Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77585.t1 | XP_003601767.2 | 91.9 | 458 | 13 | 1 | 1 | 458 | 1 | 434 | 5.80E-225 | 790 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77585.t1 | A2YGR5 | 40.3 | 422 | 197 | 10 | 1 | 390 | 6 | 404 | 2.3e-52 | 208.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77585.t1 | G7JBG3 | 91.9 | 458 | 13 | 1 | 1 | 458 | 1 | 434 | 4.2e-225 | 790.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene77585.t1 | TF | SBP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77585.t1 | MTR_3g085180 | 91.921 | 458 | 13 | 1 | 1 | 458 | 1 | 434 | 0.0 | 858 |
| MS.gene77585.t1 | MTR_8g080670 | 49.660 | 441 | 167 | 10 | 1 | 423 | 1 | 404 | 9.57e-108 | 325 |
| MS.gene77585.t1 | MTR_8g080680 | 45.671 | 462 | 173 | 9 | 1 | 449 | 1 | 397 | 3.15e-107 | 323 |
| MS.gene77585.t1 | MTR_8g080690 | 49.881 | 419 | 157 | 11 | 1 | 409 | 1 | 376 | 5.53e-104 | 314 |
| MS.gene77585.t1 | MTR_5g046670 | 41.827 | 208 | 112 | 4 | 39 | 240 | 115 | 319 | 1.36e-39 | 149 |
| MS.gene77585.t1 | MTR_7g092930 | 37.370 | 289 | 134 | 9 | 120 | 398 | 17 | 268 | 3.35e-38 | 142 |
| MS.gene77585.t1 | MTR_1g053715 | 35.616 | 292 | 139 | 7 | 115 | 392 | 18 | 274 | 3.39e-38 | 142 |
| MS.gene77585.t1 | MTR_7g444860 | 48.447 | 161 | 79 | 3 | 93 | 249 | 73 | 233 | 9.11e-38 | 140 |
| MS.gene77585.t1 | MTR_8g463140 | 68.293 | 82 | 26 | 0 | 163 | 244 | 63 | 144 | 9.56e-36 | 130 |
| MS.gene77585.t1 | MTR_3g099080 | 49.606 | 127 | 61 | 3 | 151 | 276 | 83 | 207 | 3.19e-35 | 135 |
| MS.gene77585.t1 | MTR_4g109770 | 50.781 | 128 | 56 | 2 | 117 | 240 | 74 | 198 | 5.83e-35 | 135 |
| MS.gene77585.t1 | MTR_2g078770 | 61.798 | 89 | 34 | 0 | 150 | 238 | 43 | 131 | 1.91e-34 | 127 |
| MS.gene77585.t1 | MTR_4g088555 | 55.963 | 109 | 32 | 1 | 130 | 238 | 44 | 136 | 2.27e-34 | 125 |
| MS.gene77585.t1 | MTR_8g005960 | 48.684 | 152 | 63 | 3 | 118 | 261 | 147 | 291 | 7.22e-34 | 130 |
| MS.gene77585.t1 | MTR_7g028740 | 59.341 | 91 | 34 | 1 | 154 | 244 | 69 | 156 | 1.67e-32 | 127 |
| MS.gene77585.t1 | MTR_8g096780 | 56.311 | 103 | 42 | 2 | 164 | 266 | 98 | 197 | 2.84e-32 | 127 |
| MS.gene77585.t1 | MTR_2g014200 | 57.895 | 95 | 39 | 1 | 148 | 242 | 48 | 141 | 5.97e-32 | 119 |
| MS.gene77585.t1 | MTR_2g461920 | 60.000 | 90 | 36 | 0 | 151 | 240 | 157 | 246 | 1.40e-30 | 124 |
| MS.gene77585.t1 | MTR_1g086250 | 56.842 | 95 | 41 | 0 | 150 | 244 | 132 | 226 | 4.23e-29 | 121 |
| MS.gene77585.t1 | MTR_2g046550 | 47.934 | 121 | 55 | 2 | 134 | 247 | 102 | 221 | 2.00e-28 | 119 |
| MS.gene77585.t1 | MTR_1g035010 | 58.621 | 87 | 36 | 0 | 163 | 249 | 102 | 188 | 3.19e-28 | 119 |
| MS.gene77585.t1 | MTR_7g110320 | 61.250 | 80 | 31 | 0 | 165 | 244 | 145 | 224 | 2.07e-26 | 113 |
| MS.gene77585.t1 | MTR_7g110320 | 61.250 | 80 | 31 | 0 | 165 | 244 | 145 | 224 | 2.92e-26 | 112 |
| MS.gene77585.t1 | MTR_2g020620 | 52.239 | 67 | 32 | 0 | 172 | 238 | 97 | 163 | 2.27e-16 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77585.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 2.24e-53 | 182 |
| MS.gene77585.t1 | AT5G43270 | 37.965 | 403 | 167 | 16 | 1 | 377 | 1 | 346 | 4.39e-53 | 184 |
| MS.gene77585.t1 | AT5G43270 | 37.965 | 403 | 167 | 16 | 1 | 377 | 1 | 346 | 4.39e-53 | 184 |
| MS.gene77585.t1 | AT5G43270 | 37.965 | 403 | 167 | 16 | 1 | 377 | 1 | 346 | 4.39e-53 | 184 |
| MS.gene77585.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 7.62e-53 | 182 |
| MS.gene77585.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 7.62e-53 | 182 |
| MS.gene77585.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 7.62e-53 | 182 |
| MS.gene77585.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 7.62e-53 | 182 |
| MS.gene77585.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 7.62e-53 | 182 |
| MS.gene77585.t1 | AT1G27370 | 47.674 | 258 | 110 | 7 | 1 | 240 | 1 | 251 | 7.62e-53 | 182 |
| MS.gene77585.t1 | AT1G27360 | 45.455 | 275 | 125 | 10 | 1 | 260 | 1 | 265 | 5.32e-51 | 177 |
