Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77065.t1 | RHN44987.1 | 97.2 | 253 | 7 | 0 | 1 | 253 | 1 | 253 | 2.00E-134 | 488.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77065.t1 | Q7ZZ00 | 33.8 | 231 | 131 | 4 | 13 | 230 | 49 | 270 | 1.1e-27 | 125.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77065.t1 | A0A396H268 | 97.2 | 253 | 7 | 0 | 1 | 253 | 1 | 253 | 1.4e-134 | 488.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene77065.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77065.t1 | MTR_7g029095 | 83.794 | 253 | 7 | 1 | 1 | 253 | 1 | 219 | 9.49e-153 | 424 |
| MS.gene77065.t1 | MTR_7g029090 | 97.884 | 189 | 4 | 0 | 65 | 253 | 3 | 191 | 2.43e-138 | 387 |
| MS.gene77065.t1 | MTR_7g029065 | 78.378 | 111 | 22 | 2 | 136 | 245 | 429 | 538 | 1.44e-48 | 168 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77065.t1 | AT5G14140 | 63.563 | 247 | 81 | 4 | 11 | 249 | 14 | 259 | 9.51e-112 | 322 |
Find 60 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTCATGATTCTTTCTTTC+AGG | 0.183557 | 7.3:-71184022 | MS.gene77065:CDS |
| GAAGTCTTCTGTCCCATTGC+TGG | 0.271752 | 7.3:-71184171 | MS.gene77065:CDS |
| GGGTTGGAACTTACGTGAAA+TGG | 0.341316 | 7.3:+71185517 | None:intergenic |
| TGCTGGGTGTGGAGCGCGTT+TGG | 0.354156 | 7.3:-71184154 | MS.gene77065:CDS |
| CATATAGTATGAATGTTTAG+TGG | 0.382154 | 7.3:-71183066 | MS.gene77065:intron |
| TTTATCCTGTGTTTCTTTGA+AGG | 0.386367 | 7.3:+71182942 | None:intergenic |
| TTCTGTCCCATTGCTGGGTG+TGG | 0.397837 | 7.3:-71184165 | MS.gene77065:CDS |
| CAAAACGGAAAATTTGAATC+CGG | 0.397939 | 7.3:+71185545 | None:intergenic |
| ATGACATGCCTTTGGTGTTA+CGG | 0.399250 | 7.3:+71182778 | None:intergenic |
| ACGAGAACTTCTTGTCAAAC+AGG | 0.415459 | 7.3:-71185462 | MS.gene77065:intron |
| TCTCAAAAGGAGGATACTTC+AGG | 0.418130 | 7.3:-71182900 | MS.gene77065:CDS |
| TGACAAGAAGTTCTCGTTCA+AGG | 0.428214 | 7.3:+71185468 | None:intergenic |
| CGTGAAATGGGTTTCCAAAA+CGG | 0.438517 | 7.3:+71185530 | None:intergenic |
| CGCGCTCCACACCCAGCAAT+GGG | 0.438523 | 7.3:+71184159 | None:intergenic |
| ACTCCTTCCTCTATCAGCTT+TGG | 0.443914 | 7.3:-71182804 | MS.gene77065:CDS |
| GGTTGGAACTTACGTGAAAT+GGG | 0.448158 | 7.3:+71185518 | None:intergenic |
| GACTCTAGAACACACAGAAC+AGG | 0.456459 | 7.3:+71184083 | None:intergenic |
| AAGTCTTCTGTCCCATTGCT+GGG | 0.459510 | 7.3:-71184170 | MS.gene77065:CDS |
| GGAGGATACTTCAGGAATGA+TGG | 0.477569 | 7.3:-71182892 | MS.gene77065:CDS |
| AGGGACAAATGACATGCCTT+TGG | 0.478422 | 7.3:+71182770 | None:intergenic |
| GGAAGTGGAAAATCAAAATC+CGG | 0.482912 | 7.3:-71185564 | MS.gene77065:CDS |
| AAAGAAAGAATCATGAGCTT+CGG | 0.485050 | 7.3:+71184026 | None:intergenic |
| GATAGCGAAGAAAGGTGAAT+CGG | 0.497649 | 7.3:+71185496 | None:intergenic |
| AATTCAAAAGCTACAAAAGT+AGG | 0.497972 | 7.3:-71183028 | MS.gene77065:CDS |
| CGAGCTGTTCAGCGTGGGAA+AGG | 0.500378 | 7.3:-71182747 | MS.gene77065:CDS |
| GTAAGCTTATTTCTTAGTAA+CGG | 0.507580 | 7.3:+71182707 | None:intergenic |
| GATTCACCTTTCTTCGCTAT+CGG | 0.511476 | 7.3:-71185494 | MS.gene77065:CDS |
| TTAATTTGAAAAGGTTGCGT+TGG | 0.527267 | 7.3:-71185344 | MS.gene77065:intron |
