AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene77573

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77573.t1 MTR_3g084980 99.187 246 0 1 1 246 1 244 0.0 501
MS.gene77573.t1 MTR_8g097090 84.211 247 33 5 1 246 1 242 3.21e-149 416
MS.gene77573.t1 MTR_6g015975 65.759 257 68 6 1 245 1 249 2.62e-110 318
MS.gene77573.t1 MTR_7g016600 64.314 255 74 6 1 245 1 248 5.19e-105 304
MS.gene77573.t1 MTR_4g109810 56.195 226 87 5 1 222 1 218 8.77e-78 235
MS.gene77573.t1 MTR_8g033270 50.584 257 108 7 1 245 1 250 2.99e-74 226
MS.gene77573.t1 MTR_7g075850 49.805 257 109 7 1 245 1 249 4.08e-73 223
MS.gene77573.t1 MTR_4g109830 58.046 174 64 2 1 171 1 168 3.52e-59 187
MS.gene77573.t1 MTR_8g066260 55.556 171 73 1 1 171 1 168 3.08e-57 182
MS.gene77573.t1 MTR_6g464720 53.448 174 73 2 1 171 1 169 6.54e-54 174
MS.gene77573.t1 MTR_7g016630 46.939 196 99 2 1 196 1 191 2.02e-49 163
MS.gene77573.t1 MTR_5g046790 48.619 181 80 3 1 176 1 173 2.06e-49 161
MS.gene77573.t1 MTR_1g101970 49.425 174 79 3 1 171 1 168 6.86e-49 159
MS.gene77573.t1 MTR_8g087860 41.518 224 126 3 1 223 17 236 4.62e-47 156
MS.gene77573.t1 MTR_2g017865 46.591 176 88 3 1 175 16 186 2.64e-45 152
MS.gene77573.t1 MTR_5g046870 83.951 81 13 0 1 81 1 81 3.66e-45 147
MS.gene77573.t1 MTR_3g005530 47.191 178 84 3 1 175 1 171 5.01e-44 148
MS.gene77573.t1 MTR_4g102530 48.876 178 73 4 1 171 1 167 5.60e-44 147
MS.gene77573.t1 MTR_3g452380 48.315 178 82 4 1 175 16 186 2.80e-43 147
MS.gene77573.t1 MTR_8g033220 44.944 178 95 2 1 178 1 175 3.18e-42 143
MS.gene77573.t1 MTR_8g033220 44.944 178 95 2 1 178 1 175 3.97e-42 143
MS.gene77573.t1 MTR_7g075870 47.953 171 86 2 1 171 1 168 1.06e-41 142
MS.gene77573.t1 MTR_7g075870 47.953 171 85 3 1 171 1 167 6.34e-40 137
MS.gene77573.t1 MTR_2g009890 42.703 185 101 2 1 185 1 180 3.52e-38 134
MS.gene77573.t1 MTR_5g031000 36.574 216 131 2 1 216 1 210 1.34e-37 131
MS.gene77573.t1 MTR_5g031000 40.323 186 105 2 1 186 1 180 4.81e-37 130
MS.gene77573.t1 MTR_4g036050 41.520 171 98 1 1 171 1 169 5.05e-36 127
MS.gene77573.t1 MTR_5g046830 43.506 154 80 2 96 245 21 171 6.89e-35 123
MS.gene77573.t1 MTR_1g038300 39.535 172 103 1 1 171 1 172 1.83e-34 124
MS.gene77573.t1 MTR_1g053070 44.022 184 87 5 1 176 1 176 2.59e-34 124
MS.gene77573.t1 MTR_0003s0590 42.614 176 99 2 1 176 1 174 3.10e-34 124
MS.gene77573.t1 MTR_4g036050 41.250 160 92 1 1 160 1 158 6.95e-34 121
MS.gene77573.t1 MTR_4g036050 42.857 147 82 1 1 147 1 145 4.79e-33 118
MS.gene77573.t1 MTR_4g036050 43.151 146 81 1 1 146 1 144 8.61e-33 118
MS.gene77573.t1 MTR_3g088615 41.333 150 79 3 1 149 1 142 2.95e-31 114
MS.gene77573.t1 MTR_3g113030 41.615 161 86 2 1 161 1 153 3.03e-31 115
MS.gene77573.t1 MTR_5g032150 40.678 177 101 3 1 177 1 173 5.19e-30 112
MS.gene77573.t1 MTR_2g461710 84.746 59 9 0 1 59 1 59 5.47e-30 107
MS.gene77573.t1 MTR_5g066180 37.073 205 107 5 1 192 1 196 2.02e-29 110
MS.gene77573.t1 MTR_1g029670 35.567 194 101 5 1 186 1 178 2.83e-29 108
MS.gene77573.t1 MTR_5g032520 38.587 184 95 3 1 177 1 173 6.31e-29 109
MS.gene77573.t1 MTR_4g093970 38.547 179 94 4 1 172 27 196 1.07e-27 106
MS.gene77573.t1 MTR_5g021270 40.260 154 81 3 1 150 1 147 1.08e-26 103
MS.gene77573.t1 MTR_5g021270 40.260 154 81 3 1 150 1 147 1.08e-26 103
MS.gene77573.t1 MTR_5g066960 63.333 60 22 0 1 60 1 60 2.06e-22 87.4
MS.gene77573.t1 MTR_4g084740 57.143 70 30 0 1 70 1 70 3.01e-21 90.9
MS.gene77573.t1 MTR_3g102570 60.000 70 28 0 1 70 1 70 4.40e-21 90.5
MS.gene77573.t1 MTR_4g093030 61.667 60 23 0 1 60 1 60 4.39e-20 84.3
MS.gene77573.t1 MTR_2g461760 37.500 136 76 2 63 195 1 130 9.18e-19 81.3
MS.gene77573.t1 MTR_2g461760 37.500 136 76 2 63 195 1 130 9.39e-19 81.3
MS.gene77573.t1 MTR_1g041615 80.000 45 9 0 16 60 20 64 3.51e-18 78.6
MS.gene77573.t1 MTR_3g052920 44.330 97 51 1 2 95 9 105 2.63e-16 75.9
MS.gene77573.t1 MTR_2g030740 58.929 56 23 0 2 57 9 64 1.13e-15 74.3
MS.gene77573.t1 MTR_1g108580 57.143 56 24 0 2 57 9 64 3.49e-15 72.8
MS.gene77573.t1 MTR_1g108510 47.826 69 35 1 2 70 9 76 6.27e-15 72.0
MS.gene77573.t1 MTR_3g030770 55.357 56 25 0 2 57 9 64 6.72e-15 72.0
MS.gene77573.t1 MTR_8g086290 55.357 56 25 0 2 57 12 67 9.26e-15 70.5
MS.gene77573.t1 MTR_1g047550 40.816 98 53 1 1 93 1 98 1.00e-14 70.5
MS.gene77573.t1 MTR_8g079502 54.386 57 26 0 1 57 1 57 1.42e-14 70.1
MS.gene77573.t1 MTR_2g105290 56.140 57 25 0 1 57 11 67 1.42e-14 70.1
MS.gene77573.t1 MTR_8g051580 52.632 57 27 0 1 57 1 57 1.62e-14 70.1
MS.gene77573.t1 MTR_2g093190 53.571 56 26 0 2 57 9 64 1.91e-14 70.5
MS.gene77573.t1 MTR_8g043650 41.237 97 54 1 2 95 9 105 2.43e-14 70.5
MS.gene77573.t1 MTR_3g052870 41.237 97 54 1 2 95 9 105 2.69e-14 70.1
MS.gene77573.t1 MTR_1g105920 41.237 97 54 1 2 95 9 105 2.71e-14 70.5
MS.gene77573.t1 MTR_5g041650 31.522 184 96 7 1 158 38 217 4.83e-14 71.2
MS.gene77573.t1 MTR_1g105910 55.357 56 25 0 2 57 9 64 5.75e-14 69.3
MS.gene77573.t1 MTR_1g075600 47.826 69 35 1 2 70 9 76 5.80e-14 69.3
MS.gene77573.t1 MTR_1g012570 55.357 56 25 0 2 57 9 64 7.67e-14 69.3
MS.gene77573.t1 MTR_1g054265 52.632 57 27 0 1 57 1 57 8.19e-14 67.8