| MS.gene77585.t1 | AT1G27360 | 45.455 | 275 | 125 | 10 | 1 | 260 | 1 | 265 | 5.32e-51 | 177 |
| MS.gene77585.t1 | AT1G27360 | 45.455 | 275 | 125 | 10 | 1 | 260 | 1 | 265 | 5.32e-51 | 177 |
| MS.gene77585.t1 | AT1G27360 | 45.455 | 275 | 125 | 10 | 1 | 260 | 1 | 265 | 5.32e-51 | 177 |
| MS.gene77585.t1 | AT2G42200 | 53.543 | 127 | 56 | 1 | 120 | 246 | 32 | 155 | 2.38e-35 | 135 |
| MS.gene77585.t1 | AT1G69170 | 66.304 | 92 | 31 | 0 | 148 | 239 | 107 | 198 | 2.59e-35 | 135 |
| MS.gene77585.t1 | AT3G57920 | 53.279 | 122 | 44 | 3 | 120 | 241 | 27 | 135 | 4.92e-34 | 131 |
| MS.gene77585.t1 | AT1G02065 | 53.279 | 122 | 49 | 2 | 118 | 238 | 147 | 261 | 9.27e-33 | 127 |
| MS.gene77585.t1 | AT5G50670 | 60.976 | 82 | 32 | 0 | 163 | 244 | 99 | 180 | 2.53e-31 | 124 |
| MS.gene77585.t1 | AT5G50670 | 60.976 | 82 | 32 | 0 | 163 | 244 | 99 | 180 | 2.53e-31 | 124 |
| MS.gene77585.t1 | AT5G50570 | 60.976 | 82 | 32 | 0 | 163 | 244 | 99 | 180 | 2.53e-31 | 124 |
| MS.gene77585.t1 | AT5G50570 | 60.976 | 82 | 32 | 0 | 163 | 244 | 99 | 180 | 2.53e-31 | 124 |
| MS.gene77585.t1 | AT2G33810 | 59.091 | 88 | 33 | 1 | 151 | 238 | 43 | 127 | 1.17e-30 | 115 |
| MS.gene77585.t1 | AT1G76580 | 60.674 | 89 | 35 | 0 | 163 | 251 | 112 | 200 | 3.30e-30 | 124 |
| MS.gene77585.t1 | AT1G76580 | 60.674 | 89 | 35 | 0 | 163 | 251 | 112 | 200 | 3.50e-30 | 124 |
| MS.gene77585.t1 | AT1G76580 | 60.674 | 89 | 35 | 0 | 163 | 251 | 112 | 200 | 6.66e-30 | 124 |
| MS.gene77585.t1 | AT3G60030 | 61.250 | 80 | 31 | 0 | 165 | 244 | 127 | 206 | 4.39e-29 | 121 |
| MS.gene77585.t1 | AT1G53160 | 59.494 | 79 | 32 | 0 | 165 | 243 | 54 | 132 | 1.23e-28 | 111 |
| MS.gene77585.t1 | AT2G47070 | 60.215 | 93 | 36 | 1 | 165 | 256 | 106 | 198 | 1.34e-28 | 119 |
| MS.gene77585.t1 | AT1G53160 | 45.385 | 130 | 56 | 4 | 165 | 288 | 54 | 174 | 1.91e-28 | 110 |
| MS.gene77585.t1 | AT1G53160 | 45.385 | 130 | 56 | 4 | 165 | 288 | 54 | 174 | 1.91e-28 | 110 |
| MS.gene77585.t1 | AT1G20980 | 60.000 | 95 | 37 | 1 | 151 | 244 | 106 | 200 | 4.23e-28 | 118 |
| MS.gene77585.t1 | AT3G15270 | 60.811 | 74 | 29 | 0 | 165 | 238 | 63 | 136 | 5.96e-28 | 109 |
| MS.gene77585.t1 | AT1G02065 | 46.875 | 96 | 43 | 2 | 118 | 212 | 147 | 235 | 6.41e-19 | 86.3 |
| MS.gene77585.t1 | AT5G18830 | 51.316 | 76 | 36 | 1 | 165 | 239 | 138 | 213 | 6.40e-18 | 87.0 |
| MS.gene77585.t1 | AT5G18830 | 51.316 | 76 | 36 | 1 | 165 | 239 | 138 | 213 | 6.41e-18 | 87.0 |
| MS.gene77585.t1 | AT5G18830 | 51.316 | 76 | 36 | 1 | 165 | 239 | 138 | 213 | 7.10e-18 | 87.0 |
| MS.gene77585.t1 | AT2G47070 | 60.294 | 68 | 26 | 1 | 190 | 256 | 2 | 69 | 2.37e-16 | 82.4 |
Find 119 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGATCAGACAAGGTATT+TGG | 0.193506 | 3.4:-79496782 | None:intergenic |
| GCTAAATTTGAAGTATTCTT+TGG | 0.209568 | 3.4:-79496409 | None:intergenic |
| TGCAGAGGAAGAGGCTTTCT+TGG | 0.222637 | 3.4:-79495446 | None:intergenic |
| AGCTTGCTGTTGGGCATGTC+TGG | 0.241731 | 3.4:-79496436 | None:intergenic |
| GGATTCAATTTCACTGCTTC+AGG | 0.274502 | 3.4:-79495868 | None:intergenic |
| GAGCATAAAATCTTTGGTTT+GGG | 0.292731 | 3.4:-79496461 | None:intergenic |
| TTTAGACGATTCTTTCTTAC+CGG | 0.323854 | 3.4:-79495326 | None:intergenic |
| TGAGCATAAAATCTTTGGTT+TGG | 0.329729 | 3.4:-79496462 | None:intergenic |
| TTAACATCTTGTGTAGCATT+TGG | 0.347549 | 3.4:-79496800 | None:intergenic |
| GCAAGGGAAACTTGACTCAT+AGG | 0.354069 | 3.4:-79497062 | None:intergenic |
| AATCTTGGTTCCTTTGCCTT+TGG | 0.356006 | 3.4:-79496551 | None:intergenic |
| TTGTGGCCTCGACCTCTCTT+TGG | 0.373974 | 3.4:+79495543 | MS.gene77585:CDS |
| CTCTTCTGTCAACCAATTCA+TGG | 0.377885 | 3.4:+79496834 | MS.gene77585:CDS |
| TACTACCACCACAGGCGATT+TGG | 0.381836 | 3.4:-79495608 | None:intergenic |
| TTCTTACCGGTGGAATTGTC+TGG | 0.385894 | 3.4:-79495313 | None:intergenic |
| ACATGCACCTGCTACATTGC+TGG | 0.389565 | 3.4:-79495654 | None:intergenic |
| ATTGATAGAATACATATTAC+AGG | 0.392874 | 3.4:+79496749 | MS.gene77585:CDS |
