Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77355.t1 | XP_013449146.1 | 87.4 | 238 | 30 | 0 | 19 | 256 | 1 | 238 | 6.50E-109 | 403.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77355.t1 | Q9SJW0 | 50.5 | 105 | 48 | 2 | 25 | 128 | 9 | 110 | 3.0e-22 | 107.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77355.t1 | A0A072U1W8 | 87.4 | 238 | 30 | 0 | 19 | 256 | 1 | 238 | 4.7e-109 | 403.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene77355.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77355.t1 | MTR_7g068600 | 93.277 | 238 | 16 | 0 | 19 | 256 | 1 | 238 | 3.54e-167 | 461 |
MS.gene77355.t1 | MTR_7g088070 | 54.545 | 132 | 54 | 2 | 31 | 159 | 50 | 178 | 7.81e-43 | 147 |
MS.gene77355.t1 | MTR_7g088070 | 55.039 | 129 | 54 | 2 | 31 | 159 | 50 | 174 | 2.63e-42 | 145 |
MS.gene77355.t1 | MTR_2g027860 | 49.045 | 157 | 72 | 5 | 31 | 184 | 49 | 200 | 2.68e-42 | 147 |
MS.gene77355.t1 | MTR_1g053835 | 49.296 | 142 | 66 | 4 | 16 | 156 | 242 | 378 | 1.42e-35 | 131 |
MS.gene77355.t1 | MTR_7g098250 | 46.377 | 138 | 71 | 1 | 19 | 156 | 250 | 384 | 4.01e-34 | 128 |
MS.gene77355.t1 | MTR_7g093030 | 47.287 | 129 | 64 | 2 | 31 | 159 | 212 | 336 | 2.19e-33 | 125 |
MS.gene77355.t1 | MTR_1g080330 | 41.714 | 175 | 88 | 6 | 11 | 184 | 161 | 322 | 2.61e-32 | 122 |
MS.gene77355.t1 | MTR_2g086450 | 41.611 | 149 | 64 | 3 | 31 | 159 | 45 | 190 | 1.38e-28 | 112 |
MS.gene77355.t1 | MTR_6g444980 | 42.384 | 151 | 80 | 3 | 11 | 158 | 16 | 162 | 3.38e-28 | 110 |
MS.gene77355.t1 | MTR_6g444980 | 42.105 | 152 | 81 | 3 | 11 | 159 | 16 | 163 | 6.89e-28 | 110 |
MS.gene77355.t1 | MTR_6g032990 | 42.282 | 149 | 67 | 3 | 27 | 159 | 38 | 183 | 8.98e-28 | 110 |
MS.gene77355.t1 | MTR_5g027440 | 41.259 | 143 | 65 | 3 | 31 | 159 | 25 | 162 | 1.31e-27 | 107 |
MS.gene77355.t1 | MTR_7g115530 | 42.636 | 129 | 71 | 1 | 31 | 159 | 218 | 343 | 1.92e-27 | 109 |
MS.gene77355.t1 | MTR_1g080330 | 45.455 | 132 | 61 | 4 | 11 | 141 | 161 | 282 | 7.05e-26 | 102 |
MS.gene77355.t1 | MTR_4g081710 | 38.621 | 145 | 73 | 4 | 27 | 159 | 13 | 153 | 1.58e-25 | 103 |
MS.gene77355.t1 | MTR_5g041350 | 37.415 | 147 | 73 | 4 | 27 | 159 | 11 | 152 | 4.09e-24 | 99.4 |
MS.gene77355.t1 | MTR_1g053800 | 42.384 | 151 | 76 | 4 | 13 | 156 | 152 | 298 | 2.43e-23 | 96.7 |
MS.gene77355.t1 | MTR_2g027800 | 34.302 | 172 | 90 | 4 | 27 | 194 | 35 | 187 | 1.05e-22 | 94.7 |
MS.gene77355.t1 | MTR_2g027800 | 32.222 | 180 | 97 | 3 | 27 | 194 | 35 | 201 | 3.23e-22 | 93.6 |
MS.gene77355.t1 | MTR_7g115530 | 42.857 | 112 | 61 | 1 | 31 | 142 | 218 | 326 | 4.47e-22 | 93.6 |
MS.gene77355.t1 | MTR_7g093030 | 59.459 | 74 | 26 | 2 | 31 | 104 | 212 | 281 | 6.99e-22 | 92.4 |
MS.gene77355.t1 | MTR_1g090670 | 34.615 | 156 | 80 | 3 | 31 | 177 | 44 | 186 | 1.17e-19 | 86.3 |
MS.gene77355.t1 | MTR_7g115530 | 56.923 | 65 | 25 | 1 | 31 | 95 | 218 | 279 | 5.05e-18 | 82.0 |
MS.gene77355.t1 | MTR_7g115530 | 56.923 | 65 | 25 | 1 | 31 | 95 | 218 | 279 | 1.54e-17 | 81.3 |
MS.gene77355.t1 | MTR_1g053830 | 48.101 | 79 | 37 | 2 | 27 | 105 | 14 | 88 | 2.40e-16 | 72.8 |
MS.gene77355.t1 | MTR_7g093010 | 35.570 | 149 | 82 | 4 | 14 | 156 | 196 | 336 | 3.77e-16 | 77.4 |
MS.gene77355.t1 | MTR_3g450310 | 35.484 | 155 | 88 | 6 | 20 | 167 | 5 | 154 | 4.03e-14 | 69.7 |
MS.gene77355.t1 | MTR_7g115530 | 58.182 | 55 | 20 | 1 | 31 | 85 | 218 | 269 | 5.17e-14 | 70.5 |
MS.gene77355.t1 | MTR_7g115530 | 55.357 | 56 | 22 | 1 | 31 | 86 | 218 | 270 | 2.44e-13 | 68.6 |
MS.gene77355.t1 | MTR_2g084230 | 46.512 | 86 | 38 | 2 | 33 | 113 | 99 | 181 | 5.41e-13 | 68.2 |
MS.gene77355.t1 | MTR_2g084230 | 46.512 | 86 | 38 | 2 | 33 | 113 | 99 | 181 | 6.21e-13 | 67.8 |
MS.gene77355.t1 | MTR_2g023580 | 61.818 | 55 | 18 | 1 | 33 | 87 | 57 | 108 | 6.88e-13 | 66.6 |
MS.gene77355.t1 | MTR_8g086410 | 57.627 | 59 | 22 | 1 | 33 | 91 | 113 | 168 | 1.36e-12 | 67.4 |
MS.gene77355.t1 | MTR_8g086410 | 57.627 | 59 | 22 | 1 | 33 | 91 | 111 | 166 | 1.46e-12 | 67.0 |
MS.gene77355.t1 | MTR_7g069660 | 55.000 | 60 | 24 | 1 | 33 | 92 | 73 | 129 | 1.75e-12 | 66.6 |
MS.gene77355.t1 | MTR_2g016220 | 57.627 | 59 | 22 | 1 | 33 | 91 | 91 | 146 | 2.95e-12 | 66.2 |
MS.gene77355.t1 | MTR_2g016220 | 57.627 | 59 | 22 | 1 | 33 | 91 | 91 | 146 | 3.27e-12 | 65.9 |
MS.gene77355.t1 | MTR_6g071625 | 53.448 | 58 | 24 | 1 | 33 | 90 | 204 | 258 | 4.68e-12 | 65.5 |
MS.gene77355.t1 | MTR_8g066310 | 52.542 | 59 | 25 | 1 | 33 | 91 | 175 | 230 | 9.97e-12 | 64.3 |