MS.gene77573.t1 MTR_1g077360 55.357 56 25 0 2 57 9 64 9.37e-14 68.9
MS.gene77573.t1 MTR_4g094632 47.541 61 32 0 1 61 1 61 1.29e-13 67.0
MS.gene77573.t1 MTR_5g045560 54.386 57 26 0 1 57 8 64 1.60e-13 68.2
MS.gene77573.t1 MTR_1g063160 50.877 57 28 0 1 57 1 57 2.08e-13 67.0
MS.gene77573.t1 MTR_0121s0100 51.786 56 27 0 2 57 9 64 2.10e-13 65.9
MS.gene77573.t1 MTR_4g131030 50.877 57 28 0 1 57 1 57 2.44e-13 67.4
MS.gene77573.t1 MTR_2g085280 46.377 69 36 1 2 70 9 76 3.38e-13 67.4
MS.gene77573.t1 MTR_2g085250 46.377 69 36 1 2 70 9 76 3.42e-13 67.4
MS.gene77573.t1 MTR_1g106070 39.175 97 56 1 2 95 9 105 7.10e-13 65.5
MS.gene77573.t1 MTR_5g055100 53.571 56 26 0 2 57 9 64 9.67e-13 66.2
MS.gene77573.t1 MTR_5g053390 53.571 56 26 0 2 57 9 64 1.06e-12 65.9
MS.gene77573.t1 MTR_4g108720 50.943 53 26 0 1 53 1 53 2.39e-12 66.2
MS.gene77573.t1 MTR_4g094638 45.763 59 32 0 1 59 1 59 2.92e-12 63.5
MS.gene77573.t1 MTR_7g028448 42.105 95 33 3 16 106 26 102 3.42e-12 63.2
MS.gene77573.t1 MTR_4g036915 42.105 95 33 3 16 106 26 102 3.42e-12 63.2
MS.gene77573.t1 MTR_0121s0080 40.449 89 47 3 2 88 7 91 7.09e-12 63.5
MS.gene77573.t1 MTR_3g080940 47.368 57 30 0 1 57 8 64 1.38e-11 62.4
MS.gene77573.t1 MTR_8g046350 47.368 57 30 0 1 57 1 57 1.43e-11 61.6
MS.gene77573.t1 MTR_3g030780 48.214 56 29 0 2 57 9 64 2.29e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene77573.t1 AT1G24260 75.403 248 56 4 1 246 1 245 2.51e-126 358
MS.gene77573.t1 AT1G24260 75.403 248 55 5 1 246 1 244 2.66e-124 353
MS.gene77573.t1 AT1G24260 72.874 247 50 4 1 246 1 231 1.97e-118 338
MS.gene77573.t1 AT3G02310 63.281 256 76 7 1 245 1 249 5.81e-100 291
MS.gene77573.t1 AT5G15800 61.479 257 80 6 1 245 1 250 1.55e-98 288
MS.gene77573.t1 AT5G15800 65.789 228 64 5 1 221 1 221 4.62e-96 282
MS.gene77573.t1 AT3G02310 80.117 171 31 2 1 171 1 168 3.09e-90 265
MS.gene77573.t1 AT2G03710 48.106 264 111 7 1 245 1 257 3.92e-73 224
MS.gene77573.t1 AT2G03710 48.289 263 111 7 1 245 1 256 3.93e-73 223
MS.gene77573.t1 AT2G03710 61.364 176 63 2 1 175 1 172 6.68e-70 213
MS.gene77573.t1 AT2G45650 47.082 257 118 8 1 245 1 251 2.51e-65 203
MS.gene77573.t1 AT1G26310 43.939 264 117 7 1 244 1 253 2.51e-58 186
MS.gene77573.t1 AT1G69120 51.381 181 75 2 1 176 1 173 3.28e-57 182
MS.gene77573.t1 AT1G69120 51.381 181 75 2 1 176 1 173 2.61e-56 181
MS.gene77573.t1 AT5G60910 52.514 179 76 2 1 176 1 173 6.56e-55 176
MS.gene77573.t1 AT3G61120 52.717 184 81 2 1 184 1 178 1.20e-54 176
MS.gene77573.t1 AT4G18960 46.561 189 91 3 2 187 18 199 3.80e-47 157
MS.gene77573.t1 AT4G09960 46.486 185 86 4 1 179 1 178 2.50e-46 154
MS.gene77573.t1 AT4G09960 46.486 185 86 4 1 179 2 179 2.72e-46 154
MS.gene77573.t1 AT4G09960 46.486 185 86 4 1 179 11 188 3.58e-46 154
MS.gene77573.t1 AT4G09960 46.486 185 86 4 1 179 27 204 1.51e-45 153
MS.gene77573.t1 AT4G09960 48.447 161 77 3 1 160 96 251 2.53e-43 149
MS.gene77573.t1 AT3G30260 50.633 158 69 2 1 155 1 152 2.65e-43 147
MS.gene77573.t1 AT3G58780 45.213 188 92 5 1 184 22 202 3.68e-43 147
MS.gene77573.t1 AT3G58780 45.213 188 92 5 1 184 16 196 3.72e-43 147
MS.gene77573.t1 AT4G09960 51.007 149 63 3 1 146 1 142 4.61e-43 145
MS.gene77573.t1 AT4G11880 49.123 171 69 3 1 165 1 159 2.04e-42 142
MS.gene77573.t1 AT4G11880 49.123 171 69 3 1 165 1 159 2.04e-42 142
MS.gene77573.t1 AT2G42830 44.199 181 85 3 1 175 16 186 6.34e-42 143
MS.gene77573.t1 AT2G45660 42.079 202 98 5 1 195 1 190 1.62e-41 141
MS.gene77573.t1 AT4G11880 51.282 156 60 2 1 150 1 146 4.38e-41 140
MS.gene77573.t1 AT4G11880 51.282 156 60 2 1 150 1 146 4.38e-41 140
MS.gene77573.t1 AT4G22950 45.810 179 86 4 1 176 1 171 7.27e-41 138
MS.gene77573.t1 AT4G22950 46.111 180 86 4 1 177 1 172 1.89e-40 139
MS.gene77573.t1 AT4G22950 46.111 180 86 4 1 177 1 172 1.89e-40 139
MS.gene77573.t1 AT2G42830 44.262 183 84 4 1 175 16 188 2.09e-40 139
MS.gene77573.t1 AT5G62165 45.402 174 91 3 1 174 1 170 3.37e-40 138
MS.gene77573.t1 AT5G62165 45.402 174 91 3 1 174 1 170 3.37e-40 138
MS.gene77573.t1 AT5G62165 45.402 174 91 3 1 174 1 170 3.37e-40 138
MS.gene77573.t1 AT3G58780 43.617 188 88 5 1 184 16 189 3.73e-40 139
MS.gene77573.t1 AT3G58780 36.398 261 123 8 1 226 16 268 2.24e-39 137
MS.gene77573.t1 AT2G45660 45.509 167 73 4 1 160 1 156 2.67e-39 134
MS.gene77573.t1 AT3G58780 49.351 154 68 4 1 151 16 162 7.35e-39 136
MS.gene77573.t1 AT3G57230 42.286 175 96 2 1 175 1 170 1.83e-38 134
MS.gene77573.t1 AT3G57230 42.286 175 96 2 1 175 1 170 1.83e-38 134
MS.gene77573.t1 AT5G62165 45.625 160 83 3 1 160 1 156 5.37e-38 130
MS.gene77573.t1 AT5G62165 45.625 160 83 3 1 160 1 156 5.37e-38 130
MS.gene77573.t1 AT5G62165 45.625 160 83 3 1 160 1 156 5.37e-38 130
MS.gene77573.t1 AT2G14210 36.017 236 134 3 1 223 1 232 1.88e-37 131
MS.gene77573.t1 AT2G14210 42.442 172 95 1 1 172 1 168 4.13e-37 130
MS.gene77573.t1 AT5G62165 40.816 196 109 5 1 195 1 190 7.01e-37 129
MS.gene77573.t1 AT5G62165 40.816 196 109 5 1 195 1 190 7.01e-37 129
MS.gene77573.t1 AT5G62165 45.333 150 78 3 1 150 1 146 3.00e-36 126
MS.gene77573.t1 AT5G62165 45.333 150 78 3 1 150 1 146 3.00e-36 126