| AATCTCCCGGGCAATGGGAC+TGG | 0.397861 | 3.4:+79495053 | MS.gene77585:CDS |
| GCTGCTGGAGAAGTTTCAAT+TGG | 0.402606 | 3.4:-79495355 | None:intergenic |
| AGCTGCCAGGTGGAAGGTTG+TGG | 0.411491 | 3.4:+79495526 | MS.gene77585:CDS |
| ATCTCCCGGGCAATGGGACT+GGG | 0.414643 | 3.4:+79495054 | MS.gene77585:CDS |
| CAGCGCCTGTATCTCGTTCT+CGG | 0.419065 | 3.4:+79496991 | MS.gene77585:CDS |
| AATTTCACTGCTTCAGGCTG+AGG | 0.421915 | 3.4:-79495862 | None:intergenic |
| ACAATCTACTGATTGGAGTA+TGG | 0.424631 | 3.4:+79495123 | MS.gene77585:CDS |
| CGTGAAATCTCCCGGGCAAT+GGG | 0.426658 | 3.4:+79495048 | MS.gene77585:CDS |
| CAATATTCCAGTGACGAAAA+AGG | 0.427818 | 3.4:-79496941 | None:intergenic |
| GTGAGCAATGGTTCTGCTGC+TGG | 0.432022 | 3.4:-79495370 | None:intergenic |
| GTATTCTTTGGAAAAGCAAA+TGG | 0.434089 | 3.4:-79496397 | None:intergenic |
| ACAACCTGGGACAGCAATCT+TGG | 0.439368 | 3.4:-79496566 | None:intergenic |
| AAGTTTCCCTTGCAACCAGC+TGG | 0.440887 | 3.4:+79497072 | MS.gene77585:CDS |
| ATACACTCCAATCGGACAAC+CGG | 0.451604 | 3.4:+79496887 | MS.gene77585:CDS |
| TACTTTGAGGATGTTAGCAC+TGG | 0.451656 | 3.4:+79495415 | MS.gene77585:CDS |
| TCTTCTGTCAACCAATTCAT+GGG | 0.452114 | 3.4:+79496835 | MS.gene77585:CDS |
| CGAGATACAGGCGCTGGAGC+TGG | 0.455430 | 3.4:-79496984 | None:intergenic |
| CATCAAACTCTGAGAGATCA+TGG | 0.461380 | 3.4:-79495783 | None:intergenic |
| CAACCTTCCACCTGGCAGCT+TGG | 0.467365 | 3.4:-79495523 | None:intergenic |
| TCGCCTGTGGTGGTAGTAGC+TGG | 0.470263 | 3.4:+79495613 | MS.gene77585:CDS |
| GTTGGGATGTTGATTCCATC+TGG | 0.471449 | 3.4:+79495166 | MS.gene77585:CDS |
| CCTTTCTTTCCGCACAAAAG+AGG | 0.471950 | 3.4:-79495472 | None:intergenic |
| ACAGGTTACAATCTACTGAT+TGG | 0.476801 | 3.4:+79495116 | MS.gene77585:CDS |
| TGGTAAAAGATTCTACTTTG+AGG | 0.477123 | 3.4:+79495402 | MS.gene77585:CDS |
| AGGGGTGCCGGTTGTCCGAT+TGG | 0.477616 | 3.4:-79496894 | None:intergenic |
| TGTGGTGGTAGTAGCTGGTT+TGG | 0.481417 | 3.4:+79495618 | MS.gene77585:CDS |
| ACGTGAAATCTCCCGGGCAA+TGG | 0.485685 | 3.4:+79495047 | MS.gene77585:CDS |
| GAAGATCGAGAAATCAATGT+TGG | 0.486543 | 3.4:+79495148 | MS.gene77585:CDS |
| AAGAGGAACTGCAGAGGAAG+AGG | 0.487764 | 3.4:-79495455 | None:intergenic |
| ATCATATGGACCCCATGAAT+TGG | 0.492799 | 3.4:-79496846 | None:intergenic |
| TTGTCCGATTGGAGTGTATG+AGG | 0.494492 | 3.4:-79496883 | None:intergenic |
| AGCATACTCATTAATCCAGC+TGG | 0.497222 | 3.4:-79497087 | None:intergenic |
| GATTGGAGTGTATGAGGGAG+GGG | 0.501793 | 3.4:-79496877 | None:intergenic |
| CTTTGCCTTTGGATATAAAG+TGG | 0.501899 | 3.4:-79496540 | None:intergenic |
| GAGTGGAACGTGAAATCTCC+CGG | 0.503280 | 3.4:+79495040 | MS.gene77585:CDS |
| CATTAATCCAGCTGGTTGCA+AGG | 0.507260 | 3.4:-79497079 | None:intergenic |
| TTGATTCCATCTGGTGGTAG+TGG | 0.508737 | 3.4:+79495175 | MS.gene77585:CDS |
| AAGATCGAGAAATCAATGTT+GGG | 0.508795 | 3.4:+79495149 | MS.gene77585:CDS |
| CACAAATTCTATGTTTCCGA+TGG | 0.510237 | 3.4:-79495576 | None:intergenic |
| CAAGGGAAACTTGACTCATA+GGG | 0.517421 | 3.4:-79497061 | None:intergenic |
| CATGCTAAATCCAAGCTGCC+AGG | 0.528294 | 3.4:+79495513 | MS.gene77585:CDS |
| GTAACCCGAGAACGAGATAC+AGG | 0.528459 | 3.4:-79496996 | None:intergenic |
| CGATTGGAGTGTATGAGGGA+GGG | 0.531040 | 3.4:-79496878 | None:intergenic |
| TGCAGATGGGAGGCAGACAA+TGG | 0.534432 | 3.4:+79496372 | MS.gene77585:intron |
| CCTCCCTCATACACTCCAAT+CGG | 0.535964 | 3.4:+79496879 | MS.gene77585:CDS |
| TATTCTTTGGAAAAGCAAAT+GGG | 0.538218 | 3.4:-79496396 | None:intergenic |
| AGCGCCTGTATCTCGTTCTC+GGG | 0.540985 | 3.4:+79496992 | MS.gene77585:CDS |
| ACATCAATGTTAACTCAAGA+AGG | 0.548574 | 3.4:+79495286 | MS.gene77585:CDS |
| GGAACCAAGATTGCTGTCCC+AGG | 0.548599 | 3.4:+79496562 | MS.gene77585:CDS |
| GCAGATGGGAGGCAGACAAT+GGG | 0.549297 | 3.4:+79496373 | MS.gene77585:intron |
| CAAAAGCAGCAGAAACTCAC+AGG | 0.550624 | 3.4:+79495098 | MS.gene77585:CDS |
| GGTAAGAAAGAATCGTCTAA+AGG | 0.551763 | 3.4:+79495328 | MS.gene77585:CDS |
| TTGGCACACTGATCAACATC+AGG | 0.552387 | 3.4:+79496961 | MS.gene77585:CDS |