| ACGCGCTCCACACCCAGCAA+TGG | 0.530230 | 7.3:+71184158 | None:intergenic |
| CGAAGAAAGGTGAATCGGGT+TGG | 0.552955 | 7.3:+71185501 | None:intergenic |
| ATTTGAATTAACACAAGAGA+AGG | 0.553168 | 7.3:-71185320 | MS.gene77065:CDS |
| TAGTATGAATGTTTAGTGGA+AGG | 0.553562 | 7.3:-71183062 | MS.gene77065:CDS |
| CTCTGCCTTCAAAGAAACAC+AGG | 0.556458 | 7.3:-71182947 | MS.gene77065:CDS |
| ACGGCGACCAAAGCTGATAG+AGG | 0.559633 | 7.3:+71182797 | None:intergenic |
| TACTTCAGGAATGATGGAAG+TGG | 0.560728 | 7.3:-71182886 | MS.gene77065:CDS |
| GGAAGTGGAAAATGCAGCTA+TGG | 0.560741 | 7.3:-71182871 | MS.gene77065:CDS |
| ATTTGATACAAGAGGATGGA+AGG | 0.563551 | 7.3:-71185285 | MS.gene77065:intron |
| TCCCTCGAGCTGTTCAGCGT+GGG | 0.564627 | 7.3:-71182752 | MS.gene77065:CDS |
| ATAGCGAAGAAAGGTGAATC+GGG | 0.565377 | 7.3:+71185497 | None:intergenic |
| GAATGTTTAGTGGAAGGGTG+CGG | 0.566139 | 7.3:-71183056 | MS.gene77065:CDS |
| CGTGGGAAAGGATCTAACTC+TGG | 0.568460 | 7.3:-71182735 | MS.gene77065:CDS |
| AGTATGAATGTTTAGTGGAA+GGG | 0.570063 | 7.3:-71183061 | MS.gene77065:CDS |
| GTCCCTCGAGCTGTTCAGCG+TGG | 0.579249 | 7.3:-71182753 | MS.gene77065:CDS |
| TTCCCACGCTGAACAGCTCG+AGG | 0.579646 | 7.3:+71182750 | None:intergenic |
| GATTGAACTAGCGATGGAAG+TGG | 0.579669 | 7.3:-71185579 | None:intergenic |
| AGGTTACCGATAGCGAAGAA+AGG | 0.582602 | 7.3:+71185488 | None:intergenic |
| ACTTGAGGATTTGATACAAG+AGG | 0.586261 | 7.3:-71185293 | MS.gene77065:CDS |
| ACAAGAGAAGGAACAACTTG+AGG | 0.601231 | 7.3:-71185308 | MS.gene77065:CDS |
| CGACCAAAGCTGATAGAGGA+AGG | 0.601809 | 7.3:+71182801 | None:intergenic |
| TATGCTGAGCAAACGTGATG+TGG | 0.604052 | 7.3:+71184056 | None:intergenic |
| TTTCAGGCAAAAGTTGCTCG+TGG | 0.610110 | 7.3:-71184006 | MS.gene77065:CDS |
| GAGGATTTGATACAAGAGGA+TGG | 0.612020 | 7.3:-71185289 | MS.gene77065:CDS |
| TTTGGTCGCCGTAACACCAA+AGG | 0.617378 | 7.3:-71182786 | MS.gene77065:CDS |
| ATGCTGAGCAAACGTGATGT+GGG | 0.625974 | 7.3:+71184057 | None:intergenic |
| AGTTGCTCGTGGCTATGACA+TGG | 0.638718 | 7.3:-71183995 | MS.gene77065:intron |
| AGTATCTAGATTAAACACTT+CGG | 0.640860 | 7.3:-71182832 | MS.gene77065:CDS |
| TCCCACGCTGAACAGCTCGA+GGG | 0.661255 | 7.3:+71182751 | None:intergenic |
| AAAGCTGATAGAGGAAGGAG+TGG | 0.665134 | 7.3:+71182806 | None:intergenic |
| ATCTAGATACTGCTGAAACG+AGG | 0.692577 | 7.3:+71182844 | None:intergenic |
| TGCTGAGCAAACGTGATGTG+GGG | 0.701816 | 7.3:+71184058 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAACCAAATTATAAAAA+AGG | + | chr7.3:71184468-71184487 | None:intergenic | 10.0% |
| !! | AAATTAAATAGAAGATATAA+AGG | + | chr7.3:71184529-71184548 | None:intergenic | 10.0% |
| !! | TCAAAAATAAAAAAAGAATA+AGG | - | chr7.3:71183605-71183624 | MS.gene77065:intron | 10.0% |
| !! | TTGAATTTATACTTATAAAA+TGG | - | chr7.3:71184043-71184062 | MS.gene77065:CDS | 10.0% |
| !!! | ATTTGTAAGATTTTAAATTA+AGG | + | chr7.3:71184431-71184450 | None:intergenic | 10.0% |
| !! | AAATAATAGGTATTAGAATA+AGG | - | chr7.3:71183292-71183311 | MS.gene77065:intron | 15.0% |
| !! | AACTAAAATAGTAAACAAAA+AGG | + | chr7.3:71184850-71184869 | None:intergenic | 15.0% |