MS.gene77355.t1 | MTR_1g021520 | 53.448 | 58 | 24 | 1 | 33 | 90 | 128 | 182 | 1.62e-11 | 63.5 |
MS.gene77355.t1 | MTR_3g064840 | 39.773 | 88 | 50 | 1 | 33 | 120 | 276 | 360 | 1.95e-11 | 63.9 |
MS.gene77355.t1 | MTR_5g029470 | 53.448 | 58 | 24 | 1 | 33 | 90 | 221 | 275 | 4.47e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77355.t1 | AT2G01060 | 47.305 | 167 | 82 | 4 | 27 | 190 | 11 | 174 | 2.03e-45 | 154 |
MS.gene77355.t1 | AT5G06800 | 47.020 | 151 | 75 | 3 | 14 | 164 | 176 | 321 | 4.67e-38 | 137 |
MS.gene77355.t1 | AT5G06800 | 45.806 | 155 | 76 | 3 | 14 | 164 | 176 | 326 | 1.25e-37 | 136 |
MS.gene77355.t1 | AT4G28610 | 45.517 | 145 | 65 | 3 | 18 | 156 | 212 | 348 | 2.12e-32 | 122 |
MS.gene77355.t1 | AT5G29000 | 42.857 | 140 | 74 | 3 | 20 | 156 | 177 | 313 | 6.45e-31 | 118 |
MS.gene77355.t1 | AT5G29000 | 42.857 | 140 | 74 | 3 | 20 | 156 | 177 | 313 | 6.45e-31 | 118 |
MS.gene77355.t1 | AT1G79430 | 42.208 | 154 | 70 | 4 | 31 | 179 | 34 | 173 | 6.88e-31 | 117 |
MS.gene77355.t1 | AT5G29000 | 42.857 | 140 | 74 | 3 | 20 | 156 | 220 | 356 | 1.07e-30 | 118 |
MS.gene77355.t1 | AT3G24120 | 38.095 | 168 | 80 | 3 | 31 | 186 | 41 | 196 | 6.27e-30 | 114 |
MS.gene77355.t1 | AT1G69580 | 42.384 | 151 | 65 | 4 | 27 | 159 | 30 | 176 | 1.73e-29 | 113 |
MS.gene77355.t1 | AT1G69580 | 42.105 | 152 | 65 | 4 | 27 | 159 | 30 | 177 | 2.51e-29 | 113 |
MS.gene77355.t1 | AT3G04450 | 32.161 | 199 | 112 | 4 | 4 | 188 | 171 | 360 | 2.99e-29 | 114 |
MS.gene77355.t1 | AT3G04450 | 32.161 | 199 | 112 | 4 | 4 | 188 | 171 | 360 | 2.99e-29 | 114 |
MS.gene77355.t1 | AT3G04450 | 32.161 | 199 | 112 | 4 | 4 | 188 | 211 | 400 | 4.43e-29 | 114 |
MS.gene77355.t1 | AT3G13040 | 43.243 | 148 | 75 | 3 | 18 | 159 | 227 | 371 | 9.62e-29 | 113 |
MS.gene77355.t1 | AT3G13040 | 43.243 | 148 | 75 | 3 | 18 | 159 | 227 | 371 | 9.62e-29 | 113 |
MS.gene77355.t1 | AT3G13040 | 43.243 | 148 | 75 | 3 | 18 | 159 | 227 | 371 | 9.62e-29 | 113 |
MS.gene77355.t1 | AT4G13640 | 38.824 | 170 | 76 | 4 | 31 | 186 | 37 | 192 | 1.17e-28 | 110 |
MS.gene77355.t1 | AT3G04030 | 42.953 | 149 | 65 | 4 | 27 | 159 | 41 | 185 | 3.52e-28 | 111 |
MS.gene77355.t1 | AT5G18240 | 44.828 | 145 | 60 | 5 | 31 | 159 | 45 | 185 | 4.26e-28 | 111 |
MS.gene77355.t1 | AT5G18240 | 44.828 | 145 | 60 | 5 | 31 | 159 | 45 | 185 | 4.26e-28 | 111 |
MS.gene77355.t1 | AT3G24120 | 37.427 | 171 | 80 | 4 | 31 | 186 | 41 | 199 | 6.98e-28 | 108 |
MS.gene77355.t1 | AT2G20400 | 44.094 | 127 | 67 | 2 | 31 | 156 | 231 | 354 | 5.85e-27 | 107 |
MS.gene77355.t1 | AT4G13640 | 38.150 | 173 | 76 | 5 | 31 | 186 | 37 | 195 | 1.07e-26 | 105 |
MS.gene77355.t1 | AT2G01060 | 44.000 | 125 | 67 | 3 | 69 | 190 | 1 | 125 | 1.16e-26 | 103 |
MS.gene77355.t1 | AT2G20400 | 42.063 | 126 | 70 | 1 | 31 | 156 | 231 | 353 | 8.25e-26 | 104 |
MS.gene77355.t1 | AT3G04030 | 42.282 | 149 | 65 | 5 | 27 | 159 | 41 | 184 | 1.29e-25 | 104 |
MS.gene77355.t1 | AT5G18240 | 43.448 | 145 | 60 | 6 | 31 | 159 | 45 | 183 | 6.24e-25 | 102 |
MS.gene77355.t1 | AT5G45580 | 37.500 | 144 | 69 | 3 | 31 | 156 | 7 | 147 | 2.83e-24 | 98.2 |
MS.gene77355.t1 | AT5G45580 | 37.500 | 144 | 69 | 3 | 31 | 156 | 23 | 163 | 3.95e-24 | 98.2 |
MS.gene77355.t1 | AT3G04030 | 40.940 | 149 | 62 | 5 | 27 | 159 | 41 | 179 | 9.64e-24 | 99.0 |
MS.gene77355.t1 | AT5G18240 | 42.282 | 149 | 60 | 6 | 27 | 159 | 41 | 179 | 1.12e-23 | 99.0 |
MS.gene77355.t1 | AT5G18240 | 42.282 | 149 | 60 | 6 | 27 | 159 | 41 | 179 | 1.12e-23 | 99.0 |
MS.gene77355.t1 | AT5G06800 | 56.098 | 82 | 32 | 2 | 14 | 95 | 176 | 253 | 7.93e-23 | 94.7 |
MS.gene77355.t1 | AT3G12730 | 37.037 | 135 | 74 | 3 | 31 | 157 | 23 | 154 | 3.74e-22 | 92.0 |
MS.gene77355.t1 | AT5G29000 | 46.809 | 94 | 47 | 1 | 20 | 113 | 220 | 310 | 1.86e-19 | 86.3 |
MS.gene77355.t1 | AT3G04450 | 42.857 | 91 | 49 | 1 | 4 | 94 | 211 | 298 | 7.29e-19 | 84.3 |
MS.gene77355.t1 | AT1G79430 | 36.975 | 119 | 59 | 3 | 66 | 179 | 1 | 108 | 1.25e-16 | 78.2 |
MS.gene77355.t1 | AT2G42660 | 61.905 | 63 | 21 | 1 | 33 | 95 | 52 | 111 | 1.57e-15 | 74.3 |
MS.gene77355.t1 | AT2G06020 | 50.820 | 61 | 27 | 1 | 31 | 91 | 86 | 143 | 1.91e-15 | 74.7 |
MS.gene77355.t1 | AT2G40260 | 51.190 | 84 | 36 | 3 | 7 | 90 | 60 | 138 | 4.83e-15 | 74.3 |
MS.gene77355.t1 | AT3G04030 | 39.091 | 110 | 50 | 3 | 66 | 159 | 1 | 109 | 4.99e-14 | 70.9 |
MS.gene77355.t1 | AT4G04605 | 51.351 | 74 | 32 | 2 | 33 | 106 | 16 | 85 | 2.58e-13 | 67.8 |