MS.gene77573.t1 AT5G62165 45.333 150 78 3 1 150 1 146 3.00e-36 126
MS.gene77573.t1 AT5G62165 45.333 150 78 3 1 150 1 146 3.00e-36 126
MS.gene77573.t1 AT5G62165 45.333 150 78 3 1 150 1 146 3.00e-36 126
MS.gene77573.t1 AT3G57390 41.667 180 100 2 1 176 1 179 3.57e-36 128
MS.gene77573.t1 AT3G57390 41.667 180 100 2 1 176 1 179 8.89e-36 128
MS.gene77573.t1 AT3G57230 47.552 143 70 2 1 143 1 138 1.84e-35 124
MS.gene77573.t1 AT4G37940 39.344 183 92 3 1 176 1 171 2.82e-35 125
MS.gene77573.t1 AT2G22630 40.909 176 99 2 1 176 1 171 3.55e-35 125
MS.gene77573.t1 AT2G22630 40.909 176 99 2 1 176 1 171 3.55e-35 125
MS.gene77573.t1 AT5G13790 43.182 176 89 3 1 176 1 165 9.04e-35 125
MS.gene77573.t1 AT5G13790 44.318 176 90 3 1 176 1 168 1.09e-34 125
MS.gene77573.t1 AT5G51870 36.937 222 118 4 1 221 1 201 1.53e-33 120
MS.gene77573.t1 AT1G71692 37.879 198 119 2 1 194 1 198 2.70e-33 120
MS.gene77573.t1 AT2G22540 38.506 174 103 2 1 174 1 170 2.89e-33 120
MS.gene77573.t1 AT2G22540 38.506 174 103 2 1 174 1 170 2.89e-33 120
MS.gene77573.t1 AT4G37940 40.936 171 96 2 1 171 1 166 5.13e-33 119
MS.gene77573.t1 AT5G51860 41.463 164 93 2 1 164 1 161 1.44e-32 118
MS.gene77573.t1 AT5G51870 41.954 174 97 3 1 173 11 181 1.48e-32 119
MS.gene77573.t1 AT5G51870 41.954 174 97 3 1 173 1 171 1.64e-32 118
MS.gene77573.t1 AT5G51860 41.463 164 93 2 1 164 1 161 1.75e-32 118
MS.gene77573.t1 AT5G10140 41.875 160 82 1 1 160 1 149 1.82e-32 117
MS.gene77573.t1 AT5G23260 42.012 169 91 4 1 168 1 163 2.09e-32 119
MS.gene77573.t1 AT5G23260 42.012 169 91 4 1 168 17 179 3.28e-32 119
MS.gene77573.t1 AT5G10140 42.045 176 91 1 1 176 1 165 3.74e-32 117
MS.gene77573.t1 AT5G20240 35.556 225 113 7 1 219 1 199 5.11e-32 117
MS.gene77573.t1 AT4G37940 44.755 143 74 2 1 143 1 138 5.87e-32 115
MS.gene77573.t1 AT5G65050 40.698 172 89 3 1 171 1 160 6.10e-32 115
MS.gene77573.t1 AT5G65050 40.698 172 89 3 1 171 1 160 9.37e-32 115
MS.gene77573.t1 AT5G10140 43.046 151 75 1 1 151 1 140 1.29e-31 114
MS.gene77573.t1 AT5G10140 43.046 151 75 1 1 151 1 140 3.11e-31 114
MS.gene77573.t1 AT5G65060 38.953 172 92 3 1 171 1 160 7.02e-31 113
MS.gene77573.t1 AT5G65060 38.953 172 92 3 1 171 1 160 7.04e-31 113
MS.gene77573.t1 AT5G62165 59.783 92 32 2 1 88 1 91 2.17e-30 109
MS.gene77573.t1 AT5G65050 39.535 172 80 3 1 171 1 149 3.38e-30 111
MS.gene77573.t1 AT5G51870 42.568 148 82 2 1 148 1 145 4.38e-30 110
MS.gene77573.t1 AT5G51870 42.568 148 82 2 1 148 24 168 1.26e-29 110
MS.gene77573.t1 AT5G20240 42.568 148 68 4 1 143 1 136 1.37e-29 108
MS.gene77573.t1 AT5G65050 38.636 176 91 4 1 171 1 164 1.77e-29 109
MS.gene77573.t1 AT5G23260 41.420 169 87 5 1 168 17 174 3.89e-29 110
MS.gene77573.t1 AT5G65080 42.500 160 81 3 1 160 8 156 4.68e-29 108
MS.gene77573.t1 AT5G65060 37.791 172 83 3 1 171 1 149 6.75e-29 108
MS.gene77573.t1 AT5G65070 38.220 191 105 3 1 191 1 178 8.90e-29 108
MS.gene77573.t1 AT5G23260 39.264 163 92 4 1 162 1 157 5.13e-28 107
MS.gene77573.t1 AT2G22540 35.057 174 104 2 1 174 1 165 1.13e-27 106
MS.gene77573.t1 AT4G24540 33.628 226 134 5 1 221 1 215 4.86e-27 104
MS.gene77573.t1 AT5G65070 35.071 211 115 4 1 191 1 209 1.72e-26 103
MS.gene77573.t1 AT1G31140 42.405 158 72 5 1 150 1 147 7.13e-26 100
MS.gene77573.t1 AT1G31140 41.250 160 73 5 1 150 1 149 1.06e-25 100
MS.gene77573.t1 AT1G77080 39.205 176 94 3 1 175 1 164 2.87e-25 99.0
MS.gene77573.t1 AT3G54340 32.558 215 109 5 1 207 1 187 3.54e-25 99.8
MS.gene77573.t1 AT1G77080 38.251 183 100 3 1 182 1 171 6.19e-25 97.4
MS.gene77573.t1 AT1G77080 39.535 172 91 3 1 171 1 160 1.62e-24 96.3
MS.gene77573.t1 AT5G65070 61.972 71 27 0 1 71 1 71 5.91e-24 94.0
MS.gene77573.t1 AT5G65070 61.972 71 27 0 1 71 1 71 2.12e-23 94.4
MS.gene77573.t1 AT5G65080 37.342 158 87 2 1 158 8 153 6.53e-23 92.8
MS.gene77573.t1 AT5G65070 33.180 217 112 6 1 191 1 210 2.84e-22 92.0
MS.gene77573.t1 AT1G77080 34.500 200 97 4 1 175 1 191 6.04e-22 90.9
MS.gene77573.t1 AT1G77080 35.429 175 98 1 1 175 1 160 1.56e-20 86.3
MS.gene77573.t1 AT1G77980 55.714 70 31 0 1 70 1 70 2.28e-20 88.6
MS.gene77573.t1 AT1G22130 55.714 70 31 0 1 70 1 70 2.94e-20 88.6
MS.gene77573.t1 AT1G69120 38.136 118 60 2 63 175 1 110 4.82e-18 79.7
MS.gene77573.t1 AT1G77950 52.857 70 33 0 1 70 1 70 1.11e-17 80.1
MS.gene77573.t1 AT1G77950 52.857 70 33 0 1 70 1 70 1.11e-17 80.1
MS.gene77573.t1 AT1G77950 52.857 70 33 0 1 70 1 70 1.11e-17 80.1
MS.gene77573.t1 AT1G77950 52.857 70 33 0 1 70 1 70 1.11e-17 80.1
MS.gene77573.t1 AT1G77080 34.375 160 90 1 1 160 1 145 5.54e-17 75.9
MS.gene77573.t1 AT4G37435 59.649 57 23 0 1 57 1 57 2.75e-16 74.7
MS.gene77573.t1 AT5G60910 38.462 117 63 2 63 176 1 111 3.53e-16 74.3
MS.gene77573.t1 AT1G01530 57.895 57 24 0 1 57 6 62 2.41e-15 73.6
MS.gene77573.t1 AT2G03060 47.297 74 38 1 1 73 1 74 3.12e-15 74.7
MS.gene77573.t1 AT2G03060 47.297 74 38 1 1 73 1 74 3.12e-15 74.7
MS.gene77573.t1 AT2G03060 47.297 74 38 1 1 73 1 74 3.12e-15 74.7
MS.gene77573.t1 AT2G03060 47.297 74 38 1 1 73 1 74 3.61e-15 74.3
MS.gene77573.t1 AT4G36590 32.716 162 84 4 2 143 7 163 1.09e-14 71.6