| !! | GTTATAGATAATTAATGATA+GGG | - | chr7.3:71185005-71185024 | MS.gene77065:intron | 15.0% |
| !!! | TATGATTTAATTTAATGACA+TGG | - | chr7.3:71184331-71184350 | MS.gene77065:intron | 15.0% |
| !!! | TATTCTAATACCTATTATTT+TGG | + | chr7.3:71183292-71183311 | None:intergenic | 15.0% |
| !! | AAATAATAGGCATTAGAATA+AGG | - | chr7.3:71183466-71183485 | MS.gene77065:intron | 20.0% |
| !! | AAGAAGGATTTCAAATTAAA+TGG | - | chr7.3:71184976-71184995 | MS.gene77065:intron | 20.0% |
| !! | AATTTCAAGAACTATAAGAA+AGG | + | chr7.3:71183775-71183794 | None:intergenic | 20.0% |
| !! | CGTTATAGATAATTAATGAT+AGG | - | chr7.3:71185004-71185023 | MS.gene77065:intron | 20.0% |
| !! | TATATCTGTAATCATTTATG+TGG | - | chr7.3:71183803-71183822 | MS.gene77065:intron | 20.0% |
| !! | TGATTTAATACACTGTTATT+AGG | - | chr7.3:71183633-71183652 | MS.gene77065:intron | 20.0% |
| !! | TTATTACGTAGAGATAATAT+GGG | + | chr7.3:71184782-71184801 | None:intergenic | 20.0% |
| !!! | ACATATGAATTTTCTCTATT+AGG | - | chr7.3:71185148-71185167 | MS.gene77065:intron | 20.0% |
| !!! | ATGATTTTGAAATCAAAGAT+TGG | + | chr7.3:71184707-71184726 | None:intergenic | 20.0% |
| !!! | GAAAGACCTTTTTTATAATT+TGG | - | chr7.3:71184459-71184478 | MS.gene77065:intron | 20.0% |
| !!! | GTAAGATTTTAAATTAAGGT+AGG | + | chr7.3:71184427-71184446 | None:intergenic | 20.0% |
| !!! | TATTCTAATGCCTATTATTT+TGG | + | chr7.3:71183466-71183485 | None:intergenic | 20.0% |
| !!! | TGATTTTGAAATCAAAGATT+GGG | + | chr7.3:71184706-71184725 | None:intergenic | 20.0% |
| !!! | TGTATCTTTTATCAACATAA+CGG | - | chr7.3:71183925-71183944 | MS.gene77065:intron | 20.0% |
| !!! | TTGTTATTTGAAACATACAA+TGG | + | chr7.3:71183855-71183874 | None:intergenic | 20.0% |
| ! | AAAATCACAATCTTCAACAA+AGG | + | chr7.3:71184001-71184020 | None:intergenic | 25.0% |
| ! | AAATGACAATCTCTATAACA+TGG | - | chr7.3:71185175-71185194 | MS.gene77065:intron | 25.0% |
| ! | AAGCAATATGTTACAAAATG+AGG | + | chr7.3:71184080-71184099 | None:intergenic | 25.0% |
| ! | AATTCAAAAGCTACAAAAGT+AGG | - | chr7.3:71185251-71185270 | MS.gene77065:intron | 25.0% |
| ! | AGAGTTAAGACCAAAATAAT+AGG | - | chr7.3:71183279-71183298 | MS.gene77065:intron | 25.0% |
| ! | AGATATAAAGGATGTAACAA+AGG | + | chr7.3:71184517-71184536 | None:intergenic | 25.0% |
| ! | AGTATCTAGATTAAACACTT+CGG | - | chr7.3:71185447-71185466 | MS.gene77065:intron | 25.0% |
| ! | ATTTGAATTAACACAAGAGA+AGG | - | chr7.3:71182959-71182978 | MS.gene77065:CDS | 25.0% |
| ! | CATATAGTATGAATGTTTAG+TGG | - | chr7.3:71185213-71185232 | MS.gene77065:intron | 25.0% |
| ! | GTTATTACGTAGAGATAATA+TGG | + | chr7.3:71184783-71184802 | None:intergenic | 25.0% |
| ! | TATAGGTCAAATCATTAAGA+AGG | - | chr7.3:71184960-71184979 | MS.gene77065:intron | 25.0% |
| !! | TGTTGATAAAAGATACACTT+TGG | + | chr7.3:71183922-71183941 | None:intergenic | 25.0% |
| !! | TTTTCCTAGAAGTTAATCTT+TGG | - | chr7.3:71184018-71184037 | MS.gene77065:CDS | 25.0% |
| !!! | ACTTGCGTTTTAATTTGAAA+AGG | - | chr7.3:71182926-71182945 | MS.gene77065:CDS | 25.0% |
