTAAACACGA+TGG 0.674970 2.2:-39146350 MS.gene76855:CDS
GACGTCCTCGAACTAATCGT+CGG 0.680634 2.2:-39146264 MS.gene76855:CDS
TCATAGCTTAAACACGATGG+AGG 0.690849 2.2:-39146347 MS.gene76855:CDS
ATACTTGTTTGTCAAGTACG+TGG 0.696002 2.2:+39147566 None:intergenic
TCAAGCACAATCATTCCATG+CGG 0.697666 2.2:-39146934 MS.gene76855:CDS
TCCCCTCCCACACCACAATG+TGG 0.710147 2.2:+39146370 None:intergenic
ATTGTGTGTATGATTCTCTG+CGG 0.733784 2.2:-39147239 MS.gene76855:CDS
TCCATGGTATGTGATGCCCG+TGG 0.764195 2.2:-39147834 MS.gene76855:CDS
CCGGAATGTCAACAACACAG+AGG 0.797075 2.2:-39147086 MS.gene76855:CDS
AGATTGATATGCATGCACAG+CGG 0.798983 2.2:-39147908 MS.gene76855:CDS
GTATTGTGTTGATTTCAACG+GGG 0.841514 2.2:-39146728 MS.gene76855:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAAAAAATGATTTCT+GGG - chr2.2:39147214-39147233 MS.gene76855:CDS 10.0%
!!! AAATCATTTTTTAAATAACA+TGG + chr2.2:39147212-39147231 None:intergenic 10.0%
!! AATGTAATCACAATAATAAT+AGG + chr2.2:39148175-39148194 None:intergenic 15.0%
!! GTTATTTAAAAAATGATTTC+TGG - chr2.2:39147213-39147232 MS.gene76855:CDS 15.0%
!! AAGAAAAAAACCAATTGTTT+CGG - chr2.2:39148126-39148145 MS.gene76855:CDS 20.0%
!! ACAACATTCATTGAAAAATA+TGG - chr2.2:39147131-39147150 MS.gene76855:CDS 20.0%
!! ATTCATTGAAAAATATGGTT+TGG - chr2.2:39147136-39147155 MS.gene76855:CDS 20.0%
!! TTCATTGAAAAATATGGTTT+GGG - chr2.2:39147137-39147156 MS.gene76855:CDS 20.0%
! AAAATTGCCGAAAAATTGAA+AGG - chr2.2:39147023-39147042 MS.gene76855:CDS 25.0%
! TGTATGAAGAAATGATCAAA+TGG - chr2.2:39147897-39147916 MS.gene76855:CDS 25.0%
! TTACGAAAATCTAACATTTG+TGG - chr2.2:39146512-39146531 MS.gene76855:CDS 25.0%
!! AAAACTAGAAACTCTAAGAA+AGG - chr2.2:39146168-39146187 MS.gene76855:intron 25.0%
!! AAACTAGAAACTCTAAGAAA+GGG - chr2.2:39146169-39146188 MS.gene76855:intron 25.0%
!! TATCGGTATGTCTTTTAAAT+CGG - chr2.2:39146089-39146108 MS.gene76855:intron 25.0%
!!! AAGTATTGTGTTGATTTCAA+CGG - chr2.2:39147593-39147612 MS.gene76855:CDS 25.0%
!!! ACTTTTAACGGATTAAGAAT+TGG + chr2.2:39148028-39148047 None:intergenic 25.0%
!!! GAAATATTTTAACATGCCAT+CGG + chr2.2:39146196-39146215 None:intergenic 25.0%
!!! TTTTTTCACAATCTTTTCAG+TGG + chr2.2:39148092-39148111 None:intergenic 25.0%
AAAGGATGATCGATCAATAT+AGG + chr2.2:39145961-39145980 None:intergenic 30.0%
ACACAATACTTAGTTTCGTT+CGG + chr2.2:39147584-39147603 None:intergenic 30.0%
AGATAAGTCCAACTAAATCA+CGG - chr2.2:39146373-39146392 MS.gene76855:CDS 30.0%
