Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77245.t1 | XP_003622929.1 | 93.1 | 785 | 51 | 2 | 1 | 783 | 1 | 784 | 0.00E+00 | 1221.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77245.t1 | O48847 | 55.8 | 791 | 330 | 13 | 8 | 783 | 2 | 787 | 1.5e-205 | 717.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77245.t1 | G7L191 | 93.1 | 785 | 51 | 2 | 1 | 783 | 1 | 784 | 0.0e+00 | 1221.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene77245.t1 | TR | LUG |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77245.t1 | MTR_7g058460 | 94.140 | 785 | 43 | 2 | 1 | 783 | 1 | 784 | 0.0 | 1462 |
MS.gene77245.t1 | MTR_7g058440 | 91.592 | 785 | 54 | 3 | 1 | 783 | 1 | 775 | 0.0 | 1387 |
MS.gene77245.t1 | MTR_1g050340 | 61.850 | 789 | 284 | 14 | 8 | 783 | 2 | 786 | 0.0 | 922 |
MS.gene77245.t1 | MTR_1g050340 | 61.772 | 790 | 284 | 15 | 8 | 783 | 2 | 787 | 0.0 | 917 |
MS.gene77245.t1 | MTR_1g011610 | 42.796 | 930 | 340 | 25 | 8 | 783 | 2 | 893 | 0.0 | 595 |
MS.gene77245.t1 | MTR_1g011610 | 42.217 | 938 | 343 | 26 | 8 | 783 | 2 | 902 | 0.0 | 587 |
MS.gene77245.t1 | MTR_3g107910 | 40.897 | 780 | 314 | 24 | 114 | 783 | 155 | 897 | 2.99e-154 | 473 |
MS.gene77245.t1 | MTR_3g107910 | 40.407 | 787 | 315 | 24 | 114 | 783 | 155 | 904 | 9.51e-152 | 466 |
MS.gene77245.t1 | MTR_4g113080 | 32.584 | 801 | 451 | 22 | 18 | 783 | 35 | 781 | 1.27e-120 | 381 |
MS.gene77245.t1 | MTR_2g014020 | 42.655 | 354 | 194 | 6 | 435 | 783 | 175 | 524 | 2.29e-93 | 302 |
MS.gene77245.t1 | MTR_4g088620 | 35.842 | 279 | 176 | 3 | 507 | 783 | 31 | 308 | 1.18e-56 | 196 |
MS.gene77245.t1 | MTR_2g014020 | 42.259 | 239 | 133 | 4 | 435 | 670 | 175 | 411 | 1.19e-55 | 197 |
MS.gene77245.t1 | MTR_4g088640 | 38.889 | 288 | 169 | 5 | 499 | 783 | 100 | 383 | 3.65e-54 | 192 |
MS.gene77245.t1 | MTR_4g088625 | 38.267 | 277 | 162 | 6 | 511 | 783 | 28 | 299 | 1.35e-52 | 185 |
MS.gene77245.t1 | MTR_4g088665 | 35.943 | 281 | 172 | 5 | 509 | 783 | 104 | 382 | 5.72e-51 | 183 |
MS.gene77245.t1 | MTR_4g088635 | 36.713 | 286 | 167 | 6 | 509 | 783 | 101 | 383 | 4.58e-50 | 181 |
MS.gene77245.t1 | MTR_4g088660 | 35.870 | 276 | 174 | 3 | 509 | 783 | 208 | 481 | 3.49e-49 | 181 |
MS.gene77245.t1 | MTR_4g088670 | 36.397 | 272 | 155 | 5 | 511 | 777 | 31 | 289 | 8.60e-47 | 169 |
MS.gene77245.t1 | MTR_4g088675 | 31.535 | 241 | 120 | 6 | 547 | 783 | 21 | 220 | 6.24e-32 | 124 |
MS.gene77245.t1 | MTR_1g072140 | 25.407 | 307 | 171 | 9 | 484 | 782 | 12 | 268 | 5.03e-19 | 89.4 |
MS.gene77245.t1 | MTR_5g022690 | 23.948 | 309 | 204 | 9 | 499 | 782 | 173 | 475 | 8.07e-19 | 90.9 |
MS.gene77245.t1 | MTR_3g045130 | 26.644 | 289 | 164 | 7 | 499 | 782 | 265 | 510 | 9.87e-18 | 87.8 |
MS.gene77245.t1 | MTR_4g119620 | 24.315 | 292 | 165 | 8 | 506 | 782 | 27 | 277 | 2.55e-17 | 84.3 |
MS.gene77245.t1 | MTR_4g119620 | 23.045 | 243 | 175 | 6 | 509 | 741 | 81 | 321 | 1.49e-11 | 67.0 |
MS.gene77245.t1 | MTR_4g095058 | 26.378 | 254 | 166 | 9 | 509 | 747 | 292 | 539 | 8.68e-16 | 81.6 |
MS.gene77245.t1 | MTR_4g095058 | 26.378 | 254 | 166 | 9 | 509 | 747 | 290 | 537 | 1.05e-15 | 81.6 |
MS.gene77245.t1 | MTR_8g038550 | 19.079 | 304 | 235 | 8 | 487 | 782 | 164 | 464 | 6.55e-14 | 76.3 |
MS.gene77245.t1 | MTR_6g004040 | 25.000 | 216 | 156 | 4 | 519 | 730 | 30 | 243 | 1.13e-13 | 75.5 |