| !!! | TTTTTGAGAACTAGAATGTT+TGG | - | chr7.3:71183432-71183451 | MS.gene77065:intron | 25.0% |
| AAAGAAAGAATCATGAGCTT+CGG | + | chr7.3:71184256-71184275 | None:intergenic | 30.0% | |
| AAAGCCAAAGATTAACTTCT+AGG | + | chr7.3:71184025-71184044 | None:intergenic | 30.0% | |
| AACTATAGTCCAAATCATCA+AGG | - | chr7.3:71184636-71184655 | MS.gene77065:intron | 30.0% | |
| AAGAGAGAAATTCATCAACA+TGG | + | chr7.3:71184819-71184838 | None:intergenic | 30.0% | |
| AGAGAGAAATTCATCAACAT+GGG | + | chr7.3:71184818-71184837 | None:intergenic | 30.0% | |
| AGTATGAATGTTTAGTGGAA+GGG | - | chr7.3:71185218-71185237 | MS.gene77065:intron | 30.0% | |
| ATAAAACGACTCTTGGAATA+TGG | + | chr7.3:71183240-71183259 | None:intergenic | 30.0% | |
| CAAAACGGAAAATTTGAATC+CGG | + | chr7.3:71182737-71182756 | None:intergenic | 30.0% | |
| CATCATTAACTGTTCTCAAA+GGG | + | chr7.3:71183708-71183727 | None:intergenic | 30.0% | |
| CCACATTAATCGAGAATATA+AGG | + | chr7.3:71183086-71183105 | None:intergenic | 30.0% | |
| CCTTATATTCTCGATTAATG+TGG | - | chr7.3:71183083-71183102 | MS.gene77065:intron | 30.0% | |
| GGAGTTAAGACCAAAATAAT+AGG | - | chr7.3:71183453-71183472 | MS.gene77065:intron | 30.0% | |
| TAGTATGAATGTTTAGTGGA+AGG | - | chr7.3:71185217-71185236 | MS.gene77065:intron | 30.0% | |
| TCATAGTTGAGTTTCTTAGA+AGG | - | chr7.3:71184561-71184580 | MS.gene77065:intron | 30.0% | |
| TCTCAAAATAAAACGACTCT+TGG | + | chr7.3:71183247-71183266 | None:intergenic | 30.0% | |
| TTTATCCTGTGTTTCTTTGA+AGG | + | chr7.3:71185340-71185359 | None:intergenic | 30.0% | |
| ! | ATTCCAAATCCTTGATGATT+TGG | + | chr7.3:71184648-71184667 | None:intergenic | 30.0% |
| ! | ATTTGGACTATAGTTTTCTC+TGG | + | chr7.3:71184631-71184650 | None:intergenic | 30.0% |
| ! | TCTTTTTGTTGAAGGGTTAT+TGG | + | chr7.3:71184731-71184750 | None:intergenic | 30.0% |
| ! | TTAATTTGAAAAGGTTGCGT+TGG | - | chr7.3:71182935-71182954 | MS.gene77065:CDS | 30.0% |
| AAACTTTATATACCTCCCAG+CGG | - | chr7.3:71183210-71183229 | MS.gene77065:intron | 35.0% | |
| AAAGACAGTCCATTAGTTAG+TGG | - | chr7.3:71184595-71184614 | MS.gene77065:intron | 35.0% | |
| AACAACAACAACAACAACAG+AGG | + | chr7.3:71185092-71185111 | None:intergenic | 35.0% | |
| AAGGATGTAACAAAGGAAGA+AGG | + | chr7.3:71184510-71184529 | None:intergenic | 35.0% | |
| ACGCAAAAAACCTTCTCAAA+AGG | - | chr7.3:71185366-71185385 | MS.gene77065:intron | 35.0% | |
| ACTTGAGGATTTGATACAAG+AGG | - | chr7.3:71182986-71183005 | MS.gene77065:CDS | 35.0% | |
| AGAATAAGGCGTGCTAATTT+GGG | - | chr7.3:71183306-71183325 | MS.gene77065:intron | 35.0% | |
| AGCTCATGATTCTTTCTTTC+AGG | - | chr7.3:71184257-71184276 | MS.gene77065:intron | 35.0% | |
| AGGTAAGCAAGTAGTATAAC+AGG | + | chr7.3:71183755-71183774 | None:intergenic | 35.0% | |
| AGTCCAAATCATCAAGGATT+TGG | - | chr7.3:71184642-71184661 | MS.gene77065:intron | 35.0% | |
| AGTCCAATAGTTAGAGGTAA+AGG | - | chr7.3:71184922-71184941 | MS.gene77065:intron | 35.0% | |
| ATTCTTCCCAGTGTCAATTT+GGG | - | chr7.3:71183564-71183583 | MS.gene77065:intron | 35.0% | |
| ATTTGATACAAGAGGATGGA+AGG | - | chr7.3:71182994-71183013 | MS.gene77065:CDS | 35.0% | |