AGATACAAGTAGAATTTCGT+GGG - chr2.2:39147471-39147490 MS.gene76855:CDS 30.0%
CATTTCTTCATACAAATCAG+AGG + chr2.2:39147891-39147910 None:intergenic 30.0%
TATCTCCATATACTTGTCAT+GGG + chr2.2:39147456-39147475 None:intergenic 30.0%
TTAAAAGACATACCGATAGT+AGG + chr2.2:39146087-39146106 None:intergenic 30.0%
TTATGAAATTGCAGAATGTG+CGG - chr2.2:39147847-39147866 MS.gene76855:CDS 30.0%
! AACATCACCAAAGTATTCAT+AGG + chr2.2:39146724-39146743 None:intergenic 30.0%
! AACTAGAAACTCTAAGAAAG+GGG - chr2.2:39146170-39146189 MS.gene76855:intron 30.0%
! ATGTTAGATTTTCGTAACCA+CGG + chr2.2:39146509-39146528 None:intergenic 30.0%
! CTTTTTCTATGAGATTGACA+TGG - chr2.2:39146644-39146663 MS.gene76855:CDS 30.0%
! TCATGTGCAGAATATTTTCT+GGG - chr2.2:39146677-39146696 MS.gene76855:CDS 30.0%
! TGCGTATCCTTTCAATTTTT+CGG + chr2.2:39147033-39147052 None:intergenic 30.0%
! TTAAAAAATGATTTCTGGGC+CGG - chr2.2:39147218-39147237 MS.gene76855:CDS 30.0%
! TTCATGTGCAGAATATTTTC+TGG - chr2.2:39146676-39146695 MS.gene76855:CDS 30.0%
!! AGTATTGTGTTGATTTCAAC+GGG - chr2.2:39147594-39147613 MS.gene76855:CDS 30.0%
!! ATAACGGTTGCTTTAAAGAA+GGG - chr2.2:39146309-39146328 MS.gene76855:CDS 30.0%
!! GACAATTTTGATAAACGATC+AGG - chr2.2:39146437-39146456 MS.gene76855:CDS 30.0%
!!! AGTATGAATGCTTTTTTCGA+TGG - chr2.2:39147266-39147285 MS.gene76855:CDS 30.0%
!!! TATGTGTGGTTGTAGTTTTT+TGG + chr2.2:39147798-39147817 None:intergenic 30.0%
AAAACCACTAGTTGACTGTT+GGG + chr2.2:39148332-39148351 None:intergenic 35.0%
AAAGGATACGCACAATACAA+AGG - chr2.2:39147041-39147060 MS.gene76855:CDS 35.0%
AAATGCAACTGTTATCTCGA+AGG - chr2.2:39147494-39147513 MS.gene76855:CDS 35.0%
AAATGGTCTAGCAAGAAGTT+GGG - chr2.2:39147914-39147933 MS.gene76855:CDS 35.0%
ACATTACTTCCTATGTCTGA+TGG - chr2.2:39148268-39148287 MS.gene76855:CDS 35.0%
AGGTTGTGTTTCCTAATACT+AGG - chr2.2:39146970-39146989 MS.gene76855:CDS 35.0%
ATACTTGTTTGTCAAGTACG+TGG + chr2.2:39146760-39146779 None:intergenic 35.0%
ATCCTACTTTGCTAGAATGA+GGG - chr2.2:39146608-39146627 MS.gene76855:CDS 35.0%
ATTGTGTGTATGATTCTCTG+CGG - chr2.2:39147084-39147103 MS.gene76855:CDS 35.0%
CATTACTTCCTATGTCTGAT+GGG - chr2.2:39148269-39148288 MS.gene76855:CDS 35.0%
CCACACATAGAAAGATTTGA+AGG - chr2.2:39147809-39147828 MS.gene76855:CDS 35.0%
CCTTCAAATCTTTCTATGTG+TGG + chr2.2:39147812-39147831 None:intergenic 35.0%
CGTGGCAAGATAAATTTAGA+CGG + chr2.2:39147722-39147741 None:intergenic 35.0%
CTAAATTTATCTTGCCACGA+TGG - chr2.2:39147723-39147742 MS.gene76855:CDS 35.0%