MS.gene77245.t1 | MTR_1g090827 | 23.162 | 272 | 173 | 7 | 509 | 747 | 54 | 322 | 1.36e-12 | 72.0 |
MS.gene77245.t1 | MTR_1g044720 | 26.203 | 187 | 132 | 4 | 520 | 701 | 236 | 421 | 1.65e-12 | 71.2 |
MS.gene77245.t1 | MTR_4g071130 | 22.059 | 272 | 176 | 8 | 509 | 747 | 54 | 322 | 3.02e-12 | 70.9 |
MS.gene77245.t1 | MTR_8g092620 | 21.277 | 282 | 211 | 7 | 509 | 783 | 21 | 298 | 7.51e-12 | 67.4 |
MS.gene77245.t1 | MTR_2g102277 | 23.445 | 209 | 154 | 3 | 509 | 711 | 60 | 268 | 8.82e-12 | 69.3 |
MS.gene77245.t1 | MTR_2g102277 | 23.445 | 209 | 154 | 3 | 509 | 711 | 60 | 268 | 1.13e-11 | 68.9 |
MS.gene77245.t1 | MTR_4g011950 | 23.445 | 209 | 154 | 3 | 509 | 711 | 60 | 268 | 1.24e-11 | 68.9 |
MS.gene77245.t1 | MTR_3g106080 | 27.746 | 173 | 119 | 4 | 498 | 666 | 452 | 622 | 1.70e-11 | 68.2 |
MS.gene77245.t1 | MTR_2g012630 | 23.611 | 216 | 159 | 4 | 519 | 730 | 29 | 242 | 2.02e-11 | 68.2 |
MS.gene77245.t1 | MTR_2g012630 | 23.611 | 216 | 159 | 4 | 519 | 730 | 29 | 242 | 2.30e-11 | 68.2 |
MS.gene77245.t1 | MTR_4g105700 | 20.070 | 284 | 208 | 5 | 517 | 782 | 371 | 653 | 4.60e-11 | 67.0 |
MS.gene77245.t1 | MTR_5g016350 | 22.925 | 253 | 176 | 8 | 509 | 747 | 297 | 544 | 5.91e-11 | 66.2 |
MS.gene77245.t1 | MTR_5g016350 | 22.925 | 253 | 176 | 8 | 509 | 747 | 233 | 480 | 6.47e-11 | 66.2 |
MS.gene77245.t1 | MTR_1g097140 | 22.909 | 275 | 198 | 7 | 516 | 782 | 91 | 359 | 8.40e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77245.t1 | AT2G32700 | 59.189 | 789 | 304 | 14 | 8 | 783 | 2 | 785 | 0.0 | 891 |
MS.gene77245.t1 | AT2G32700 | 59.039 | 791 | 304 | 15 | 8 | 783 | 2 | 787 | 0.0 | 885 |
MS.gene77245.t1 | AT2G32700 | 59.039 | 791 | 304 | 15 | 8 | 783 | 2 | 787 | 0.0 | 885 |
MS.gene77245.t1 | AT2G32700 | 59.039 | 791 | 304 | 15 | 8 | 783 | 2 | 787 | 0.0 | 885 |
MS.gene77245.t1 | AT2G32700 | 59.039 | 791 | 304 | 15 | 8 | 783 | 2 | 787 | 0.0 | 885 |
MS.gene77245.t1 | AT2G32700 | 59.039 | 791 | 304 | 15 | 8 | 783 | 2 | 787 | 0.0 | 885 |
MS.gene77245.t1 | AT2G32700 | 57.654 | 810 | 304 | 16 | 8 | 783 | 2 | 806 | 0.0 | 874 |
MS.gene77245.t1 | AT4G32551 | 52.459 | 427 | 186 | 5 | 364 | 783 | 515 | 931 | 1.07e-139 | 436 |
MS.gene77245.t1 | AT4G32551 | 77.011 | 87 | 20 | 0 | 8 | 94 | 2 | 88 | 9.54e-39 | 155 |
MS.gene77245.t1 | AT4G32551 | 38.115 | 244 | 106 | 13 | 113 | 330 | 185 | 409 | 3.41e-18 | 90.1 |
MS.gene77245.t1 | AT4G32551 | 52.459 | 427 | 186 | 5 | 364 | 783 | 553 | 969 | 2.59e-139 | 436 |
MS.gene77245.t1 | AT4G32551 | 77.011 | 87 | 20 | 0 | 8 | 94 | 2 | 88 | 1.15e-38 | 155 |
MS.gene77245.t1 | AT4G32551 | 35.793 | 271 | 113 | 15 | 113 | 330 | 185 | 447 | 1.04e-15 | 82.0 |
MS.gene77245.t1 | AT4G02730 | 24.615 | 325 | 180 | 8 | 466 | 782 | 18 | 285 | 4.54e-21 | 95.9 |
MS.gene77245.t1 | AT2G41500 | 25.267 | 281 | 200 | 7 | 509 | 782 | 258 | 535 | 7.81e-20 | 94.4 |
MS.gene77245.t1 | AT2G41500 | 25.267 | 281 | 200 | 7 | 509 | 782 | 258 | 535 | 7.81e-20 | 94.4 |
MS.gene77245.t1 | AT3G49660 | 26.736 | 288 | 155 | 9 | 509 | 783 | 27 | 271 | 3.30e-19 | 89.7 |
MS.gene77245.t1 | AT5G13480 | 22.222 | 324 | 230 | 10 | 478 | 782 | 84 | 404 | 2.19e-17 | 87.0 |
MS.gene77245.t1 | AT5G13480 | 22.222 | 324 | 230 | 10 | 478 | 782 | 72 | 392 | 2.55e-17 | 87.0 |
MS.gene77245.t1 | AT5G13480 | 22.222 | 324 | 230 | 10 | 478 | 782 | 72 | 392 | 2.89e-17 | 86.7 |