| CAAAAAACCTTCTCAAAAGG+AGG | - | chr7.3:71185369-71185388 | MS.gene77065:intron | 35.0% | |
| CAATAAGGCTCGGAATATTA+AGG | + | chr7.3:71183149-71183168 | None:intergenic | 35.0% | |
| CCATCATTAACTGTTCTCAA+AGG | + | chr7.3:71183709-71183728 | None:intergenic | 35.0% | |
| CGAATTAGACGAACACAATA+AGG | + | chr7.3:71183164-71183183 | None:intergenic | 35.0% | |
| CTATTGGACTATCTTCCATT+TGG | + | chr7.3:71184912-71184931 | None:intergenic | 35.0% | |
| GAAGATAGTCCAATAGTTAG+AGG | - | chr7.3:71184916-71184935 | MS.gene77065:intron | 35.0% | |
| GGAAGTGGAAAATCAAAATC+CGG | - | chr7.3:71182715-71182734 | MS.gene77065:CDS | 35.0% | |
| GTAACATATTGCTTTGTGCA+GGG | - | chr7.3:71184086-71184105 | MS.gene77065:CDS | 35.0% | |
| GTCCAATAGTTAGAGGTAAA+GGG | - | chr7.3:71184923-71184942 | MS.gene77065:intron | 35.0% | |
| TAGAATAAGGCGTGCTAATT+TGG | - | chr7.3:71183305-71183324 | MS.gene77065:intron | 35.0% | |
| TCATAGTTGAGTTTGTCAGA+AGG | - | chr7.3:71184882-71184901 | MS.gene77065:intron | 35.0% | |
| TGAGTTTGACGAAATCACAA+TGG | - | chr7.3:71183875-71183894 | MS.gene77065:intron | 35.0% | |
| TGTAACATATTGCTTTGTGC+AGG | - | chr7.3:71184085-71184104 | MS.gene77065:CDS | 35.0% | |
| TTAGGTCTTACTCAAACTTC+AGG | - | chr7.3:71183651-71183670 | MS.gene77065:intron | 35.0% | |
| TTCGCTTTACCACTAACTAA+TGG | + | chr7.3:71184607-71184626 | None:intergenic | 35.0% | |
| TTGAAAAACTCGAATGACGT+CGG | + | chr7.3:71185307-71185326 | None:intergenic | 35.0% | |
| TTGGAGCTTCAACAAAATCA+CGG | + | chr7.3:71183903-71183922 | None:intergenic | 35.0% | |
| TTTAGCTAGTACACCCAAAT+TGG | + | chr7.3:71183409-71183428 | None:intergenic | 35.0% | |
| ! | CCTTTGAGAACAGTTAATGA+TGG | - | chr7.3:71183706-71183725 | MS.gene77065:intron | 35.0% |
| ! | CGGATTCAAATTTTCCGTTT+TGG | - | chr7.3:71182735-71182754 | MS.gene77065:CDS | 35.0% |
| ! | GTAGAGATAATATGGGTTGT+TGG | + | chr7.3:71184775-71184794 | None:intergenic | 35.0% |
| ! | TAATATGGGTTGTTGGAATG+TGG | + | chr7.3:71184768-71184787 | None:intergenic | 35.0% |
| !!! | GTCATTCGAGTTTTTCAAGA+AGG | - | chr7.3:71185309-71185328 | MS.gene77065:CDS | 35.0% |
| AACCAATAGTTGTTCCATCC+AGG | + | chr7.3:71183190-71183209 | None:intergenic | 40.0% | |
| ACAAGAGAAGGAACAACTTG+AGG | - | chr7.3:71182971-71182990 | MS.gene77065:CDS | 40.0% | |
| ACGAGAACTTCTTGTCAAAC+AGG | - | chr7.3:71182817-71182836 | MS.gene77065:CDS | 40.0% | |
| ACTTACCGCGAATTCAAACA+TGG | - | chr7.3:71183970-71183989 | MS.gene77065:intron | 40.0% | |
| ATAGCGAAGAAAGGTGAATC+GGG | + | chr7.3:71182785-71182804 | None:intergenic | 40.0% | |
| ATCCTGGATGGAACAACTAT+TGG | - | chr7.3:71183185-71183204 | MS.gene77065:intron | 40.0% | |
| ATCTAGATACTGCTGAAACG+AGG | + | chr7.3:71185438-71185457 | None:intergenic | 40.0% | |
| CACAATCTTCAACAAAGGTG+AGG | + | chr7.3:71183996-71184015 | None:intergenic | 40.0% | |
| CTCCCTTTACCTCTAACTAT+TGG | + | chr7.3:71184928-71184947 | None:intergenic | 40.0% | |
| GAATCGAATCAGAGACCTTA+AGG | + | chr7.3:71183548-71183567 | None:intergenic | 40.0% | |
| GAGGATTTGATACAAGAGGA+TGG | - | chr7.3:71182990-71183009 | MS.gene77065:CDS | 40.0% | |