CTTGTTTCATGGCATATTCA+CGG + chr2.2:39146137-39146156 None:intergenic 35.0%
GAGATACAAGTAGAATTTCG+TGG - chr2.2:39147470-39147489 MS.gene76855:CDS 35.0%
GATAAATTCACGCCTACTAT+CGG - chr2.2:39146072-39146091 MS.gene76855:intron 35.0%
GGATTAAGAATTGGTTGATC+AGG + chr2.2:39148019-39148038 None:intergenic 35.0%
GTATCTCCATATACTTGTCA+TGG + chr2.2:39147457-39147476 None:intergenic 35.0%
GTGAATATGCCATGAAACAA+GGG - chr2.2:39146136-39146155 MS.gene76855:intron 35.0%
TAAAACCACTAGTTGACTGT+TGG + chr2.2:39148333-39148352 None:intergenic 35.0%
TACAAATCAGAGGTTTGACT+AGG + chr2.2:39147881-39147900 None:intergenic 35.0%
TATCCTACTTTGCTAGAATG+AGG - chr2.2:39146607-39146626 MS.gene76855:CDS 35.0%
TCAGACATAGGAAGTAATGT+AGG + chr2.2:39148268-39148287 None:intergenic 35.0%
TGATCGGTTACAATTCCTAT+TGG + chr2.2:39146924-39146943 None:intergenic 35.0%
TGATGATTGACACCAACAAA+CGG + chr2.2:39146798-39146817 None:intergenic 35.0%
TGATTGCTCAGCTAAGATAA+CGG - chr2.2:39146293-39146312 MS.gene76855:CDS 35.0%
TGTTTCCTAATACTAGGCAT+AGG - chr2.2:39146976-39146995 MS.gene76855:CDS 35.0%
TTGAAATTGTCTCTCGATTG+TGG + chr2.2:39147423-39147442 None:intergenic 35.0%
! AGGAATACGAGGTAGATTTT+CGG - chr2.2:39147363-39147382 MS.gene76855:CDS 35.0%
! ATCTACATACACCGTTTTAG+AGG - chr2.2:39147538-39147557 MS.gene76855:CDS 35.0%
! ATGGTTTGGGTGAAAATGAT+TGG - chr2.2:39147150-39147169 MS.gene76855:CDS 35.0%
! ATTCTAACTTGTGCAAGAGA+AGG - chr2.2:39146216-39146235 MS.gene76855:CDS 35.0%
! CAATCCATTTTACTAGGTTG+CGG - chr2.2:39146822-39146841 MS.gene76855:CDS 35.0%
! GACAATACTCTCCTCTAAAA+CGG + chr2.2:39147552-39147571 None:intergenic 35.0%
! TGAATACCATTTTCGAAGAG+CGG - chr2.2:39147174-39147193 MS.gene76855:CDS 35.0%
! TGTTAGATTTTCGTAACCAC+GGG + chr2.2:39146508-39146527 None:intergenic 35.0%
! TTCACATTTTTACTCCATCG+TGG + chr2.2:39147740-39147759 None:intergenic 35.0%
! TTGGTGGTATGTTTGATTCA+TGG + chr2.2:39146245-39146264 None:intergenic 35.0%
! TTTCACAATCTTTTCAGTGG+TGG + chr2.2:39148089-39148108 None:intergenic 35.0%
!! ATTTGTTGTTTCAAAGGTCC+CGG + chr2.2:39146040-39146059 None:intergenic 35.0%
!! ATTTTGATAAACGATCAGGC+AGG - chr2.2:39146441-39146460 MS.gene76855:CDS 35.0%
!! GACAGCATTTGTTGTTTCAA+AGG + chr2.2:39146046-39146065 None:intergenic 35.0%
!! GATAACGGTTGCTTTAAAGA+AGG - chr2.2:39146308-39146327 MS.gene76855:CDS 35.0%
!! GTATTGTGTTGATTTCAACG+GGG - chr2.2:39147595-39147614 MS.gene76855:CDS 35.0%
!! TTGCTTTAAAGAAGGGTCTA+TGG - chr2.2:39146316-39146335 MS.gene76855:CDS 35.0%
