AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene77423

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77423.t1 MTR_5g040420 93.017 401 17 2 1 400 1 391 0.0 749
MS.gene77423.t1 MTR_8g467490 63.256 430 93 15 1 400 1 395 3.55e-174 491
MS.gene77423.t1 MTR_6g011860 47.113 433 154 17 1 400 1 391 6.76e-116 343
MS.gene77423.t1 MTR_5g090970 53.390 236 96 5 6 234 10 238 7.99e-79 246
MS.gene77423.t1 MTR_5g090970 52.966 236 96 6 6 234 10 237 1.92e-76 239
MS.gene77423.t1 MTR_2g068880 57.547 212 74 6 6 203 16 225 6.69e-76 238
MS.gene77423.t1 MTR_2g068920 61.453 179 55 4 11 179 18 192 2.49e-73 231
MS.gene77423.t1 MTR_4g089135 50.838 179 71 2 14 176 15 192 1.87e-61 202
MS.gene77423.t1 MTR_2g080010 52.381 168 67 2 16 175 17 179 1.73e-60 199
MS.gene77423.t1 MTR_4g134460 54.938 162 62 3 12 173 52 202 1.12e-59 200
MS.gene77423.t1 MTR_2g093810 51.744 172 79 2 1 172 1 168 6.67e-59 194
MS.gene77423.t1 MTR_7g085220 46.445 211 93 4 16 219 10 207 9.56e-59 195
MS.gene77423.t1 MTR_3g088110 48.705 193 79 4 16 200 9 189 1.78e-58 192
MS.gene77423.t1 MTR_5g041940 39.695 262 140 8 16 269 5 256 7.81e-58 190
MS.gene77423.t1 MTR_2157s0010 45.588 204 104 4 16 215 10 210 8.94e-58 190
MS.gene77423.t1 MTR_8g094580 53.503 157 66 2 16 172 9 158 4.13e-56 186
MS.gene77423.t1 MTR_2g079990 53.039 181 74 5 16 196 18 187 4.32e-56 188
MS.gene77423.t1 MTR_4g081870 43.210 243 113 7 16 249 11 237 5.53e-55 183
MS.gene77423.t1 MTR_7g100990 53.125 160 71 2 16 175 13 168 7.62e-55 184
MS.gene77423.t1 MTR_4g036030 48.256 172 74 3 14 182 7 166 1.27e-53 181
MS.gene77423.t1 MTR_3g096920 52.229 157 67 2 16 172 9 157 1.44e-53 180
MS.gene77423.t1 MTR_8g059170 53.614 166 68 4 16 181 16 172 1.61e-53 181
MS.gene77423.t1 MTR_2g079990 48.259 201 81 4 16 196 18 215 1.74e-53 182
MS.gene77423.t1 MTR_8g076110 43.299 194 95 3 10 200 2 183 4.26e-53 179
MS.gene77423.t1 MTR_5g021710 45.161 186 85 5 8 188 2 175 3.67e-52 178
MS.gene77423.t1 MTR_5g012080 47.126 174 79 3 14 184 7 170 4.24e-52 177
MS.gene77423.t1 MTR_3g435150 50.549 182 80 4 8 189 10 181 9.82e-52 175
MS.gene77423.t1 MTR_4g108760 49.153 177 76 4 8 182 13 177 1.05e-51 177
MS.gene77423.t1 MTR_2g064090 51.250 160 67 4 16 173 8 158 3.12e-51 175
MS.gene77423.t1 MTR_4g101680 47.337 169 74 3 14 179 7 163 3.20e-51 176
MS.gene77423.t1 MTR_3g096920 58.140 129 51 1 16 144 9 134 9.36e-51 174
MS.gene77423.t1 MTR_6g012670 53.797 158 65 3 16 173 22 171 3.53e-50 172
MS.gene77423.t1 MTR_4g075980 46.552 174 76 3 11 180 12 172 2.05e-49 169
MS.gene77423.t1 MTR_2g078700 48.485 165 79 2 11 175 20 178 3.86e-49 171
MS.gene77423.t1 MTR_6g477900 42.857 189 95 4 16 202 8 185 4.90e-49 166
MS.gene77423.t1 MTR_4g035590 49.390 164 67 3 14 174 8 158 1.61e-48 168
MS.gene77423.t1 MTR_6g032770 46.667 180 84 4 9 184 11 182 2.00e-48 169
MS.gene77423.t1 MTR_7g085260 46.703 182 85 4 5 182 8 181 2.14e-48 169
MS.gene77423.t1 MTR_3g064580 43.915 189 92 6 16 202 8 184 4.15e-48 174
MS.gene77423.t1 MTR_6g084430 45.562 169 80 3 10 178 1 157 6.01e-48 166
MS.gene77423.t1 MTR_3g109340 47.159 176 78 3 1 175 12 173 1.33e-47 166
MS.gene77423.t1 MTR_1g096430 39.013 223 105 6 10 227 3 199 1.43e-47 166
MS.gene77423.t1 MTR_3g109340 48.000 175 79 3 1 175 12 174 1.52e-47 166
MS.gene77423.t1 MTR_7g005280 48.603 179 78 3 1 178 1 166 1.94e-47 162
MS.gene77423.t1 MTR_2g062730 41.799 189 94 4 13 196 9 186 1.50e-46 163
MS.gene77423.t1 MTR_5g076850 46.250 160 74 3 16 173 8 157 2.87e-46 168
MS.gene77423.t1 MTR_5g014300 48.193 166 64 5 16 172 8 160 3.48e-46 162
MS.gene77423.t1 MTR_4g098630 36.755 302 165 10 16 308 8 292 7.73e-46 160
MS.gene77423.t1 MTR_1g008740 44.828 174 85 3 1 173 1 164 7.78e-46 161
MS.gene77423.t1 MTR_8g024480 46.429 168 78 4 14 174 15 177 8.93e-46 163
MS.gene77423.t1 MTR_1g008740 44.828 174 85 3 1 173 15 178 1.19e-45 161
MS.gene77423.t1 MTR_5g069030 48.148 162 72 4 17 176 28 179 2.79e-45 165
MS.gene77423.t1 MTR_3g070030 45.783 166 83 3 17 182 22 180 3.20e-45 159
MS.gene77423.t1 MTR_3g093050 42.029 207 99 6 17 219 25 214 6.33e-45 164
MS.gene77423.t1 MTR_3g093050 42.029 207 99 6 17 219 25 214 1.27e-44 163
MS.gene77423.t1 MTR_1g069805 37.156 218 115 4 16 231 12 209 1.55e-44 155
MS.gene77423.t1 MTR_7g011130 48.503 167 73 5 17 174 22 184 3.90e-44 157
MS.gene77423.t1 MTR_3g116070 52.448 143 66 2 3 143 11 153 4.52e-44 157
MS.gene77423.t1 MTR_3g096140 44.172 163 79 4 12 172 5 157 5.99e-44 154
MS.gene77423.t1 MTR_2g064470 45.087 173 84 4 10 182 7 168 9.85e-44 154