| GATAGCGAAGAAAGGTGAAT+CGG | + | chr7.3:71182786-71182805 | None:intergenic | 40.0% | |
| GATTCACCTTTCTTCGCTAT+CGG | - | chr7.3:71182785-71182804 | MS.gene77065:CDS | 40.0% | |
| GATTCTTCCCAGTGTCAATT+TGG | - | chr7.3:71183563-71183582 | MS.gene77065:intron | 40.0% | |
| GGTTGGAACTTACGTGAAAT+GGG | + | chr7.3:71182764-71182783 | None:intergenic | 40.0% | |
| GTTTGAATTCGCGGTAAGTT+TGG | + | chr7.3:71183969-71183988 | None:intergenic | 40.0% | |
| TAACCTCGTCTGATGAGAAA+AGG | - | chr7.3:71185057-71185076 | MS.gene77065:intron | 40.0% | |
| TAGACGAACACAATAAGGCT+CGG | + | chr7.3:71183159-71183178 | None:intergenic | 40.0% | |
| TCTCAAAAGGAGGATACTTC+AGG | - | chr7.3:71185379-71185398 | MS.gene77065:intron | 40.0% | |
| TGAAAAACTCGAATGACGTC+GGG | + | chr7.3:71185306-71185325 | None:intergenic | 40.0% | |
| TGACAAGAAGTTCTCGTTCA+AGG | + | chr7.3:71182814-71182833 | None:intergenic | 40.0% | |
| TGTTCGTCTAATTCGAATCC+TGG | - | chr7.3:71183169-71183188 | MS.gene77065:intron | 40.0% | |
| TGTTGGAATGTGGTGTGTTT+GGG | + | chr7.3:71184758-71184777 | None:intergenic | 40.0% | |
| TTGGAATATGCTCCTCCTTA+AGG | - | chr7.3:71183530-71183549 | MS.gene77065:intron | 40.0% | |
| TTGGAATATGGAATTCCGCT+GGG | + | chr7.3:71183228-71183247 | None:intergenic | 40.0% | |
| TTGTCAGAAGGTAGACCAAA+TGG | - | chr7.3:71184894-71184913 | MS.gene77065:intron | 40.0% | |
| TTGTTGGAATGTGGTGTGTT+TGG | + | chr7.3:71184759-71184778 | None:intergenic | 40.0% | |
| ! | CGTGAAATGGGTTTCCAAAA+CGG | + | chr7.3:71182752-71182771 | None:intergenic | 40.0% |
| ! | GGGCGTTTCTTTTTGTTGAA+GGG | + | chr7.3:71184738-71184757 | None:intergenic | 40.0% |
| ! | TACTTCAGGAATGATGGAAG+TGG | - | chr7.3:71185393-71185412 | MS.gene77065:intron | 40.0% |
| ! | TGGGCGTTTCTTTTTGTTGA+AGG | + | chr7.3:71184739-71184758 | None:intergenic | 40.0% |
| ! | TTAAGGAGGAGCATATTCCA+AGG | + | chr7.3:71183531-71183550 | None:intergenic | 40.0% |
| !! | ATGACATGCCTTTGGTGTTA+CGG | + | chr7.3:71185504-71185523 | None:intergenic | 40.0% |
| !! | GAAGTATCCTCCTTTTGAGA+AGG | + | chr7.3:71185379-71185398 | None:intergenic | 40.0% |
| AAAGCTGATAGAGGAAGGAG+TGG | + | chr7.3:71185476-71185495 | None:intergenic | 45.0% | |
| AAGTCTTCTGTCCCATTGCT+GGG | - | chr7.3:71184109-71184128 | MS.gene77065:CDS | 45.0% | |
| ACTCCTTCCTCTATCAGCTT+TGG | - | chr7.3:71185475-71185494 | MS.gene77065:CDS | 45.0% | |
| AGGGACAAATGACATGCCTT+TGG | + | chr7.3:71185512-71185531 | None:intergenic | 45.0% | |
| AGGTTACCGATAGCGAAGAA+AGG | + | chr7.3:71182794-71182813 | None:intergenic | 45.0% | |
| ATAAGGCGTGCTAATTTGGG+TGG | - | chr7.3:71183309-71183328 | MS.gene77065:intron | 45.0% | |
| ATGCTGAGCAAACGTGATGT+GGG | + | chr7.3:71184225-71184244 | None:intergenic | 45.0% | |
| CGTCTAATTCGAATCCTGGA+TGG | - | chr7.3:71183173-71183192 | MS.gene77065:intron | 45.0% | |
| CGTCTGATGAGAAAAGGCTT+TGG | - | chr7.3:71185063-71185082 | MS.gene77065:intron | 45.0% | |
| CTCTGCCTTCAAAGAAACAC+AGG | - | chr7.3:71185332-71185351 | MS.gene77065:CDS | 45.0% | |
| CTTGGAATATGGAATTCCGC+TGG | + | chr7.3:71183229-71183248 | None:intergenic | 45.0% | |