| TTTGGATATAAAGTGGCCAC+TGG | 0.552682 | 3.4:-79496533 | None:intergenic |
| AGTTGCATACTGAGGGGTGC+CGG | 0.554723 | 3.4:-79496906 | None:intergenic |
| CCAAGCTTTAGTGTGAGCAA+TGG | 0.557830 | 3.4:-79495382 | None:intergenic |
| GGGGACGAAGAGAGAGCTGA+TGG | 0.559258 | 3.4:-79495889 | None:intergenic |
| ATTGGAGTGTATGAGGGAGG+GGG | 0.561383 | 3.4:-79496876 | None:intergenic |
| AGAATACTTCAAATTTAGCA+TGG | 0.561391 | 3.4:+79496413 | MS.gene77585:CDS |
| GAATAATTCATCATCAAATG+AGG | 0.562543 | 3.4:+79495255 | MS.gene77585:CDS |
| ATTAATCCAGCTGGTTGCAA+GGG | 0.568989 | 3.4:-79497078 | None:intergenic |
| CGCTGAGCAGTTGCATACTG+AGG | 0.570454 | 3.4:-79496914 | None:intergenic |
| AATCCAAGCTGCCAGGTGGA+AGG | 0.571632 | 3.4:+79495520 | MS.gene77585:CDS |
| CTTTAGCCAAAGAGAGGTCG+AGG | 0.573405 | 3.4:-79495549 | None:intergenic |
| CGAGGCCACAACCTTCCACC+TGG | 0.580184 | 3.4:-79495531 | None:intergenic |
| CTTGAGATTTATACCATAGG+GGG | 0.580458 | 3.4:-79495908 | None:intergenic |
| AGACGATTCTTTCTTACCGG+TGG | 0.582162 | 3.4:-79495323 | None:intergenic |
| AGTGGCCACTTTATATCCAA+AGG | 0.587042 | 3.4:+79496535 | MS.gene77585:CDS |
| CCATTGCTCACACTAAAGCT+TGG | 0.588106 | 3.4:+79495382 | MS.gene77585:CDS |
| CTTTGGCTAAAGATTACCAT+CGG | 0.588534 | 3.4:+79495560 | MS.gene77585:CDS |
| TGTCCGATTGGAGTGTATGA+GGG | 0.588850 | 3.4:-79496882 | None:intergenic |
| GTCTTTCAGATCACAATGCA+AGG | 0.591028 | 3.4:+79495830 | MS.gene77585:CDS |
| GCATAAAATCTTTGGTTTGG+GGG | 0.594228 | 3.4:-79496459 | None:intergenic |
| GCTGAGCAGTTGCATACTGA+GGG | 0.602329 | 3.4:-79496913 | None:intergenic |
| TTGACAGAAGAGAGAGAGCA+CGG | 0.603893 | 3.4:-79496823 | None:intergenic |
| AGCATAAAATCTTTGGTTTG+GGG | 0.604215 | 3.4:-79496460 | None:intergenic |
| CCGATTGGAGTGTATGAGGG+AGG | 0.604444 | 3.4:-79496879 | None:intergenic |
| CACTTTATATCCAAAGGCAA+AGG | 0.613225 | 3.4:+79496541 | MS.gene77585:CDS |
| CGAGAACGAGATACAGGCGC+TGG | 0.614056 | 3.4:-79496990 | None:intergenic |
| AAACCAGCTACTACCACCAC+AGG | 0.617364 | 3.4:-79495616 | None:intergenic |
| TTGCATTGTGATCTGAAAGA+CGG | 0.621589 | 3.4:-79495828 | None:intergenic |
| TGTGAGGACTTGTCATGGAG+TGG | 0.623994 | 3.4:+79495023 | None:intergenic |
| GAATAGCCACTACCACCAGA+TGG | 0.631021 | 3.4:-79495181 | None:intergenic |
| TCATTCCAAATCGCCTGTGG+TGG | 0.632811 | 3.4:+79495603 | MS.gene77585:CDS |
| CTTCTGTCAACCAATTCATG+GGG | 0.634971 | 3.4:+79496836 | MS.gene77585:CDS |
| AGTGGAACGTGAAATCTCCC+GGG | 0.641060 | 3.4:+79495041 | MS.gene77585:CDS |
| ATCTACTGATTGGAGTATGG+AGG | 0.643141 | 3.4:+79495126 | MS.gene77585:CDS |
| TTGGAGTGTATGAGGGAGGG+GGG | 0.645515 | 3.4:-79496875 | None:intergenic |
| GGGATGTTGATTCCATCTGG+TGG | 0.647072 | 3.4:+79495169 | MS.gene77585:CDS |
| CAGTCATTCCAAATCGCCTG+TGG | 0.648152 | 3.4:+79495600 | MS.gene77585:CDS |
| TGTAGCATTTGGATCAGACA+AGG | 0.648361 | 3.4:-79496789 | None:intergenic |
| ATATTCATTCTGCAGATGGG+AGG | 0.649420 | 3.4:+79496362 | MS.gene77585:intron |
| GGTTCTCCAGACAATTCCAC+CGG | 0.652614 | 3.4:+79495307 | MS.gene77585:CDS |
| TCTTGAGATTTATACCATAG+GGG | 0.653113 | 3.4:-79495909 | None:intergenic |
| GGTAATCTTTAGCCAAAGAG+AGG | 0.662641 | 3.4:-79495555 | None:intergenic |
| CTGAGCAGTTGCATACTGAG+GGG | 0.662729 | 3.4:-79496912 | None:intergenic |
| GCTAAATCCAAGCTGCCAGG+TGG | 0.663879 | 3.4:+79495516 | MS.gene77585:CDS |
| ATGCTATCTGATGATTCCAG+TGG | 0.666446 | 3.4:+79496517 | MS.gene77585:CDS |
| TAATGCATGCTTCATCCTCG+AGG | 0.674783 | 3.4:+79495215 | MS.gene77585:CDS |
| GCACAAAAGAGGAACTGCAG+AGG | 0.694164 | 3.4:-79495461 | None:intergenic |
| TTAAGATTAGAGAACAACCT+GGG | 0.697431 | 3.4:-79496579 | None:intergenic |
| TTTAAGATTAGAGAACAACC+TGG | 0.701320 | 3.4:-79496580 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACACTTAATATTTTCTTATA+AGG | - | chr3.4:79496250-79496269 | None:intergenic | 15.0% |
| !!! | ATTAAATTTAGTTTGTTCAA+TGG | + | chr3.4:79496630-79496649 | MS.gene77585:intron | 15.0% |