MS.gene77423.t1 MTR_7g011120 46.584 161 79 3 17 174 11 167 1.41e-43 154
MS.gene77423.t1 MTR_1g097300 45.963 161 75 3 15 173 20 170 1.52e-43 160
MS.gene77423.t1 MTR_3g096140 44.172 163 79 4 12 172 5 157 2.92e-43 154
MS.gene77423.t1 MTR_8g063550 41.040 173 90 4 14 184 6 168 3.82e-43 154
MS.gene77423.t1 MTR_8g063550 41.040 173 90 4 14 184 6 168 5.96e-43 155
MS.gene77423.t1 MTR_8g063550 44.099 161 78 4 14 172 6 156 5.97e-43 155
MS.gene77423.t1 MTR_3g093040 41.860 172 87 5 10 178 103 264 2.79e-42 150
MS.gene77423.t1 MTR_8g093580 39.306 173 93 3 14 184 6 168 4.11e-41 152
MS.gene77423.t1 MTR_7g097090 41.935 155 78 1 16 170 12 154 5.72e-41 147
MS.gene77423.t1 MTR_1g090723 44.785 163 77 5 16 175 10 162 7.01e-41 153
MS.gene77423.t1 MTR_1g090720 43.860 171 74 4 14 174 42 200 1.96e-40 150
MS.gene77423.t1 MTR_1g090723 44.172 163 77 5 16 175 10 161 3.84e-40 151
MS.gene77423.t1 MTR_1g090723 44.172 163 77 5 16 175 10 161 4.79e-40 150
MS.gene77423.t1 MTR_8g099750 44.805 154 80 2 16 169 16 164 3.05e-39 140
MS.gene77423.t1 MTR_0036s0150 44.785 163 76 6 16 175 7 158 6.80e-39 146
MS.gene77423.t1 MTR_2g086880 40.230 174 82 5 14 182 18 174 1.40e-36 140
MS.gene77423.t1 MTR_2g086880 40.230 174 82 5 14 182 18 174 1.82e-36 140
MS.gene77423.t1 MTR_3g098810 42.515 167 90 3 16 180 16 178 3.73e-36 132
MS.gene77423.t1 MTR_3g070040 41.358 162 86 4 18 179 12 164 4.24e-34 129
MS.gene77423.t1 MTR_3g098810 45.205 146 76 2 1 144 1 144 9.54e-34 124
MS.gene77423.t1 MTR_8g023840 45.865 133 68 3 17 146 14 145 1.25e-33 129
MS.gene77423.t1 MTR_4g052620 44.118 136 70 3 10 140 1 135 2.35e-33 125
MS.gene77423.t1 MTR_3g096140 41.379 145 73 4 30 172 2 136 3.59e-33 127
MS.gene77423.t1 MTR_8g094580 51.351 111 47 2 62 172 1 104 1.55e-32 122
MS.gene77423.t1 MTR_2g086690 46.617 133 60 5 16 140 6 135 1.78e-32 123
MS.gene77423.t1 MTR_7g105170 36.585 164 94 5 16 173 6 165 2.87e-32 122
MS.gene77423.t1 MTR_8g023860 46.269 134 67 4 10 140 9 140 4.28e-32 125
MS.gene77423.t1 MTR_8g023900 33.663 202 117 4 17 215 196 383 1.13e-29 120
MS.gene77423.t1 MTR_8g023900 36.196 163 88 5 15 173 12 162 6.99e-27 112
MS.gene77423.t1 MTR_4g094302 36.943 157 89 2 16 172 13 159 1.72e-29 113
MS.gene77423.t1 MTR_8g023930 33.500 200 115 5 15 210 24 209 1.16e-27 114
MS.gene77423.t1 MTR_4g094302 40.476 126 67 1 16 141 13 130 4.14e-27 105
MS.gene77423.t1 MTR_8g023880 32.258 186 88 8 17 184 10 175 7.61e-20 89.0
MS.gene77423.t1 MTR_8g093790 33.533 167 81 6 16 182 12 148 1.36e-19 86.3
MS.gene77423.t1 MTR_7g070140 46.753 77 41 0 67 143 17 93 1.64e-19 84.7
MS.gene77423.t1 MTR_7g083330 34.058 138 84 5 11 145 14 147 6.61e-18 81.6
MS.gene77423.t1 MTR_7g083360 32.374 139 87 5 12 147 7 141 1.04e-16 77.4
MS.gene77423.t1 MTR_7g083370 31.746 126 78 5 17 139 13 133 6.97e-16 74.7
MS.gene77423.t1 MTR_3g096400 30.247 162 97 6 16 171 9 160 6.51e-15 73.6
MS.gene77423.t1 MTR_1g087190 60.870 46 17 1 16 60 7 52 1.43e-13 65.5
MS.gene77423.t1 MTR_7g070150 41.026 78 35 1 107 184 3 69 3.99e-13 65.1
MS.gene77423.t1 MTR_7g116460 27.907 172 103 7 20 183 11 169 7.46e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77423.t1 AT1G26870 56.442 326 121 7 2 313 3 321 3.60e-112 335
MS.gene77423.t1 AT5G39820 67.839 199 50 3 2 186 8 206 3.49e-98 296
MS.gene77423.t1 AT2G43000 63.793 174 52 3 6 179 10 172 4.61e-76 237
MS.gene77423.t1 AT3G12910 46.094 256 128 5 6 254 13 265 9.35e-67 214
MS.gene77423.t1 AT2G02450 55.625 160 60 3 13 172 50 198 4.62e-60 200
MS.gene77423.t1 AT3G04070 54.217 166 68 3 16 176 12 174 7.32e-59 195
MS.gene77423.t1 AT3G15510 52.695 167 66 2 18 176 21 182 8.74e-59 196
MS.gene77423.t1 AT1G61110 53.179 173 73 3 16 181 18 189 4.09e-57 190
MS.gene77423.t1 AT3G04070 49.451 182 68 3 16 176 12 190 2.02e-56 189
MS.gene77423.t1 AT1G01720 51.497 167 74 2 14 180 7 166 5.50e-56 186
MS.gene77423.t1 AT1G69490 52.174 161 71 3 16 176 11 165 2.17e-55 184
MS.gene77423.t1 AT4G27410 49.724 181 79 4 16 196 16 184 8.35e-55 183
MS.gene77423.t1 AT1G77450 51.829 164 71 2 16 179 12 167 1.12e-54 181
MS.gene77423.t1 AT3G15500 53.939 165 66 4 16 180 16 170 2.39e-54 182
MS.gene77423.t1 AT1G52890 42.918 233 122 5 16 248 16 237 2.60e-54 182
MS.gene77423.t1 AT5G08790 52.727 165 71 3 12 175 4 162 5.21e-54 181
MS.gene77423.t1 AT4G36160 48.876 178 76 4 14 188 10 175 5.73e-54 183
MS.gene77423.t1 AT4G36160 48.876 178 76 4 14 188 10 175 5.73e-54 183
MS.gene77423.t1 AT5G63790 42.922 219 105 5 12 222 47 253 5.78e-54 181
