Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77799.t1 | XP_003628145.1 | 91.2 | 455 | 18 | 4 | 1 | 449 | 1 | 439 | 3.50E-235 | 823.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77799.t1 | Q93ZL5 | 36.4 | 363 | 183 | 9 | 104 | 448 | 124 | 456 | 4.2e-43 | 177.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77799.t1 | G8A1Q8 | 91.2 | 455 | 18 | 4 | 1 | 449 | 1 | 439 | 2.5e-235 | 823.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene77799.t1 | TF | C2C2-Dof |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77799.t1 | MTR_8g044220 | 91.209 | 455 | 18 | 4 | 1 | 449 | 1 | 439 | 0.0 | 848 |
MS.gene77799.t1 | MTR_6g012450 | 36.908 | 401 | 167 | 13 | 105 | 448 | 123 | 494 | 6.48e-65 | 217 |
MS.gene77799.t1 | MTR_4g082060 | 33.198 | 491 | 242 | 18 | 11 | 447 | 5 | 463 | 5.70e-62 | 208 |
MS.gene77799.t1 | MTR_7g010950 | 33.004 | 506 | 246 | 20 | 11 | 448 | 5 | 485 | 9.84e-62 | 208 |
MS.gene77799.t1 | MTR_3g435480 | 34.112 | 428 | 204 | 15 | 64 | 448 | 72 | 464 | 7.56e-57 | 195 |
MS.gene77799.t1 | MTR_7g086780 | 37.097 | 372 | 170 | 12 | 106 | 449 | 87 | 422 | 7.93e-56 | 191 |
MS.gene77799.t1 | MTR_5g041400 | 32.620 | 374 | 155 | 13 | 81 | 449 | 82 | 363 | 8.43e-41 | 149 |
MS.gene77799.t1 | MTR_6g027450 | 33.243 | 367 | 159 | 15 | 14 | 344 | 13 | 329 | 6.29e-37 | 138 |
MS.gene77799.t1 | MTR_5g041380 | 31.977 | 344 | 135 | 15 | 112 | 449 | 121 | 371 | 3.37e-36 | 137 |
MS.gene77799.t1 | MTR_6g027460 | 29.219 | 397 | 193 | 13 | 11 | 358 | 10 | 367 | 4.44e-35 | 134 |
MS.gene77799.t1 | MTR_2g016030 | 77.419 | 62 | 14 | 0 | 110 | 171 | 39 | 100 | 3.57e-32 | 120 |
MS.gene77799.t1 | MTR_5g041420 | 64.198 | 81 | 29 | 0 | 93 | 173 | 113 | 193 | 3.61e-31 | 122 |
MS.gene77799.t1 | MTR_5g041530 | 62.338 | 77 | 29 | 0 | 95 | 171 | 117 | 193 | 2.52e-29 | 118 |
MS.gene77799.t1 | MTR_5g041530 | 33.158 | 190 | 70 | 9 | 272 | 449 | 237 | 381 | 8.57e-14 | 73.2 |
MS.gene77799.t1 | MTR_4g022370 | 67.797 | 59 | 19 | 0 | 114 | 172 | 78 | 136 | 5.12e-25 | 105 |
MS.gene77799.t1 | MTR_3g091820 | 59.701 | 67 | 27 | 0 | 107 | 173 | 32 | 98 | 7.04e-25 | 104 |
MS.gene77799.t1 | MTR_2g059540 | 74.000 | 50 | 13 | 0 | 117 | 166 | 30 | 79 | 1.47e-24 | 101 |
MS.gene77799.t1 | MTR_4g109980 | 71.698 | 53 | 15 | 0 | 116 | 168 | 38 | 90 | 4.02e-24 | 102 |
MS.gene77799.t1 | MTR_8g027295 | 61.290 | 62 | 24 | 0 | 113 | 174 | 19 | 80 | 7.26e-24 | 100 |
MS.gene77799.t1 | MTR_8g079060 | 60.606 | 66 | 25 | 1 | 118 | 183 | 29 | 93 | 8.16e-24 | 99.8 |
MS.gene77799.t1 | MTR_2g096740 | 65.000 | 60 | 21 | 0 | 118 | 177 | 62 | 121 | 8.78e-24 | 100 |
MS.gene77799.t1 | MTR_2g096740 | 65.000 | 60 | 21 | 0 | 118 | 177 | 77 | 136 | 1.17e-23 | 100 |
MS.gene77799.t1 | MTR_4g063780 | 66.102 | 59 | 20 | 0 | 114 | 172 | 71 | 129 | 1.39e-23 | 101 |
MS.gene77799.t1 | MTR_2g093220 | 63.333 | 60 | 22 | 0 | 113 | 172 | 35 | 94 | 2.10e-23 | 100 |
MS.gene77799.t1 | MTR_8g479350 | 72.222 | 54 | 15 | 0 | 118 | 171 | 68 | 121 | 2.51e-23 | 100 |
MS.gene77799.t1 | MTR_8g015840 | 69.231 | 52 | 16 | 0 | 118 | 169 | 20 | 71 | 6.05e-23 | 97.1 |
MS.gene77799.t1 | MTR_8g068210 | 46.914 | 81 | 43 | 0 | 92 | 172 | 6 | 86 | 1.28e-22 | 98.6 |