MS.gene77573.t1 AT1G18750 52.632 57 27 0 1 57 1 57 3.10e-14 71.6
MS.gene77573.t1 AT1G18750 52.632 57 27 0 1 57 1 57 3.48e-14 71.6
MS.gene77573.t1 AT1G18750 52.632 57 27 0 1 57 1 57 4.39e-14 71.2
MS.gene77573.t1 AT1G72350 49.206 63 32 0 2 64 43 105 9.42e-14 68.6
MS.gene77573.t1 AT1G65360 33.333 114 75 1 1 114 6 118 9.50e-14 68.9
MS.gene77573.t1 AT3G66656 49.123 57 29 0 1 57 1 57 1.27e-12 64.7
MS.gene77573.t1 AT5G60440 53.571 56 26 0 2 57 7 62 1.80e-12 66.2
MS.gene77573.t1 AT2G24840 30.488 164 98 3 1 149 62 224 2.23e-12 65.5
MS.gene77573.t1 AT2G34440 47.368 57 30 0 1 57 1 57 2.27e-12 63.9
MS.gene77573.t1 AT1G69540 26.667 270 149 12 1 242 1 249 4.22e-12 65.5
MS.gene77573.t1 AT3G04100 38.961 77 46 1 2 78 14 89 5.23e-12 63.5
MS.gene77573.t1 AT1G69540 26.667 270 149 12 1 242 1 249 5.38e-12 65.1
MS.gene77573.t1 AT1G47760 53.061 49 23 0 1 49 1 49 1.57e-11 62.0
MS.gene77573.t1 AT4G18960 27.326 172 110 4 54 221 55 215 2.39e-11 62.4
MS.gene77573.t1 AT4G18960 27.326 172 110 4 54 221 55 215 2.39e-11 62.4
MS.gene77573.t1 AT4G18960 30.000 130 82 2 54 180 55 178 5.04e-11 60.5
MS.gene77573.t1 AT1G29962 50.000 60 30 0 2 61 8 67 5.73e-11 60.5

Find 60 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAAGCTTATGCAGATATC+AGG 0.292514 3.2:+73061950 MS.gene77573:intron
TCAAGATCTTTACTGCTTAG+AGG 0.314850 3.2:-73061257 None:intergenic
TGTGGATCTGATTTGCTTCA+AGG 0.316708 3.2:-73061306 None:intergenic
GAATCTGAGTGCTGAAGATA+TGG 0.338691 3.2:+73061752 MS.gene77573:CDS
AGTGCTGAAGATATGGGATA+TGG 0.360357 3.2:+73061759 MS.gene77573:CDS
CTAGCTGATCCAGCATGAAT+TGG 0.361524 3.2:-73061429 None:intergenic
TGCTCACTCAAAGGAAGCTT+TGG 0.364390 3.2:+73059938 MS.gene77573:CDS
CCCATGTAGTTATTCATGCT+TGG 0.364997 3.2:-73062005 None:intergenic
CCATGTAGTTATTCATGCTT+GGG 0.382911 3.2:-73062004 None:intergenic
TCATCATCCAGGTCAAAATC+AGG 0.389043 3.2:+73061785 MS.gene77573:CDS
GCTGTCACCACCACTGATCC+TGG 0.399437 3.2:-73061978 None:intergenic
GGCCAAGATCTTCTCCCATT+AGG 0.418705 3.2:-73061235 None:intergenic
CTTGTACATTAGGAACCTAA+TGG 0.419408 3.2:+73061220 MS.gene77573:intron
ACCTTTGCAAAACGAAGAAA+TGG 0.432131 3.2:+73058528 MS.gene77573:CDS
AGGTATCAGAAATGCAACTA+TGG 0.438111 3.2:+73059900 MS.gene77573:CDS
AACGTTGGTTCGCACTCGAT+TGG 0.443300 3.2:-73061828 None:intergenic
CTCAAAGGAAGCTTTGGTAT+TGG 0.446907 3.2:+73059944 MS.gene77573:CDS
TGCGAACCAACGTTACAAAT+CGG 0.451181 3.2:+73061837 MS.gene77573:CDS
GGATCAGTGGTGGTGACAGC+AGG 0.464006 3.2:+73061981 MS.gene77573:CDS
CAAACAGAGCTCTTAGACAA+AGG 0.465432 3.2:+73061582 MS.gene77573:CDS
AACCTAATGGGAGAAGATCT+TGG 0.476280 3.2:+73061233 MS.gene77573:CDS
GCAGGAATTAAGCAGCCAAC+AGG 0.478215 3.2:+73061067 MS.gene77573:intron
TGCAGATATCAGGCTGATCC+AGG 0.479365 3.2:+73061960 MS.gene77573:intron
AAAGATGGGAAGAGGAAGAG+TGG 0.480042 3.2:+73058467 None:intergenic
TTTGAGTGAGCATTAGCCTC+AGG 0.480988 3.2:-73059927 None:intergenic
AAGAGAAGAAAGATGGGAAG+AGG 0.486902 3.2:+73058459 None:intergenic
CAAGATCTTTACTGCTTAGA+GGG 0.491913 3.2:-73061256 None:intergenic
TTCTGTTCTTTGTGATGCAG+AGG 0.493852 3.2:+73058575 MS.gene77573:CDS
TAGCTGATCCAGCATGAATT+GGG 0.496848 3.2:-73061428 None:intergenic
CTCATCGTCTTCTCCAATAG+AGG 0.497888 3.2:+73058603 MS.gene77573:CDS
TTGTACATTAGGAACCTAAT+GGG 0.498132 3.2:+73061221 MS.gene77573:intron
GCGAACCAACGTTACAAATC+GGG 0.513223 3.2:+73061838 MS.gene77573:CDS
CCCAAGCATGAATAACTACA+TGG 0.518064 3.2:+73062004 MS.gene77573:CDS
TCAGCTTCAAGTATTCCTGT+TGG 0.519289 3.2:-73061082 None:intergenic
CTTCAGCACTCAGATTCAGT+TGG 0.523222 3.2:-73061746 None:intergenic
TCTATAGACCCAATTCATGC+TGG 0.526193 3.2:+73061420 MS.gene77573:intron
GGATATGGGCGTCATCATCC+AGG 0.528249 3.2:+73061774 MS.gene77573:CDS
AAACAGAGCTCTTAGACAAA+GGG 0.529334 3.2:+73061583 MS.gene77573:CDS
GCTAGGTGATCTTCAACGTA+AGG 0.552185 3.2:+73061447 MS.gene77573:CDS
TGAATAACTACATGGGTGGA+TGG 0.580988 3.2:+73062012 MS.gene77573:CDS
CAATTCATGCTGGATCAGCT+AGG 0.586915 3.2:+73061430 MS.gene77573:CDS
AAGATCTTGAAACACTTGAA+AGG 0.590834 3.2:+73061270 MS.gene77573:CDS
TGAGGCTAATGCTCACTCAA+AGG 0.602089 3.2:+73059929 MS.gene77573:CDS
ACCGACCCGATTTGTAACGT+TGG 0.607060 3.2:-73061843 None:intergenic
GCATGCTCAAAACGCTTGAG+AGG 0.610774 3.2:+73059880 MS.gene77573:intron
GTGCTGAAGATATGGGATAT+GGG 0.612448 3.2:+73061760 MS.gene77573:CDS
TGTAAAGTTGAGTACCCTTG+TGG 0.614190 3.2:-73061324 None:intergenic
CATCATCCAGGTCAAAATCA+GGG 0.621739 3.2:+73061786 MS.gene77573:CDS
AGCATGAATAACTACATGGG+TGG 0.631983 3.2:+73062008 MS.gene77573:CDS
TCAGGCTGATCCAGGATCAG+TGG 0.632515 3.2:+73061968 MS.gene77573:CDS
AATCTGAGTGCTGAAGATAT+GGG 0.638446 3.2:+73061753 MS.gene77573:CDS
GGCTGATCCAGGATCAGTGG+TGG 0.652694 3.2:+73061971 MS.gene77573:CDS
ATGCAACTATGGAGCACCTG+AGG 0.652818 3.2:+73059911 MS.gene77573:CDS
ACAGGAATACTTGAAGCTGA+AGG 0.654193 3.2:+73061085 MS.gene77573:CDS
GGATCTGATTTGCTTCAAGG+AGG 0.671453 3.2:-73061303 None:intergenic
CCAAGCATGAATAACTACAT+GGG 0.681040 3.2:+73062005 MS.gene77573:CDS
AATCTCTACAACGCACTCAG+AGG 0.684339 3.2:+73061117 MS.gene77573:CDS
TGAAGCAAATCAGATCCACA+AGG 0.704252 3.2:+73061309 MS.gene77573:CDS