MS.gene77355.t1 | AT5G42630 | 46.154 | 91 | 41 | 3 | 16 | 105 | 94 | 177 | 3.13e-13 | 67.4 |
MS.gene77355.t1 | AT5G42630 | 50.000 | 74 | 33 | 2 | 33 | 105 | 107 | 177 | 4.61e-13 | 67.8 |
MS.gene77355.t1 | AT4G17695 | 38.835 | 103 | 47 | 2 | 33 | 122 | 166 | 265 | 1.03e-11 | 64.3 |
MS.gene77355.t1 | AT5G16560 | 46.575 | 73 | 34 | 2 | 33 | 103 | 221 | 290 | 2.14e-11 | 63.5 |
MS.gene77355.t1 | AT2G38300 | 55.932 | 59 | 23 | 1 | 33 | 91 | 56 | 111 | 2.70e-11 | 63.2 |
MS.gene77355.t1 | AT1G14600 | 55.932 | 59 | 23 | 1 | 33 | 91 | 25 | 80 | 3.33e-11 | 62.4 |
MS.gene77355.t1 | AT2G02060 | 60.000 | 55 | 19 | 1 | 33 | 87 | 31 | 82 | 3.36e-11 | 62.4 |
MS.gene77355.t1 | AT2G02060 | 60.000 | 55 | 19 | 1 | 33 | 87 | 31 | 82 | 3.36e-11 | 62.4 |
MS.gene77355.t1 | AT1G32240 | 53.448 | 58 | 24 | 1 | 33 | 90 | 215 | 269 | 3.70e-11 | 62.8 |
MS.gene77355.t1 | AT1G32240 | 53.448 | 58 | 24 | 1 | 33 | 90 | 215 | 269 | 4.06e-11 | 62.8 |
Find 69 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTTACTTGTGGTGGATTC+TGG | 0.193661 | 7.2:+35225390 | None:intergenic |
GGTGCCTAGTTTCTTATTAT+AGG | 0.220382 | 7.2:-35223913 | None:intergenic |
ACCAAACCTGGAACCTTTCT+TGG | 0.254138 | 7.2:-35223971 | MS.gene77355:CDS |
TACGATATAGAACAGAAATT+TGG | 0.266828 | 7.2:+35225239 | None:intergenic |
GGTGGATTCTGGAATCAATT+TGG | 0.287077 | 7.2:+35225401 | None:intergenic |
CGATGTTCACCAAGGTAAAT+TGG | 0.300095 | 7.2:+35227606 | None:intergenic |
TGGAGGCTGTAAATAGGCTT+GGG | 0.332347 | 7.2:-35227381 | MS.gene77355:CDS |
TCTTTGTGGAGGCTGTAAAT+AGG | 0.333114 | 7.2:-35227387 | MS.gene77355:CDS |
TCCAAGAAAGGTTCCAGGTT+TGG | 0.364366 | 7.2:+35223970 | None:intergenic |
GCACCTCAGCCTGCATTTGA+AGG | 0.377972 | 7.2:+35225117 | None:intergenic |
TTGGATATGTTCAGAAATAC+AGG | 0.386624 | 7.2:-35225428 | MS.gene77355:intron |
GACCCCAAGAGTTCAGTTAT+GGG | 0.387702 | 7.2:-35227478 | MS.gene77355:CDS |
ACACGTCAAAAGCCACTTGC+AGG | 0.391889 | 7.2:-35226279 | MS.gene77355:intron |
AGACCCCAAGAGTTCAGTTA+TGG | 0.391899 | 7.2:-35227479 | MS.gene77355:CDS |
CTGACTCCAAGAAAGGTTCC+AGG | 0.394362 | 7.2:+35223965 | None:intergenic |
GTGGAGGCTGTAAATAGGCT+TGG | 0.397815 | 7.2:-35227382 | MS.gene77355:CDS |
AAGAAAAGCTTGCAAGCCTT+TGG | 0.401704 | 7.2:-35224156 | MS.gene77355:CDS |
GGAAAGTTCCTAGACAGAAT+TGG | 0.410201 | 7.2:-35224206 | MS.gene77355:CDS |
TGCTGTTTGATGTTCTTCCT+CGG | 0.424128 | 7.2:+35224073 | None:intergenic |
GGAACCCATAACTGAACTCT+TGG | 0.435757 | 7.2:+35227474 | None:intergenic |
ATTCCTTTCAGTATACCTCT+TGG | 0.449845 | 7.2:+35226335 | None:intergenic |
CAGAATTTAGCAACCAAACC+TGG | 0.466659 | 7.2:-35223983 | MS.gene77355:CDS |
AACTAGGCACCAAAGGTGAT+TGG | 0.478600 | 7.2:+35223925 | None:intergenic |
CAGCCTCCACAAAGAGATCA+TGG | 0.480797 | 7.2:+35227395 | None:intergenic |
GTTGCTAAATTCTGAGGTAG+TGG | 0.484925 | 7.2:+35223992 | None:intergenic |
AGCAACCTACCAATCACCTT+TGG | 0.500347 | 7.2:-35223934 | MS.gene77355:CDS |
GAACCCATAACTGAACTCTT+GGG | 0.503172 | 7.2:+35227475 | None:intergenic |
ACAACTCCATGATCTCTTTG+TGG | 0.503279 | 7.2:-35227401 | MS.gene77355:CDS |
ACTGAAAGGAATGAAGGCTA+TGG | 0.503485 | 7.2:-35226324 | MS.gene77355:CDS |
CAGCTAGCTGACTCCAAGAA+AGG | 0.506696 | 7.2:+35223958 | None:intergenic |
TACTTTGTCCAATTCTGTCT+AGG | 0.509481 | 7.2:+35224198 | None:intergenic |
CTGAAAGGAATGAAGGCTAT+GGG | 0.510802 | 7.2:-35226323 | MS.gene77355:CDS |
CACACAAAGAACGCTTAAGA+TGG | 0.520735 | 7.2:-35227429 | MS.gene77355:CDS |
TCAAACAGCAAGAAAGCAAA+AGG | 0.520861 | 7.2:-35224060 | MS.gene77355:CDS |
AAAAGAAGTCCTTCAAATGC+AGG | 0.534364 | 7.2:-35225126 | MS.gene77355:CDS |
ATGGGTTCCACTCGCTCAGA+TGG | 0.537642 | 7.2:-35227460 | MS.gene77355:CDS |
AGGTATACTGAAAGGAATGA+AGG | 0.543020 | 7.2:-35226330 | MS.gene77355:CDS |
CTAATGAAGCCAATTTACCT+TGG | 0.546782 | 7.2:-35227615 | MS.gene77355:CDS |
TTCAGATTCCTCAGTAAGAG+AGG | 0.547975 | 7.2:+35224112 | None:intergenic |
AAAGCTTGCAAGCCTTTGGT+TGG | 0.548496 | 7.2:-35224152 | MS.gene77355:CDS |
GAGGCTGTAAATAGGCTTGG+GGG | 0.562654 | 7.2:-35227379 | MS.gene77355:CDS |
AATAAGAAACTAGGCACCAA+AGG | 0.567599 | 7.2:+35223918 | None:intergenic |
GATTATTTATGAAGGAGGAA+AGG | 0.568981 | 7.2:-35225291 | MS.gene77355:intron |
GGAGGCTGTAAATAGGCTTG+GGG | 0.579180 | 7.2:-35227380 | MS.gene77355:CDS |
AAAACCTATAATAAGAAACT+AGG | 0.579659 | 7.2:+35223909 | None:intergenic |
TCTTAAGCGTTCTTTGTGTG+TGG | 0.591577 | 7.2:+35227432 | None:intergenic |
GGTGTTGCTTTACCAACCAA+AGG | 0.599644 | 7.2:+35224140 | None:intergenic |