| !!! | TTGGTTTGTTTAAAATAAAT+TGG | + | chr3.4:79495724-79495743 | MS.gene77585:intron | 15.0% |
| !! | ATTGATAGAATACATATTAC+AGG | + | chr3.4:79496749-79496768 | MS.gene77585:CDS | 20.0% |
| !! | TTATGAGAGAATTATAAGAA+TGG | + | chr3.4:79496030-79496049 | MS.gene77585:intron | 20.0% |
| !! | TTTAATAAGAAATCATGACT+CGG | - | chr3.4:79496616-79496635 | None:intergenic | 20.0% |
| !!! | AACTTAAACTATGATTTTGA+AGG | + | chr3.4:79495758-79495777 | MS.gene77585:intron | 20.0% |
| !!! | ATACTCTATGACTATATTTT+TGG | - | chr3.4:79496177-79496196 | None:intergenic | 20.0% |
| !!! | TACTCTATGACTATATTTTT+GGG | - | chr3.4:79496176-79496195 | None:intergenic | 20.0% |
| !!! | TTAGAATTTCTTTTGAGAAA+TGG | - | chr3.4:79496070-79496089 | None:intergenic | 20.0% |
| ! | AGAATACTTCAAATTTAGCA+TGG | + | chr3.4:79496413-79496432 | MS.gene77585:CDS | 25.0% |
| ! | ATTCTTGAGATTTATACCAT+AGG | - | chr3.4:79495914-79495933 | None:intergenic | 25.0% |
| ! | GAATAATTCATCATCAAATG+AGG | + | chr3.4:79495255-79495274 | MS.gene77585:CDS | 25.0% |
| ! | TTAATATTCATTCTGCAGAT+GGG | + | chr3.4:79496359-79496378 | MS.gene77585:intron | 25.0% |
| ! | TTCAGTTTCTTTGTAAGAAA+TGG | + | chr3.4:79496196-79496215 | MS.gene77585:intron | 25.0% |
| ! | TTCTTGAGATTTATACCATA+GGG | - | chr3.4:79495913-79495932 | None:intergenic | 25.0% |
| ! | TTTAAACAAACCAAAAAGAC+AGG | - | chr3.4:79495718-79495737 | None:intergenic | 25.0% |
| ! | TTTAATATTCATTCTGCAGA+TGG | + | chr3.4:79496358-79496377 | MS.gene77585:intron | 25.0% |
| !! | GCTAAATTTGAAGTATTCTT+TGG | - | chr3.4:79496412-79496431 | None:intergenic | 25.0% |
| !! | TATTCTTTGGAAAAGCAAAT+GGG | - | chr3.4:79496399-79496418 | None:intergenic | 25.0% |
| !!! | AGTTTTGAGCATAAAATCTT+TGG | - | chr3.4:79496470-79496489 | None:intergenic | 25.0% |
| !!! | TAACAGTTGTTTCTACAAAT+AGG | - | chr3.4:79496724-79496743 | None:intergenic | 25.0% |
| AAGATCGAGAAATCAATGTT+GGG | + | chr3.4:79495149-79495168 | MS.gene77585:CDS | 30.0% | |
| ACATCAATGTTAACTCAAGA+AGG | + | chr3.4:79495286-79495305 | MS.gene77585:CDS | 30.0% | |
| TAAACTAATGAAGCAAGACA+AGG | - | chr3.4:79495960-79495979 | None:intergenic | 30.0% | |
| TACAACCAATAGCATATCAA+TGG | - | chr3.4:79496096-79496115 | None:intergenic | 30.0% | |
| TCTTGAGATTTATACCATAG+GGG | - | chr3.4:79495912-79495931 | None:intergenic | 30.0% | |
| TGAAACATGCAATAAACTAG+AGG | - | chr3.4:79496682-79496701 | None:intergenic | 30.0% | |
| TGAATGGCGATATCTTAAAA+AGG | + | chr3.4:79496007-79496026 | MS.gene77585:intron | 30.0% | |
| TGAGCATAAAATCTTTGGTT+TGG | - | chr3.4:79496465-79496484 | None:intergenic | 30.0% | |
| TGGTAAAAGATTCTACTTTG+AGG | + | chr3.4:79495402-79495421 | MS.gene77585:CDS | 30.0% | |
| TTAACATCTTGTGTAGCATT+TGG | - | chr3.4:79496803-79496822 | None:intergenic | 30.0% | |
| TTAAGATTAGAGAACAACCT+GGG | - | chr3.4:79496582-79496601 | None:intergenic | 30.0% | |
| TTTAGACGATTCTTTCTTAC+CGG | - | chr3.4:79495329-79495348 | None:intergenic | 30.0% | |
| ! | AAGGCTAATTGATCTTTTAG+GGG | - | chr3.4:79495941-79495960 | None:intergenic | 30.0% |
| ! | ACAAGGCTAATTGATCTTTT+AGG | - | chr3.4:79495943-79495962 | None:intergenic | 30.0% |
| ! | ATATGCTATTGGTTGTATGA+AGG | + | chr3.4:79496099-79496118 | MS.gene77585:intron | 30.0% |
| ! | ATTGTCAATGTCATTTGCAT+TGG | - | chr3.4:79495689-79495708 | None:intergenic | 30.0% |
| ! | CAAGGCTAATTGATCTTTTA+GGG | - | chr3.4:79495942-79495961 | None:intergenic | 30.0% |
| ! | GAGCATAAAATCTTTGGTTT+GGG | - | chr3.4:79496464-79496483 | None:intergenic | 30.0% |
| ! | GTATTCTTTGGAAAAGCAAA+TGG | - | chr3.4:79496400-79496419 | None:intergenic | 30.0% |
| ! | TTTAAGATTAGAGAACAACC+TGG | - | chr3.4:79496583-79496602 | None:intergenic | 30.0% |
| !! | AGCATAAAATCTTTGGTTTG+GGG | - | chr3.4:79496463-79496482 | None:intergenic | 30.0% |
| !!! | ACAAACTTGCTGAAGTTTTT+TGG | - | chr3.4:79496493-79496512 | None:intergenic | 30.0% |
| AACCAATAGCATATCAATGG+AGG | - | chr3.4:79496093-79496112 | None:intergenic | 35.0% | |
| AACCTCCATTGATATGCTAT+TGG | + | chr3.4:79496088-79496107 | MS.gene77585:intron | 35.0% | |