MS.gene77423.t1 AT1G76420 46.809 188 86 2 2 189 15 188 6.53e-54 182
MS.gene77423.t1 AT5G63790 47.120 191 88 4 12 201 57 235 6.81e-54 181
MS.gene77423.t1 AT4G36160 48.876 178 76 4 14 188 14 179 7.17e-54 183
MS.gene77423.t1 AT1G52880 55.952 168 64 3 18 179 21 184 9.45e-54 181
MS.gene77423.t1 AT5G07680 44.934 227 105 6 4 220 9 225 2.47e-53 180
MS.gene77423.t1 AT5G39610 43.162 234 113 5 1 232 9 224 1.85e-52 177
MS.gene77423.t1 AT5G07680 46.047 215 98 5 16 220 5 211 1.97e-52 177
MS.gene77423.t1 AT2G18060 47.191 178 78 5 14 188 9 173 3.56e-52 178
MS.gene77423.t1 AT2G18060 47.191 178 78 5 14 188 9 173 3.56e-52 178
MS.gene77423.t1 AT5G61430 47.514 181 81 4 4 182 8 176 6.69e-52 177
MS.gene77423.t1 AT1G12260 47.929 169 73 3 14 179 7 163 1.82e-51 176
MS.gene77423.t1 AT5G62380 49.398 166 69 4 14 176 7 160 1.84e-51 176
MS.gene77423.t1 AT5G62380 49.398 166 69 4 14 176 7 160 1.84e-51 176
MS.gene77423.t1 AT1G12260 47.929 169 73 3 14 179 7 163 2.05e-51 177
MS.gene77423.t1 AT2G17040 49.711 173 70 4 12 180 4 163 2.21e-51 174
MS.gene77423.t1 AT3G18400 49.708 171 74 4 10 180 1 159 7.14e-51 173
MS.gene77423.t1 AT4G10350 50.000 164 69 3 14 174 9 162 9.81e-51 174
MS.gene77423.t1 AT4G27410 45.455 198 79 5 16 196 16 201 1.51e-50 172
MS.gene77423.t1 AT2G24430 46.199 171 83 1 8 178 10 171 1.65e-50 172
MS.gene77423.t1 AT2G24430 46.199 171 83 1 8 178 10 171 1.65e-50 172
MS.gene77423.t1 AT5G18270 48.837 172 76 4 5 174 13 174 4.15e-50 172
MS.gene77423.t1 AT3G17730 50.311 161 64 4 16 172 8 156 5.63e-50 169
MS.gene77423.t1 AT3G04060 48.851 174 76 4 1 172 9 171 6.28e-50 172
MS.gene77423.t1 AT1G62700 46.784 171 76 3 14 181 7 165 1.02e-49 172
MS.gene77423.t1 AT1G62700 46.784 171 76 3 14 181 7 165 1.02e-49 172
MS.gene77423.t1 AT3G29035 51.111 180 73 6 3 179 15 182 2.22e-49 170
MS.gene77423.t1 AT5G18270 48.256 172 77 4 5 174 13 174 2.55e-49 170
MS.gene77423.t1 AT3G03200 46.067 178 84 5 16 190 8 176 1.36e-48 172
MS.gene77423.t1 AT4G17980 47.170 159 76 2 16 172 8 160 1.77e-48 166
MS.gene77423.t1 AT1G33280 49.390 164 67 3 14 174 8 158 1.89e-48 167
MS.gene77423.t1 AT4G17980 47.170 159 76 2 16 172 8 160 2.03e-48 166
MS.gene77423.t1 AT1G71930 40.367 218 111 7 16 229 11 213 2.76e-48 167
MS.gene77423.t1 AT1G71930 40.367 218 111 7 16 229 11 213 2.76e-48 167
MS.gene77423.t1 AT5G66300 47.977 173 74 5 14 181 12 173 3.37e-48 166
MS.gene77423.t1 AT5G53950 47.953 171 83 1 12 182 15 179 3.73e-48 168
MS.gene77423.t1 AT1G65910 48.125 160 71 3 16 173 8 157 8.21e-48 172
MS.gene77423.t1 AT2G46770 45.614 171 79 4 14 174 16 182 2.31e-47 166
MS.gene77423.t1 AT5G17260 47.500 160 71 4 16 172 8 157 4.91e-47 167
MS.gene77423.t1 AT3G15170 47.929 169 81 3 11 178 16 178 6.32e-47 163
MS.gene77423.t1 AT5G13180 48.750 160 70 2 16 175 16 163 6.76e-47 161
MS.gene77423.t1 AT1G54330 47.590 166 72 4 16 179 8 160 1.20e-45 159
MS.gene77423.t1 AT3G61910 44.022 184 92 6 14 189 11 191 1.36e-45 160
MS.gene77423.t1 AT3G10500 46.951 164 75 4 14 175 9 162 1.72e-45 165
MS.gene77423.t1 AT3G12977 44.633 177 87 4 3 177 5 172 1.79e-45 158
MS.gene77423.t1 AT3G10490 45.833 168 70 4 14 174 27 180 4.15e-45 156
MS.gene77423.t1 AT4G35580 48.734 158 69 4 17 172 12 159 5.96e-45 163
MS.gene77423.t1 AT4G35580 48.734 158 69 4 17 172 12 159 6.05e-45 163
MS.gene77423.t1 AT1G79580 45.732 164 74 3 14 174 17 168 6.05e-45 159
MS.gene77423.t1 AT1G79580 45.732 164 74 3 14 174 17 168 6.05e-45 159
MS.gene77423.t1 AT1G79580 45.732 164 74 3 14 174 17 168 6.05e-45 159
MS.gene77423.t1 AT1G79580 45.732 164 74 3 14 174 17 168 6.05e-45 159
MS.gene77423.t1 AT1G79580 45.732 164 74 3 14 174 17 168 6.05e-45 159
MS.gene77423.t1 AT4G35580 48.734 158 69 4 17 172 12 159 6.29e-45 162
MS.gene77423.t1 AT5G46590 55.469 128 54 2 16 141 8 134 6.35e-45 157
MS.gene77423.t1 AT3G10480 46.061 165 74 4 14 174 27 180 6.98e-45 161
MS.gene77423.t1 AT3G10480 45.029 171 66 4 14 174 27 179 7.68e-45 161
MS.gene77423.t1 AT5G46590 55.469 128 54 2 16 141 8 134 9.31e-45 157
MS.gene77423.t1 AT1G33060 45.399 163 77 3 12 172 22 174 1.01e-44 164
MS.gene77423.t1 AT1G33060 45.399 163 77 3 12 172 22 174 1.07e-44 164
MS.gene77423.t1 AT1G56010 48.750 160 70 5 16 172 21 171 1.62e-44 157
MS.gene77423.t1 AT1G32770 44.828 174 73 5 14 174 16 179 2.01e-44 157
MS.gene77423.t1 AT1G34180 42.703 185 87 4 16 191 18 192 7.42e-44 158
MS.gene77423.t1 AT3G10490 45.833 168 70 4 14 174 27 180 8.95e-44 158
MS.gene77423.t1 AT5G24590 45.402 174 83 4 4 174 2 166 9.71e-44 158