MS.gene77245.t1 | AT5G13480 | 22.222 | 324 | 230 | 10 | 478 | 782 | 95 | 415 | 4.70e-17 | 86.3 |
MS.gene77245.t1 | AT5G25150 | 30.058 | 173 | 115 | 5 | 498 | 666 | 451 | 621 | 2.42e-13 | 74.3 |
MS.gene77245.t1 | AT1G11160 | 22.685 | 216 | 161 | 4 | 519 | 730 | 29 | 242 | 2.71e-13 | 74.3 |
MS.gene77245.t1 | AT5G25150 | 30.058 | 173 | 115 | 5 | 498 | 666 | 451 | 621 | 2.74e-13 | 73.9 |
MS.gene77245.t1 | AT1G11160 | 22.685 | 216 | 161 | 4 | 519 | 730 | 29 | 242 | 3.18e-13 | 74.3 |
MS.gene77245.t1 | AT1G11160 | 22.685 | 216 | 161 | 4 | 519 | 730 | 29 | 242 | 3.91e-13 | 73.9 |
MS.gene77245.t1 | AT2G21390 | 22.088 | 249 | 159 | 7 | 509 | 724 | 54 | 300 | 1.12e-12 | 72.4 |
MS.gene77245.t1 | AT1G62020 | 22.059 | 272 | 176 | 7 | 509 | 747 | 54 | 322 | 1.23e-12 | 72.4 |
MS.gene77245.t1 | AT5G08390 | 24.352 | 193 | 140 | 4 | 519 | 707 | 30 | 220 | 1.62e-12 | 71.6 |
MS.gene77245.t1 | AT2G33340 | 25.391 | 256 | 174 | 8 | 520 | 768 | 236 | 481 | 1.97e-12 | 70.9 |
MS.gene77245.t1 | AT2G33340 | 25.391 | 256 | 174 | 8 | 520 | 768 | 236 | 481 | 1.97e-12 | 70.9 |
MS.gene77245.t1 | AT5G23430 | 24.352 | 193 | 140 | 4 | 519 | 707 | 30 | 220 | 2.49e-12 | 71.2 |
MS.gene77245.t1 | AT5G23430 | 24.352 | 193 | 140 | 4 | 519 | 707 | 30 | 220 | 2.53e-12 | 71.2 |
MS.gene77245.t1 | AT5G23430 | 24.352 | 193 | 140 | 4 | 519 | 707 | 30 | 220 | 2.53e-12 | 71.2 |
MS.gene77245.t1 | AT2G33340 | 25.391 | 256 | 174 | 8 | 520 | 768 | 236 | 481 | 2.79e-12 | 70.5 |
MS.gene77245.t1 | AT5G67320 | 24.281 | 313 | 186 | 9 | 509 | 782 | 268 | 568 | 3.15e-12 | 70.5 |
MS.gene77245.t1 | AT5G16750 | 21.631 | 282 | 202 | 5 | 519 | 782 | 372 | 652 | 3.74e-12 | 70.5 |
MS.gene77245.t1 | AT1G52360 | 23.445 | 209 | 154 | 3 | 509 | 711 | 60 | 268 | 4.21e-12 | 70.5 |
MS.gene77245.t1 | AT1G52360 | 23.445 | 209 | 154 | 3 | 509 | 711 | 60 | 268 | 4.21e-12 | 70.5 |
MS.gene77245.t1 | AT1G52360 | 23.445 | 209 | 154 | 3 | 509 | 711 | 60 | 268 | 5.03e-12 | 70.1 |
MS.gene77245.t1 | AT3G15980 | 23.923 | 209 | 153 | 3 | 509 | 711 | 60 | 268 | 5.46e-12 | 70.1 |
MS.gene77245.t1 | AT3G15980 | 23.923 | 209 | 153 | 3 | 509 | 711 | 60 | 268 | 5.91e-12 | 70.1 |
MS.gene77245.t1 | AT3G15980 | 23.923 | 209 | 153 | 3 | 509 | 711 | 60 | 268 | 5.91e-12 | 70.1 |
MS.gene77245.t1 | AT3G15980 | 23.923 | 209 | 153 | 3 | 509 | 711 | 60 | 268 | 5.91e-12 | 70.1 |
MS.gene77245.t1 | AT3G15980 | 23.923 | 209 | 153 | 3 | 509 | 711 | 60 | 268 | 5.91e-12 | 70.1 |
MS.gene77245.t1 | AT3G15980 | 23.923 | 209 | 153 | 3 | 509 | 711 | 60 | 268 | 6.41e-12 | 69.7 |
MS.gene77245.t1 | AT3G15980 | 23.923 | 209 | 153 | 3 | 509 | 711 | 60 | 268 | 6.71e-12 | 69.7 |
MS.gene77245.t1 | AT1G52360 | 23.445 | 209 | 154 | 3 | 509 | 711 | 104 | 312 | 9.28e-12 | 69.3 |
MS.gene77245.t1 | AT1G71840 | 25.000 | 280 | 192 | 11 | 516 | 782 | 81 | 355 | 2.84e-11 | 66.6 |
MS.gene77245.t1 | AT5G43920 | 22.159 | 352 | 229 | 16 | 456 | 782 | 182 | 513 | 6.05e-11 | 66.2 |
MS.gene77245.t1 | AT5G60940 | 23.478 | 230 | 147 | 10 | 543 | 747 | 118 | 343 | 7.35e-11 | 65.5 |
Find 180 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCATATCTTCACCAAATT+TGG | 0.073622 | 7.2:+36968852 | None:intergenic |
ATGGATCCACGTAGACTTTC+TGG | 0.180048 | 7.2:-36972439 | MS.gene77245:CDS |
TTGAGTGGTGGTCCGTCTTT+TGG | 0.188375 | 7.2:-36974428 | MS.gene77245:CDS |
AATGCAAAACCAATATATTT+TGG | 0.201165 | 7.2:-36972536 | MS.gene77245:CDS |