AGTCCTTCAAATGCAGGCTG+AGG | 0.600265 | 7.2:-35225120 | MS.gene77355:CDS |
GGTTTGGTTGCTAAATTCTG+AGG | 0.605059 | 7.2:+35223986 | None:intergenic |
ACCTCTTCCCTCTCTTACTG+AGG | 0.608111 | 7.2:-35224120 | MS.gene77355:CDS |
GATCCTAGTTCAAAACCTGT+AGG | 0.608319 | 7.2:+35224017 | None:intergenic |
ATCCTTTAAAACACAATCCG+AGG | 0.610019 | 7.2:-35224090 | MS.gene77355:CDS |
GGCAGAGCCATCTGAGCGAG+TGG | 0.612768 | 7.2:+35227453 | None:intergenic |
AGGCACCAAAGGTGATTGGT+AGG | 0.616341 | 7.2:+35223929 | None:intergenic |
ACGCATGAGTGATAAAGTTG+AGG | 0.616870 | 7.2:-35225090 | MS.gene77355:intron |
TCCTCAGTAAGAGAGGGAAG+AGG | 0.625723 | 7.2:+35224119 | None:intergenic |
TCAGATTCCTCAGTAAGAGA+GGG | 0.627051 | 7.2:+35224113 | None:intergenic |
ACACCAAGAGGTATACTGAA+AGG | 0.630195 | 7.2:-35226338 | MS.gene77355:CDS |
TGAAAGGAATGAAGGCTATG+GGG | 0.636336 | 7.2:-35226322 | MS.gene77355:CDS |
GAAAGGAATGAAGGCTATGG+GGG | 0.636670 | 7.2:-35226321 | MS.gene77355:CDS |
AACCCATAACTGAACTCTTG+GGG | 0.651760 | 7.2:+35227476 | None:intergenic |
ACTCCATGATCTCTTTGTGG+AGG | 0.654213 | 7.2:-35227398 | MS.gene77355:CDS |
CTTGGTGAACATCGCCACGA+TGG | 0.654876 | 7.2:-35227597 | MS.gene77355:intron |
TTGTCAGGGGCAACACCAAG+AGG | 0.658933 | 7.2:-35226350 | MS.gene77355:intron |
GGTGGAGAAGAACCTGCAAG+TGG | 0.679561 | 7.2:+35226267 | None:intergenic |
AGGCTGAAAATTGAAGCACA+AGG | 0.685954 | 7.2:-35224227 | MS.gene77355:CDS |
AGGCTGTAAATAGGCTTGGG+GGG | 0.689265 | 7.2:-35227378 | MS.gene77355:CDS |
CATCGTGGCGATGTTCACCA+AGG | 0.700205 | 7.2:+35227598 | None:intergenic |
AGACATAGAATTAACCATCG+TGG | 0.739062 | 7.2:+35227583 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATATAT+AGG | - | chr7.2:35226699-35226718 | MS.gene77355:intron | 0.0% |
!! | ATATATATATATATATATAT+GGG | + | chr7.2:35226718-35226699 | None:intergenic | 0.0% |
!! | TATATATATATATATATATA+GGG | - | chr7.2:35226700-35226719 | MS.gene77355:intron | 0.0% |
!! | TATATATATATATATATATA+TGG | + | chr7.2:35226719-35226700 | None:intergenic | 0.0% |
!!! | AAACAATATAATTATTTCTA+TGG | - | chr7.2:35227180-35227199 | MS.gene77355:intron | 10.0% |
!!! | ATATAGTCTTTATAATTTTT+AGG | - | chr7.2:35227120-35227139 | MS.gene77355:intron | 10.0% |
!!! | ATTTTTAAATAAAAAAGAGA+AGG | + | chr7.2:35225002-35225021 | None:intergenic | 10.0% |
!!! | TTTTTAAATTATTAGTTCAA+AGG | - | chr7.2:35224385-35224404 | MS.gene77355:intron | 10.0% |
!! | AAATACTTTAATGTAGTTTA+TGG | + | chr7.2:35225956-35225975 | None:intergenic | 15.0% |
!! | AATATGCTAATTAGTAAAAA+TGG | - | chr7.2:35225771-35225790 | MS.gene77355:intron | 15.0% |
!! | CTCAAAAAAAAAAAAAATCT+CGG | - | chr7.2:35225841-35225860 | MS.gene77355:intron | 15.0% |
!! | TCAAAAAAAAAAAAAATCTC+GGG | - | chr7.2:35225842-35225861 | MS.gene77355:intron | 15.0% |
!! | TTTAATCAAATACTATTACT+TGG | + | chr7.2:35226172-35226191 | None:intergenic | 15.0% |
!! | TTTGTAATTCATATAAATGT+GGG | + | chr7.2:35225752-35225771 | None:intergenic | 15.0% |
!!! | ATTTTAGTAACCAATTTTTT+GGG | - | chr7.2:35224016-35224035 | MS.gene77355:CDS | 15.0% |
!!! | CAAAATTTTGTATTATTTGT+TGG | - | chr7.2:35227258-35227277 | MS.gene77355:intron | 15.0% |
!!! | TATGATATTTTAATTTGTCA+AGG | - | chr7.2:35226616-35226635 | MS.gene77355:intron | 15.0% |
!!! | TTTTGTAATTCATATAAATG+TGG | + | chr7.2:35225753-35225772 | None:intergenic | 15.0% |
!! | AAAATTGGTTACTAAAATGA+AGG | + | chr7.2:35224014-35224033 | None:intergenic | 20.0% |
!! | AATTTGAATATTGTTTGTCA+GGG | - | chr7.2:35225162-35225181 | MS.gene77355:intron | 20.0% |
!! | ACAAAAAATTACACTAATAG+AGG | + | chr7.2:35224648-35224667 | None:intergenic | 20.0% |
!! | AGAAAGAAAAGAAAAAAAAC+AGG | + | chr7.2:35224865-35224884 | None:intergenic | 20.0% |
!! | CAAATTCAAATGGTTTAAAA+TGG | - | chr7.2:35224317-35224336 | MS.gene77355:intron | 20.0% |
!! | GAAAGAAAAGAAAAAAAACA+GGG | + | chr7.2:35224864-35224883 | None:intergenic | 20.0% |
!! | TAATATTTAGTTAGAGTTGT+AGG | - | chr7.2:35225093-35225112 | MS.gene77355:CDS | 20.0% |
!! | TTTAAATAAAAAAGAGAAGG+AGG | + | chr7.2:35224999-35225018 | None:intergenic | 20.0% |
!! | TTTATAGTATTTGAACCTAT+AGG | - | chr7.2:35226462-35226481 | MS.gene77355:intron | 20.0% |
!!! | AAGAAATTTTCATATTTGGA+AGG | - | chr7.2:35224564-35224583 | MS.gene77355:intron | 20.0% |
!!! | AATTTTACGACCAATATAAA+TGG | + | chr7.2:35225284-35225303 | None:intergenic | 20.0% |
!!! | ACTTGTATTTCAATTTTCAA+GGG | + | chr7.2:35226047-35226066 | None:intergenic | 20.0% |