MS.gene77423.t1 AT5G04410 45.732 164 77 3 14 175 9 162 1.21e-43 160
MS.gene77423.t1 AT1G34180 42.703 185 87 4 16 191 18 192 6.15e-43 158
MS.gene77423.t1 AT1G32510 42.442 172 85 3 16 180 8 172 1.78e-42 150
MS.gene77423.t1 AT3G49530 43.671 158 78 3 17 172 16 164 4.28e-42 153
MS.gene77423.t1 AT1G34190 45.679 162 76 3 16 175 18 169 5.06e-42 155
MS.gene77423.t1 AT1G34180 39.801 201 90 4 16 195 18 208 9.95e-42 153
MS.gene77423.t1 AT3G49530 44.099 161 78 4 15 172 13 164 1.11e-41 153
MS.gene77423.t1 AT2G33480 44.944 178 84 5 1 177 1 165 5.24e-41 146
MS.gene77423.t1 AT2G33480 44.944 178 82 5 1 177 1 163 6.20e-41 146
MS.gene77423.t1 AT1G34180 40.102 197 87 4 16 191 18 204 8.19e-41 152
MS.gene77423.t1 AT5G09330 41.615 161 82 3 14 172 6 156 1.29e-40 150
MS.gene77423.t1 AT5G09330 41.615 161 82 3 14 172 6 156 1.29e-40 150
MS.gene77423.t1 AT5G09330 41.615 161 82 3 14 172 6 156 1.29e-40 150
MS.gene77423.t1 AT5G09330 41.615 161 82 3 14 172 6 156 1.29e-40 150
MS.gene77423.t1 AT5G09330 41.615 161 82 3 14 172 6 156 1.29e-40 150
MS.gene77423.t1 AT4G28530 39.888 178 79 3 16 177 12 177 7.23e-40 145
MS.gene77423.t1 AT5G22290 41.520 171 80 5 14 180 21 175 1.12e-38 142
MS.gene77423.t1 AT3G10480 38.889 198 73 5 14 174 27 213 1.13e-38 145
MS.gene77423.t1 AT5G64060 33.688 282 147 13 14 283 6 259 1.49e-38 142
MS.gene77423.t1 AT3G44290 46.825 126 64 2 15 139 15 138 9.79e-37 134
MS.gene77423.t1 AT2G27300 43.750 128 69 2 13 139 13 138 1.90e-36 136
MS.gene77423.t1 AT3G44290 46.825 126 64 2 15 139 15 138 2.99e-36 135
MS.gene77423.t1 AT2G43000 61.538 104 29 3 76 179 2 94 5.31e-35 128
MS.gene77423.t1 AT5G04395 42.857 140 66 2 16 141 30 169 1.44e-33 124
MS.gene77423.t1 AT5G61430 51.754 114 43 3 62 173 1 104 6.18e-33 125
MS.gene77423.t1 AT5G22380 34.199 231 130 11 11 234 3 218 8.90e-32 120
MS.gene77423.t1 AT1G32870 42.169 166 80 5 14 175 10 163 1.26e-31 126
MS.gene77423.t1 AT1G32870 42.169 166 80 5 14 175 10 163 1.27e-31 126
MS.gene77423.t1 AT1G32870 42.169 166 80 5 14 175 46 199 2.70e-31 125
MS.gene77423.t1 AT5G64530 37.870 169 87 3 16 178 5 161 3.32e-31 117
MS.gene77423.t1 AT4G10350 50.877 114 46 2 61 174 12 115 7.08e-31 120
MS.gene77423.t1 AT3G12977 48.696 115 50 3 63 177 14 119 3.03e-30 116
MS.gene77423.t1 AT5G64530 44.882 127 58 2 16 142 5 119 5.36e-30 114
MS.gene77423.t1 AT3G44350 31.739 230 129 8 10 222 1 219 1.59e-29 115
MS.gene77423.t1 AT1G56010 48.649 111 50 3 62 172 1 104 1.66e-28 112
MS.gene77423.t1 AT3G44350 39.130 138 74 4 10 140 1 135 4.84e-28 108
MS.gene77423.t1 AT4G01550 29.392 296 172 10 15 293 5 280 1.92e-27 113
MS.gene77423.t1 AT4G01520 38.462 143 81 5 17 154 7 147 4.42e-25 104
MS.gene77423.t1 AT4G01540 39.310 145 81 5 15 154 5 147 7.93e-25 105
MS.gene77423.t1 AT4G01540 39.310 145 81 5 15 154 5 147 1.02e-24 105
MS.gene77423.t1 AT4G01540 39.310 145 81 5 15 154 5 147 1.33e-24 105
MS.gene77423.t1 AT4G01540 39.310 145 81 5 15 154 5 147 1.54e-24 104
MS.gene77423.t1 AT2G33480 42.342 111 54 3 67 177 8 108 8.94e-22 93.2
MS.gene77423.t1 AT2G18060 49.485 97 36 4 92 188 2 85 1.15e-21 94.4
MS.gene77423.t1 AT4G28530 38.889 126 61 2 16 125 12 137 3.49e-21 93.6
MS.gene77423.t1 AT1G02230 39.098 133 73 4 17 144 6 135 5.89e-21 93.6
MS.gene77423.t1 AT1G02250 41.406 128 67 4 17 139 6 130 1.31e-20 92.8
MS.gene77423.t1 AT3G04420 39.370 127 71 3 17 139 6 130 1.62e-20 91.3
MS.gene77423.t1 AT3G04420 39.370 127 71 3 17 139 6 130 6.53e-20 90.5
MS.gene77423.t1 AT1G01010 39.706 136 66 7 17 140 6 137 1.02e-17 85.1
MS.gene77423.t1 AT1G02220 39.370 127 68 4 17 139 6 127 9.89e-17 81.6
MS.gene77423.t1 AT5G14000 33.094 139 83 4 5 141 10 140 1.69e-15 73.9
MS.gene77423.t1 AT5G14000 27.976 168 103 5 15 179 15 167 1.96e-15 75.1
MS.gene77423.t1 AT5G50820 35.878 131 72 5 16 143 19 140 2.18e-15 74.7
MS.gene77423.t1 AT3G56530 32.283 127 81 3 16 139 54 178 3.78e-14 73.2
MS.gene77423.t1 AT3G04430 33.835 133 74 5 20 140 6 136 5.23e-13 67.8
MS.gene77423.t1 AT3G10490 37.634 93 39 3 87 174 2 80 5.43e-13 70.1
MS.gene77423.t1 AT3G10490 37.634 93 39 3 87 174 2 80 5.43e-13 70.1
MS.gene77423.t1 AT5G22290 39.560 91 36 4 93 180 2 76 1.34e-11 64.7
MS.gene77423.t1 AT3G56520 25.000 180 99 7 17 182 11 168 9.49e-11 60.8

Find 81 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATGTTGTTTGAACAAAAT+TGG 0.184460 5.1:-30516804 None:intergenic
AAGTTATCTTACCAGGATTT+AGG 0.220891 5.1:+30515263 MS.gene77423:CDS
GAAACAGTGCAAGGCCTAAT+AGG 0.247551 5.1:+30515870 MS.gene77423:CDS