GGCATCTATTAGTCCAAATT+TGG | 0.206338 | 7.2:-36968865 | MS.gene77245:CDS |
AGCCTTGGAAATTCTAATTA+TGG | 0.228558 | 7.2:-36972466 | MS.gene77245:CDS |
CAGTTGGTCCATGGTAATTC+AGG | 0.252220 | 7.2:-36973568 | MS.gene77245:CDS |
AAAGCAAAAGCTTCTTCTTC+TGG | 0.271516 | 7.2:-36971229 | MS.gene77245:CDS |
ATAACTAATTTGTGTTCTTC+AGG | 0.271953 | 7.2:+36969771 | None:intergenic |
GAATCCATGGGAAAATTCTT+TGG | 0.279765 | 7.2:+36973346 | None:intergenic |
TGGGTCAAGCTCAAACTAAC+TGG | 0.285491 | 7.2:-36974941 | MS.gene77245:CDS |
GTTCTCTGGCCTTCGTCTGC+TGG | 0.286432 | 7.2:+36973967 | None:intergenic |
CAAATATTGTTCAACGGTTC+AGG | 0.287072 | 7.2:+36968912 | None:intergenic |
GTTGCCAACTGAGATGAATT+TGG | 0.300359 | 7.2:+36969729 | None:intergenic |
GTCCAAATTTGGTGAAGATA+TGG | 0.313890 | 7.2:-36968854 | MS.gene77245:CDS |
ACATTTCAACTCACAGTTAG+AGG | 0.314147 | 7.2:+36972688 | None:intergenic |
AAATTCTAATTATGGTGATA+TGG | 0.317057 | 7.2:-36972458 | MS.gene77245:CDS |
TGATCAACTAAGACCTGGTT+TGG | 0.320891 | 7.2:-36972587 | MS.gene77245:CDS |
TAGGTGAACCTGATTGCATT+TGG | 0.330287 | 7.2:+36972350 | None:intergenic |
CTATTTGCATCAATAAGATT+TGG | 0.330561 | 7.2:+36973741 | None:intergenic |
CTGCATTTGAAGCTGTTCTC+TGG | 0.336521 | 7.2:+36973953 | None:intergenic |
TCAGGTTGTCCTGTGGAATA+TGG | 0.337781 | 7.2:-36969817 | MS.gene77245:intron |
ATTAGTAGTCGGAGGGATTT+CGG | 0.339596 | 7.2:-36968742 | MS.gene77245:intron |
TCGATTCTACAATCGAAATC+TGG | 0.345323 | 7.2:-36973307 | MS.gene77245:CDS |
TGAGAATGTGATTTCTGCTT+TGG | 0.349362 | 7.2:-36968077 | MS.gene77245:CDS |
TTCATGGCCAATGCACTTGC+TGG | 0.354921 | 7.2:+36973816 | None:intergenic |
CCATGGATTCGTCAGTTTAT+CGG | 0.359532 | 7.2:-36973333 | MS.gene77245:CDS |
CCACCCAGTCCAGGATGATT+AGG | 0.373675 | 7.2:+36973882 | None:intergenic |
AACCGTTGAACAATATTTGC+TGG | 0.378270 | 7.2:-36968908 | MS.gene77245:CDS |
CAGGATGATATAGATCGATT+TGG | 0.381220 | 7.2:-36970721 | MS.gene77245:CDS |
CAACATACCTTCAGAGTTCA+TGG | 0.387665 | 7.2:+36973848 | None:intergenic |
GTGACAAATCTGTGCGGTTA+TGG | 0.388414 | 7.2:-36969698 | MS.gene77245:CDS |
TTGGCTGAGTGTGCTGCTAC+TGG | 0.392095 | 7.2:-36968058 | MS.gene77245:CDS |
GGAGATGCTGGCAATCTCTA+TGG | 0.392177 | 7.2:-36970646 | MS.gene77245:CDS |
CAAAGGATGGTCAATCTAAC+AGG | 0.400484 | 7.2:-36972393 | MS.gene77245:CDS |
AGCCATGTTCCACAGCTCTA+AGG | 0.401681 | 7.2:+36968129 | None:intergenic |
GTCACTATGAAGCCAACTTT+GGG | 0.402140 | 7.2:-36974960 | None:intergenic |
AGGTGAACCTGATTGCATTT+GGG | 0.402536 | 7.2:+36972351 | None:intergenic |
TTCTCTGGCCTTCGTCTGCT+GGG | 0.402566 | 7.2:+36973968 | None:intergenic |
GCTATATTCTTGAACACAAT+AGG | 0.403277 | 7.2:+36969522 | None:intergenic |
CTGCTGAGACAGTGATTGTT+GGG | 0.410030 | 7.2:+36971803 | None:intergenic |
CAGTGCTGGAGAAGACAAAA+AGG | 0.412474 | 7.2:-36970409 | MS.gene77245:intron |
TGTCACTATGAAGCCAACTT+TGG | 0.413489 | 7.2:-36974961 | None:intergenic |
ATGAACTCTGAAGGTATGTT+GGG | 0.414053 | 7.2:-36973846 | MS.gene77245:CDS |
GCTGCTGAGACAGTGATTGT+TGG | 0.416513 | 7.2:+36971802 | None:intergenic |
GTTCAGGAGCTCAACTCTAC+TGG | 0.418673 | 7.2:-36968810 | MS.gene77245:CDS |
CTCGTGTACCCGTGTATCTA+AGG | 0.424307 | 7.2:-36969392 | MS.gene77245:intron |
ATTTCCTCCCAAATGCAATC+AGG | 0.425797 | 7.2:-36972358 | MS.gene77245:CDS |
TGTGTCGATGATGGTGAATT+AGG | 0.429565 | 7.2:+36971163 | None:intergenic |