!!! | AGAATTGTAGAAAGTTTTAA+AGG | - | chr7.2:35227146-35227165 | MS.gene77355:intron | 20.0% |
!!! | ATTTTACGACCAATATAAAT+GGG | + | chr7.2:35225283-35225302 | None:intergenic | 20.0% |
!!! | ATTTTAGACAACTTTTATGT+GGG | - | chr7.2:35225566-35225585 | MS.gene77355:intron | 20.0% |
!!! | ATTTTGTATTATTTGTTGGA+AGG | - | chr7.2:35227262-35227281 | MS.gene77355:intron | 20.0% |
!!! | CATTTTAAACCATTTGAATT+TGG | + | chr7.2:35224319-35224338 | None:intergenic | 20.0% |
!!! | CATTTTAGTAACCAATTTTT+TGG | - | chr7.2:35224015-35224034 | MS.gene77355:CDS | 20.0% |
!!! | GAATTGTAGAAAGTTTTAAA+GGG | - | chr7.2:35227147-35227166 | MS.gene77355:intron | 20.0% |
!!! | GTCTAAGAAATTTTCATATT+TGG | - | chr7.2:35224560-35224579 | MS.gene77355:intron | 20.0% |
!!! | TACTTGTATTTCAATTTTCA+AGG | + | chr7.2:35226048-35226067 | None:intergenic | 20.0% |
!!! | TATTTTAGACAACTTTTATG+TGG | - | chr7.2:35225565-35225584 | MS.gene77355:intron | 20.0% |
!!! | TGATGGATAAAATGTTATTT+TGG | - | chr7.2:35225542-35225561 | MS.gene77355:intron | 20.0% |
!!! | TTATCTTATACGATTTTTGA+TGG | - | chr7.2:35225525-35225544 | MS.gene77355:intron | 20.0% |
! | AAAAAAAAAAAATCTCGGGT+TGG | - | chr7.2:35225846-35225865 | MS.gene77355:intron | 25.0% |
! | ACAACACATGAAAAATTTGT+TGG | - | chr7.2:35225489-35225508 | MS.gene77355:intron | 25.0% |
! | AGTCGTGAATGAATTATTTA+CGG | - | chr7.2:35224259-35224278 | MS.gene77355:intron | 25.0% |
! | ATTTGAATATTGTTTGTCAG+GGG | - | chr7.2:35225163-35225182 | MS.gene77355:intron | 25.0% |
! | CAATTTGAATATTGTTTGTC+AGG | - | chr7.2:35225161-35225180 | MS.gene77355:intron | 25.0% |
! | CTTATTTGAATTGAGATAGA+TGG | - | chr7.2:35224602-35224621 | MS.gene77355:intron | 25.0% |
! | GATTGTTGAATAAGATTTGA+TGG | - | chr7.2:35224718-35224737 | MS.gene77355:intron | 25.0% |
! | GCAAGTAAATAACTAAAAAG+TGG | - | chr7.2:35226831-35226850 | MS.gene77355:intron | 25.0% |
! | GTAAATGTAGAAGACATATT+TGG | + | chr7.2:35226675-35226694 | None:intergenic | 25.0% |
! | GTTATAATTTCACTTGAAGT+TGG | + | chr7.2:35226206-35226225 | None:intergenic | 25.0% |
! | TACGATATAGAACAGAAATT+TGG | + | chr7.2:35226290-35226309 | None:intergenic | 25.0% |
! | TGTTCCATGATTATTTATGA+AGG | - | chr7.2:35226227-35226246 | MS.gene77355:intron | 25.0% |
! | TTCAAAGGAAATATGTCAAA+TGG | - | chr7.2:35224400-35224419 | MS.gene77355:intron | 25.0% |
! | TTGCTTTATATAAGTCAATG+TGG | + | chr7.2:35226012-35226031 | None:intergenic | 25.0% |
! | TTTATATAAGTCAATGTGGA+TGG | + | chr7.2:35226008-35226027 | None:intergenic | 25.0% |
!! | CAAGTATTTAGAGTAGTTTA+TGG | - | chr7.2:35225353-35225372 | MS.gene77355:intron | 25.0% |
!! | GGATTTGTAAAACTGTTTTA+GGG | + | chr7.2:35225670-35225689 | None:intergenic | 25.0% |
!! | TGGATTTGTAAAACTGTTTT+AGG | + | chr7.2:35225671-35225690 | None:intergenic | 25.0% |
!! | TTTTTCTTAAGTCAAGTCAA+AGG | + | chr7.2:35224908-35224927 | None:intergenic | 25.0% |
!!! | CAATTTTCAAGGGAATTATT+AGG | + | chr7.2:35226037-35226056 | None:intergenic | 25.0% |
!!! | GTTTGGTTTGCTAAAAAATA+AGG | + | chr7.2:35225726-35225745 | None:intergenic | 25.0% |
!!! | TTGTCATCAATTTTGATTGT+TGG | + | chr7.2:35224811-35224830 | None:intergenic | 25.0% |
AAAATGGTTGAACTATGATC+CGG | - | chr7.2:35224333-35224352 | MS.gene77355:intron | 30.0% | |
AATGACTAATATGCTCATCT+TGG | - | chr7.2:35226079-35226098 | MS.gene77355:intron | 30.0% | |
ACCTTCTAACAAAAACAAGT+GGG | - | chr7.2:35226889-35226908 | MS.gene77355:intron | 30.0% | |
CTAAACCAAAAACTTACTTG+TGG | + | chr7.2:35226149-35226168 | None:intergenic | 30.0% | |
CTTTAATGACTACATCCTAT+AGG | + | chr7.2:35226480-35226499 | None:intergenic | 30.0% | |
GATTATTTATGAAGGAGGAA+AGG | - | chr7.2:35226235-35226254 | MS.gene77355:intron | 30.0% | |
TACACTAATAGAGGTTTATG+TGG | + | chr7.2:35224639-35224658 | None:intergenic | 30.0% | |
TATTTAGTTAGAGTTGTAGG+AGG | - | chr7.2:35225096-35225115 | MS.gene77355:CDS | 30.0% | |
TCCATGATTATTTATGAAGG+AGG | - | chr7.2:35226230-35226249 | MS.gene77355:intron | 30.0% | |
TCCTCCTTCATAAATAATCA+TGG | + | chr7.2:35226234-35226253 | None:intergenic | 30.0% | |
TGATGTAATGACTTACTATC+TGG | + | chr7.2:35224174-35224193 | None:intergenic | 30.0% | |
TGGTTATGTCCAAATTCAAA+TGG | - | chr7.2:35224307-35224326 | MS.gene77355:intron | 30.0% | |
TTATAGCAACATACACCTTA+GGG | + | chr7.2:35226866-35226885 | None:intergenic | 30.0% | |
TTATTTGAACAGTTTGATCG+TGG | - | chr7.2:35224287-35224306 | MS.gene77355:intron | 30.0% | |
TTGGATATGTTCAGAAATAC+AGG | - | chr7.2:35226098-35226117 | MS.gene77355:intron | 30.0% | |