TGAAACATCCATTGTAGATT+TGG 0.251668 5.1:-30517046 None:intergenic
TTTGTTGAACCTTTCTCTTT+AGG 0.261897 5.1:-30515321 None:intergenic
GGGTAACTGGAGCTGGATTC+TGG 0.266844 5.1:+30515891 MS.gene77423:CDS
CCAATGCATTATTATCATAT+TGG 0.276292 5.1:-30517206 None:intergenic
GGACTAATAGTGGATTTATA+AGG 0.293506 5.1:-30516907 None:intergenic
ACATTCACATTAACATTATA+AGG 0.303980 5.1:-30517237 None:intergenic
ACTAAGATCTTCATTTGAAA+TGG 0.313776 5.1:-30516959 None:intergenic
CATGGAAGTCAAATTTGCTT+TGG 0.326417 5.1:+30517307 MS.gene77423:CDS
GAATTGATGAATTTCAATAT+TGG 0.333275 5.1:+30517279 MS.gene77423:CDS
GCAAGGCCTAATAGGGTAAC+TGG 0.368447 5.1:+30515878 MS.gene77423:CDS
AAGAGCTTTGTCACACTCTT+GGG 0.374809 5.1:+30516723 MS.gene77423:CDS
GAACCTTCTGAGGAGTAGAT+AGG 0.383654 5.1:-30515935 None:intergenic
CAACTGATGAAGAGCTTGTT+GGG 0.385394 5.1:+30515293 MS.gene77423:CDS
TAACTAGAGGGAACATCAAT+AGG 0.388427 5.1:-30517345 None:intergenic
AAAAGACTAAGGATTTCTTT+AGG 0.389485 5.1:-30515970 None:intergenic
GACTAATAGTGGATTTATAA+GGG 0.390776 5.1:-30516906 None:intergenic
ATGGAAGTCAAATTTGCTTT+GGG 0.392121 5.1:+30517308 MS.gene77423:CDS
CATGTTGTTTGAACAAAATT+GGG 0.393384 5.1:-30516803 None:intergenic
CCAGCTCCAGTTACCCTATT+AGG 0.395888 5.1:-30515884 None:intergenic
AAAGAGCTTTGTCACACTCT+TGG 0.396032 5.1:+30516722 MS.gene77423:CDS
TCTTCCTTTGTAAAAGACTA+AGG 0.405196 5.1:-30515981 None:intergenic
TGATAATAATGCATTGGTTA+AGG 0.409165 5.1:+30517212 MS.gene77423:CDS
TAGAGGTTCTTGTTTCAGAT+AGG 0.410820 5.1:-30516753 None:intergenic
CCAACTGATGAAGAGCTTGT+TGG 0.413211 5.1:+30515292 MS.gene77423:CDS
CTAAGATCTTCATTTGAAAT+GGG 0.433260 5.1:-30516958 None:intergenic
ACAACTACAAATTTCATGAA+TGG 0.443610 5.1:+30517135 MS.gene77423:CDS
AGTGACTACTCATTACCATT+TGG 0.444946 5.1:+30517177 MS.gene77423:CDS
AAGTACTTCTTTGGTGAAAG+TGG 0.447802 5.1:-30516067 None:intergenic
CTTGATGAAGTTATCTTACC+AGG 0.449714 5.1:+30515256 MS.gene77423:CDS
AAACAGTGCAAGGCCTAATA+GGG 0.452535 5.1:+30515871 MS.gene77423:CDS
GCTGGATTCTGGAAAGCTAC+AGG 0.462218 5.1:+30515902 MS.gene77423:CDS
GTGTAGTAATGGACTAATAG+TGG 0.462562 5.1:-30516917 None:intergenic
TTTCTTTAGGCCAATGCACT+TGG 0.465693 5.1:-30515957 None:intergenic
CCTAATAGGGTAACTGGAGC+TGG 0.468839 5.1:+30515884 MS.gene77423:CDS
AGTGTAGAAGTGGTTGGTTA+AGG 0.469671 5.1:-30516845 None:intergenic
ACTTTCACCAAAGAAGTACT+TGG 0.472752 5.1:+30516069 MS.gene77423:CDS
ACTGGATGATGCATGAGTTC+AGG 0.474694 5.1:+30516026 MS.gene77423:CDS
GTCTTACTTGGAAGATCCCA+TGG 0.475315 5.1:-30515394 None:intergenic
TAAAGTTTACTCACATTAGC+AGG 0.478939 5.1:-30516103 None:intergenic
AGAGGTTCTTGTTTCAGATA+GGG 0.482157 5.1:-30516752 None:intergenic
TACAAAGGAAGAGCTGCTAA+AGG 0.482478 5.1:+30515992 MS.gene77423:CDS
TCATATTGGTAATTACCAAA+TGG 0.486227 5.1:-30517192 None:intergenic
TGTGTAGAGTTTGCAAGTAC+AGG 0.488055 5.1:+30515803 MS.gene77423:intron
TTTACTCACATTAGCAGGAA+TGG 0.489171 5.1:-30516098 None:intergenic
ACTACAAATTTCATGAATGG+TGG 0.505591 5.1:+30517138 MS.gene77423:CDS
ATATCTATAAATATGATCCA+TGG 0.506117 5.1:+30515377 MS.gene77423:CDS
GTTGGATGAAACCTAAATCC+TGG 0.518377 5.1:-30515274 None:intergenic
CCAATATGATAATAATGCAT+TGG 0.521267 5.1:+30517206 MS.gene77423:CDS
CTACAAATTTCATGAATGGT+GGG 0.522679 5.1:+30517139 MS.gene77423:CDS
AATGCACTTGGAACCTTCTG+AGG 0.523326 5.1:-30515945 None:intergenic
CTAAAGGAATCAAAACTGAC+TGG 0.527746 5.1:+30516008 MS.gene77423:CDS
GAAAGTGGATCTATGAGAGA+AGG 0.536482 5.1:-30516052 None:intergenic
TGAAATGGGCAAGTGATGAA+AGG 0.548325 5.1:-30516944 None:intergenic
TAACATCTACATCAAAGTCT+TGG 0.551480 5.1:-30516882 None:intergenic
CATTGTTGTTAGTGTAGAAG+TGG 0.554564 5.1:-30516855 None:intergenic
TCAGAAGGTTCCAAGTGCAT+TGG 0.555187 5.1:+30515947 MS.gene77423:CDS
GTTAAAGTCACCAAGCATTG+AGG 0.557277 5.1:-30517094 None:intergenic
CCAACAAGCTCTTCATCAGT+TGG 0.559889 5.1:-30515292 None:intergenic
TGAAAGGCTTTGTGTAGTAA+TGG 0.568461 5.1:-30516928 None:intergenic
GTTGTTAGTGTAGAAGTGGT+TGG 0.570750 5.1:-30516851 None:intergenic
TTAGTGTTAGATGTTTCAAG+TGG 0.573001 5.1:-30517009 None:intergenic
ATGTCATCATCCTCAATGCT+TGG 0.574915 5.1:+30517084 MS.gene77423:CDS
CAAGTACAGGAGAGAAAGAG+TGG 0.578025 5.1:+30515816 MS.gene77423:CDS
TATTATTTCCAAATCTACAA+TGG 0.582705 5.1:+30517038 MS.gene77423:CDS
ATTTCAATATTGGTGATGCA+TGG 0.583124 5.1:+30517289 MS.gene77423:CDS
TATCTATAAATATGATCCAT+GGG 0.583366 5.1:+30515378 MS.gene77423:CDS
AAACCTATCTACTCCTCAGA+AGG 0.590506 5.1:+30515932 MS.gene77423:CDS
CTGGATTCTGGAAAGCTACA+GGG 0.596618 5.1:+30515903 MS.gene77423:CDS