GCAGAAGCAACTGGAGGACT+TGG | 0.435271 | 7.2:-36971061 | MS.gene77245:CDS |
GACCTCAGGAGAATGCGTTC+AGG | 0.436546 | 7.2:-36968826 | MS.gene77245:CDS |
GTTGTGATGCCAAAATATAT+TGG | 0.439571 | 7.2:+36972527 | None:intergenic |
ACAGGTCTTGGCACAGGCTC+TGG | 0.440258 | 7.2:-36972500 | MS.gene77245:CDS |
TTTGGCATCACAACAACAAC+AGG | 0.440995 | 7.2:-36972518 | MS.gene77245:CDS |
TCCTGCATCATTTGATAGAA+AGG | 0.441149 | 7.2:+36970666 | None:intergenic |
GCGATAGTGAAAATGAAATT+CGG | 0.443112 | 7.2:-36969435 | MS.gene77245:CDS |
GTTTCCAGTACCAGTGCTAT+TGG | 0.448755 | 7.2:+36971201 | None:intergenic |
AATGAAACACCCTCATTCAA+TGG | 0.448834 | 7.2:-36973778 | MS.gene77245:CDS |
ACTAATAAAGTTGCATAGCT+TGG | 0.449679 | 7.2:+36968759 | None:intergenic |
TGTCTTTCAGGATTAAATCA+AGG | 0.450668 | 7.2:-36972739 | MS.gene77245:intron |
TCTTCTTAGGGTGGAAATCA+AGG | 0.451351 | 7.2:+36969476 | None:intergenic |
GGAAAGTTGCTTGCCAGTGC+TGG | 0.454974 | 7.2:-36970423 | MS.gene77245:CDS |
CCGATAAACTGACGAATCCA+TGG | 0.456114 | 7.2:+36973333 | None:intergenic |
GTGGAAATCAAGGGACATAA+TGG | 0.456387 | 7.2:+36969486 | None:intergenic |
TGACAAATCTGTGCGGTTAT+GGG | 0.458834 | 7.2:-36969697 | MS.gene77245:CDS |
CTGGAGGATTTCTCTTTGAG+TGG | 0.460742 | 7.2:-36974443 | MS.gene77245:CDS |
GAGATGAATTTGGTCTAAAA+CGG | 0.460751 | 7.2:+36969739 | None:intergenic |
GCAAGTAACTGTCCCGATCC+AGG | 0.464127 | 7.2:+36969262 | None:intergenic |
GTTAGAGGCCATCCCTTCAA+TGG | 0.469250 | 7.2:+36972703 | None:intergenic |
GATCAACTAAGACCTGGTTT+GGG | 0.472897 | 7.2:-36972586 | MS.gene77245:CDS |
ATGTATGGTGCAGAAGCAAC+TGG | 0.477378 | 7.2:-36971070 | MS.gene77245:CDS |
GTGAGGTTTCAGCCTGGATC+GGG | 0.477744 | 7.2:-36969274 | MS.gene77245:CDS |
GCTGCCAATAGCACTGGTAC+TGG | 0.478935 | 7.2:-36971205 | MS.gene77245:CDS |
TGCGGTATTGCAGCAAATGC+AGG | 0.483221 | 7.2:-36973536 | MS.gene77245:CDS |
TAGACCAAATTCATCTCAGT+TGG | 0.486643 | 7.2:-36969733 | MS.gene77245:CDS |
TCAAATGATGCAGGAGATGC+TGG | 0.486665 | 7.2:-36970658 | MS.gene77245:CDS |
CATGAACTCTGAAGGTATGT+TGG | 0.492726 | 7.2:-36973847 | MS.gene77245:CDS |
GCAGCAGCATCAACTGCAGC+AGG | 0.494418 | 7.2:-36971769 | MS.gene77245:intron |
AGATCCTAATCATCCTGGAC+TGG | 0.494987 | 7.2:-36973886 | MS.gene77245:CDS |
GGTCAATCTAACAGGAATGA+TGG | 0.498321 | 7.2:-36972385 | MS.gene77245:CDS |
TGTCTCAGTCAGTTGGTCCA+TGG | 0.501237 | 7.2:-36973577 | MS.gene77245:intron |
TCTTATTGATGCAAATAGAA+TGG | 0.502350 | 7.2:-36973736 | MS.gene77245:CDS |
GAAATCACATTCTCATGTGC+AGG | 0.506120 | 7.2:+36968085 | None:intergenic |
CGATTCTACAATCGAAATCT+GGG | 0.506221 | 7.2:-36973306 | MS.gene77245:CDS |
GAGGATTTCTCTTTGAGTGG+TGG | 0.509302 | 7.2:-36974440 | MS.gene77245:CDS |
AATATTTGCTGGGATACTAC+TGG | 0.509723 | 7.2:-36968897 | MS.gene77245:CDS |
CTGGCACAACAAAACAGCCT+TGG | 0.512766 | 7.2:-36972481 | MS.gene77245:CDS |
AAATCAGCAACAAGTCATCA+AGG | 0.513351 | 7.2:-36973705 | MS.gene77245:CDS |
AAATCTGGGTTAGGCAGTGC+AGG | 0.515833 | 7.2:-36973292 | MS.gene77245:intron |
TATTCTTGAACACAATAGGT+TGG | 0.516797 | 7.2:+36969526 | None:intergenic |
GGATACTACTGGAGATATGC+TGG | 0.518365 | 7.2:-36968886 | MS.gene77245:CDS |
GCAGCCACCAGCAAGTGCAT+TGG | 0.523196 | 7.2:-36973823 | MS.gene77245:CDS |
CATGGGAAAATTCTTTGGAC+TGG | 0.526682 | 7.2:+36973351 | None:intergenic |
TTCAAAGAACCACCCAGTCC+AGG | 0.526740 | 7.2:+36973873 | None:intergenic |