!! TTGTTGGTGTCAATCATCAT+GGG - chr2.2:39146799-39146818 MS.gene76855:CDS 35.0%
!! TTTGTTGGTGTCAATCATCA+TGG - chr2.2:39146798-39146817 MS.gene76855:CDS 35.0%
!!! GGGTTGATGATTTTGTTGTT+GGG - chr2.2:39147105-39147124 MS.gene76855:CDS 35.0%
!!! TTGATGATTTTGTTGTTGGG+TGG - chr2.2:39147108-39147127 MS.gene76855:CDS 35.0%
AAGACCGCAACCTAGTAAAA+TGG + chr2.2:39146829-39146848 None:intergenic 40.0%
AAGATACCAAGTCCTTTACC+TGG - chr2.2:39146859-39146878 MS.gene76855:CDS 40.0%
AATTGTAACCGATCAGTGCA+AGG - chr2.2:39146929-39146948 MS.gene76855:CDS 40.0%
ACTAAATCACGGTTGTTTGC+TGG - chr2.2:39146384-39146403 MS.gene76855:CDS 40.0%
ACTTCGACAACCGAAACAAT+TGG + chr2.2:39148139-39148158 None:intergenic 40.0%
AGATTGATATGCATGCACAG+CGG - chr2.2:39146415-39146434 MS.gene76855:CDS 40.0%
AGGTCTGCCTATGAATACTT+TGG - chr2.2:39146714-39146733 MS.gene76855:CDS 40.0%
ATACTTGTCATGGGTGTACT+CGG + chr2.2:39147447-39147466 None:intergenic 40.0%
ATGAGTTTACAGCCACATTG+TGG - chr2.2:39147941-39147960 MS.gene76855:CDS 40.0%
ATGATTGACACCAACAAACG+GGG + chr2.2:39146796-39146815 None:intergenic 40.0%
CAAAAGAAAGACACCTTCTC+GGG - chr2.2:39146559-39146578 MS.gene76855:CDS 40.0%
CAAATGGTCTAGCAAGAAGT+TGG - chr2.2:39147913-39147932 MS.gene76855:CDS 40.0%
CATCCTTTATTACCCCTTGA+CGG - chr2.2:39145973-39145992 MS.gene76855:CDS 40.0%
CGTGAATATGCCATGAAACA+AGG - chr2.2:39146135-39146154 MS.gene76855:intron 40.0%
GAACAAAAGTTTCCGTTCCA+TGG - chr2.2:39146473-39146492 MS.gene76855:CDS 40.0%
GAAGTAGTTAAGCGTATCAC+CGG + chr2.2:39148305-39148324 None:intergenic 40.0%
GAGAGATGTCAGAAACTTTG+TGG - chr2.2:39146536-39146555 MS.gene76855:CDS 40.0%
GAGCAATCAAGTTTCTTCGT+TGG + chr2.2:39146282-39146301 None:intergenic 40.0%
GATGATTGACACCAACAAAC+GGG + chr2.2:39146797-39146816 None:intergenic 40.0%
GCAAAAGAAAGACACCTTCT+CGG - chr2.2:39146558-39146577 MS.gene76855:CDS 40.0%
GCAAACAACCGTGATTTAGT+TGG + chr2.2:39146384-39146403 None:intergenic 40.0%
GGATCATAGCTTAAACACGA+TGG - chr2.2:39147973-39147992 MS.gene76855:CDS 40.0%
GGATGATCGATCAATATAGG+AGG + chr2.2:39145958-39145977 None:intergenic 40.0%
GTACACCCATGACAAGTATA+TGG - chr2.2:39147448-39147467 MS.gene76855:CDS 40.0%
GTTGGATTCGTCTTCAAAGT+TGG + chr2.2:39146264-39146283 None:intergenic 40.0%
TCAAGCACAATCATTCCATG+CGG - chr2.2:39147389-39147408 MS.gene76855:CDS 40.0%
TCATAGCTTAAACACGATGG+AGG - chr2.2:39147976-39147995 MS.gene76855:CDS 40.0%
TCGGTTACAATTCCTATTGG+AGG + chr2.2:39146921-39146940 None:intergenic 40.0%