GAAGCAAATCAGATCCACAA+GGG 0.737410 3.2:+73061310 MS.gene77573:CDS
GAAGGAACACTTGCTATGTG+AGG 0.772195 3.2:+73061559 MS.gene77573:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTAATTCTTATATAATTAA+AGG - chr3.2:73061019-73061038 None:intergenic 10.0%
!! AAAAAATGTATAGACAAAAA+AGG - chr3.2:73061356-73061375 None:intergenic 15.0%
!! AGTGAATATATTCATAATAT+TGG - chr3.2:73060913-73060932 None:intergenic 15.0%
!! ATACTATATATACATACATA+TGG + chr3.2:73061642-73061661 MS.gene77573:intron 15.0%
!! GAATAAAAATAGAAAAATGA+AGG + chr3.2:73060209-73060228 MS.gene77573:intron 15.0%
!!! ATTAAATTATGTCAAGTTTT+AGG + chr3.2:73059234-73059253 MS.gene77573:intron 15.0%
!!! TATAAATGTTTTGTTTGTTT+GGG - chr3.2:73058951-73058970 None:intergenic 15.0%
!!! TTATAAATGTTTTGTTTGTT+TGG - chr3.2:73058952-73058971 None:intergenic 15.0%
!! AACTAATTCTACAAGTAATT+AGG + chr3.2:73060248-73060267 MS.gene77573:intron 20.0%
!! ATTGAATATTGGATTGAATT+GGG - chr3.2:73060430-73060449 None:intergenic 20.0%
!! CTAAAGAAATATTAACACAT+TGG + chr3.2:73060591-73060610 MS.gene77573:intron 20.0%
!! GTTGATATAATAATATAGAG+GGG - chr3.2:73059524-73059543 None:intergenic 20.0%
!! TATTGAATATTGGATTGAAT+TGG - chr3.2:73060431-73060450 None:intergenic 20.0%
!!! AAAATTTTAATCAAGACAAG+AGG - chr3.2:73059469-73059488 None:intergenic 20.0%
!!! AAATTTTAATCAAGACAAGA+GGG - chr3.2:73059468-73059487 None:intergenic 20.0%
!!! AGAATGTTATTGATTAGAAT+TGG + chr3.2:73060372-73060391 MS.gene77573:intron 20.0%
!!! ATTGATAGTTGTTAATTTGT+TGG + chr3.2:73060090-73060109 MS.gene77573:intron 20.0%
!!! GAATATATTCACTAAGATTT+TGG + chr3.2:73060920-73060939 MS.gene77573:intron 20.0%
!!! GGTTGATATAATAATATAGA+GGG - chr3.2:73059525-73059544 None:intergenic 20.0%
!!! TATATCGTTTATTTTCTTGT+TGG - chr3.2:73060548-73060567 None:intergenic 20.0%
!!! TGAGTTTTGATATTGAATAT+TGG - chr3.2:73060441-73060460 None:intergenic 20.0%
!!! TGGTTGATATAATAATATAG+AGG - chr3.2:73059526-73059545 None:intergenic 20.0%
!!! TTTTGTTTTTGTTCTTGTTT+AGG + chr3.2:73060008-73060027 MS.gene77573:intron 20.0%
! AATAATATAGAGGGGAAAAA+AGG - chr3.2:73059516-73059535 None:intergenic 25.0%
! AATTCTACAAGTAATTAGGA+AGG + chr3.2:73060252-73060271 MS.gene77573:intron 25.0%
! ACAAAATTAATCGTTCCAAT+TGG + chr3.2:73060689-73060708 MS.gene77573:intron 25.0%
! AGAAAAATGAGACATGAATT+AGG - chr3.2:73059304-73059323 None:intergenic 25.0%
! ATGATAGCAAACATGATAAA+GGG - chr3.2:73061500-73061519 None:intergenic 25.0%
! ATGTAAAGTTAGGAGAAATA+AGG - chr3.2:73060820-73060839 None:intergenic 25.0%
! ATGTGAACAAGAAAAATGAA+TGG - chr3.2:73059546-73059565 None:intergenic 25.0%
! ATTCTACAAGTAATTAGGAA+GGG + chr3.2:73060253-73060272 MS.gene77573:intron 25.0%
! CTAAGACAAAATGTAAAGTT+AGG - chr3.2:73060830-73060849 None:intergenic 25.0%
! GAAAAGATTGTTAGAAAACA+AGG - chr3.2:73059428-73059447 None:intergenic 25.0%
! TATGATAGCAAACATGATAA+AGG - chr3.2:73061501-73061520 None:intergenic 25.0%
! TTAGAAGAATCATGATGAAA+AGG - chr3.2:73059606-73059625 None:intergenic 25.0%
! TTGAATATTGGATTGAATTG+GGG - chr3.2:73060429-73060448 None:intergenic 25.0%
! TTTATAACCTACACAAATGA+AGG + chr3.2:73060498-73060517 MS.gene77573:intron 25.0%
! TTTCCATTCAAATTTGTCAA+TGG - chr3.2:73060064-73060083 None:intergenic 25.0%
!!! AAGTATTTGACTTGTACATT+AGG + chr3.2:73061210-73061229 MS.gene77573:intron 25.0%
!!! ATATATGATCAAGTATCGAT+CGG - chr3.2:73061145-73061164 None:intergenic 25.0%
!!! TGTAATGTTTTTGTTTCAGA+TGG + chr3.2:73061701-73061720 MS.gene77573:intron 25.0%
!!! TGTCTATACATTTTTTGTCT+CGG + chr3.2:73061360-73061379 MS.gene77573:intron 25.0%
AAGATCTTGAAACACTTGAA+AGG + chr3.2:73061270-73061289 MS.gene77573:CDS 30.0%
ACAATATCCTTCATTTGTGT+AGG - chr3.2:73060508-73060527 None:intergenic 30.0%
AGAAAAGAAAAAGAAACCCT+AGG - chr3.2:73059378-73059397 None:intergenic 30.0%
ATTTCCAACAGTTTCATTTG+TGG + chr3.2:73059806-73059825 MS.gene77573:intron 30.0%
CAAATTACAAAGTGAACATG+AGG - chr3.2:73061526-73061545 None:intergenic 30.0%
CAAATTGCTGTGATCAAATT+AGG - chr3.2:73059987-73060006 None:intergenic 30.0%
CAATTGGATCAAATAGAAAG+TGG + chr3.2:73060705-73060724 MS.gene77573:intron 30.0%
CACATCAATCCAAAAATTTC+TGG + chr3.2:73059107-73059126 MS.gene77573:intron 30.0%
CACTTTCTATTTGATCCAAT+TGG - chr3.2:73060707-73060726 None:intergenic 30.0%
GTACAAGTCAAATACTTCAT+TGG - chr3.2:73061207-73061226 None:intergenic 30.0%
GTATACCTTCTTCATAGAAA+AGG - chr3.2:73060869-73060888 None:intergenic 30.0%
TAACATTCTTATTCTTGTCG+TGG - chr3.2:73060361-73060380 None:intergenic 30.0%
TCATAGAAAAGGTCAAATCT+AGG - chr3.2:73060858-73060877 None:intergenic 30.0%
TTGCCATTGACAAATTTGAA+TGG + chr3.2:73060058-73060077 MS.gene77573:intron 30.0%
TTGTACATTAGGAACCTAAT+GGG + chr3.2:73061221-73061240 MS.gene77573:intron 30.0%
TTTAAGCTTATGCAGATATC+AGG + chr3.2:73061950-73061969 MS.gene77573:intron 30.0%
! ACATATGGTGTTGAAATTTG+AGG + chr3.2:73061657-73061676 MS.gene77573:intron 30.0%
! GAAGCAAAACCAGAAATTTT+TGG - chr3.2:73059119-73059138 None:intergenic 30.0%
! TTTGACCTTTTCTATGAAGA+AGG + chr3.2:73060861-73060880 MS.gene77573:intron 30.0%
!! ATGTGTTGATAGCTAAAAGA+GGG - chr3.2:73059092-73059111 None:intergenic 30.0%