CACCATAATTAGAATTTCCA+AGG | 0.530895 | 7.2:+36972464 | None:intergenic |
AGTTACAAGTCTTCCATTGA+AGG | 0.531861 | 7.2:-36972716 | MS.gene77245:CDS |
ATCACAACAACAACAGGTCT+TGG | 0.532144 | 7.2:-36972512 | MS.gene77245:CDS |
TCCTTTCTATCAAATGATGC+AGG | 0.532417 | 7.2:-36970667 | MS.gene77245:CDS |
ATGGCCAATGCACTTGCTGG+TGG | 0.533520 | 7.2:+36973819 | None:intergenic |
CAAGTCTTCCATTGAAGGGA+TGG | 0.533713 | 7.2:-36972711 | MS.gene77245:CDS |
GTTTGAGCTTGACCCAAAGT+TGG | 0.537305 | 7.2:+36974948 | None:intergenic |
AGTGAGGTTTCAGCCTGGAT+CGG | 0.538725 | 7.2:-36969275 | MS.gene77245:CDS |
ACCGTTGAACAATATTTGCT+GGG | 0.540385 | 7.2:-36968907 | MS.gene77245:CDS |
CGAAGAGATCCTAATCATCC+TGG | 0.545254 | 7.2:-36973891 | MS.gene77245:CDS |
GATCCTAATCATCCTGGACT+GGG | 0.546709 | 7.2:-36973885 | MS.gene77245:CDS |
ACATCTGAATCCATTGAATG+AGG | 0.547319 | 7.2:+36973768 | None:intergenic |
ATAGATCGATTTGGAGATGT+TGG | 0.547428 | 7.2:-36970712 | MS.gene77245:CDS |
GTCCTTAGAGCTGTGGAACA+TGG | 0.548837 | 7.2:-36968131 | MS.gene77245:CDS |
AACATACCTTCAGAGTTCAT+GGG | 0.549284 | 7.2:+36973849 | None:intergenic |
CAACTTTATTAGTAGTCGGA+GGG | 0.550250 | 7.2:-36968749 | MS.gene77245:CDS |
CAAAAGAGCATGATGATGTA+TGG | 0.551022 | 7.2:-36971085 | MS.gene77245:CDS |
TTCAGGAGCTCAACTCTACT+GGG | 0.552222 | 7.2:-36968809 | MS.gene77245:CDS |
TATGCAACTTTATTAGTAGT+CGG | 0.552448 | 7.2:-36968753 | MS.gene77245:CDS |
TCTGGAGCTGCCAATAGCAC+TGG | 0.557212 | 7.2:-36971211 | MS.gene77245:CDS |
TGAGTGTGCTGCTACTGGAA+TGG | 0.557700 | 7.2:-36968053 | MS.gene77245:CDS |
AAGATATGGAATTTGACCTC+AGG | 0.557728 | 7.2:-36968840 | MS.gene77245:CDS |
CTTTACAGAGTTGTCACGAC+TGG | 0.558560 | 7.2:+36968021 | None:intergenic |
CCAGGTGTGTGTGTCGATGA+TGG | 0.560213 | 7.2:+36971154 | None:intergenic |
AGTTGGTCCATGGTAATTCA+GGG | 0.560693 | 7.2:-36973567 | MS.gene77245:CDS |
CTACAATCGAAATCTGGGTT+AGG | 0.560952 | 7.2:-36973301 | MS.gene77245:CDS |
TTGAACCCCATGAACTCTGA+AGG | 0.565456 | 7.2:-36973855 | MS.gene77245:CDS |
CCATCATCGACACACACACC+TGG | 0.568091 | 7.2:-36971154 | MS.gene77245:CDS |
TGTTGTCATACAGATGAAGA+TGG | 0.570938 | 7.2:-36971832 | MS.gene77245:intron |
AGAGTTGTCACGACTGGCAG+AGG | 0.573691 | 7.2:+36968027 | None:intergenic |
CATCTGAATCCATTGAATGA+GGG | 0.576618 | 7.2:+36973769 | None:intergenic |
GTTACAAGTCTTCCATTGAA+GGG | 0.577894 | 7.2:-36972715 | MS.gene77245:CDS |
TATGCAGCTAAATTCAGCAA+AGG | 0.578065 | 7.2:+36970488 | None:intergenic |
TCGACACACACACCTGGTGA+TGG | 0.580879 | 7.2:-36971148 | MS.gene77245:CDS |
TTGATAGCAATTGATGCACC+TGG | 0.581055 | 7.2:-36974462 | MS.gene77245:intron |
CAGACAAATTTACTCACTCC+AGG | 0.587469 | 7.2:-36969194 | MS.gene77245:intron |
CTTCTTAGGGTGGAAATCAA+GGG | 0.588390 | 7.2:+36969477 | None:intergenic |
TCCCAGCAAATATTGTTCAA+CGG | 0.591234 | 7.2:+36968906 | None:intergenic |
GCAACTTTATTAGTAGTCGG+AGG | 0.592041 | 7.2:-36968750 | MS.gene77245:CDS |
GTGACAACTCTGTAAAGTTG+TGG | 0.593245 | 7.2:-36968015 | MS.gene77245:CDS |
GCAAAAGTGAGGTTTCAGCC+TGG | 0.593703 | 7.2:-36969280 | MS.gene77245:CDS |
GTGTGCAGTCCTTAGAGCTG+TGG | 0.595446 | 7.2:-36968138 | MS.gene77245:intron |
TATTGCAGCAAATGCAGGCA+CGG | 0.597994 | 7.2:-36973531 | MS.gene77245:CDS |
CACTCAAAGAGAAATCCTCC+AGG | 0.599972 | 7.2:+36974444 | None:intergenic |
AATGCAATCAGGTTCACCTA+AGG | 0.600370 | 7.2:-36972347 | MS.gene77245:intron |