| ACAGGTTACAATCTACTGAT+TGG | + | chr3.4:79495116-79495135 | MS.gene77585:CDS | 35.0% | |
| ATCCCAAACGAGAAACAAAA+TGG | - | chr3.4:79495988-79496007 | None:intergenic | 35.0% | |
| CAATATTCCAGTGACGAAAA+AGG | - | chr3.4:79496944-79496963 | None:intergenic | 35.0% | |
| CACAAATTCTATGTTTCCGA+TGG | - | chr3.4:79495579-79495598 | None:intergenic | 35.0% | |
| CACTTTATATCCAAAGGCAA+AGG | + | chr3.4:79496541-79496560 | MS.gene77585:CDS | 35.0% | |
| CTTGAGATTTATACCATAGG+GGG | - | chr3.4:79495911-79495930 | None:intergenic | 35.0% | |
| CTTTGCCTTTGGATATAAAG+TGG | - | chr3.4:79496543-79496562 | None:intergenic | 35.0% | |
| CTTTGGCTAAAGATTACCAT+CGG | + | chr3.4:79495560-79495579 | MS.gene77585:CDS | 35.0% | |
| GAAGATCGAGAAATCAATGT+TGG | + | chr3.4:79495148-79495167 | MS.gene77585:CDS | 35.0% | |
| GGTAAGAAAGAATCGTCTAA+AGG | + | chr3.4:79495328-79495347 | MS.gene77585:CDS | 35.0% | |
| TCTTCTGTCAACCAATTCAT+GGG | + | chr3.4:79496835-79496854 | MS.gene77585:CDS | 35.0% | |
| TTGCATTGTGATCTGAAAGA+CGG | - | chr3.4:79495831-79495850 | None:intergenic | 35.0% | |
| ! | AATAAGAAATCATGACTCGG+AGG | - | chr3.4:79496613-79496632 | None:intergenic | 35.0% |
| ! | ACAATCTACTGATTGGAGTA+TGG | + | chr3.4:79495123-79495142 | MS.gene77585:CDS | 35.0% |
| ! | TTTGGATCAGACAAGGTATT+TGG | - | chr3.4:79496785-79496804 | None:intergenic | 35.0% |
| !! | CAATTAGCTTCCTGTCTTTT+TGG | + | chr3.4:79495705-79495724 | MS.gene77585:intron | 35.0% |
| !! | CAGTTGTTTCTACAAATAGG+AGG | - | chr3.4:79496721-79496740 | None:intergenic | 35.0% |
| !! | CTAATTGATCTTTTAGGGGA+GGG | - | chr3.4:79495937-79495956 | None:intergenic | 35.0% |
| !! | CTTTTTCGTCACTGGAATAT+TGG | + | chr3.4:79496942-79496961 | MS.gene77585:CDS | 35.0% |
| !! | GCATAAAATCTTTGGTTTGG+GGG | - | chr3.4:79496462-79496481 | None:intergenic | 35.0% |
| !!! | TGCCATTTTGTTTCTCGTTT+GGG | + | chr3.4:79495983-79496002 | MS.gene77585:intron | 35.0% |
| !!! | TTGCCATTTTGTTTCTCGTT+TGG | + | chr3.4:79495982-79496001 | MS.gene77585:intron | 35.0% |
| AATCTTGGTTCCTTTGCCTT+TGG | - | chr3.4:79496554-79496573 | None:intergenic | 40.0% | |
| ATATTCATTCTGCAGATGGG+AGG | + | chr3.4:79496362-79496381 | MS.gene77585:intron | 40.0% | |
| ATCATATGGACCCCATGAAT+TGG | - | chr3.4:79496849-79496868 | None:intergenic | 40.0% | |
| ATGCTATCTGATGATTCCAG+TGG | + | chr3.4:79496517-79496536 | MS.gene77585:CDS | 40.0% | |
| CAAGGGAAACTTGACTCATA+GGG | - | chr3.4:79497064-79497083 | None:intergenic | 40.0% | |
| CTCTTCTGTCAACCAATTCA+TGG | + | chr3.4:79496834-79496853 | MS.gene77585:CDS | 40.0% | |
| CTTCTGTCAACCAATTCATG+GGG | + | chr3.4:79496836-79496855 | MS.gene77585:CDS | 40.0% | |
| GGATTCAATTTCACTGCTTC+AGG | - | chr3.4:79495871-79495890 | None:intergenic | 40.0% | |
| GGTAATCTTTAGCCAAAGAG+AGG | - | chr3.4:79495558-79495577 | None:intergenic | 40.0% | |
| GTCTTTCAGATCACAATGCA+AGG | + | chr3.4:79495830-79495849 | MS.gene77585:CDS | 40.0% | |
| TGTAGCATTTGGATCAGACA+AGG | - | chr3.4:79496792-79496811 | None:intergenic | 40.0% | |
| TTTGGATATAAAGTGGCCAC+TGG | - | chr3.4:79496536-79496555 | None:intergenic | 40.0% | |
| ! | AGTGGCCACTTTATATCCAA+AGG | + | chr3.4:79496535-79496554 | MS.gene77585:CDS | 40.0% |
| ! | ATCTACTGATTGGAGTATGG+AGG | + | chr3.4:79495126-79495145 | MS.gene77585:CDS | 40.0% |
| ! | CATCAAACTCTGAGAGATCA+TGG | - | chr3.4:79495786-79495805 | None:intergenic | 40.0% |
| ! | TACTTTGAGGATGTTAGCAC+TGG | + | chr3.4:79495415-79495434 | MS.gene77585:CDS | 40.0% |
| ! | TGTTTCTCGTTTGGGATGAA+TGG | + | chr3.4:79495991-79496010 | MS.gene77585:intron | 40.0% |
| !! | GCTAATTGATCTTTTAGGGG+AGG | - | chr3.4:79495938-79495957 | None:intergenic | 40.0% |
| AATTTCACTGCTTCAGGCTG+AGG | - | chr3.4:79495865-79495884 | None:intergenic | 45.0% | |
| AGACGATTCTTTCTTACCGG+TGG | - | chr3.4:79495326-79495345 | None:intergenic | 45.0% | |
| ATACACTCCAATCGGACAAC+CGG | + | chr3.4:79496887-79496906 | MS.gene77585:CDS | 45.0% | |