!! ATGTTTTTGTTTCAGATGGA+AGG + chr3.2:73061705-73061724 MS.gene77573:intron 30.0%
!! TGTTTTTGTTTCAGATGGAA+GGG + chr3.2:73061706-73061725 MS.gene77573:intron 30.0%
!!! ATGTGCTGAGTAACATTTTT+TGG + chr3.2:73061384-73061403 MS.gene77573:intron 30.0%
!!! GTTTTTTCTACCAAAAATGC+AGG + chr3.2:73061049-73061068 MS.gene77573:intron 30.0%
!!! TTTTGTTTTTCATGCCTTGT+AGG - chr3.2:73060675-73060694 None:intergenic 30.0%
AAAAGGACTCGCTATGTAAA+TGG + chr3.2:73060183-73060202 MS.gene77573:intron 35.0%
AAACAGAGCTCTTAGACAAA+GGG + chr3.2:73061583-73061602 MS.gene77573:CDS 35.0%
AAAGGCAAAAACTCAAACAG+TGG - chr3.2:73058844-73058863 None:intergenic 35.0%
AATGAAGCCTGAATTGCTTT+AGG - chr3.2:73059179-73059198 None:intergenic 35.0%
AATGTCTTGGCGTTTATAGA+AGG + chr3.2:73058870-73058889 MS.gene77573:intron 35.0%
ACCTTTGCAAAACGAAGAAA+TGG + chr3.2:73058528-73058547 MS.gene77573:CDS 35.0%
AGGAGGGATACAAAAAGATT+CGG - chr3.2:73060150-73060169 None:intergenic 35.0%
AGGTATCAGAAATGCAACTA+TGG + chr3.2:73059900-73059919 MS.gene77573:CDS 35.0%
ATGAACTAGAAGTTCGAATG+CGG + chr3.2:73060333-73060352 MS.gene77573:intron 35.0%
ATGAAGCCTGAATTGCTTTA+GGG - chr3.2:73059178-73059197 None:intergenic 35.0%
ATTGATGTTAGATCTGCATC+TGG + chr3.2:73058913-73058932 MS.gene77573:intron 35.0%
ATTTGCATCACTACTTGTGA+AGG + chr3.2:73061541-73061560 MS.gene77573:intron 35.0%
ATTTGTGTTACAAGCAGATC+TGG + chr3.2:73059139-73059158 MS.gene77573:intron 35.0%
CAAGATCTTTACTGCTTAGA+GGG - chr3.2:73061259-73061278 None:intergenic 35.0%
CCAAGCATGAATAACTACAT+GGG + chr3.2:73062005-73062024 MS.gene77573:CDS 35.0%
CCATGTAGTTATTCATGCTT+GGG - chr3.2:73062007-73062026 None:intergenic 35.0%
CTTGATTATGCATGTGTTGT+TGG - chr3.2:73060780-73060799 None:intergenic 35.0%
CTTGTACATTAGGAACCTAA+TGG + chr3.2:73061220-73061239 MS.gene77573:intron 35.0%
GAAAGAAAGTGAAAGCCAAA+GGG - chr3.2:73059070-73059089 None:intergenic 35.0%
TCAAGATCTTTACTGCTTAG+AGG - chr3.2:73061260-73061279 None:intergenic 35.0%
TGAACCACAAATGAAACTGT+TGG - chr3.2:73059813-73059832 None:intergenic 35.0%
TGTGTACCAAAACCAAACAA+TGG + chr3.2:73059704-73059723 MS.gene77573:intron 35.0%
TTCTTGTTGGACCTTATAGT+GGG - chr3.2:73060535-73060554 None:intergenic 35.0%
TTTCTTGTTGGACCTTATAG+TGG - chr3.2:73060536-73060555 None:intergenic 35.0%
! AAGCAATTCAGGCTTCATTT+TGG + chr3.2:73059180-73059199 MS.gene77573:intron 35.0%
! ACCATTTCTTCGTTTTGCAA+AGG - chr3.2:73058532-73058551 None:intergenic 35.0%
! CTCATAGAGTTTTCCTCTAT+TGG - chr3.2:73058619-73058638 None:intergenic 35.0%
! CTGCTTAATTCCTGCATTTT+TGG - chr3.2:73061062-73061081 None:intergenic 35.0%
! GTTTTTCCCTAAAGCAATTC+AGG + chr3.2:73059169-73059188 MS.gene77573:intron 35.0%
! TGTTTTATCTCTCTCTCTCT+TGG + chr3.2:73059653-73059672 MS.gene77573:intron 35.0%
! TTTACATAGCGAGTCCTTTT+TGG - chr3.2:73060183-73060202 None:intergenic 35.0%
!! AACACACCATTGTTTGGTTT+TGG - chr3.2:73059713-73059732 None:intergenic 35.0%
!! AATCTGAGTGCTGAAGATAT+GGG + chr3.2:73061753-73061772 MS.gene77573:CDS 35.0%
!! ACATCTTTTGAGTCTACCTA+GGG + chr3.2:73059359-73059378 MS.gene77573:intron 35.0%
!! AGTGTGTGTTAGCTTGTAAT+TGG - chr3.2:73059332-73059351 None:intergenic 35.0%
!! GATGTGTTGATAGCTAAAAG+AGG - chr3.2:73059093-73059112 None:intergenic 35.0%
!! TACATCTTTTGAGTCTACCT+AGG + chr3.2:73059358-73059377 MS.gene77573:intron 35.0%
!!! ATTTTGGTGCAATTTGGTGT+TGG + chr3.2:73059196-73059215 MS.gene77573:intron 35.0%
!!! TTTTGGTGCAATTTGGTGTT+GGG + chr3.2:73059197-73059216 MS.gene77573:intron 35.0%
AAAGTGAAAGCCAAAGGGTT+TGG - chr3.2:73059065-73059084 None:intergenic 40.0%
AACCTAATGGGAGAAGATCT+TGG + chr3.2:73061233-73061252 MS.gene77573:CDS 40.0%
AAGTGAAAGCCAAAGGGTTT+GGG - chr3.2:73059064-73059083 None:intergenic 40.0%
ACAGGAATACTTGAAGCTGA+AGG + chr3.2:73061085-73061104 MS.gene77573:CDS 40.0%
AGCATGAATAACTACATGGG+TGG + chr3.2:73062008-73062027 MS.gene77573:CDS 40.0%
AGTGAGGTAGCTCATTTATG+AGG - chr3.2:73059766-73059785 None:intergenic 40.0%
ATATTGTCCACCCCACTATA+AGG + chr3.2:73060521-73060540 MS.gene77573:intron 40.0%
CAAACAGAGCTCTTAGACAA+AGG + chr3.2:73061582-73061601 MS.gene77573:CDS 40.0%
CAAATCCACAAGTAGATCCA+TGG - chr3.2:73059736-73059755 None:intergenic 40.0%
CATCATCCAGGTCAAAATCA+GGG + chr3.2:73061786-73061805 MS.gene77573:CDS 40.0%
CCCAAGCATGAATAACTACA+TGG + chr3.2:73062004-73062023 MS.gene77573:CDS 40.0%
CCCATGTAGTTATTCATGCT+TGG - chr3.2:73062008-73062027 None:intergenic 40.0%
GAAGCAAATCAGATCCACAA+GGG + chr3.2:73061310-73061329 MS.gene77573:CDS 40.0%
GAGGGGAAAAAAGGAATCTA+TGG - chr3.2:73059507-73059526 None:intergenic 40.0%
GCAAATTTCTACCACTAGTG+AGG - chr3.2:73059782-73059801 None:intergenic 40.0%
GGAAAGAAAGTGAAAGCCAA+AGG - chr3.2:73059071-73059090 None:intergenic 40.0%
GTGCTGAAGATATGGGATAT+GGG + chr3.2:73061760-73061779 MS.gene77573:CDS 40.0%
TAAATGAGCTACCTCACTAG+TGG + chr3.2:73059768-73059787 MS.gene77573:intron 40.0%
TAGCTGATCCAGCATGAATT+GGG - chr3.2:73061431-73061450 None:intergenic 40.0%
TCAGCTTCAAGTATTCCTGT+TGG - chr3.2:73061085-73061104 None:intergenic 40.0%
TCATCATCCAGGTCAAAATC+AGG + chr3.2:73061785-73061804 MS.gene77573:CDS 40.0%