MS.gene77799.t1 | MTR_7g059400 | 69.811 | 53 | 16 | 0 | 120 | 172 | 78 | 130 | 1.71e-22 | 98.6 |
MS.gene77799.t1 | MTR_7g024670 | 49.451 | 91 | 35 | 2 | 82 | 172 | 52 | 131 | 1.75e-22 | 99.0 |
MS.gene77799.t1 | MTR_1g077600 | 56.452 | 62 | 27 | 0 | 112 | 173 | 37 | 98 | 2.42e-22 | 96.7 |
MS.gene77799.t1 | MTR_1g077600 | 56.452 | 62 | 27 | 0 | 112 | 173 | 37 | 98 | 2.79e-22 | 97.1 |
MS.gene77799.t1 | MTR_4g088580 | 67.925 | 53 | 17 | 0 | 120 | 172 | 57 | 109 | 8.40e-22 | 97.1 |
MS.gene77799.t1 | MTR_5g031440 | 65.455 | 55 | 19 | 0 | 114 | 168 | 39 | 93 | 1.01e-21 | 96.3 |
MS.gene77799.t1 | MTR_4g461080 | 60.000 | 65 | 25 | 1 | 107 | 170 | 17 | 81 | 3.35e-21 | 93.6 |
MS.gene77799.t1 | MTR_3g077750 | 53.521 | 71 | 32 | 1 | 99 | 168 | 41 | 111 | 7.10e-21 | 93.6 |
MS.gene77799.t1 | MTR_3g090430 | 64.151 | 53 | 19 | 0 | 120 | 172 | 53 | 105 | 9.40e-21 | 93.2 |
MS.gene77799.t1 | MTR_4g089095 | 65.455 | 55 | 18 | 1 | 118 | 172 | 50 | 103 | 9.77e-21 | 92.4 |
MS.gene77799.t1 | MTR_4g089095 | 65.455 | 55 | 18 | 1 | 118 | 172 | 16 | 69 | 1.16e-20 | 91.7 |
MS.gene77799.t1 | MTR_2g014170 | 68.000 | 50 | 16 | 0 | 117 | 166 | 44 | 93 | 1.57e-20 | 92.0 |
MS.gene77799.t1 | MTR_2g014060 | 68.000 | 50 | 16 | 0 | 120 | 169 | 27 | 76 | 1.69e-20 | 92.4 |
MS.gene77799.t1 | MTR_1g056810 | 64.151 | 53 | 19 | 0 | 120 | 172 | 14 | 66 | 1.87e-20 | 91.7 |
MS.gene77799.t1 | MTR_2g013370 | 66.038 | 53 | 17 | 1 | 120 | 172 | 48 | 99 | 3.51e-20 | 90.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene77799.t1 | AT5G39660 | 37.437 | 398 | 199 | 13 | 69 | 448 | 91 | 456 | 6.92e-62 | 208 |
MS.gene77799.t1 | AT5G39660 | 37.437 | 398 | 199 | 13 | 69 | 448 | 91 | 456 | 6.92e-62 | 208 |
MS.gene77799.t1 | AT5G39660 | 37.437 | 398 | 199 | 13 | 69 | 448 | 91 | 456 | 6.92e-62 | 208 |
MS.gene77799.t1 | AT3G47500 | 36.340 | 388 | 173 | 16 | 105 | 449 | 92 | 448 | 5.46e-57 | 195 |
MS.gene77799.t1 | AT1G69570 | 29.622 | 476 | 219 | 14 | 9 | 449 | 3 | 397 | 1.48e-45 | 163 |
MS.gene77799.t1 | AT1G26790 | 31.356 | 354 | 143 | 15 | 111 | 449 | 104 | 372 | 2.16e-35 | 135 |
MS.gene77799.t1 | AT1G29160 | 69.863 | 73 | 22 | 0 | 99 | 171 | 43 | 115 | 5.52e-34 | 125 |
MS.gene77799.t1 | AT5G62430 | 62.921 | 89 | 32 | 1 | 83 | 171 | 20 | 107 | 6.56e-34 | 129 |
MS.gene77799.t1 | AT5G62430 | 41.000 | 100 | 46 | 3 | 355 | 449 | 207 | 298 | 1.05e-11 | 65.9 |
MS.gene77799.t1 | AT2G34140 | 76.667 | 60 | 14 | 0 | 112 | 171 | 52 | 111 | 4.02e-32 | 120 |
MS.gene77799.t1 | AT5G60850 | 66.667 | 69 | 21 | 1 | 118 | 186 | 51 | 117 | 1.81e-26 | 108 |
MS.gene77799.t1 | AT3G55370 | 68.333 | 60 | 19 | 0 | 114 | 173 | 72 | 131 | 5.97e-25 | 105 |
MS.gene77799.t1 | AT3G55370 | 68.333 | 60 | 19 | 0 | 114 | 173 | 72 | 131 | 6.60e-25 | 105 |
MS.gene77799.t1 | AT3G55370 | 68.333 | 60 | 19 | 0 | 114 | 173 | 117 | 176 | 9.74e-25 | 105 |
MS.gene77799.t1 | AT1G51700 | 68.421 | 57 | 17 | 1 | 118 | 173 | 33 | 89 | 1.90e-24 | 100 |
MS.gene77799.t1 | AT2G37590 | 65.000 | 60 | 21 | 0 | 114 | 173 | 85 | 144 | 1.94e-24 | 103 |
MS.gene77799.t1 | AT2G28810 | 69.643 | 56 | 17 | 0 | 114 | 169 | 73 | 128 | 3.20e-24 | 103 |
MS.gene77799.t1 | AT3G45610 | 50.633 | 79 | 34 | 1 | 100 | 173 | 17 | 95 | 5.42e-24 | 100 |