| CAAAAGCAGCAGAAACTCAC+AGG | + | chr3.4:79495098-79495117 | MS.gene77585:CDS | 45.0% | |
| CCATTGCTCACACTAAAGCT+TGG | + | chr3.4:79495382-79495401 | MS.gene77585:CDS | 45.0% | |
| CCTTTCTTTCCGCACAAAAG+AGG | - | chr3.4:79495475-79495494 | None:intergenic | 45.0% | |
| GCAAGGGAAACTTGACTCAT+AGG | - | chr3.4:79497065-79497084 | None:intergenic | 45.0% | |
| GCTGCTGGAGAAGTTTCAAT+TGG | - | chr3.4:79495358-79495377 | None:intergenic | 45.0% | |
| TAATGCATGCTTCATCCTCG+AGG | + | chr3.4:79495215-79495234 | MS.gene77585:CDS | 45.0% | |
| TGTCCGATTGGAGTGTATGA+GGG | - | chr3.4:79496885-79496904 | None:intergenic | 45.0% | |
| TTCTTACCGGTGGAATTGTC+TGG | - | chr3.4:79495316-79495335 | None:intergenic | 45.0% | |
| TTGACAGAAGAGAGAGAGCA+CGG | - | chr3.4:79496826-79496845 | None:intergenic | 45.0% | |
| TTGATTCCATCTGGTGGTAG+TGG | + | chr3.4:79495175-79495194 | MS.gene77585:CDS | 45.0% | |
| TTGGCACACTGATCAACATC+AGG | + | chr3.4:79496961-79496980 | MS.gene77585:CDS | 45.0% | |
| TTGTCCGATTGGAGTGTATG+AGG | - | chr3.4:79496886-79496905 | None:intergenic | 45.0% | |
| ! | CCAAGCTTTAGTGTGAGCAA+TGG | - | chr3.4:79495385-79495404 | None:intergenic | 45.0% |
| ! | CCTCTTTTGTGCGGAAAGAA+AGG | + | chr3.4:79495472-79495491 | MS.gene77585:CDS | 45.0% |
| ! | GATTTTGCCAGCAATGTAGC+AGG | + | chr3.4:79495647-79495666 | MS.gene77585:CDS | 45.0% |
| ! | TCTGCAGTTCCTCTTTTGTG+CGG | + | chr3.4:79495463-79495482 | MS.gene77585:CDS | 45.0% |
| !! | GTTGGGATGTTGATTCCATC+TGG | + | chr3.4:79495166-79495185 | MS.gene77585:CDS | 45.0% |
| AAACCAGCTACTACCACCAC+AGG | - | chr3.4:79495619-79495638 | None:intergenic | 50.0% | |
| AAGAGGAACTGCAGAGGAAG+AGG | - | chr3.4:79495458-79495477 | None:intergenic | 50.0% | |
| AAGTTTCCCTTGCAACCAGC+TGG | + | chr3.4:79497072-79497091 | MS.gene77585:CDS | 50.0% | |
| ACAACCTGGGACAGCAATCT+TGG | - | chr3.4:79496569-79496588 | None:intergenic | 50.0% | |
| ACATGCACCTGCTACATTGC+TGG | - | chr3.4:79495657-79495676 | None:intergenic | 50.0% | |
| AGTGGAACGTGAAATCTCCC+GGG | + | chr3.4:79495041-79495060 | MS.gene77585:CDS | 50.0% | |
| ATTGGAGTGTATGAGGGAGG+GGG | - | chr3.4:79496879-79496898 | None:intergenic | 50.0% | |
| CAGTCATTCCAAATCGCCTG+TGG | + | chr3.4:79495600-79495619 | MS.gene77585:CDS | 50.0% | |
| CATGCTAAATCCAAGCTGCC+AGG | + | chr3.4:79495513-79495532 | MS.gene77585:CDS | 50.0% | |
| CCTCCCTCATACACTCCAAT+CGG | + | chr3.4:79496879-79496898 | MS.gene77585:CDS | 50.0% | |
| CGATTGGAGTGTATGAGGGA+GGG | - | chr3.4:79496881-79496900 | None:intergenic | 50.0% | |
| CTGAGCAGTTGCATACTGAG+GGG | - | chr3.4:79496915-79496934 | None:intergenic | 50.0% | |
| CTTTAGCCAAAGAGAGGTCG+AGG | - | chr3.4:79495552-79495571 | None:intergenic | 50.0% | |
| GAATAGCCACTACCACCAGA+TGG | - | chr3.4:79495184-79495203 | None:intergenic | 50.0% | |
| GAGTGGAACGTGAAATCTCC+CGG | + | chr3.4:79495040-79495059 | MS.gene77585:CDS | 50.0% | |
| GATTGGAGTGTATGAGGGAG+GGG | - | chr3.4:79496880-79496899 | None:intergenic | 50.0% | |
| GCACAAAAGAGGAACTGCAG+AGG | - | chr3.4:79495464-79495483 | None:intergenic | 50.0% | |
| GCTGAGCAGTTGCATACTGA+GGG | - | chr3.4:79496916-79496935 | None:intergenic | 50.0% | |
| GGTTCTCCAGACAATTCCAC+CGG | + | chr3.4:79495307-79495326 | MS.gene77585:CDS | 50.0% | |
| GTAACCCGAGAACGAGATAC+AGG | - | chr3.4:79496999-79497018 | None:intergenic | 50.0% | |
| TACTACCACCACAGGCGATT+TGG | - | chr3.4:79495611-79495630 | None:intergenic | 50.0% | |
| TCATTCCAAATCGCCTGTGG+TGG | + | chr3.4:79495603-79495622 | MS.gene77585:CDS | 50.0% | |
| TGCAGAGGAAGAGGCTTTCT+TGG | - | chr3.4:79495449-79495468 | None:intergenic | 50.0% | |
| TGTGGTGGTAGTAGCTGGTT+TGG | + | chr3.4:79495618-79495637 | MS.gene77585:CDS | 50.0% | |
| ! | AGCAGATTTTGAGCTCCTCG+AGG | - | chr3.4:79495233-79495252 | None:intergenic | 50.0% |
| !! | GGGATGTTGATTCCATCTGG+TGG | + | chr3.4:79495169-79495188 | MS.gene77585:CDS | 50.0% |
| AATCCAAGCTGCCAGGTGGA+AGG | + | chr3.4:79495520-79495539 | MS.gene77585:CDS | 55.0% | |