TCTATAGACCCAATTCATGC+TGG + chr3.2:73061420-73061439 MS.gene77573:intron 40.0%
TCTTGTTGGACCTTATAGTG+GGG - chr3.2:73060534-73060553 None:intergenic 40.0%
TGAAGCAAATCAGATCCACA+AGG + chr3.2:73061309-73061328 MS.gene77573:CDS 40.0%
TGAATAACTACATGGGTGGA+TGG + chr3.2:73062012-73062031 MS.gene77573:CDS 40.0%
TGCGAACCAACGTTACAAAT+CGG + chr3.2:73061837-73061856 MS.gene77573:CDS 40.0%
TGTAAAGTTGAGTACCCTTG+TGG - chr3.2:73061327-73061346 None:intergenic 40.0%
TTCTGTTCTTTGTGATGCAG+AGG + chr3.2:73058575-73058594 MS.gene77573:CDS 40.0%
! AGTGCTGAAGATATGGGATA+TGG + chr3.2:73061759-73061778 MS.gene77573:CDS 40.0%
! ATGAGTTTTGCAGCACTTCA+AGG + chr3.2:73058634-73058653 MS.gene77573:CDS 40.0%
! CTCAAAGGAAGCTTTGGTAT+TGG + chr3.2:73059944-73059963 MS.gene77573:CDS 40.0%
! GGTGTTGAAATTTGAGGAGT+TGG + chr3.2:73061663-73061682 MS.gene77573:intron 40.0%
! GTTTTGCTTCTCAAGGTTCT+TGG - chr3.2:73060403-73060422 None:intergenic 40.0%
! TGAAGAGAGAGAGCATAATG+AGG - chr3.2:73060618-73060637 None:intergenic 40.0%
! TGCCTTTTGTGTGAATGTCT+TGG + chr3.2:73058857-73058876 MS.gene77573:intron 40.0%
!! GAATCTGAGTGCTGAAGATA+TGG + chr3.2:73061752-73061771 MS.gene77573:CDS 40.0%
!! GGCTTCATTTTGGTGCAATT+TGG + chr3.2:73059190-73059209 MS.gene77573:intron 40.0%
!! TGTGGATCTGATTTGCTTCA+AGG - chr3.2:73061309-73061328 None:intergenic 40.0%
!! TTGTTTTTCCCCAAACCCTT+TGG + chr3.2:73059052-73059071 MS.gene77573:intron 40.0%
AATCTCTACAACGCACTCAG+AGG + chr3.2:73061117-73061136 MS.gene77573:CDS 45.0%
ACCAACGTTACAAATCGGGT+CGG + chr3.2:73061842-73061861 MS.gene77573:intron 45.0%
AGTGAAAGCCAAAGGGTTTG+GGG - chr3.2:73059063-73059082 None:intergenic 45.0%
CAATTCATGCTGGATCAGCT+AGG + chr3.2:73061430-73061449 MS.gene77573:CDS 45.0%
CCAAACAATGGTGTGTTCCA+TGG + chr3.2:73059716-73059735 MS.gene77573:intron 45.0%
CCATGGAACACACCATTGTT+TGG - chr3.2:73059719-73059738 None:intergenic 45.0%
CGCCAAGACATTCACACAAA+AGG - chr3.2:73058862-73058881 None:intergenic 45.0%
CTAGCTGATCCAGCATGAAT+TGG - chr3.2:73061432-73061451 None:intergenic 45.0%
CTCATCGTCTTCTCCAATAG+AGG + chr3.2:73058603-73058622 MS.gene77573:CDS 45.0%
CTTCAGCACTCAGATTCAGT+TGG - chr3.2:73061749-73061768 None:intergenic 45.0%
GCGAACCAACGTTACAAATC+GGG + chr3.2:73061838-73061857 MS.gene77573:CDS 45.0%
GCTAGGTGATCTTCAACGTA+AGG + chr3.2:73061447-73061466 MS.gene77573:CDS 45.0%
GTGTTCCATGGATCTACTTG+TGG + chr3.2:73059728-73059747 MS.gene77573:intron 45.0%
TAACGCCAACATAGCCTACA+AGG + chr3.2:73060658-73060677 MS.gene77573:intron 45.0%
TCATGCCTTGTAGGCTATGT+TGG - chr3.2:73060666-73060685 None:intergenic 45.0%
TGAGGCTAATGCTCACTCAA+AGG + chr3.2:73059929-73059948 MS.gene77573:CDS 45.0%
TGCTCACTCAAAGGAAGCTT+TGG + chr3.2:73059938-73059957 MS.gene77573:CDS 45.0%
! TCTTTTTGTATCCCTCCTCG+AGG + chr3.2:73060152-73060171 MS.gene77573:intron 45.0%
! TTTGAGTGAGCATTAGCCTC+AGG - chr3.2:73059930-73059949 None:intergenic 45.0%
!! GAAGGAACACTTGCTATGTG+AGG + chr3.2:73061559-73061578 MS.gene77573:intron 45.0%
!! GCAAGTACTGTGTCTGCTTT+TGG + chr3.2:73059258-73059277 MS.gene77573:intron 45.0%
!! GGATCTGATTTGCTTCAAGG+AGG - chr3.2:73061306-73061325 None:intergenic 45.0%
!! TGATCACCCTGATTTTGACC+TGG - chr3.2:73061795-73061814 None:intergenic 45.0%
!!! GGGGTTAGTTTTGCTTCTCA+AGG - chr3.2:73060410-73060429 None:intergenic 45.0%
GCAGGAATTAAGCAGCCAAC+AGG + chr3.2:73061067-73061086 MS.gene77573:intron 50.0%
GCATGCTCAAAACGCTTGAG+AGG + chr3.2:73059880-73059899 MS.gene77573:intron 50.0%
GGCCAAGATCTTCTCCCATT+AGG - chr3.2:73061238-73061257 None:intergenic 50.0%
TCCTCGAGGTGGATCCAAAA+AGG + chr3.2:73060166-73060185 MS.gene77573:intron 50.0%
TGCAGATATCAGGCTGATCC+AGG + chr3.2:73061960-73061979 MS.gene77573:intron 50.0%
! ACCGACCCGATTTGTAACGT+TGG - chr3.2:73061846-73061865 None:intergenic 50.0%
! ATGCAACTATGGAGCACCTG+AGG + chr3.2:73059911-73059930 MS.gene77573:CDS 50.0%
! TCCTTTTTGGATCCACCTCG+AGG - chr3.2:73060170-73060189 None:intergenic 50.0%
! TGTTGGACCTTATAGTGGGG+TGG - chr3.2:73060531-73060550 None:intergenic 50.0%
! TTTTGGATCCACCTCGAGGA+GGG - chr3.2:73060166-73060185 None:intergenic 50.0%
! TTTTGTATCCCTCCTCGAGG+TGG + chr3.2:73060155-73060174 MS.gene77573:intron 50.0%
! TTTTTGGATCCACCTCGAGG+AGG - chr3.2:73060167-73060186 None:intergenic 50.0%
!! AACGTTGGTTCGCACTCGAT+TGG - chr3.2:73061831-73061850 None:intergenic 50.0%
GGATATGGGCGTCATCATCC+AGG + chr3.2:73061774-73061793 MS.gene77573:CDS 55.0%
TCAGGCTGATCCAGGATCAG+TGG + chr3.2:73061968-73061987 MS.gene77573:CDS 55.0%
GCTGTCACCACCACTGATCC+TGG - chr3.2:73061981-73062000 None:intergenic 60.0%
GGCTGATCCAGGATCAGTGG+TGG + chr3.2:73061971-73061990 MS.gene77573:CDS 60.0%
! GGATCAGTGGTGGTGACAGC+AGG + chr3.2:73061981-73062000 MS.gene77573:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 73058471 73062043 73058471 ID=MS.gene77573
chr3.2 mRNA 73058471 73062043 73058471 ID=MS.gene77573.t1;Parent=MS.gene77573
chr3.2 exon 73058471 73058655 73058471 ID=MS.gene77573.t1.exon1;Parent=MS.gene77573.t1
chr3.2 CDS 73058471 73058655 73058471 ID=cds.MS.gene77573.t1;Parent=MS.gene77573.t1
chr3.2 exon 73059881 73059965 73059881 ID=MS.gene77573.t1.exon2;Parent=MS.gene77573.t1