CTTGGTTGTTGAATAACTAG+AGG 0.600536 5.1:-30517358 None:intergenic
GATATGGAAGAAAGAAACGA+TGG 0.612771 5.1:+30515226 None:intergenic
ACTAATAGTGGATTTATAAG+GGG 0.623822 5.1:-30516905 None:intergenic
TACAAATTAAGTGTAACACT+TGG 0.625059 5.1:-30517376 None:intergenic
TTGGTTGTTGAATAACTAGA+GGG 0.629756 5.1:-30517357 None:intergenic
GAAAATACAGAAACAGTGCA+AGG 0.653407 5.1:+30515861 MS.gene77423:CDS
TAAAGAGAAAGGTTCAACAA+AGG 0.656075 5.1:+30515323 MS.gene77423:CDS
CTTTAACAAGACATGTGATG+AGG 0.658516 5.1:+30517110 MS.gene77423:CDS
AATTCTTGTTCATCAATACG+AGG 0.699073 5.1:-30517261 None:intergenic
TTGATGAGCTCAATAGACAG+AGG 0.712731 5.1:-30515346 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATATATAAGTATTTATA+TGG - chr5.1:30515493-30515512 None:intergenic 10.0%
!!! TTTTTGTTATAAAAAAACTT+AGG + chr5.1:30516578-30516597 MS.gene77423:intron 10.0%
!! AAAAATATACTTAGAATTAG+AGG - chr5.1:30516248-30516267 None:intergenic 15.0%
!! AAAATATACTTAGAATTAGA+GGG - chr5.1:30516247-30516266 None:intergenic 15.0%
!! AAATATCATTTATGGAATTA+TGG + chr5.1:30516621-30516640 MS.gene77423:intron 15.0%
!!! AACATTTTTAATGATTTTAG+CGG + chr5.1:30516497-30516516 MS.gene77423:intron 15.0%
!!! GACAAATATTTTAAATGAAA+TGG + chr5.1:30516377-30516396 MS.gene77423:intron 15.0%
!! ACATTCACATTAACATTATA+AGG - chr5.1:30517240-30517259 None:intergenic 20.0%
!! ATATCTATAAATATGATCCA+TGG + chr5.1:30515377-30515396 MS.gene77423:CDS 20.0%
!! GAATTGATGAATTTCAATAT+TGG + chr5.1:30517279-30517298 MS.gene77423:CDS 20.0%
!! GTGTTTGTAAATATCATTTA+TGG + chr5.1:30516613-30516632 MS.gene77423:intron 20.0%
!! TATCTATAAATATGATCCAT+GGG + chr5.1:30515378-30515397 MS.gene77423:CDS 20.0%
!! TATTATTTCCAAATCTACAA+TGG + chr5.1:30517038-30517057 MS.gene77423:CDS 20.0%
!!! AAGAAGATTGATAATAGTTA+AGG + chr5.1:30515562-30515581 MS.gene77423:intron 20.0%
! AAAAGACTAAGGATTTCTTT+AGG - chr5.1:30515973-30515992 None:intergenic 25.0%
! ACAACTACAAATTTCATGAA+TGG + chr5.1:30517135-30517154 MS.gene77423:CDS 25.0%
! ACTAAGATCTTCATTTGAAA+TGG - chr5.1:30516962-30516981 None:intergenic 25.0%
! AGACACTTAAATATCTTTGT+TGG + chr5.1:30515418-30515437 MS.gene77423:intron 25.0%
! ATGCTATAAGCACTTAATTA+AGG - chr5.1:30515461-30515480 None:intergenic 25.0%
! CCAATATGATAATAATGCAT+TGG + chr5.1:30517206-30517225 MS.gene77423:CDS 25.0%
! CCAATGCATTATTATCATAT+TGG - chr5.1:30517209-30517228 None:intergenic 25.0%
! TGCTATAAGCACTTAATTAA+GGG - chr5.1:30515460-30515479 None:intergenic 25.0%
! TTCTATTACAAAAGTCAAAC+TGG + chr5.1:30515517-30515536 MS.gene77423:intron 25.0%
!! ACATGTTGTTTGAACAAAAT+TGG - chr5.1:30516807-30516826 None:intergenic 25.0%
!! CATGTTGTTTGAACAAAATT+GGG - chr5.1:30516806-30516825 None:intergenic 25.0%
!! CTAAGATCTTCATTTGAAAT+GGG - chr5.1:30516961-30516980 None:intergenic 25.0%
!! TCATATTGGTAATTACCAAA+TGG - chr5.1:30517195-30517214 None:intergenic 25.0%
!!! AAATCCTTAGTCTTTTACAA+AGG + chr5.1:30515977-30515996 MS.gene77423:CDS 25.0%
!!! ACTAATAGTGGATTTATAAG+GGG - chr5.1:30516908-30516927 None:intergenic 25.0%
!!! ATTTTTGGTTAGCATATTAG+AGG - chr5.1:30516773-30516792 None:intergenic 25.0%
!!! GACTAATAGTGGATTTATAA+GGG - chr5.1:30516909-30516928 None:intergenic 25.0%
!!! TGATAATAATGCATTGGTTA+AGG + chr5.1:30517212-30517231 MS.gene77423:CDS 25.0%
!!! TTTATTTCTATAAGTTCTCC+AGG - chr5.1:30515683-30515702 None:intergenic 25.0%
AAGTTATCTTACCAGGATTT+AGG + chr5.1:30515263-30515282 MS.gene77423:CDS 30.0%
AATTCTTGTTCATCAATACG+AGG - chr5.1:30517264-30517283 None:intergenic 30.0%
ACACTGTTTAGCATAGTTTA+TGG - chr5.1:30515747-30515766 None:intergenic 30.0%
ACTACAAATTTCATGAATGG+TGG + chr5.1:30517138-30517157 MS.gene77423:CDS 30.0%
CATTACGATCCTTGATATTA+TGG + chr5.1:30516169-30516188 MS.gene77423:intron 30.0%
CTACAAATTTCATGAATGGT+GGG + chr5.1:30517139-30517158 MS.gene77423:CDS 30.0%
GACATTGTCAATATCATAGT+TGG + chr5.1:30516435-30516454 MS.gene77423:intron 30.0%
TAAAGAGAAAGGTTCAACAA+AGG + chr5.1:30515323-30515342 MS.gene77423:CDS 30.0%
TAAAGTTTACTCACATTAGC+AGG - chr5.1:30516106-30516125 None:intergenic 30.0%
TAACATCTACATCAAAGTCT+TGG - chr5.1:30516885-30516904 None:intergenic 30.0%
TCTTCCTTTGTAAAAGACTA+AGG - chr5.1:30515984-30516003 None:intergenic 30.0%
TGAAACATCCATTGTAGATT+TGG - chr5.1:30517049-30517068 None:intergenic 30.0%
TTAGCATAGTTTATGGAAAG+TGG - chr5.1:30515740-30515759 None:intergenic 30.0%
TTAGTGTTAGATGTTTCAAG+TGG - chr5.1:30517012-30517031 None:intergenic 30.0%
TTGGTTGTTGAATAACTAGA+GGG - chr5.1:30517360-30517379 None:intergenic 30.0%