MS.gene77799.t1 | AT2G28810 | 69.643 | 56 | 17 | 0 | 114 | 169 | 90 | 145 | 5.74e-24 | 102 |
MS.gene77799.t1 | AT5G60200 | 61.667 | 60 | 23 | 0 | 114 | 173 | 51 | 110 | 9.44e-24 | 100 |
MS.gene77799.t1 | AT3G61850 | 51.765 | 85 | 39 | 1 | 113 | 195 | 57 | 141 | 1.22e-23 | 100 |
MS.gene77799.t1 | AT3G61850 | 51.765 | 85 | 39 | 1 | 113 | 195 | 57 | 141 | 1.22e-23 | 100 |
MS.gene77799.t1 | AT5G65590 | 51.685 | 89 | 40 | 1 | 85 | 173 | 11 | 96 | 1.37e-23 | 101 |
MS.gene77799.t1 | AT3G61850 | 51.765 | 85 | 39 | 1 | 113 | 195 | 69 | 153 | 1.41e-23 | 100 |
MS.gene77799.t1 | AT3G61850 | 51.765 | 85 | 39 | 1 | 113 | 195 | 57 | 141 | 1.92e-23 | 100 |
MS.gene77799.t1 | AT1G07640 | 69.091 | 55 | 17 | 0 | 118 | 172 | 21 | 75 | 2.05e-23 | 99.8 |
MS.gene77799.t1 | AT3G61850 | 51.765 | 85 | 39 | 1 | 113 | 195 | 69 | 153 | 2.11e-23 | 100 |
MS.gene77799.t1 | AT4G38000 | 68.966 | 58 | 17 | 1 | 117 | 174 | 40 | 96 | 2.16e-23 | 99.0 |
MS.gene77799.t1 | AT3G50410 | 50.000 | 80 | 30 | 1 | 103 | 172 | 5 | 84 | 2.42e-23 | 99.0 |
MS.gene77799.t1 | AT3G21270 | 69.811 | 53 | 16 | 0 | 118 | 170 | 29 | 81 | 2.61e-23 | 97.8 |
MS.gene77799.t1 | AT1G07640 | 69.091 | 55 | 17 | 0 | 118 | 172 | 77 | 131 | 3.73e-23 | 100 |
MS.gene77799.t1 | AT1G07640 | 69.091 | 55 | 17 | 0 | 118 | 172 | 85 | 139 | 4.62e-23 | 100 |
MS.gene77799.t1 | AT4G24060 | 56.061 | 66 | 29 | 0 | 107 | 172 | 42 | 107 | 5.62e-23 | 99.8 |
MS.gene77799.t1 | AT5G02460 | 66.102 | 59 | 20 | 0 | 114 | 172 | 91 | 149 | 6.10e-23 | 100 |
MS.gene77799.t1 | AT1G64620 | 61.667 | 60 | 23 | 0 | 107 | 166 | 38 | 97 | 1.87e-22 | 98.6 |
MS.gene77799.t1 | AT4G00940 | 50.000 | 78 | 39 | 0 | 113 | 190 | 63 | 140 | 3.07e-22 | 97.1 |
MS.gene77799.t1 | AT4G00940 | 50.000 | 78 | 39 | 0 | 113 | 190 | 63 | 140 | 3.07e-22 | 97.1 |
MS.gene77799.t1 | AT4G00940 | 50.000 | 78 | 39 | 0 | 113 | 190 | 63 | 140 | 3.07e-22 | 97.1 |
MS.gene77799.t1 | AT2G28510 | 68.519 | 54 | 17 | 0 | 120 | 173 | 50 | 103 | 4.14e-22 | 96.3 |
MS.gene77799.t1 | AT1G47655 | 69.388 | 49 | 15 | 0 | 118 | 166 | 29 | 77 | 1.16e-21 | 93.2 |
MS.gene77799.t1 | AT1G28310 | 65.455 | 55 | 19 | 0 | 118 | 172 | 27 | 81 | 1.43e-21 | 95.1 |
MS.gene77799.t1 | AT1G28310 | 65.455 | 55 | 19 | 0 | 118 | 172 | 51 | 105 | 2.02e-21 | 95.1 |
MS.gene77799.t1 | AT5G66940 | 60.000 | 55 | 22 | 0 | 118 | 172 | 32 | 86 | 3.71e-21 | 92.0 |
MS.gene77799.t1 | AT4G21050 | 43.956 | 91 | 49 | 1 | 103 | 191 | 9 | 99 | 3.97e-21 | 91.7 |
MS.gene77799.t1 | AT2G46590 | 64.151 | 53 | 19 | 0 | 113 | 165 | 63 | 115 | 1.11e-20 | 93.6 |
MS.gene77799.t1 | AT2G46590 | 64.151 | 53 | 19 | 0 | 113 | 165 | 75 | 127 | 1.19e-20 | 93.6 |
MS.gene77799.t1 | AT3G52440 | 62.264 | 53 | 20 | 0 | 120 | 172 | 27 | 79 | 1.93e-20 | 90.9 |
MS.gene77799.t1 | AT3G52440 | 62.264 | 53 | 20 | 0 | 120 | 172 | 46 | 98 | 2.42e-20 | 90.9 |
MS.gene77799.t1 | AT1G21340 | 61.111 | 54 | 21 | 0 | 120 | 173 | 40 | 93 | 3.77e-20 | 90.1 |
MS.gene77799.t1 | AT5G62940 | 65.306 | 49 | 17 | 0 | 120 | 168 | 75 | 123 | 1.89e-19 | 90.1 |
MS.gene77799.t1 | AT4G21040 | 67.347 | 49 | 16 | 0 | 120 | 168 | 27 | 75 | 4.20e-18 | 83.6 |
MS.gene77799.t1 | AT4G21080 | 65.306 | 49 | 17 | 0 | 120 | 168 | 27 | 75 | 2.50e-17 | 81.6 |