TGCATCAATGAGCAAAGATG+TGG - chr2.2:39148363-39148382 MS.gene76855:CDS 40.0%
TGGTCATCTTAGAGTGAAAG+AGG - chr2.2:39147694-39147713 MS.gene76855:CDS 40.0%
TGTTTCGAACAACCAGGTAA+AGG + chr2.2:39146874-39146893 None:intergenic 40.0%
TTACCTGGTTGTTCGAAACA+TGG - chr2.2:39146874-39146893 MS.gene76855:CDS 40.0%
TTCCCTCATTCTAGCAAAGT+AGG + chr2.2:39146613-39146632 None:intergenic 40.0%
TTCCTAATACTAGGCATAGG+TGG - chr2.2:39146979-39146998 MS.gene76855:CDS 40.0%
TTGTGTGTATGATTCTCTGC+GGG - chr2.2:39147085-39147104 MS.gene76855:CDS 40.0%
TTTCGGTTGTCGAAGTAAGT+TGG - chr2.2:39148143-39148162 MS.gene76855:CDS 40.0%
! CATGGGCAATCCATTTTACT+AGG - chr2.2:39146816-39146835 MS.gene76855:CDS 40.0%
! CCCTTACGTGGTACTTTTAA+CGG + chr2.2:39148040-39148059 None:intergenic 40.0%
! GAATACCATTTTCGAAGAGC+GGG - chr2.2:39147175-39147194 MS.gene76855:CDS 40.0%
!! AGACATGCGCTTTTTGTACT+TGG - chr2.2:39147674-39147693 MS.gene76855:CDS 40.0%
!! ATTCCTTTTCAGCCTTGTCT+TGG + chr2.2:39147349-39147368 None:intergenic 40.0%
!! CCGTTAAAAGTACCACGTAA+GGG - chr2.2:39148037-39148056 MS.gene76855:CDS 40.0%
!! TCCGTTAAAAGTACCACGTA+AGG - chr2.2:39148036-39148055 MS.gene76855:CDS 40.0%
!! TGTTTGCTGTTTGAGTTCAG+AGG - chr2.2:39147641-39147660 MS.gene76855:CDS 40.0%
!! TTAGAGGAGAGTATTGTCTG+TGG - chr2.2:39147554-39147573 MS.gene76855:CDS 40.0%
!!! CGGGTTGATGATTTTGTTGT+TGG - chr2.2:39147104-39147123 MS.gene76855:CDS 40.0%
ACTCCAAGACAAGGCTGAAA+AGG - chr2.2:39147343-39147362 MS.gene76855:CDS 45.0%
ATTGTGGAATTTGACCCGCA+TGG + chr2.2:39147407-39147426 None:intergenic 45.0%
CAAGCACAATCATTCCATGC+GGG - chr2.2:39147390-39147409 MS.gene76855:CDS 45.0%
CAAGGCTGAAAAGGAATACG+AGG - chr2.2:39147352-39147371 MS.gene76855:CDS 45.0%
CACCACCTATGCCTAGTATT+AGG + chr2.2:39146984-39147003 None:intergenic 45.0%
CTATGAGATTGACATGGACG+AGG - chr2.2:39146650-39146669 MS.gene76855:CDS 45.0%
GAACAACCAGGTAAAGGACT+TGG + chr2.2:39146868-39146887 None:intergenic 45.0%
GCTTGAAACCCATCAGACAT+AGG + chr2.2:39148280-39148299 None:intergenic 45.0%
GGATTCGTCTTCAAAGTTGG+TGG + chr2.2:39146261-39146280 None:intergenic 45.0%
GGCTATGCAGAATGCAATTC+AGG - chr2.2:39146950-39146969 MS.gene76855:CDS 45.0%
GGTTGTTCGAAACATGGCTA+AGG - chr2.2:39146880-39146899 MS.gene76855:CDS 45.0%
TAAACGATCAGGCAGGTGTA+CGG - chr2.2:39146448-39146467 MS.gene76855:CDS 45.0%
TAGCCATGTTTCGAACAACC+AGG + chr2.2:39146880-39146899 None:intergenic 45.0%
TCATCCCAACAGTCAACTAG+TGG - chr2.2:39148325-39148344 MS.gene76855:CDS 45.0%