TTTAAGTGTCTTGTCTTACT+TGG - chr5.1:30515409-30515428 None:intergenic 30.0%
TTTGTTGAACCTTTCTCTTT+AGG - chr5.1:30515324-30515343 None:intergenic 30.0%
! ATGGAAGTCAAATTTGCTTT+GGG + chr5.1:30517308-30517327 MS.gene77423:CDS 30.0%
! TTGGGTGATTTCTTGATTTT+TGG - chr5.1:30516788-30516807 None:intergenic 30.0%
! TTTCTGTATTTTCTGTCTCT+TGG - chr5.1:30515854-30515873 None:intergenic 30.0%
! TTTTAACATGCAGGAATCAT+GGG + chr5.1:30516660-30516679 MS.gene77423:intron 30.0%
!! ATTTCAATATTGGTGATGCA+TGG + chr5.1:30517289-30517308 MS.gene77423:CDS 30.0%
!! GGACTAATAGTGGATTTATA+AGG - chr5.1:30516910-30516929 None:intergenic 30.0%
!! GTTGTTTTCATAAGTTATCC+TGG + chr5.1:30515662-30515681 MS.gene77423:intron 30.0%
!! TAACTTGTCTTTTAACATGC+AGG + chr5.1:30516651-30516670 MS.gene77423:intron 30.0%
AAGTACTTCTTTGGTGAAAG+TGG - chr5.1:30516070-30516089 None:intergenic 35.0%
AGTGACTACTCATTACCATT+TGG + chr5.1:30517177-30517196 MS.gene77423:CDS 35.0%
ATGAAATGGTTGCAATGAGA+TGG + chr5.1:30516391-30516410 MS.gene77423:intron 35.0%
CTAAAGGAATCAAAACTGAC+TGG + chr5.1:30516008-30516027 MS.gene77423:CDS 35.0%
CTTGATGAAGTTATCTTACC+AGG + chr5.1:30515256-30515275 MS.gene77423:CDS 35.0%
CTTGGTTGTTGAATAACTAG+AGG - chr5.1:30517361-30517380 None:intergenic 35.0%
CTTTAACAAGACATGTGATG+AGG + chr5.1:30517110-30517129 MS.gene77423:CDS 35.0%
GAAAATACAGAAACAGTGCA+AGG + chr5.1:30515861-30515880 MS.gene77423:CDS 35.0%
TAACTAGAGGGAACATCAAT+AGG - chr5.1:30517348-30517367 None:intergenic 35.0%
TGCGATTCTCCATAATATCA+AGG - chr5.1:30516181-30516200 None:intergenic 35.0%
TTTACTCACATTAGCAGGAA+TGG - chr5.1:30516101-30516120 None:intergenic 35.0%
! AGAGGTTCTTGTTTCAGATA+GGG - chr5.1:30516755-30516774 None:intergenic 35.0%
! CATGGAAGTCAAATTTGCTT+TGG + chr5.1:30517307-30517326 MS.gene77423:CDS 35.0%
! CATTGTTGTTAGTGTAGAAG+TGG - chr5.1:30516858-30516877 None:intergenic 35.0%
! CTTTTAACATGCAGGAATCA+TGG + chr5.1:30516659-30516678 MS.gene77423:intron 35.0%
! GTTTTCTCCAAGTACTTCTT+TGG - chr5.1:30516079-30516098 None:intergenic 35.0%
! TAGAGGTTCTTGTTTCAGAT+AGG - chr5.1:30516756-30516775 None:intergenic 35.0%
! TGAAAGGCTTTGTGTAGTAA+TGG - chr5.1:30516931-30516950 None:intergenic 35.0%
! TGGGTTTTACCTAAAGAGAA+AGG + chr5.1:30515312-30515331 MS.gene77423:CDS 35.0%
!! AAGTCAAACTGGTTCGATAT+AGG + chr5.1:30515528-30515547 MS.gene77423:intron 35.0%
!! ACTTTCACCAAAGAAGTACT+TGG + chr5.1:30516069-30516088 MS.gene77423:CDS 35.0%
!! GTGTAGTAATGGACTAATAG+TGG - chr5.1:30516920-30516939 None:intergenic 35.0%
AAACAGTGCAAGGCCTAATA+GGG + chr5.1:30515871-30515890 MS.gene77423:CDS 40.0%
AAACCTATCTACTCCTCAGA+AGG + chr5.1:30515932-30515951 MS.gene77423:CDS 40.0%
AAATGGTTGCAATGAGATGG+AGG + chr5.1:30516394-30516413 MS.gene77423:intron 40.0%
AATGGTTGCAATGAGATGGA+GGG + chr5.1:30516395-30516414 MS.gene77423:intron 40.0%
ATGTCATCATCCTCAATGCT+TGG + chr5.1:30517084-30517103 MS.gene77423:CDS 40.0%
CACCGTACAGAATGTTGTAT+CGG - chr5.1:30516537-30516556 None:intergenic 40.0%
GAAAGTGGATCTATGAGAGA+AGG - chr5.1:30516055-30516074 None:intergenic 40.0%
GACCGATACAACATTCTGTA+CGG + chr5.1:30516532-30516551 MS.gene77423:intron 40.0%
GTTGGATGAAACCTAAATCC+TGG - chr5.1:30515277-30515296 None:intergenic 40.0%
GTTGTTAGTGTAGAAGTGGT+TGG - chr5.1:30516854-30516873 None:intergenic 40.0%
TACAAAGGAAGAGCTGCTAA+AGG + chr5.1:30515992-30516011 MS.gene77423:CDS 40.0%
TGAAATGGGCAAGTGATGAA+AGG - chr5.1:30516947-30516966 None:intergenic 40.0%
TGTGTAGAGTTTGCAAGTAC+AGG + chr5.1:30515803-30515822 MS.gene77423:intron 40.0%
TTGATGAGCTCAATAGACAG+AGG - chr5.1:30515349-30515368 None:intergenic 40.0%
TTTCTTTAGGCCAATGCACT+TGG - chr5.1:30515960-30515979 None:intergenic 40.0%
! AAAGAGCTTTGTCACACTCT+TGG + chr5.1:30516722-30516741 MS.gene77423:CDS 40.0%
! AAGAGCTTTGTCACACTCTT+GGG + chr5.1:30516723-30516742 MS.gene77423:CDS 40.0%
! AGTGTAGAAGTGGTTGGTTA+AGG - chr5.1:30516848-30516867 None:intergenic 40.0%
! AGTTAAGGTGCTAACCTAGT+TGG + chr5.1:30515577-30515596 MS.gene77423:intron 40.0%
! CAACTGATGAAGAGCTTGTT+GGG + chr5.1:30515293-30515312 MS.gene77423:CDS 40.0%
! GTTAAAGTCACCAAGCATTG+AGG - chr5.1:30517097-30517116 None:intergenic 40.0%
! GTTAAGGTGCTAACCTAGTT+GGG + chr5.1:30515578-30515597 MS.gene77423:intron 40.0%
AACTCGTGCGATGTCAACAT+AGG + chr5.1:30516210-30516229 MS.gene77423:intron 45.0%
AATGCACTTGGAACCTTCTG+AGG - chr5.1:30515948-30515967 None:intergenic 45.0%
ACTGGATGATGCATGAGTTC+AGG + chr5.1:30516026-30516045 MS.gene77423:CDS 45.0%
CAAGTACAGGAGAGAAAGAG+TGG + chr5.1:30515816-30515835 MS.gene77423:CDS 45.0%