MS.gene77799.t1 | AT4G21030 | 50.769 | 65 | 25 | 2 | 106 | 163 | 2 | 66 | 1.81e-12 | 66.6 |
Find 102 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTCGCTCCGGATCCTTTC+AGG | 0.087266 | 8.1:-60593387 | MS.gene77799:CDS |
ATACGATGAAGCCGAATATT+TGG | 0.219567 | 8.1:-60593604 | MS.gene77799:CDS |
AAAACACTTCCTTTCATAAT+AGG | 0.225913 | 8.1:+60593491 | None:intergenic |
TCCATTTGGCCAATCCAATT+TGG | 0.234872 | 8.1:+60593758 | None:intergenic |
GAACTCTTAGCAGCCTCTTC+TGG | 0.248749 | 8.1:+60593554 | None:intergenic |
ATTGGGGCTGTATGCCAAAT+TGG | 0.283292 | 8.1:-60593772 | MS.gene77799:CDS |
TTGCTTATTTCTACGCTTAC+CGG | 0.293241 | 8.1:+60594210 | None:intergenic |
GGACTTGACGTTATGTTATC+AGG | 0.299089 | 8.1:+60593836 | None:intergenic |
GGTAATAGGTCACCAACTTT+AGG | 0.303102 | 8.1:-60593659 | MS.gene77799:CDS |
ACCGATGACACCTTCGTATT+GGG | 0.307791 | 8.1:-60593789 | MS.gene77799:CDS |
GGACAGCTGGTGGAGTAATT+AGG | 0.315052 | 8.1:-60594249 | MS.gene77799:CDS |
TTGATTGTCAGCATCTCTTT+TGG | 0.322651 | 8.1:+60594405 | None:intergenic |
GTGGTACTTGTTCCGGTAAT+AGG | 0.368265 | 8.1:-60593673 | MS.gene77799:CDS |
TTGTGGATTAGCTTGTTTGC+TGG | 0.369067 | 8.1:+60594519 | None:intergenic |
GCTAGCAGTGGTACTTGTTC+CGG | 0.387977 | 8.1:-60593680 | MS.gene77799:CDS |
TCTGTGATAGCTGCTGAATC+CGG | 0.390319 | 8.1:-60594004 | MS.gene77799:CDS |
GCCAAATTGGATTGGCCAAA+TGG | 0.393333 | 8.1:-60593759 | MS.gene77799:CDS |
AGCTGCTGAATCCGGGGAAA+TGG | 0.396343 | 8.1:-60593996 | MS.gene77799:CDS |
CTAACGATAATTCTTCCATT+TGG | 0.399422 | 8.1:+60593744 | None:intergenic |
ATGGAAGAATTATCGTTAGT+TGG | 0.407541 | 8.1:-60593740 | MS.gene77799:CDS |
AAATGCCACCGGATTCCAAC+AGG | 0.408721 | 8.1:+60593862 | None:intergenic |
GTACCGGTATTGTACATGTT+TGG | 0.410276 | 8.1:+60594478 | None:intergenic |
GTAATTAGGAATGTTCCTAT+TGG | 0.410965 | 8.1:-60594235 | MS.gene77799:CDS |
GGTACTGCATCAAGGGTAAC+AGG | 0.411943 | 8.1:+60594163 | None:intergenic |
CTACGCTTACCGGCTCCAAT+AGG | 0.417710 | 8.1:+60594220 | None:intergenic |
TACGATGAAGCCGAATATTT+GGG | 0.418538 | 8.1:-60593603 | MS.gene77799:CDS |
CGAGAACTTACATTTGACTT+AGG | 0.422907 | 8.1:+60593455 | None:intergenic |
TAAAGTTGGTGACCTATTAC+CGG | 0.424336 | 8.1:+60593661 | None:intergenic |
TCTACAGCCATCATGGTTGC+AGG | 0.425416 | 8.1:+60593815 | None:intergenic |
GGACACGGCAGAACCTTGTC+TGG | 0.427129 | 8.1:+60594364 | None:intergenic |
AGAAACTGTGTTAAATATCA+AGG | 0.432446 | 8.1:-60594092 | MS.gene77799:CDS |
GTTTCTACCGATTCACTAAG+AGG | 0.436362 | 8.1:+60594109 | None:intergenic |
TACCGATGACACCTTCGTAT+TGG | 0.437630 | 8.1:-60593790 | MS.gene77799:CDS |
GTGTCCTCGCTGCAATAGTT+TGG | 0.447623 | 8.1:-60594347 | MS.gene77799:CDS |
CACGCTTTCCTGAAAGGATC+CGG | 0.450006 | 8.1:+60593379 | None:intergenic |
GACTTATCCCTGTTGGAATC+CGG | 0.450042 | 8.1:-60593870 | MS.gene77799:CDS |
CATTCCATCACCTTCCTCTT+CGG | 0.453115 | 8.1:-60593702 | MS.gene77799:CDS |
CTGTGATAGCTGCTGAATCC+GGG | 0.458061 | 8.1:-60594003 | MS.gene77799:CDS |
TTCTGAATGCTCCATTTCCC+CGG | 0.459948 | 8.1:+60593985 | None:intergenic |
CAATACCGGTACTTTGAAAC+CGG | 0.464327 | 8.1:-60594467 | MS.gene77799:CDS |
CTCCATGGACTTATCCCTGT+TGG | 0.466430 | 8.1:-60593877 | MS.gene77799:CDS |