| GAATGTTTAGTGGAAGGGTG+CGG | - | chr7.3:71185223-71185242 | MS.gene77065:intron | 45.0% | |
| GGAAGTGGAAAATGCAGCTA+TGG | - | chr7.3:71185408-71185427 | MS.gene77065:intron | 45.0% | |
| GGAGGATACTTCAGGAATGA+TGG | - | chr7.3:71185387-71185406 | MS.gene77065:intron | 45.0% | |
| GGCTTATTCGACCTCAATCT+CGG | - | chr7.3:71183104-71183123 | MS.gene77065:intron | 45.0% | |
| GGGTTGGAACTTACGTGAAA+TGG | + | chr7.3:71182765-71182784 | None:intergenic | 45.0% | |
| GTCTCAGATTCGATTCTTCC+CGG | - | chr7.3:71183381-71183400 | MS.gene77065:intron | 45.0% | |
| TAAGGCGTGCTAATTTGGGT+GGG | - | chr7.3:71183310-71183329 | MS.gene77065:intron | 45.0% | |
| TAGTACACCCAAATTGGCAC+CGG | + | chr7.3:71183403-71183422 | None:intergenic | 45.0% | |
| TATGCTGAGCAAACGTGATG+TGG | + | chr7.3:71184226-71184245 | None:intergenic | 45.0% | |
| TCGAATCAGAGACCTTAAGG+AGG | + | chr7.3:71183545-71183564 | None:intergenic | 45.0% | |
| TGAGGCCATGTTTGAATTCG+CGG | + | chr7.3:71183978-71183997 | None:intergenic | 45.0% | |
| TTCCCAGTGTCAATTTGGGT+GGG | - | chr7.3:71183568-71183587 | MS.gene77065:intron | 45.0% | |
| TTTCAGGCAAAAGTTGCTCG+TGG | - | chr7.3:71184273-71184292 | MS.gene77065:intron | 45.0% | |
| ! | AAGCCTTTTCTCATCAGACG+AGG | + | chr7.3:71185063-71185082 | None:intergenic | 45.0% |
| ! | ATTCTTCCCGGTGCCAATTT+GGG | - | chr7.3:71183393-71183412 | MS.gene77065:intron | 45.0% |
| ! | GAATCGAATCTGAGACCTTG+AGG | + | chr7.3:71183377-71183396 | None:intergenic | 45.0% |
| !! | GACTCTAGAACACACAGAAC+AGG | + | chr7.3:71184199-71184218 | None:intergenic | 45.0% |
| !! | TGTCTCTAGAACCGAGATTG+AGG | + | chr7.3:71183118-71183137 | None:intergenic | 45.0% |
| AGCCCACCCAAATTGACACT+GGG | + | chr7.3:71183573-71183592 | None:intergenic | 50.0% | |
| AGTACACCCAAATTGGCACC+GGG | + | chr7.3:71183402-71183421 | None:intergenic | 50.0% | |
| AGTTGCTCGTGGCTATGACA+TGG | - | chr7.3:71184284-71184303 | MS.gene77065:intron | 50.0% | |
| CGAAGAAAGGTGAATCGGGT+TGG | + | chr7.3:71182781-71182800 | None:intergenic | 50.0% | |
| CGACCAAAGCTGATAGAGGA+AGG | + | chr7.3:71185481-71185500 | None:intergenic | 50.0% | |
| CGTGCTAATTTGGGTGGGTA+TGG | - | chr7.3:71183315-71183334 | MS.gene77065:intron | 50.0% | |
| CGTGGGAAAGGATCTAACTC+TGG | - | chr7.3:71185544-71185563 | MS.gene77065:CDS | 50.0% | |
| CTTCCCAGTGTCAATTTGGG+TGG | - | chr7.3:71183567-71183586 | MS.gene77065:intron | 50.0% | |
| GAAGTCTTCTGTCCCATTGC+TGG | - | chr7.3:71184108-71184127 | MS.gene77065:CDS | 50.0% | |
| GAATATGGAATTCCGCTGGG+AGG | + | chr7.3:71183225-71183244 | None:intergenic | 50.0% | |
| GCTAATTTGGGTGGGTATGG+TGG | - | chr7.3:71183318-71183337 | MS.gene77065:intron | 50.0% | |
| GGGAGACTAGAGAGAGCTAT+AGG | - | chr7.3:71184943-71184962 | MS.gene77065:intron | 50.0% | |
| TAGCCCACCCAAATTGACAC+TGG | + | chr7.3:71183574-71183593 | None:intergenic | 50.0% | |
| TGCTGAGCAAACGTGATGTG+GGG | + | chr7.3:71184224-71184243 | None:intergenic | 50.0% | |
| TTTGGTCGCCGTAACACCAA+AGG | - | chr7.3:71185493-71185512 | MS.gene77065:CDS | 50.0% | |
| ! | AATCTGAGACCTTGAGGAGG+AGG | + | chr7.3:71183371-71183390 | None:intergenic | 50.0% |