CCAACAAGCTCTTCATCAGT+TGG - chr5.1:30515295-30515314 None:intergenic 45.0%
CCAACTGATGAAGAGCTTGT+TGG + chr5.1:30515292-30515311 MS.gene77423:CDS 45.0%
GAAACAGTGCAAGGCCTAAT+AGG + chr5.1:30515870-30515889 MS.gene77423:CDS 45.0%
GTCTTACTTGGAAGATCCCA+TGG - chr5.1:30515397-30515416 None:intergenic 45.0%
TCAGAAGGTTCCAAGTGCAT+TGG + chr5.1:30515947-30515966 MS.gene77423:CDS 45.0%
! CTGGATTCTGGAAAGCTACA+GGG + chr5.1:30515903-30515922 MS.gene77423:CDS 45.0%
! GAACCTTCTGAGGAGTAGAT+AGG - chr5.1:30515938-30515957 None:intergenic 45.0%
!!! ATTATTAATATAGATATTTT+AGG - chr5.1:30516318-30516337 None:intergenic 5.0%
AACGTGCGAACATCCCAACT+AGG - chr5.1:30515594-30515613 None:intergenic 50.0%
CCAGCTCCAGTTACCCTATT+AGG - chr5.1:30515887-30515906 None:intergenic 50.0%
CCTAATAGGGTAACTGGAGC+TGG + chr5.1:30515884-30515903 MS.gene77423:CDS 50.0%
GCAAGGCCTAATAGGGTAAC+TGG + chr5.1:30515878-30515897 MS.gene77423:CDS 50.0%
! GCTGGATTCTGGAAAGCTAC+AGG + chr5.1:30515902-30515921 MS.gene77423:CDS 50.0%
GGGTAACTGGAGCTGGATTC+TGG + chr5.1:30515891-30515910 MS.gene77423:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 30515229 30517392 30515229 ID=MS.gene77423
chr5.1 mRNA 30515229 30517392 30515229 ID=MS.gene77423.t1;Parent=MS.gene77423
chr5.1 exon 30515229 30515409 30515229 ID=MS.gene77423.t1.exon1;Parent=MS.gene77423.t1
chr5.1 CDS 30515229 30515409 30515229 ID=cds.MS.gene77423.t1;Parent=MS.gene77423.t1
chr5.1 exon 30515810 30516111 30515810 ID=MS.gene77423.t1.exon2;Parent=MS.gene77423.t1
chr5.1 CDS 30515810 30516111 30515810 ID=cds.MS.gene77423.t1;Parent=MS.gene77423.t1
chr5.1 exon 30516673 30517392 30516673 ID=MS.gene77423.t1.exon3;Parent=MS.gene77423.t1
chr5.1 CDS 30516673 30517392 30516673 ID=cds.MS.gene77423.t1;Parent=MS.gene77423.t1
Gene Sequence

>MS.gene77423

ATGGAAGAAAGAAACGATGGTGAAAAACTTGATGAAGTTATCTTACCAGGATTTAGGTTTCATCCAACTGATGAAGAGCTTGTTGGGTTTTACCTAAAGAGAAAGGTTCAACAAAGGCCTCTGTCTATTGAGCTCATCAAGCAGCTTGATATCTATAAATATGATCCATGGGATCTTCCAAGTAAGACAAGACACTTAAATATCTTTGTTGGTTCTTCACATATATAACCCTTAATTAAGTGCTTATAGCATACACGCTTACCATATAAATACTTATATATAAGATATTTCTATTACAAAAGTCAAACTGGTTCGATATAGGCTTGCATACTAAAGAAGATTGATAATAGTTAAGGTGCTAACCTAGTTGGGATGTTCGCACGTTACATTAATGTTTTGCATGTCTAACTTTTATCAACAAAAGAAGTCATAAGTTGTTTTCATAAGTTATCCTGGAGAACTTATAGAAATAAACGAAAAAAAGTTTAAGACTTGTCATAAGCAATTTCCACTTTCCATAAACTATGCTAAACAGTGTCACAAGTACTAATATATATGTTTGTATGATTGTATGTGTGTAGAGTTTGCAAGTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGATTCTGGAAAGCTACAGGGACAGATAAACCTATCTACTCCTCAGAAGGTTCCAAGTGCATTGGCCTAAAGAAATCCTTAGTCTTTTACAAAGGAAGAGCTGCTAAAGGAATCAAAACTGACTGGATGATGCATGAGTTCAGGCTACCTTCTCTCATAGATCCACTTTCACCAAAGAAGTACTTGGAGAAAACCATTCCTGCTAATGTGAGTAAACTTTATCATTATCTTAGCAAATTTAAGTTATCATTTTCAATGCAATCACATTACGATCCTTGATATTATGGAGAATCGCAGTCAAATGTAACTCGTGCGATGTCAACATAGGTTGCATGAACTCCCTCTAATTCTAAGTATATTTTTATGAAAATGATTAGTCTATGTTGAAATATGTAGTTAAAAATTGTGTGCCTAAAATATCTATATTAATAATAAATGTTGTATTTGTATTCTAAAGTGAGAAATAATTTGAGACAAATATTTTAAATGAAATGGTTGCAATGAGATGGAGGGAGTATCAAAAACTTGTTGACATTGTCAATATCATAGTTGGTCATATGCGTGACTTTAAAAATAGTTATGAATAAAGTCAAACATTTTTAATGATTTTAGCGGTTATAATTTATTGACCGATACAACATTCTGTACGGTGTGATGTATATGAATTTTTTTATTTTTGTTATAAAAAAACTTAGGTTTTAATTGTTAGTGTTTGTAAATATCATTTATGGAATTATGGACATCTTTAACTTGTCTTTTAACATGCAGGAATCATGGGCTATCTGTAGAATATTCAAGAAAACAAATTCTACAGCTCAAAGAGCTTTGTCACACTCTTGGGTTTCTTCCCTATCTGAAACAAGAACCTCTAATATGCTAACCAAAAATCAAGAAATCACCCAATTTTGTTCAAACAACATGTCATTGACAAAGAGTACATCCTTAACCAACCACTTCTACACTAACAACAATGATAACCAAGACTTTGATGTAGATGTTACCCCTTATAAATCCACTATTAGTCCATTACTACACAAAGCCTTTCATCACTTGCCCATTTCAAATGAAGATCTTAGTACTAACTTGATATTCTCATCATCATCTCCACTTGAAACATCTAACACTAATAGTGATATTATTTCCAAATCTACAATGGATGTTTCATCAATGTTGTTGAATATGTCATCATCCTCAATGCTTGGTGACTTTAACAAGACATGTGATGAGGTTACAACTACAAATTTCATGAATGGTGGGTTGCAAGAGCAATTTAGTGACTACTCATTACCATTTGGTAATTACCAATATGATAATAATGCATTGGTTAAGGTACCTTATAATGTTAATGTGAATGTGCCTCGTATTGATGAACAAGAATTGATGAATTTCAATATTGGTGATGCATGGAAGTCAAATTTGCTTTGGGATACTTCATTTTGTCCTATTGATGTTCCCTCTAGTTATTCAACAACCAAGTGTTACACTTAA
Protein sequence

>MS.gene77423.t1

MEERNDGEKLDEVILPGFRFHPTDEELVGFYLKRKVQQRPLSIELIKQLDIYKYDPWDLPKFASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDKPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLIDPLSPKKYLEKTIPANESWAICRIFKKTNSTAQRALSHSWVSSLSETRTSNMLTKNQEITQFCSNNMSLTKSTSLTNHFYTNNNDNQDFDVDVTPYKSTISPLLHKAFHHLPISNEDLSTNLIFSSSSPLETSNTNSDIISKSTMDVSSMLLNMSSSSMLGDFNKTCDEVTTTNFMNGGLQEQFSDYSLPFGNYQYDNNALVKVPYNVNVNVPRIDEQELMNFNIGDAWKSNLLWDTSFCPIDVPSSYSTTKCYT