chr3.2 CDS 73059881 73059965 73059881 ID=cds.MS.gene77573.t1;Parent=MS.gene77573.t1
chr3.2 exon 73061071 73061138 73061071 ID=MS.gene77573.t1.exon3;Parent=MS.gene77573.t1
chr3.2 CDS 73061071 73061138 73061071 ID=cds.MS.gene77573.t1;Parent=MS.gene77573.t1
chr3.2 exon 73061232 73061331 73061232 ID=MS.gene77573.t1.exon4;Parent=MS.gene77573.t1
chr3.2 CDS 73061232 73061331 73061232 ID=cds.MS.gene77573.t1;Parent=MS.gene77573.t1
chr3.2 exon 73061427 73061468 73061427 ID=MS.gene77573.t1.exon5;Parent=MS.gene77573.t1
chr3.2 CDS 73061427 73061468 73061427 ID=cds.MS.gene77573.t1;Parent=MS.gene77573.t1
chr3.2 exon 73061563 73061604 73061563 ID=MS.gene77573.t1.exon6;Parent=MS.gene77573.t1
chr3.2 CDS 73061563 73061604 73061563 ID=cds.MS.gene77573.t1;Parent=MS.gene77573.t1
chr3.2 exon 73061720 73061859 73061720 ID=MS.gene77573.t1.exon7;Parent=MS.gene77573.t1
chr3.2 CDS 73061720 73061859 73061720 ID=cds.MS.gene77573.t1;Parent=MS.gene77573.t1
chr3.2 exon 73061965 73062043 73061965 ID=MS.gene77573.t1.exon8;Parent=MS.gene77573.t1
chr3.2 CDS 73061965 73062043 73061965 ID=cds.MS.gene77573.t1;Parent=MS.gene77573.t1
Gene Sequence

>MS.gene77573

ATGGGAAGAGGAAGAGTGGAGTTGAAGAGAATTGAGAACAAGATCAACAGACAAGTTACCTTTGCAAAACGAAGAAATGGTCTTTTGAAAAAAGCTTATGAGCTTTCTGTTCTTTGTGATGCAGAGGTTGCTCTCATCGTCTTCTCCAATAGAGGAAAACTCTATGAGTTTTGCAGCACTTCAAGGTATAATAAATACATATTCATTCAAATGAGAATGATTAATAATTAAATATCAAACAAATATTGACTCTAACTCTACATAGTTAAAGAACATTAATAAACATCTCTACTAAATGCTTTTGATTCTTGTTACAAAATTTGTTTATCTATTTTGTTGTTTATTATATGAAAAAACTGATTTTCTTTTTCCACTGTTTGAGTTTTTGCCTTTTGTGTGAATGTCTTGGCGTTTATAGAAGGTTGAGTATTTCTGTGAATGCATTGATGTTAGATCTGCATCTGGAAAAACAATTAACCCAAACAAACAAAACATTTATAATATAAAAAAACAAGAAACAACACTGTTGTATTGTATATTCTATCTTGAAGTGTTCGTTTTTTTTCTCTTGTTCTCTAATTTTGTTTTTCCCCAAACCCTTTGGCTTTCACTTTCTTTCCCTCTTTTAGCTATCAACACATCAATCCAAAAATTTCTGGTTTTGCTTCATTTGTGTTACAAGCAGATCTGGTTCAAAAGTTTTTCCCTAAAGCAATTCAGGCTTCATTTTGGTGCAATTTGGTGTTGGGAACATAAACATATCATTAAATTATGTCAAGTTTTAGGAGCAAGTACTGTGTCTGCTTTTGGCTTTAGAAACACTCAGACAACCTAATTCATGTCTCATTTTTCTTTCATCCAATTACAAGCTAACACACACTCTCTTTTACATCTTTTGAGTCTACCTAGGGTTTCTTTTTCTTTTCTTTTCTTTTGTTTCTACAATTAGTTCTTCCTTGTTTTCTAACAATCTTTTCATTTCTTTCTTCTCTTGCCCTCTTGTCTTGATTAAAATTTTCTCTTTTTCAATCTTCCATAGATTCCTTTTTTCCCCTCTATATTATTATATCAACCATTCATTTTTCTTGTTCACATGACTTTATTGAGATTGAGAGTAGATGTTTGATGTTTTCCTTTTCATCATGATTCTTCTAAAGCTATTTACTTATGTAGAGTGTAGAGTGTTTTATCTCTCTCTCTCTTGGAAAACATCTAAGATCTTAAAGATCTAATTGTGTACCAAAACCAAACAATGGTGTGTTCCATGGATCTACTTGTGGATTTGAAAAGTGCCTCATAAATGAGCTACCTCACTAGTGGTAGAAATTTGCATCAATTTCCAACAGTTTCATTTGTGGTTCATTTGATTTTCTGAATGTTTATATATATTATTTTAATGTGAACATGCAGCATGCTCAAAACGCTTGAGAGGTATCAGAAATGCAACTATGGAGCACCTGAGGCTAATGCTCACTCAAAGGAAGCTTTGGTATTGGTGAATAATCTAACTTTGCCTAATTTGATCACAGCAATTTGTTTTTGTTTTTGTTCTTGTTTAGGTTTAGCGTGTTGAATTATAAAACAGTTTTGCCATTGACAAATTTGAATGGAAAATGTTAATTGATAGTTGTTAATTTGTTGGTTAAGAGAGTCAAACTCATGTCGTCTTCATCACTCCGAATCTTTTTGTATCCCTCCTCGAGGTGGATCCAAAAAGGACTCGCTATGTAAATGGCTTGAATAAAAATAGAAAAATGAAGGAACATCTAAGAAAAAAAACTAATTCTACAAGTAATTAGGAAGGGAAAAGAAACATAGAGAGAATGAGATGAGAAGTGAAAAGAACGATCTTCGCATTTATAATGAACTAGAAGTTCGAATGCGGATCCACGACAAGAATAAGAATGTTATTGATTAGAATTGGTTTATCCAAGAACCTTGAGAAGCAAAACTAACCCCAATTCAATCCAATATTCAATATCAAAACTCATGCATTAATTAAATGAAAAATTATCACAACATTATTATTTATAACCTACACAAATGAAGGATATTGTCCACCCCACTATAAGGTCCAACAAGAAAATAAACGATATAAACATTAATACAATTAAAATTCACTAAAGAAATATTAACACATTGGTCCTCATTATGCTCTCTCTCTTCAAGAGAATTTGTCATCAAATTTAACGCCAACATAGCCTACAAGGCATGAAAAACAAAATTAATCGTTCCAATTGGATCAAATAGAAAGTGGTAAATCAGAAAATATAATAAGTAGTTGAATTATAATAGTCTCTTTTCTACCAACAACACATGCATAATCAAGATAAAAACACAAAGTCACCTTATTTCTCCTAACTTTACATTTTGTCTTAGTTTATCCTAGATTTGACCTTTTCTATGAAGAAGGTATACACGTATTATCAATTGATAGTGCCAATATTATGAATATATTCACTAAGATTTTGGACATTTACGATGAATATGCATTGATGATATGTTTTTGATACAGTAGACAAAAATTTATAACTTCAAATATCTACCTTTAATTATATAAGAATTAGTAAGATGCAACGTTTTTTCTACCAAAAATGCAGGAATTAAGCAGCCAACAGGAATACTTGAAGCTGAAGGCACGTTATGAATCTCTACAACGCACTCAGAGGTACCGATCGATACTTGATCATATATACTTCTATAATCAAGTACATGATTGTAGAAATTAATGAGCCAATGAAGTATTTGACTTGTACATTAGGAACCTAATGGGAGAAGATCTTGGCCCTCTAAGCAGTAAAGATCTTGAAACACTTGAAAGGCAGCTAGATTCCTCCTTGAAGCAAATCAGATCCACAAGGGTACTCAACTTTACAACAATGCCTTTTTTGTCTATACATTTTTTGTCTCGGTATGTGCTGAGTAACATTTTTTGGAACTATTTTTTATTCTATAGACCCAATTCATGCTGGATCAGCTAGGTGATCTTCAACGTAAGGTATGATGAGAAAAATCTAGCTTTCTTTCCCTTTATCATGTTTGCTATCATATTCCTCATGTTCACTTTGTAATTTGCATCACTACTTGTGAAGGAACACTTGCTATGTGAGGCAAACAGAGCTCTTAGACAAAGGGTAACAATAAAAATTATCATGATAATTCAAGAACTATATACTATATATACATACATATGGTGTTGAAATTTGAGGAGTTGGTTAATGATAGTGATTTGTAATGTTTTTGTTTCAGATGGAAGGGTATCAAATAAATTCACTCCAACTGAATCTGAGTGCTGAAGATATGGGATATGGGCGTCATCATCCAGGTCAAAATCAGGGTGATCATGATGTATTTCAACCAATCGAGTGCGAACCAACGTTACAAATCGGGTCGGTGTTGTTTAGTACTCTTCATTCATTAAAAAATGAATCATATGTTTAAGATTTTAGCTGTATATTTTTGACATAGAATTTAATTTGTTTAAGCTTATGCAGATATCAGGCTGATCCAGGATCAGTGGTGGTGACAGCAGGCCCAAGCATGAATAACTACATGGGTGGATGGTTACCATGA
Protein sequence

>MS.gene77573.t1

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSSMLKTLERYQKCNYGAPEANAHSKEALVLELSSQQEYLKLKARYESLQRTQRNLMGEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQRMEGYQINSLQLNLSAEDMGYGRHHPGQNQGDHDVFQPIECEPTLQIGYQADPGSVVVTAGPSMNNYMGGWLP