ATCAAAGGAGAAGTTAACAT+TGG | 0.600466 | 7.2:-36973376 | MS.gene77245:CDS |
TCGAGGTAGCTTAAACGCAA+AGG | 0.606036 | 7.2:-36972410 | MS.gene77245:CDS |
AGACTTTCTGGTCTTTCTCG+AGG | 0.606690 | 7.2:-36972427 | MS.gene77245:CDS |
CGATAAACTGACGAATCCAT+GGG | 0.609032 | 7.2:+36973334 | None:intergenic |
GATGTATTTAATCCATCACC+AGG | 0.609873 | 7.2:+36971136 | None:intergenic |
GGTAGCTTAAACGCAAAGGA+TGG | 0.610775 | 7.2:-36972406 | MS.gene77245:CDS |
TGAACCTGATTGCATTTGGG+AGG | 0.613490 | 7.2:+36972354 | None:intergenic |
CTTAGATACACGGGTACACG+AGG | 0.614445 | 7.2:+36969393 | None:intergenic |
ACAACAACAGGTCTTGGCAC+AGG | 0.616147 | 7.2:-36972506 | MS.gene77245:CDS |
AGGGAGGGAATGCAAAAGTG+AGG | 0.617434 | 7.2:-36969291 | MS.gene77245:CDS |
AAAGTTTCAACTGATCCAGT+AGG | 0.618148 | 7.2:-36974688 | MS.gene77245:intron |
GCAGAGAGTCCATATTCCAC+AGG | 0.618226 | 7.2:+36969808 | None:intergenic |
TTGACCAACCTTAGATACAC+GGG | 0.620122 | 7.2:+36969384 | None:intergenic |
TGAACTTGTACACCCAAACC+AGG | 0.624306 | 7.2:+36972574 | None:intergenic |
AATCAGCAACAAGTCATCAA+GGG | 0.625746 | 7.2:-36973704 | MS.gene77245:intron |
CTCCTGAACGCATTCTCCTG+AGG | 0.626633 | 7.2:+36968824 | None:intergenic |
TTTGACCAACCTTAGATACA+CGG | 0.626725 | 7.2:+36969383 | None:intergenic |
CCTAATCATCCTGGACTGGG+TGG | 0.629932 | 7.2:-36973882 | MS.gene77245:CDS |
TGGTGCTTTAGATGATAATG+TGG | 0.631026 | 7.2:-36970692 | MS.gene77245:CDS |
GGGTCAAGCTCAAACTAACT+GGG | 0.631489 | 7.2:-36974940 | MS.gene77245:CDS |
ACATATTCCCTGAATTACCA+TGG | 0.638649 | 7.2:+36973560 | None:intergenic |
ACTGGTACTGGAAACACACC+TGG | 0.638798 | 7.2:-36971193 | MS.gene77245:CDS |
AACAAATGAGATGCATTCTG+AGG | 0.639499 | 7.2:-36974388 | MS.gene77245:CDS |
GACGAATATATCCCAAAAGA+CGG | 0.642895 | 7.2:+36974416 | None:intergenic |
GCATGTATCAGGTTGTCCTG+TGG | 0.643655 | 7.2:-36969824 | MS.gene77245:intron |
CCGCACAGATTTGTCACATG+AGG | 0.645521 | 7.2:+36969704 | None:intergenic |
ACATACCTTCAGAGTTCATG+GGG | 0.646193 | 7.2:+36973850 | None:intergenic |
GGAATTGATCAACTAAGACC+TGG | 0.651794 | 7.2:-36972592 | MS.gene77245:CDS |
AATAAAACAAAGCCCAGCTG+AGG | 0.653660 | 7.2:-36970617 | MS.gene77245:CDS |
TGAACTCTGAAGGTATGTTG+GGG | 0.670256 | 7.2:-36973845 | MS.gene77245:CDS |
TCAGTAGACCCAGCAGACGA+AGG | 0.671863 | 7.2:-36973976 | MS.gene77245:intron |
ATAGCAATTGATGCACCTGG+AGG | 0.686315 | 7.2:-36974459 | MS.gene77245:intron |
TATTGTGTTCAAGAATATAG+CGG | 0.694108 | 7.2:-36969520 | MS.gene77245:CDS |
GGCTGCTGCATCTTACATCG+AGG | 0.712980 | 7.2:-36974367 | MS.gene77245:intron |
GGTGAATTAGGTGAAGGACC+AGG | 0.716645 | 7.2:+36971175 | None:intergenic |
TAATTCAGGGAATATGTCTG+CGG | 0.721386 | 7.2:-36973554 | MS.gene77245:CDS |
TATGGTGCAGAAGCAACTGG+AGG | 0.725329 | 7.2:-36971067 | MS.gene77245:CDS |
GATGATGGTGAATTAGGTGA+AGG | 0.730577 | 7.2:+36971169 | None:intergenic |
TGTGGAATATGGACTCTCTG+CGG | 0.738954 | 7.2:-36969806 | MS.gene77245:CDS |
GAAAGACCAGAAAGTCTACG+TGG | 0.762815 | 7.2:+36972433 | None:intergenic |
CCTCATGTGACAAATCTGTG+CGG | 0.774368 | 7.2:-36969704 | MS.gene77245:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 36968009 | 36974976 | 36968009 | ID=MS.gene77245 |
chr7.2 | mRNA | 36968009 | 36974976 | 36968009 | ID=MS.gene77245.t1;Parent=MS.gene77245 |