!! | TACCAAAGGGTACTAAAAAA+GGG | - | chr7.2:35224433-35224452 | MS.gene77355:intron | 30.0% |
!!! | ATTTTAAAGTAGAGTTGTCG+AGG | + | chr7.2:35224756-35224775 | None:intergenic | 30.0% |
!!! | GTTTTAGGGATATGAAAAAC+TGG | + | chr7.2:35225656-35225675 | None:intergenic | 30.0% |
AAAAGAAGTCCTTCAAATGC+AGG | - | chr7.2:35226400-35226419 | MS.gene77355:intron | 35.0% | |
AAACCAAGCTCTTTGATACT+TGG | - | chr7.2:35224932-35224951 | MS.gene77355:intron | 35.0% | |
AACCAAAAACTTACTTGTGG+TGG | + | chr7.2:35226146-35226165 | None:intergenic | 35.0% | |
AAGTGGTTAAATACACCCTA+AGG | - | chr7.2:35226848-35226867 | MS.gene77355:intron | 35.0% | |
AAGTGGTTAATTACACCCTA+AGG | - | chr7.2:35226997-35227016 | MS.gene77355:intron | 35.0% | |
AATAAGAAACTAGGCACCAA+AGG | + | chr7.2:35227611-35227630 | None:intergenic | 35.0% | |
ACTCCCACATAAAAACTAGT+GGG | + | chr7.2:35226805-35226824 | None:intergenic | 35.0% | |
ACTCCCACATAAAAATCAGT+GGG | + | chr7.2:35226954-35226973 | None:intergenic | 35.0% | |
AGACAAAACAGAACAACACA+AGG | - | chr7.2:35225462-35225481 | MS.gene77355:intron | 35.0% | |
AGACATAGAATTAACCATCG+TGG | + | chr7.2:35223946-35223965 | None:intergenic | 35.0% | |
AGGTATACTGAAAGGAATGA+AGG | - | chr7.2:35225196-35225215 | MS.gene77355:intron | 35.0% | |
ATTCCTTTCAGTATACCTCT+TGG | + | chr7.2:35225194-35225213 | None:intergenic | 35.0% | |
CAAGAAAAACTCCAGTTGTA+CGG | + | chr7.2:35225697-35225716 | None:intergenic | 35.0% | |
CACCTTCTAACAAAAACAAG+TGG | - | chr7.2:35226888-35226907 | MS.gene77355:intron | 35.0% | |
GAACATGTATAACTTCCAAG+AGG | - | chr7.2:35227204-35227223 | MS.gene77355:intron | 35.0% | |
GTTATAGCAACATACACCTT+AGG | + | chr7.2:35226867-35226886 | None:intergenic | 35.0% | |
TAACATGTTGAGTCGTGAAT+TGG | - | chr7.2:35224220-35224239 | MS.gene77355:CDS | 35.0% | |
TAATTCATTCACGACTCAAC+TGG | + | chr7.2:35224255-35224274 | None:intergenic | 35.0% | |
TACTTTGTCCAATTCTGTCT+AGG | + | chr7.2:35227331-35227350 | None:intergenic | 35.0% | |
TCAAACAGCAAGAAAGCAAA+AGG | - | chr7.2:35227466-35227485 | MS.gene77355:CDS | 35.0% | |
TCTTCTCCACCCATTTATAT+TGG | - | chr7.2:35225271-35225290 | MS.gene77355:CDS | 35.0% | |
TGACAACGTAAATGCATGAT+TGG | - | chr7.2:35224825-35224844 | MS.gene77355:intron | 35.0% | |
TGTGTTCTAGCAAATCCTAT+AGG | - | chr7.2:35226912-35226931 | MS.gene77355:intron | 35.0% | |
TTACGACCAATATAAATGGG+TGG | + | chr7.2:35225280-35225299 | None:intergenic | 35.0% | |
TTAGGGATATGAAAAACTGG+TGG | + | chr7.2:35225653-35225672 | None:intergenic | 35.0% | |
TTTAGCAAAGCTACACCTTA+GGG | + | chr7.2:35227015-35227034 | None:intergenic | 35.0% | |
! | ATCCACCACAAGTAAGTTTT+TGG | - | chr7.2:35226141-35226160 | MS.gene77355:intron | 35.0% |
! | GATGAGAATGTTTTTCCTAC+AGG | - | chr7.2:35227494-35227513 | MS.gene77355:intron | 35.0% |
! | TTTTAGCAAAGCTACACCTT+AGG | + | chr7.2:35227016-35227035 | None:intergenic | 35.0% |
!! | ATCCTTTAAAACACAATCCG+AGG | - | chr7.2:35227436-35227455 | MS.gene77355:CDS | 35.0% |
!! | CTACCAAAGGGTACTAAAAA+AGG | - | chr7.2:35224432-35224451 | MS.gene77355:intron | 35.0% |
!! | TTCCTCGGATTGTGTTTTAA+AGG | + | chr7.2:35227441-35227460 | None:intergenic | 35.0% |
!! | TTTTAGTACCCTTTGGTAGT+AGG | + | chr7.2:35224431-35224450 | None:intergenic | 35.0% |
!!! | AACCCTTTTTTAGTACCCTT+TGG | + | chr7.2:35224438-35224457 | None:intergenic | 35.0% |
!!! | ACACCCACTAGTTTTTATGT+GGG | - | chr7.2:35226799-35226818 | MS.gene77355:intron | 35.0% |
!!! | ACACCCACTGATTTTTATGT+GGG | - | chr7.2:35226948-35226967 | MS.gene77355:intron | 35.0% |
!!! | ACCCACTTGTTTTTGTTAGA+AGG | + | chr7.2:35226893-35226912 | None:intergenic | 35.0% |
!!! | TTTCCTACAGGTTTTGAACT+AGG | - | chr7.2:35227506-35227525 | MS.gene77355:intron | 35.0% |
AACCCATAACTGAACTCTTG+GGG | + | chr7.2:35224053-35224072 | None:intergenic | 40.0% | |
AAGAAAAGCTTGCAAGCCTT+TGG | - | chr7.2:35227370-35227389 | MS.gene77355:intron | 40.0% | |
ACAACTCCATGATCTCTTTG+TGG | - | chr7.2:35224125-35224144 | MS.gene77355:CDS | 40.0% | |
ACGCATGAGTGATAAAGTTG+AGG | - | chr7.2:35226436-35226455 | MS.gene77355:intron | 40.0% | |
ACTCCCACATAAAAACCAGT+GGG | - | chr7.2:35227037-35227056 | MS.gene77355:intron | 40.0% | |
ACTGAAAGGAATGAAGGCTA+TGG | - | chr7.2:35225202-35225221 | MS.gene77355:intron | 40.0% | |
AGGCTGAAAATTGAAGCACA+AGG | - | chr7.2:35227299-35227318 | MS.gene77355:intron | 40.0% | |
AGTCCAAGTATCAAAGAGCT+TGG | + | chr7.2:35224938-35224957 | None:intergenic | 40.0% | |