TCTCCGTCAAGGGGTAATAA+AGG + chr2.2:39145979-39145998 None:intergenic 45.0%
TCTTTCCCGCTCTTCGAAAA+TGG + chr2.2:39147183-39147202 None:intergenic 45.0%
TTACAGCCACATTGTGGTGT+GGG - chr2.2:39147947-39147966 MS.gene76855:CDS 45.0%
TTTACAGCCACATTGTGGTG+TGG - chr2.2:39147946-39147965 MS.gene76855:CDS 45.0%
TTTCGAAGAGCGGGAAAGAT+GGG - chr2.2:39147184-39147203 MS.gene76855:CDS 45.0%
! CCTCTGTGTTGTTGACATTC+CGG + chr2.2:39147240-39147259 None:intergenic 45.0%
! GATCGCAAACCCTTGTTTCA+TGG + chr2.2:39146148-39146167 None:intergenic 45.0%
! TCTCGAAGGTGTGACTACAT+TGG - chr2.2:39147508-39147527 MS.gene76855:CDS 45.0%
! TTTTCGAAGAGCGGGAAAGA+TGG - chr2.2:39147183-39147202 MS.gene76855:CDS 45.0%
AAACGATCAGGCAGGTGTAC+GGG - chr2.2:39146449-39146468 MS.gene76855:CDS 50.0%
ACACCAACAAACGGGGCAAA+TGG + chr2.2:39146789-39146808 None:intergenic 50.0%
AGAAAGACACCTTCTCGGGA+AGG - chr2.2:39146563-39146582 MS.gene76855:CDS 50.0%
ATGTCTTCGAGGCCTCCAAT+AGG - chr2.2:39146906-39146925 MS.gene76855:CDS 50.0%
CCGGAATGTCAACAACACAG+AGG - chr2.2:39147237-39147256 MS.gene76855:CDS 50.0%
CTAGGCATAGGTGGTGTCTA+TGG - chr2.2:39146988-39147007 MS.gene76855:CDS 50.0%
GACGTCCTCGAACTAATCGT+CGG - chr2.2:39148059-39148078 MS.gene76855:CDS 50.0%
GGCTAAGGTGTATGTCTTCG+AGG - chr2.2:39146895-39146914 MS.gene76855:CDS 50.0%
GGGCATCACATACCATGGAA+CGG + chr2.2:39146488-39146507 None:intergenic 50.0%
! AACTCTAAGAAAGGGGCCGA+TGG - chr2.2:39146177-39146196 MS.gene76855:intron 50.0%
! ATCAGCTAGCTCTCCGTCAA+GGG + chr2.2:39145989-39146008 None:intergenic 50.0%
! ATGCCATTTGCCCCGTTTGT+TGG - chr2.2:39146783-39146802 MS.gene76855:CDS 50.0%
! CGTGTTGACGTTTCGGATTC+CGG - chr2.2:39146018-39146037 MS.gene76855:CDS 50.0%
! CTGCATAGCCTTGCACTGAT+CGG + chr2.2:39146940-39146959 None:intergenic 50.0%
! GACAACCGACGATTAGTTCG+AGG + chr2.2:39148067-39148086 None:intergenic 50.0%
! GTGTTGACGTTTCGGATTCC+GGG - chr2.2:39146019-39146038 MS.gene76855:CDS 50.0%
!! TCTGATGGGTTTCAAGCGTC+CGG - chr2.2:39148283-39148302 MS.gene76855:CDS 50.0%
ACCACGGGCATCACATACCA+TGG + chr2.2:39146493-39146512 None:intergenic 55.0%
AGACACCTTCTCGGGAAGGA+AGG - chr2.2:39146567-39146586 MS.gene76855:CDS 55.0%
AGCCACATTGTGGTGTGGGA+GGG - chr2.2:39147951-39147970 MS.gene76855:CDS 55.0%
CATCTCCTTCCTTCCCGAGA+AGG + chr2.2:39146575-39146594 None:intergenic 55.0%
CGACAACGCACTCCAAGACA+AGG - chr2.2:39147334-39147353 MS.gene76855:CDS 55.0%
CTTCTCGGGAAGGAAGGAGA+TGG - chr2.2:39146573-39146592 MS.gene76855:CDS 55.0%