| ACGTGAAATCTCCCGGGCAA+TGG | + | chr3.4:79495047-79495066 | MS.gene77585:CDS | 55.0% | |
| AGCGCCTGTATCTCGTTCTC+GGG | + | chr3.4:79496992-79497011 | MS.gene77585:CDS | 55.0% | |
| CAGCGCCTGTATCTCGTTCT+CGG | + | chr3.4:79496991-79497010 | MS.gene77585:CDS | 55.0% | |
| CCGATTGGAGTGTATGAGGG+AGG | - | chr3.4:79496882-79496901 | None:intergenic | 55.0% | |
| CGCTGAGCAGTTGCATACTG+AGG | - | chr3.4:79496917-79496936 | None:intergenic | 55.0% | |
| CGTGAAATCTCCCGGGCAAT+GGG | + | chr3.4:79495048-79495067 | MS.gene77585:CDS | 55.0% | |
| GCAGATGGGAGGCAGACAAT+GGG | + | chr3.4:79496373-79496392 | MS.gene77585:intron | 55.0% | |
| GCTAAATCCAAGCTGCCAGG+TGG | + | chr3.4:79495516-79495535 | MS.gene77585:CDS | 55.0% | |
| GGAACCAAGATTGCTGTCCC+AGG | + | chr3.4:79496562-79496581 | MS.gene77585:CDS | 55.0% | |
| TGCAGATGGGAGGCAGACAA+TGG | + | chr3.4:79496372-79496391 | MS.gene77585:intron | 55.0% | |
| TTGGAGTGTATGAGGGAGGG+GGG | - | chr3.4:79496878-79496897 | None:intergenic | 55.0% | |
| TTGTGGCCTCGACCTCTCTT+TGG | + | chr3.4:79495543-79495562 | MS.gene77585:CDS | 55.0% | |
| ! | AGTTGCATACTGAGGGGTGC+CGG | - | chr3.4:79496909-79496928 | None:intergenic | 55.0% |
| ! | GAGGGGGGCTTGGTATCATA+TGG | - | chr3.4:79496863-79496882 | None:intergenic | 55.0% |
| ! | GTGAGCAATGGTTCTGCTGC+TGG | - | chr3.4:79495373-79495392 | None:intergenic | 55.0% |
| ! | GTTTTCCCAGTCCCATTGCC+CGG | - | chr3.4:79495062-79495081 | None:intergenic | 55.0% |
| ! | TTTTCCCAGTCCCATTGCCC+GGG | - | chr3.4:79495061-79495080 | None:intergenic | 55.0% |
| !! | AGCTTGCTGTTGGGCATGTC+TGG | - | chr3.4:79496439-79496458 | None:intergenic | 55.0% |
| !! | GCGCTCACCTTTTTCGTCAC+TGG | + | chr3.4:79496934-79496953 | MS.gene77585:CDS | 55.0% |
| !! | GTTTGGGGGAGCTTGCTGTT+GGG | - | chr3.4:79496448-79496467 | None:intergenic | 55.0% |
| AATCTCCCGGGCAATGGGAC+TGG | + | chr3.4:79495053-79495072 | MS.gene77585:CDS | 60.0% | |
| AGCTGCCAGGTGGAAGGTTG+TGG | + | chr3.4:79495526-79495545 | MS.gene77585:CDS | 60.0% | |
| ATCTCCCGGGCAATGGGACT+GGG | + | chr3.4:79495054-79495073 | MS.gene77585:CDS | 60.0% | |
| CAACCTTCCACCTGGCAGCT+TGG | - | chr3.4:79495526-79495545 | None:intergenic | 60.0% | |
| CGAGAACGAGATACAGGCGC+TGG | - | chr3.4:79496993-79497012 | None:intergenic | 60.0% | |
| GCTCTCTCTTCGTCCCCCTA+TGG | + | chr3.4:79495895-79495914 | MS.gene77585:CDS | 60.0% | |
| GGGGACGAAGAGAGAGCTGA+TGG | - | chr3.4:79495892-79495911 | None:intergenic | 60.0% | |
| TCGCCTGTGGTGGTAGTAGC+TGG | + | chr3.4:79495613-79495632 | MS.gene77585:CDS | 60.0% | |
| !! | GGTTTGGGGGAGCTTGCTGT+TGG | - | chr3.4:79496449-79496468 | None:intergenic | 60.0% |
| CGAGGCCACAACCTTCCACC+TGG | - | chr3.4:79495534-79495553 | None:intergenic | 65.0% | |
| GTGTATGAGGGAGGGGGGCT+TGG | - | chr3.4:79496873-79496892 | None:intergenic | 65.0% | |
| !! | AGGGGTGCCGGTTGTCCGAT+TGG | - | chr3.4:79496897-79496916 | None:intergenic | 65.0% |
| !! | CGAGATACAGGCGCTGGAGC+TGG | - | chr3.4:79496987-79497006 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 79495037 | 79497099 | 79495037 | ID=MS.gene77585 |
| chr3.4 | mRNA | 79495037 | 79497099 | 79495037 | ID=MS.gene77585.t1;Parent=MS.gene77585 |
| chr3.4 | exon | 79495037 | 79495668 | 79495037 | ID=MS.gene77585.t1.exon1;Parent=MS.gene77585.t1 |
| chr3.4 | CDS | 79495037 | 79495668 | 79495037 | ID=cds.MS.gene77585.t1;Parent=MS.gene77585.t1 |
| chr3.4 | exon | 79495780 | 79495916 | 79495780 | ID=MS.gene77585.t1.exon2;Parent=MS.gene77585.t1 |
| chr3.4 | CDS | 79495780 | 79495916 | 79495780 | ID=cds.MS.gene77585.t1;Parent=MS.gene77585.t1 |
| chr3.4 | exon | 79496377 | 79496616 | 79496377 | ID=MS.gene77585.t1.exon3;Parent=MS.gene77585.t1 |
| chr3.4 | CDS | 79496377 | 79496616 | 79496377 | ID=cds.MS.gene77585.t1;Parent=MS.gene77585.t1 |
| chr3.4 | exon | 79496732 | 79497099 | 79496732 | ID=MS.gene77585.t1.exon4;Parent=MS.gene77585.t1 |
| chr3.4 | CDS | 79496732 | 79497099 | 79496732 | ID=cds.MS.gene77585.t1;Parent=MS.gene77585.t1 |
| Gene Sequence |
| Protein sequence |