CCGGAGCGAGAGAAAGCAGC+AGG | 0.481752 | 8.1:+60593398 | None:intergenic |
TTAGGAAAACATTGTAGAGA+TGG | 0.504456 | 8.1:-60593641 | MS.gene77799:CDS |
CGGTACTTCTACAGCCATCA+TGG | 0.505901 | 8.1:+60593808 | None:intergenic |
GGAAGTTCCTCTTAGTGAAT+CGG | 0.506714 | 8.1:-60594116 | MS.gene77799:CDS |
TGTCAGAGGTATTGGACAGC+TGG | 0.509122 | 8.1:-60594262 | MS.gene77799:CDS |
AGGCTGCTAAGAGTTCTATA+TGG | 0.510382 | 8.1:-60593547 | MS.gene77799:CDS |
ACTAAGAGGAACTTCCTCCT+TGG | 0.511294 | 8.1:+60594123 | None:intergenic |
ATTATTACTCCGCTCCTCCA+TGG | 0.512821 | 8.1:-60593892 | MS.gene77799:CDS |
CCTGCTGCTTTCTCTCGCTC+CGG | 0.514923 | 8.1:-60593398 | MS.gene77799:CDS |
GGCTGTATGCCAAATTGGAT+TGG | 0.523809 | 8.1:-60593767 | MS.gene77799:CDS |
TGTCACCGGTTTCAAAGTAC+CGG | 0.526533 | 8.1:+60594462 | None:intergenic |
AGGAATGTTCCTATTGGAGC+CGG | 0.533831 | 8.1:-60594229 | MS.gene77799:CDS |
ATATTACACGCTTTCCTGAA+AGG | 0.538533 | 8.1:+60593373 | None:intergenic |
GAAATGGAGCATTCAGAAAG+TGG | 0.543981 | 8.1:-60593980 | MS.gene77799:CDS |
TTAGTTGGATCTGCGTTCAA+CGG | 0.546446 | 8.1:-60593725 | MS.gene77799:CDS |
TTGGAATCTATGTGTATGAC+AGG | 0.546648 | 8.1:+60594142 | None:intergenic |
AATGAAAAGCATGACCATGA+TGG | 0.548748 | 8.1:+60595713 | None:intergenic |
ATTCCAAACATGTACAATAC+CGG | 0.552268 | 8.1:-60594481 | MS.gene77799:CDS |
TAATAATGAAGCGAATGTAA+AGG | 0.553509 | 8.1:+60593908 | None:intergenic |
TGTTGATGTTTGTACGAATG+AGG | 0.556212 | 8.1:-60594545 | MS.gene77799:CDS |
CAGAATTAATGATCCAGAAG+AGG | 0.559620 | 8.1:-60593567 | MS.gene77799:CDS |
TTATCAGGCTTAAATGCCAC+CGG | 0.562271 | 8.1:+60593851 | None:intergenic |
CAGAGGTATTGGACAGCTGG+TGG | 0.563331 | 8.1:-60594259 | MS.gene77799:CDS |
TGTCATACACATAGATTCCA+AGG | 0.569094 | 8.1:-60594140 | MS.gene77799:CDS |
TATGACAGGTACTGCATCAA+GGG | 0.571285 | 8.1:+60594156 | None:intergenic |
CAGAACAAACCTATTATGAA+AGG | 0.575243 | 8.1:-60593500 | MS.gene77799:CDS |
CCCCAATACGAAGGTGTCAT+CGG | 0.575911 | 8.1:+60593788 | None:intergenic |
GTCAAGTCCTGCAACCATGA+TGG | 0.576641 | 8.1:-60593822 | MS.gene77799:CDS |
AAACTATTGCAGCGAGGACA+CGG | 0.577128 | 8.1:+60594349 | None:intergenic |
TTCCAACAGGGATAAGTCCA+TGG | 0.577632 | 8.1:+60593875 | None:intergenic |
ATAGTATTAGCATCTTCTTG+TGG | 0.578337 | 8.1:+60594502 | None:intergenic |
GAAAGTGGAATAGAGCATGT+TGG | 0.578755 | 8.1:-60593965 | MS.gene77799:CDS |
AGCAGCTATCACAGAAGACC+TGG | 0.580944 | 8.1:+60594012 | None:intergenic |
GAAACTGTGTTAAATATCAA+GGG | 0.585315 | 8.1:-60594091 | MS.gene77799:CDS |
GGAATTAAGCCGTTGCATTG+TGG | 0.587832 | 8.1:+60593929 | None:intergenic |
CCGATGACACCTTCGTATTG+GGG | 0.589925 | 8.1:-60593788 | MS.gene77799:CDS |
AGGATATTGAGAACTCGTCC+AGG | 0.596188 | 8.1:-60594030 | MS.gene77799:CDS |
GTATGACAGGTACTGCATCA+AGG | 0.597457 | 8.1:+60594155 | None:intergenic |
TCCACATCAACAATCCATCA+TGG | 0.598956 | 8.1:-60595727 | MS.gene77799:intron |
ACTTTGACACCACAATGCAA+CGG | 0.601139 | 8.1:-60593938 | MS.gene77799:CDS |
ACCATGATGGATTGTTGATG+TGG | 0.602567 | 8.1:+60595726 | None:intergenic |
AGTACCACTGCTAGCCGAAG+AGG | 0.608123 | 8.1:+60593688 | None:intergenic |
CTAGCCGAAGAGGAAGGTGA+TGG | 0.608712 | 8.1:+60593698 | None:intergenic |