ATCCGCAAAACAGTAAGTAC+TGG | - | chr7.2:35225426-35225445 | MS.gene77355:intron | 40.0% | |
ATGGTCAATCCTACTACCAA+AGG | - | chr7.2:35224419-35224438 | MS.gene77355:intron | 40.0% | |
ATGTGGGACAAAAAGTTGTG+TGG | - | chr7.2:35225582-35225601 | MS.gene77355:intron | 40.0% | |
ATGTTGAGTCGTGAATTGGA+TGG | - | chr7.2:35224224-35224243 | MS.gene77355:CDS | 40.0% | |
CAAAAAGTTGTGTGGTGGTT+TGG | - | chr7.2:35225590-35225609 | MS.gene77355:intron | 40.0% | |
CACACAAAGAACGCTTAAGA+TGG | - | chr7.2:35224097-35224116 | MS.gene77355:CDS | 40.0% | |
CACTCCCACATAAAAACTAG+TGG | + | chr7.2:35226806-35226825 | None:intergenic | 40.0% | |
CACTCCCACATAAAAATCAG+TGG | + | chr7.2:35226955-35226974 | None:intergenic | 40.0% | |
CAGAATTTAGCAACCAAACC+TGG | - | chr7.2:35227543-35227562 | MS.gene77355:intron | 40.0% | |
CATATAAATGTGGGTGCGTT+TGG | + | chr7.2:35225743-35225762 | None:intergenic | 40.0% | |
CCAAGAGGAAAAAACAGACA+TGG | - | chr7.2:35227219-35227238 | MS.gene77355:intron | 40.0% | |
CGATGTTCACCAAGGTAAAT+TGG | + | chr7.2:35223923-35223942 | None:intergenic | 40.0% | |
CTGAAAGAGGCCCAAAAAAT+TGG | + | chr7.2:35224029-35224048 | None:intergenic | 40.0% | |
CTGAAAGGAATGAAGGCTAT+GGG | - | chr7.2:35225203-35225222 | MS.gene77355:intron | 40.0% | |
GAACCCATAACTGAACTCTT+GGG | + | chr7.2:35224054-35224073 | None:intergenic | 40.0% | |
GATCCTAGTTCAAAACCTGT+AGG | + | chr7.2:35227512-35227531 | None:intergenic | 40.0% | |
GGAAAGTTCCTAGACAGAAT+TGG | - | chr7.2:35227320-35227339 | MS.gene77355:intron | 40.0% | |
GGAAGGTTCAAAAAAGCTTG+AGG | - | chr7.2:35227279-35227298 | MS.gene77355:intron | 40.0% | |
GTGTTCTAGCAAATGCCTAT+AGG | + | chr7.2:35226930-35226949 | None:intergenic | 40.0% | |
TCAGATTCCTCAGTAAGAGA+GGG | + | chr7.2:35227416-35227435 | None:intergenic | 40.0% | |
TCTTAAGCGTTCTTTGTGTG+TGG | + | chr7.2:35224097-35224116 | None:intergenic | 40.0% | |
TCTTTGTGGAGGCTGTAAAT+AGG | - | chr7.2:35224139-35224158 | MS.gene77355:CDS | 40.0% | |
TGAAAGGAATGAAGGCTATG+GGG | - | chr7.2:35225204-35225223 | MS.gene77355:intron | 40.0% | |
TGGTCAATCCTACTACCAAA+GGG | - | chr7.2:35224420-35224439 | MS.gene77355:intron | 40.0% | |
TTCAGATTCCTCAGTAAGAG+AGG | + | chr7.2:35227417-35227436 | None:intergenic | 40.0% | |
! | ACACCAAGAGGTATACTGAA+AGG | - | chr7.2:35225188-35225207 | MS.gene77355:intron | 40.0% |
! | GGTTTGGTTGCTAAATTCTG+AGG | + | chr7.2:35227543-35227562 | None:intergenic | 40.0% |
! | GTCCAGTACTTACTGTTTTG+CGG | + | chr7.2:35225431-35225450 | None:intergenic | 40.0% |
! | TGCTGTTTGATGTTCTTCCT+CGG | + | chr7.2:35227456-35227475 | None:intergenic | 40.0% |
!! | AACTTACTTGTGGTGGATTC+TGG | + | chr7.2:35226139-35226158 | None:intergenic | 40.0% |
!! | GGTGGATTCTGGAATCAATT+TGG | + | chr7.2:35226128-35226147 | None:intergenic | 40.0% |
!! | GTTGCTAAATTCTGAGGTAG+TGG | + | chr7.2:35227537-35227556 | None:intergenic | 40.0% |
!!! | ACACCCACTGGTTTTTATGT+GGG | + | chr7.2:35227043-35227062 | None:intergenic | 40.0% |
!!! | CACACCCACTAGTTTTTATG+TGG | - | chr7.2:35226798-35226817 | MS.gene77355:intron | 40.0% |
!!! | CACACCCACTGATTTTTATG+TGG | - | chr7.2:35226947-35226966 | MS.gene77355:intron | 40.0% |
!!! | CCATGTCTGTTTTTTCCTCT+TGG | + | chr7.2:35227222-35227241 | None:intergenic | 40.0% |
AAACTCCAGTTGTACGGTGT+TGG | + | chr7.2:35225691-35225710 | None:intergenic | 45.0% | |
AAAGCTTGCAAGCCTTTGGT+TGG | - | chr7.2:35227374-35227393 | MS.gene77355:CDS | 45.0% | |
AACTAGGCACCAAAGGTGAT+TGG | + | chr7.2:35227604-35227623 | None:intergenic | 45.0% | |
ACCAAACCTGGAACCTTTCT+TGG | - | chr7.2:35227555-35227574 | MS.gene77355:intron | 45.0% | |
ACTCCATGATCTCTTTGTGG+AGG | - | chr7.2:35224128-35224147 | MS.gene77355:CDS | 45.0% | |
AGACCCCAAGAGTTCAGTTA+TGG | - | chr7.2:35224047-35224066 | MS.gene77355:CDS | 45.0% | |
AGCAACCTACCAATCACCTT+TGG | - | chr7.2:35227592-35227611 | MS.gene77355:intron | 45.0% | |
CAAATCCAACACCGTACAAC+TGG | - | chr7.2:35225683-35225702 | MS.gene77355:intron | 45.0% | |
CACTCCCACATAAAAACCAG+TGG | - | chr7.2:35227036-35227055 | MS.gene77355:intron | 45.0% | |
CATTGAGCCTACAAGACATC+CGG | + | chr7.2:35224355-35224374 | None:intergenic | 45.0% | |
CTATGATCCGGATGTCTTGT+AGG | - | chr7.2:35224345-35224364 | MS.gene77355:intron | 45.0% | |
GAAAGGAATGAAGGCTATGG+GGG | - | chr7.2:35225205-35225224 | MS.gene77355:intron | 45.0% | |
GACCCCAAGAGTTCAGTTAT+GGG | - | chr7.2:35224048-35224067 | MS.gene77355:CDS | 45.0% | |