CTTGACGGAGAGCTAGCTGA+TGG - chr2.2:39145988-39146007 MS.gene76855:CDS 55.0%
TCCATGGTATGTGATGCCCG+TGG - chr2.2:39146489-39146508 MS.gene76855:CDS 55.0%
TCTGGGCTGATGCACGTAGT+AGG - chr2.2:39146694-39146713 MS.gene76855:CDS 55.0%
! CATCAGCTAGCTCTCCGTCA+AGG + chr2.2:39145990-39146009 None:intergenic 55.0%
! TCAGCTAGCTCTCCGTCAAG+GGG + chr2.2:39145988-39146007 None:intergenic 55.0%
! TGCGGCTCGTGTTGACGTTT+CGG - chr2.2:39146011-39146030 MS.gene76855:CDS 55.0%
CAGCCACATTGTGGTGTGGG+AGG - chr2.2:39147950-39147969 MS.gene76855:CDS 60.0%
CGGGAAGGAAGGAGATGGCA+GGG - chr2.2:39146578-39146597 MS.gene76855:CDS 60.0%
GCCACATTGTGGTGTGGGAG+GGG - chr2.2:39147952-39147971 MS.gene76855:CDS 60.0%
GTTCGAGGACGTCCCTTACG+TGG + chr2.2:39148052-39148071 None:intergenic 60.0%
TCCCCTCCCACACCACAATG+TGG + chr2.2:39147956-39147975 None:intergenic 60.0%
TCGGGAAGGAAGGAGATGGC+AGG - chr2.2:39146577-39146596 MS.gene76855:CDS 60.0%
! CGGAGAGCTAGCTGATGGTG+CGG - chr2.2:39145993-39146012 MS.gene76855:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 39145943 39148402 39145943 ID=MS.gene76855
chr2.2 mRNA 39145943 39148402 39145943 ID=MS.gene76855.t1;Parent=MS.gene76855
chr2.2 exon 39146189 39148402 39146189 ID=MS.gene76855.t1.exon1;Parent=MS.gene76855.t1
chr2.2 CDS 39146189 39148402 39146189 ID=cds.MS.gene76855.t1;Parent=MS.gene76855.t1
chr2.2 exon 39145943 39146080 39145943 ID=MS.gene76855.t1.exon2;Parent=MS.gene76855.t1
chr2.2 CDS 39145943 39146080 39145943 ID=cds.MS.gene76855.t1;Parent=MS.gene76855.t1
Gene Sequence

>MS.gene76855

ATGGCTGATGGTCCTCCTATATTGATCGATCATCCTTTATTACCCCTTGACGGAGAGCTAGCTGATGGTGCGGCTCGTGTTGACGTTTCGGATTCCGGGACCTTTGAAACAACAAATGCTGTCGCAACAGATAAATTCACGCCTACTATCGGTATGTCTTTTAAATCGGTTGCAGATTGTAAGTCTTTTTACCGTGAATATGCCATGAAACAAGGGTTTGCGATCAAAACTAGAAACTCTAAGAAAGGGGCCGATGGCATGTTAAAATATTTCATTCTAACTTGTGCAAGAGAAGGTCACCATGAATCAAACATACCACCAACTTTGAAGACGAATCCAACGAAGAAACTTGATTGCTCAGCTAAGATAACGGTTGCTTTAAAGAAGGGTCTATGGACTATTTTGTCTTTTAATTCATGTCATAATCATGAGATAAGTCCAACTAAATCACGGTTGTTTGCTGGCAATAAGAAGATTGATATGCATGCACAGCGGACAATTTTGATAAACGATCAGGCAGGTGTACGGGTGAACAAAAGTTTCCGTTCCATGGTATGTGATGCCCGTGGTTACGAAAATCTAACATTTGTGGAGAGAGATGTCAGAAACTTTGTGGCAAAAGAAAGACACCTTCTCGGGAAGGAAGGAGATGGCAGGGCACTTTTATCCTACTTTGCTAGAATGAGGGAATGCAACAAAGACTTTTTCTATGAGATTGACATGGACGAGGACTTTCATGTGCAGAATATTTTCTGGGCTGATGCACGTAGTAGGTCTGCCTATGAATACTTTGGTGATGTTGTCACATTCGATACCACGTACTTGACAAACAAGTATGACATGCCATTTGCCCCGTTTGTTGGTGTCAATCATCATGGGCAATCCATTTTACTAGGTTGCGGTCTTTTATCATCTGAAGATACCAAGTCCTTTACCTGGTTGTTCGAAACATGGCTAAGGTGTATGTCTTCGAGGCCTCCAATAGGAATTGTAACCGATCAGTGCAAGGCTATGCAGAATGCAATTCAGGTTGTGTTTCCTAATACTAGGCATAGGTGGTGTCTATGGCATATAATGAGAAAAATTGCCGAAAAATTGAAAGGATACGCACAATACAAAGGAATAAAAAATGATATGAAAAATTGTGTGTATGATTCTCTGCGGGTTGATGATTTTGTTGTTGGGTGGACAACATTCATTGAAAAATATGGTTTGGGTGAAAATGATTGGTTGAATACCATTTTCGAAGAGCGGGAAAGATGGGTGCCATGTTATTTAAAAAATGATTTCTGGGCCGGAATGTCAACAACACAGAGGAGTGAAAGTATGAATGCTTTTTTCGATGGTTACATTAATGCAAGAACTTCTCTAAGCGAATTTGTAAAGCAATACGACAACGCACTCCAAGACAAGGCTGAAAAGGAATACGAGGTAGATTTTCGGTCTTCAAGCACAATCATTCCATGCGGGTCAAATTCCACAATCGAGAGACAATTTCAAGCCGAGTACACCCATGACAAGTATATGGAGATACAAGTAGAATTTCGTGGGAAATGCAACTGTTATCTCGAAGGTGTGACTACATTGGAATTTACATCTACATACACCGTTTTAGAGGAGAGTATTGTCTGTGGTAAACCGAACGAAACTAAGTATTGTGTTGATTTCAACGGGGAAGACAATAATGTTACGTGCACTTGTTTGCTGTTTGAGTTCAGAGGCATTTTGTGTAGACATGCGCTTTTTGTACTTGGTCATCTTAGAGTGAAAGAGGTTCCGTCTAAATTTATCTTGCCACGATGGAGTAAAAATGTGAAGAGAAAATATGCACACATGAAGACAAGTTACAATGCCAAAAAACTACAACCACACATAGAAAGATTTGAAGGTCTTTGCAAGACATTTTATGAAATTGCAGAATGTGCGGCTGAGACACCTAGTCAAACCTCTGATTTGTATGAAGAAATGATCAAATGGTCTAGCAAGAAGTTGGGCAAAATGAGTTTACAGCCACATTGTGGTGTGGGAGGGGATCATAGCTTAAACACGATGGAGGACTCATTATCACAGCAACCTGATCAACCAATTCTTAATCCGTTAAAAGTACCACGTAAGGGACGTCCTCGAACTAATCGTCGGTTGTCCACCACTGAAAAGATTGTGAAAAAAAGAAGCAAAATGCAAAGAAAAAAACCAATTGTTTCGGTTGTCGAAGTAAGTTGGTGTTAACCTATTATTATTGTGATTACATTTGTTTTTTTAATAATAATACAATGTTAATTATGTTAAATGTAATTAATATTTCACTCTGTAATACTACAGCCTACATTACTTCCTATGTCTGATGGGTTTCAAGCGTCCGGTGATACGCTTAACTACTTCTCATCCCAACAGTCAACTAGTGGTTTTATGTCATTACTTGCATCAATGAGCAAAGATGTGGACGCAGCTGAATTTTAA
Protein sequence

>MS.gene76855.t1

MADGPPILIDHPLLPLDGELADGAARVDVSDSGTFETTNAVATDKFTPTIGMSFKSVADCKSFYREYAMKQGFAIKTRNSKKGADGMLKYFILTCAREGHHESNIPPTLKTNPTKKLDCSAKITVALKKGLWTILSFNSCHNHEISPTKSRLFAGNKKIDMHAQRTILINDQAGVRVNKSFRSMVCDARGYENLTFVERDVRNFVAKERHLLGKEGDGRALLSYFARMRECNKDFFYEIDMDEDFHVQNIFWADARSRSAYEYFGDVVTFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLLSSEDTKSFTWLFETWLRCMSSRPPIGIVTDQCKAMQNAIQVVFPNTRHRWCLWHIMRKIAEKLKGYAQYKGIKNDMKNCVYDSLRVDDFVVGWTTFIEKYGLGENDWLNTIFEERERWVPCYLKNDFWAGMSTTQRSESMNAFFDGYINARTSLSEFVKQYDNALQDKAEKEYEVDFRSSSTIIPCGSNSTIERQFQAEYTHDKYMEIQVEFRGKCNCYLEGVTTLEFTSTYTVLEESIVCGKPNETKYCVDFNGEDNNVTCTCLLFEFRGILCRHALFVLGHLRVKEVPSKFILPRWSKNVKRKYAHMKTSYNAKKLQPHIERFEGLCKTFYEIAECAAETPSQTSDLYEEMIKWSSKKLGKMSLQPHCGVGGDHSLNTMEDSLSQQPDQPILNPLKVPRKGRPRTNRRLSTTEKIVKKRSKMQRKKPIVSVVEPTLLPMSDGFQASGDTLNYFSSQQSTSGFMSLLASMSKDVDAAEF