CCTTCCTCTTCGGCTAGCAG+TGG | 0.612556 | 8.1:-60593692 | MS.gene77799:CDS |
ATTACAATGTTAACCAACCA+AGG | 0.617440 | 8.1:-60594300 | MS.gene77799:CDS |
GGACGCTTCTACTGTCAAAG+AGG | 0.623946 | 8.1:-60594050 | MS.gene77799:CDS |
GTGAATCTGTGAATCTGTGG+TGG | 0.627558 | 8.1:+60595755 | None:intergenic |
TTATCCCTGTTGGAATCCGG+TGG | 0.630569 | 8.1:-60593867 | MS.gene77799:CDS |
TTTGAAACCGGTGACAAAAG+CGG | 0.633261 | 8.1:-60594455 | MS.gene77799:CDS |
TGTGATAGCTGCTGAATCCG+GGG | 0.635766 | 8.1:-60594002 | MS.gene77799:CDS |
GGAACTTGACAATTCTGCAA+AGG | 0.639283 | 8.1:+60594184 | None:intergenic |
GGCATACAGCCCCAATACGA+AGG | 0.648370 | 8.1:+60593779 | None:intergenic |
GGGATAAGTCCATGGAGGAG+CGG | 0.648425 | 8.1:+60593883 | None:intergenic |
CGGAGCGAGAGAAAGCAGCA+GGG | 0.655440 | 8.1:+60593399 | None:intergenic |
TGAATCTGTGAATCTGTGGT+GGG | 0.669351 | 8.1:+60595756 | None:intergenic |
AGAGTGAATCTGTGAATCTG+TGG | 0.680020 | 8.1:+60595752 | None:intergenic |
AATGCCACCGGATTCCAACA+GGG | 0.686661 | 8.1:+60593863 | None:intergenic |
CCACTGCTAGCCGAAGAGGA+AGG | 0.690209 | 8.1:+60593692 | None:intergenic |
GTCTCCAAACTATTGCAGCG+AGG | 0.702604 | 8.1:+60594343 | None:intergenic |
CAACAGGGATAAGTCCATGG+AGG | 0.740228 | 8.1:+60593878 | None:intergenic |
CATACACATAGATTCCAAGG+AGG | 0.765853 | 8.1:-60594137 | MS.gene77799:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTAAAATGAAATATGTT+AGG | - | chr8.1:60594175-60594194 | MS.gene77799:CDS | 10.0% |
!! | AATATATAAGAAAGATAAAA+AGG | + | chr8.1:60593544-60593563 | None:intergenic | 10.0% |
!!! | TATCTTTCTTATATATTTTT+TGG | - | chr8.1:60593547-60593566 | MS.gene77799:CDS | 10.0% |
!! | AAAATGTTTATATTATAGCT+AGG | - | chr8.1:60593757-60593776 | MS.gene77799:CDS | 15.0% |
!! | AAATCAATGTTGTTAAATAG+TGG | - | chr8.1:60594367-60594386 | MS.gene77799:CDS | 20.0% |
!! | ATGAAAGGAAAAAAAAATCT+GGG | + | chr8.1:60593626-60593645 | None:intergenic | 20.0% |
!! | ATTCGTATATATATAGTTCT+AGG | - | chr8.1:60593676-60593695 | MS.gene77799:CDS | 20.0% |
!! | TAATCAAACAGTTAAAGAAT+AGG | + | chr8.1:60594272-60594291 | None:intergenic | 20.0% |
!! | TATGAAAGGAAAAAAAAATC+TGG | + | chr8.1:60593627-60593646 | None:intergenic | 20.0% |
!! | TGACATGAAAAATGTTAAAT+TGG | - | chr8.1:60593928-60593947 | MS.gene77799:CDS | 20.0% |
!!! | GAATTATTTTTGTTTGAATC+TGG | - | chr8.1:60593869-60593888 | MS.gene77799:CDS | 20.0% |
!!! | TATCAATGAGTTATAACTTT+TGG | - | chr8.1:60594552-60594571 | MS.gene77799:CDS | 20.0% |
!!! | TATTGACTTATTCAAATAAG+CGG | + | chr8.1:60594489-60594508 | None:intergenic | 20.0% |
!!! | TCATTAATTCTGATAGTTTT+CGG | + | chr8.1:60595635-60595654 | None:intergenic | 20.0% |
!!! | TGTTTGATAATTTGTTTTGA+AGG | - | chr8.1:60593790-60593809 | MS.gene77799:CDS | 20.0% |
! | AAAACACTTCCTTTCATAAT+AGG | + | chr8.1:60595722-60595741 | None:intergenic | 25.0% |
! | AAATTGGACCAAATTAATTG+AGG | - | chr8.1:60593944-60593963 | MS.gene77799:CDS | 25.0% |
! | ACTATAGAAAATAAGTGGTA+GGG | - | chr8.1:60593838-60593857 | MS.gene77799:CDS | 25.0% |
! | AGAAACTGTGTTAAATATCA+AGG | - | chr8.1:60595118-60595137 | MS.gene77799:intron | 25.0% |
! | ATTGGTATTGTTTAATCTGT+GGG | - | chr8.1:60594317-60594336 | MS.gene77799:CDS | 25.0% |