GGAACCCATAACTGAACTCT+TGG | + | chr7.2:35224055-35224074 | None:intergenic | 45.0% | |
TCCAAGAAAGGTTCCAGGTT+TGG | + | chr7.2:35227559-35227578 | None:intergenic | 45.0% | |
TGGAGGCTGTAAATAGGCTT+GGG | - | chr7.2:35224145-35224164 | MS.gene77355:CDS | 45.0% | |
TGGGACAAAAAGTTGTGTGG+TGG | - | chr7.2:35225585-35225604 | MS.gene77355:intron | 45.0% | |
TGTCTTGTAGGCTCAATGTC+TGG | - | chr7.2:35224357-35224376 | MS.gene77355:intron | 45.0% | |
!! | GGTGTTGCTTTACCAACCAA+AGG | + | chr7.2:35227389-35227408 | None:intergenic | 45.0% |
!!! | CACACCCACTGGTTTTTATG+TGG | + | chr7.2:35227044-35227063 | None:intergenic | 45.0% |
!! | ATATATATATATATATATAG+GGG | - | chr7.2:35226765-35226784 | MS.gene77355:intron | 5.0% |
!! | TATATATATATATATATATG+GGG | + | chr7.2:35227077-35227096 | None:intergenic | 5.0% |
ACACGTCAAAAGCCACTTGC+AGG | - | chr7.2:35225247-35225266 | MS.gene77355:CDS | 50.0% | |
ACCTCTTCCCTCTCTTACTG+AGG | - | chr7.2:35227406-35227425 | MS.gene77355:CDS | 50.0% | |
AGGCACCAAAGGTGATTGGT+AGG | + | chr7.2:35227600-35227619 | None:intergenic | 50.0% | |
AGGCTGTAAATAGGCTTGGG+GGG | - | chr7.2:35224148-35224167 | MS.gene77355:CDS | 50.0% | |
AGTCCTTCAAATGCAGGCTG+AGG | - | chr7.2:35226406-35226425 | MS.gene77355:intron | 50.0% | |
CAGCCTCCACAAAGAGATCA+TGG | + | chr7.2:35224134-35224153 | None:intergenic | 50.0% | |
CTGACTCCAAGAAAGGTTCC+AGG | + | chr7.2:35227564-35227583 | None:intergenic | 50.0% | |
GAACTCTTGGGGTCTGAAAG+AGG | + | chr7.2:35224042-35224061 | None:intergenic | 50.0% | |
GAGGCTGTAAATAGGCTTGG+GGG | - | chr7.2:35224147-35224166 | MS.gene77355:CDS | 50.0% | |
GGAGGCTGTAAATAGGCTTG+GGG | - | chr7.2:35224146-35224165 | MS.gene77355:CDS | 50.0% | |
GTGGAGGCTGTAAATAGGCT+TGG | - | chr7.2:35224144-35224163 | MS.gene77355:CDS | 50.0% | |
TCCTCAGTAAGAGAGGGAAG+AGG | + | chr7.2:35227410-35227429 | None:intergenic | 50.0% | |
! | CAGCTAGCTGACTCCAAGAA+AGG | + | chr7.2:35227571-35227590 | None:intergenic | 50.0% |
! | GTTTGCTAGAACACACCCAC+TGG | + | chr7.2:35226806-35226787 | None:intergenic | 50.0% |
!! | AGTTGTGTGGTGGTTTGGTG+AGG | - | chr7.2:35225595-35225614 | MS.gene77355:intron | 50.0% |
!! | GTTGTGTGGTGGTTTGGTGA+GGG | - | chr7.2:35225596-35225615 | MS.gene77355:intron | 50.0% |
ATGGGTTCCACTCGCTCAGA+TGG | - | chr7.2:35224066-35224085 | MS.gene77355:CDS | 55.0% | |
CATCGTGGCGATGTTCACCA+AGG | + | chr7.2:35223931-35223950 | None:intergenic | 55.0% | |
CTTGGTGAACATCGCCACGA+TGG | - | chr7.2:35223929-35223948 | MS.gene77355:CDS | 55.0% | |
GCACCTCAGCCTGCATTTGA+AGG | + | chr7.2:35226412-35226431 | None:intergenic | 55.0% | |
GGTGGAGAAGAACCTGCAAG+TGG | + | chr7.2:35225262-35225281 | None:intergenic | 55.0% | |
TTGTCAGGGGCAACACCAAG+AGG | - | chr7.2:35225176-35225195 | MS.gene77355:intron | 55.0% | |
GGCAGAGCCATCTGAGCGAG+TGG | + | chr7.2:35224076-35224095 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 35223914 | 35227634 | 35223914 | ID=MS.gene77355 |
chr7.2 | mRNA | 35223914 | 35227634 | 35223914 | ID=MS.gene77355.t1;Parent=MS.gene77355 |
chr7.2 | exon | 35227598 | 35227634 | 35227598 | ID=MS.gene77355.t1.exon1;Parent=MS.gene77355.t1 |
chr7.2 | CDS | 35227598 | 35227634 | 35227598 | ID=cds.MS.gene77355.t1;Parent=MS.gene77355.t1 |
chr7.2 | exon | 35227371 | 35227499 | 35227371 | ID=MS.gene77355.t1.exon2;Parent=MS.gene77355.t1 |
chr7.2 | CDS | 35227371 | 35227499 | 35227371 | ID=cds.MS.gene77355.t1;Parent=MS.gene77355.t1 |
chr7.2 | exon | 35226280 | 35226365 | 35226280 | ID=MS.gene77355.t1.exon3;Parent=MS.gene77355.t1 |
chr7.2 | CDS | 35226280 | 35226365 | 35226280 | ID=cds.MS.gene77355.t1;Parent=MS.gene77355.t1 |
chr7.2 | exon | 35225397 | 35225436 | 35225397 | ID=MS.gene77355.t1.exon4;Parent=MS.gene77355.t1 |
chr7.2 | CDS | 35225397 | 35225436 | 35225397 | ID=cds.MS.gene77355.t1;Parent=MS.gene77355.t1 |
chr7.2 | exon | 35225242 | 35225299 | 35225242 | ID=MS.gene77355.t1.exon5;Parent=MS.gene77355.t1 |
chr7.2 | CDS | 35225242 | 35225299 | 35225242 | ID=cds.MS.gene77355.t1;Parent=MS.gene77355.t1 |
chr7.2 | exon | 35225091 | 35225160 | 35225091 | ID=MS.gene77355.t1.exon6;Parent=MS.gene77355.t1 |
chr7.2 | CDS | 35225091 | 35225160 | 35225091 | ID=cds.MS.gene77355.t1;Parent=MS.gene77355.t1 |
chr7.2 | exon | 35223914 | 35224264 | 35223914 | ID=MS.gene77355.t1.exon7;Parent=MS.gene77355.t1 |
chr7.2 | CDS | 35223914 | 35224264 | 35223914 | ID=cds.MS.gene77355.t1;Parent=MS.gene77355.t1 |
Gene Sequence |
Protein sequence |