chr7.2 | exon | 36974927 | 36974976 | 36974927 | ID=MS.gene77245.t1.exon1;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36974927 | 36974976 | 36974927 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36974689 | 36974786 | 36974689 | ID=MS.gene77245.t1.exon2;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36974689 | 36974786 | 36974689 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36974368 | 36974477 | 36974368 | ID=MS.gene77245.t1.exon3;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36974368 | 36974477 | 36974368 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36973705 | 36973991 | 36973705 | ID=MS.gene77245.t1.exon4;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36973705 | 36973991 | 36973705 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36973516 | 36973591 | 36973516 | ID=MS.gene77245.t1.exon5;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36973516 | 36973591 | 36973516 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36973293 | 36973401 | 36973293 | ID=MS.gene77245.t1.exon6;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36973293 | 36973401 | 36973293 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36972702 | 36972751 | 36972702 | ID=MS.gene77245.t1.exon7;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36972702 | 36972751 | 36972702 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36972348 | 36972614 | 36972348 | ID=MS.gene77245.t1.exon8;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36972348 | 36972614 | 36972348 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36971770 | 36971841 | 36971770 | ID=MS.gene77245.t1.exon9;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36971770 | 36971841 | 36971770 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36971042 | 36971257 | 36971042 | ID=MS.gene77245.t1.exon10;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36971042 | 36971257 | 36971042 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36970596 | 36970740 | 36970596 | ID=MS.gene77245.t1.exon11;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36970596 | 36970740 | 36970596 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36970410 | 36970516 | 36970410 | ID=MS.gene77245.t1.exon12;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36970410 | 36970516 | 36970410 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36969686 | 36969835 | 36969686 | ID=MS.gene77245.t1.exon13;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36969686 | 36969835 | 36969686 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36969393 | 36969548 | 36969393 | ID=MS.gene77245.t1.exon14;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36969393 | 36969548 | 36969393 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36969195 | 36969311 | 36969195 | ID=MS.gene77245.t1.exon15;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36969195 | 36969311 | 36969195 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36968743 | 36968940 | 36968743 | ID=MS.gene77245.t1.exon16;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36968743 | 36968940 | 36968743 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
chr7.2 | exon | 36968009 | 36968152 | 36968009 | ID=MS.gene77245.t1.exon17;Parent=MS.gene77245.t1 |
chr7.2 | CDS | 36968009 | 36968152 | 36968009 | ID=cds.MS.gene77245.t1;Parent=MS.gene77245.t1 |
Gene Sequence |
Protein sequence |