! | GAAACTGTGTTAAATATCAA+GGG | - | chr8.1:60595119-60595138 | MS.gene77799:intron | 25.0% |
! | TAAACAATACCAATAACTCA+TGG | + | chr8.1:60594311-60594330 | None:intergenic | 25.0% |
! | TAATAATGAAGCGAATGTAA+AGG | + | chr8.1:60595305-60595324 | None:intergenic | 25.0% |
! | TACTATAGAAAATAAGTGGT+AGG | - | chr8.1:60593837-60593856 | MS.gene77799:CDS | 25.0% |
! | TATTGGTATTGTTTAATCTG+TGG | - | chr8.1:60594316-60594335 | MS.gene77799:CDS | 25.0% |
! | TTAAAAAGACAACTTGCATT+CGG | + | chr8.1:60594579-60594598 | None:intergenic | 25.0% |
! | TTGTACTAAATAATGTATCG+TGG | + | chr8.1:60594430-60594449 | None:intergenic | 25.0% |
! | TTTGAACTTAACATAACAAC+AGG | + | chr8.1:60594218-60594237 | None:intergenic | 25.0% |
!! | GTGTTACTATAGAAAATAAG+TGG | - | chr8.1:60593833-60593852 | MS.gene77799:CDS | 25.0% |
!! | TTAATTTTGTGTTAATCCTC+TGG | + | chr8.1:60594162-60594181 | None:intergenic | 25.0% |
!! | TTGATAGTATGCATTTCTAT+CGG | + | chr8.1:60594538-60594557 | None:intergenic | 25.0% |
!!! | TGAATCTGGTTTTTTTAAGT+TGG | - | chr8.1:60593883-60593902 | MS.gene77799:CDS | 25.0% |
!!! | TTTTTTCCTTTCATACTGAA+TGG | - | chr8.1:60593632-60593651 | MS.gene77799:CDS | 25.0% |
AAGGTGCAAAAAAGATGTAA+AGG | + | chr8.1:60593525-60593544 | None:intergenic | 30.0% | |
ACTAAGTATAAATCGTTCGT+GGG | - | chr8.1:60594041-60594060 | MS.gene77799:CDS | 30.0% | |
AGAACACACCTCAATTAATT+TGG | + | chr8.1:60593955-60593974 | None:intergenic | 30.0% | |
AGAGTAAAACCATGAGTTAT+TGG | - | chr8.1:60594299-60594318 | MS.gene77799:CDS | 30.0% | |
ATAATTTCAGCCCAATTACT+CGG | + | chr8.1:60594010-60594029 | None:intergenic | 30.0% | |
ATAGTATTAGCATCTTCTTG+TGG | + | chr8.1:60594711-60594730 | None:intergenic | 30.0% | |
ATGGAAGAATTATCGTTAGT+TGG | - | chr8.1:60595470-60595489 | MS.gene77799:intron | 30.0% | |
ATTACAATGTTAACCAACCA+AGG | - | chr8.1:60594910-60594929 | MS.gene77799:intron | 30.0% | |
ATTCCAAACATGTACAATAC+CGG | - | chr8.1:60594729-60594748 | MS.gene77799:intron | 30.0% | |
ATTTCTGCAAAAATTGTCAG+AGG | - | chr8.1:60594934-60594953 | MS.gene77799:intron | 30.0% | |
CAGAACAAACCTATTATGAA+AGG | - | chr8.1:60595710-60595729 | MS.gene77799:intron | 30.0% | |
CTAACGATAATTCTTCCATT+TGG | + | chr8.1:60595469-60595488 | None:intergenic | 30.0% | |
CTATATCCATTCAGTATGAA+AGG | + | chr8.1:60593641-60593660 | None:intergenic | 30.0% | |
GTAATTAGGAATGTTCCTAT+TGG | - | chr8.1:60594975-60594994 | MS.gene77799:intron | 30.0% | |
TGTTCTATTCACTGTATCAT+TGG | - | chr8.1:60593969-60593988 | MS.gene77799:CDS | 30.0% | |
TTAGGAAAACATTGTAGAGA+TGG | - | chr8.1:60595569-60595588 | MS.gene77799:intron | 30.0% | |
TTCATACTGAATGGATATAG+AGG | - | chr8.1:60593641-60593660 | MS.gene77799:CDS | 30.0% | |
! | CGTCCATTTCAATTTTTCTA+TGG | + | chr8.1:60595145-60595164 | None:intergenic | 30.0% |
! | CTACAATGTTTTCCTAAAGT+TGG | + | chr8.1:60595566-60595585 | None:intergenic | 30.0% |
ATACGATGAAGCCGAATATT+TGG | - | chr8.1:60595606-60595625 | MS.gene77799:intron | 35.0% | |
CAAATAGCAGTGATATAGCA+CGG | - | chr8.1:60594458-60594477 | MS.gene77799:CDS | 35.0% | |
CACGAACGATTTATACTTAG+TGG | + | chr8.1:60594042-60594061 | None:intergenic | 35.0% | |
CACTAAGTATAAATCGTTCG+TGG | - | chr8.1:60594040-60594059 | MS.gene77799:CDS | 35.0% | |