| ! | ATCTGAGACCTTGAGGAGGA+GGG | + | chr7.3:71183370-71183389 | None:intergenic | 50.0% |
| ! | GATTCTTCCCGGTGCCAATT+TGG | - | chr7.3:71183392-71183411 | MS.gene77065:intron | 50.0% |
| ! | TCGAATCTGAGACCTTGAGG+AGG | + | chr7.3:71183374-71183393 | None:intergenic | 50.0% |
| !! | GTGGTGTTGACTCTAGACCT+TGG | - | chr7.3:71183337-71183356 | MS.gene77065:intron | 50.0% |
| ACGGCGACCAAAGCTGATAG+AGG | + | chr7.3:71185485-71185504 | None:intergenic | 55.0% | |
| GAATATGCCCCTCCTCCTCA+AGG | - | chr7.3:71183359-71183378 | MS.gene77065:intron | 55.0% | |
| TTCTGTCCCATTGCTGGGTG+TGG | - | chr7.3:71184114-71184133 | MS.gene77065:CDS | 55.0% | |
| ! | AGGAGGAGGGGCATATTCCA+AGG | + | chr7.3:71183357-71183376 | None:intergenic | 55.0% |
| ! | TCTGAGACCTTGAGGAGGAG+GGG | + | chr7.3:71183369-71183388 | None:intergenic | 55.0% |
| CGAGCTGTTCAGCGTGGGAA+AGG | - | chr7.3:71185532-71185551 | MS.gene77065:CDS | 60.0% | |
| CGTGCTAATTTGGGTGGGCC+TGG | - | chr7.3:71183489-71183508 | MS.gene77065:intron | 60.0% | |
| GCTAATTTGGGTGGGCCTGG+TGG | - | chr7.3:71183492-71183511 | MS.gene77065:intron | 60.0% | |
| GTGGTGTTTGCTCGGGACCT+TGG | - | chr7.3:71183511-71183530 | MS.gene77065:intron | 60.0% | |
| TCCCACGCTGAACAGCTCGA+GGG | + | chr7.3:71185531-71185550 | None:intergenic | 60.0% | |
| TCCCTCGAGCTGTTCAGCGT+GGG | - | chr7.3:71185527-71185546 | MS.gene77065:CDS | 60.0% | |
| TTCCCACGCTGAACAGCTCG+AGG | + | chr7.3:71185532-71185551 | None:intergenic | 60.0% | |
| ! | TGGGCCTGGTGGTGTTTGCT+CGG | - | chr7.3:71183503-71183522 | MS.gene77065:intron | 60.0% |
| ACGCGCTCCACACCCAGCAA+TGG | + | chr7.3:71184124-71184143 | None:intergenic | 65.0% | |
| CGCGCTCCACACCCAGCAAT+GGG | + | chr7.3:71184123-71184142 | None:intergenic | 65.0% | |
| GGTCCCGAGCAAACACCACC+AGG | + | chr7.3:71183510-71183529 | None:intergenic | 65.0% | |
| GTCCCTCGAGCTGTTCAGCG+TGG | - | chr7.3:71185526-71185545 | MS.gene77065:CDS | 65.0% | |
| TGCTGGGTGTGGAGCGCGTT+TGG | - | chr7.3:71184125-71184144 | MS.gene77065:CDS | 65.0% | |
| ! | GGGCCTGGTGGTGTTTGCTC+GGG | - | chr7.3:71183504-71183523 | MS.gene77065:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 71182713 | 71185588 | 71182713 | ID=MS.gene77065 |
| chr7.3 | mRNA | 71182713 | 71185588 | 71182713 | ID=MS.gene77065.t1;Parent=MS.gene77065 |
| chr7.3 | exon | 71185463 | 71185588 | 71185463 | ID=MS.gene77065.t1.exon1;Parent=MS.gene77065.t1 |
| chr7.3 | CDS | 71185463 | 71185588 | 71185463 | ID=cds.MS.gene77065.t1;Parent=MS.gene77065.t1 |
| chr7.3 | exon | 71185286 | 71185353 | 71185286 | ID=MS.gene77065.t1.exon2;Parent=MS.gene77065.t1 |
| chr7.3 | CDS | 71185286 | 71185353 | 71185286 | ID=cds.MS.gene77065.t1;Parent=MS.gene77065.t1 |
| chr7.3 | exon | 71183996 | 71184194 | 71183996 | ID=MS.gene77065.t1.exon3;Parent=MS.gene77065.t1 |
| chr7.3 | CDS | 71183996 | 71184194 | 71183996 | ID=cds.MS.gene77065.t1;Parent=MS.gene77065.t1 |
| chr7.3 | exon | 71182713 | 71183081 | 71182713 | ID=MS.gene77065.t1.exon4;Parent=MS.gene77065.t1 |
| chr7.3 | CDS | 71182713 | 71183081 | 71182713 | ID=cds.MS.gene77065.t1;Parent=MS.gene77065.t1 |
| Gene Sequence |
| Protein sequence |