CAGAATTAATGATCCAGAAG+AGG | - | chr8.1:60595643-60595662 | MS.gene77799:intron | 35.0% | |
CTGTATCATTGGAATATGTG+TGG | - | chr8.1:60593980-60593999 | MS.gene77799:CDS | 35.0% | |
CTTCCAAAAAGCTTGATTGA+AGG | + | chr8.1:60593415-60593434 | None:intergenic | 35.0% | |
GGGCCATAGAAAAATTGAAA+TGG | - | chr8.1:60595139-60595158 | MS.gene77799:intron | 35.0% | |
TACGATGAAGCCGAATATTT+GGG | - | chr8.1:60595607-60595626 | MS.gene77799:intron | 35.0% | |
TGTCATACACATAGATTCCA+AGG | - | chr8.1:60595070-60595089 | MS.gene77799:intron | 35.0% | |
TGTTGATGTTTGTACGAATG+AGG | - | chr8.1:60594665-60594684 | MS.gene77799:intron | 35.0% | |
TTGGAATCTATGTGTATGAC+AGG | + | chr8.1:60595071-60595090 | None:intergenic | 35.0% | |
TTTGGTACTCAATTGCAGAA+TGG | - | chr8.1:60594618-60594637 | MS.gene77799:intron | 35.0% | |
! | AATGAAAAGCATGACCATGA+TGG | + | chr8.1:60593500-60593519 | None:intergenic | 35.0% |
! | CAATTTTTGCAGAAATGCCT+TGG | + | chr8.1:60594930-60594949 | None:intergenic | 35.0% |
! | CGAGAACTTACATTTGACTT+AGG | + | chr8.1:60595758-60595777 | None:intergenic | 35.0% |
! | CTGTTCAGATTTTGTTCTCA+AGG | + | chr8.1:60595693-60595712 | None:intergenic | 35.0% |
! | GATCCTTCAATCAAGCTTTT+TGG | - | chr8.1:60593409-60593428 | MS.gene77799:CDS | 35.0% |
! | GCAAAAATTGTCAGAGGTAT+TGG | - | chr8.1:60594940-60594959 | MS.gene77799:intron | 35.0% |
! | TTGATTGTCAGCATCTCTTT+TGG | + | chr8.1:60594808-60594827 | None:intergenic | 35.0% |
!! | TAAAGTTGGTGACCTATTAC+CGG | + | chr8.1:60595552-60595571 | None:intergenic | 35.0% |
!! | TTGCTTATTTCTACGCTTAC+CGG | + | chr8.1:60595003-60595022 | None:intergenic | 35.0% |
ACTTTGACACCACAATGCAA+CGG | - | chr8.1:60595272-60595291 | MS.gene77799:intron | 40.0% | |
AGAGTGAATCTGTGAATCTG+TGG | + | chr8.1:60593461-60593480 | None:intergenic | 40.0% | |
AGGCTGCTAAGAGTTCTATA+TGG | - | chr8.1:60595663-60595682 | MS.gene77799:intron | 40.0% | |
CATACACATAGATTCCAAGG+AGG | - | chr8.1:60595073-60595092 | MS.gene77799:intron | 40.0% | |
GAAAGTGGAATAGAGCATGT+TGG | - | chr8.1:60595245-60595264 | MS.gene77799:intron | 40.0% | |
GGAACTTGACAATTCTGCAA+AGG | + | chr8.1:60595029-60595048 | None:intergenic | 40.0% | |
GGAAGTTCCTCTTAGTGAAT+CGG | - | chr8.1:60595094-60595113 | MS.gene77799:intron | 40.0% | |
GGACTTGACGTTATGTTATC+AGG | + | chr8.1:60595377-60595396 | None:intergenic | 40.0% | |
GGTAATAGGTCACCAACTTT+AGG | - | chr8.1:60595551-60595570 | MS.gene77799:intron | 40.0% | |
GTATGTCAACTGACACAGTT+TGG | - | chr8.1:60594600-60594619 | MS.gene77799:intron | 40.0% | |
GTCAGACTTTACTTACGTTC+TGG | - | chr8.1:60594099-60594118 | MS.gene77799:CDS | 40.0% | |
TCCACATCAACAATCCATCA+TGG | - | chr8.1:60593483-60593502 | MS.gene77799:CDS | 40.0% | |
TCCATTTGGCCAATCCAATT+TGG | + | chr8.1:60595455-60595474 | None:intergenic | 40.0% | |
TGAATCTGTGAATCTGTGGT+GGG | + | chr8.1:60593457-60593476 | None:intergenic | 40.0% | |
TTAGTTGGATCTGCGTTCAA+CGG | - | chr8.1:60595485-60595504 | MS.gene77799:intron | 40.0% | |
TTATCAGGCTTAAATGCCAC+CGG | + | chr8.1:60595362-60595381 | None:intergenic | 40.0% | |
TTCCTGAGTGGGATAATTCT+TGG | - | chr8.1:60594077-60594096 | MS.gene77799:CDS | 40.0% | |
! | GAAATGGAGCATTCAGAAAG+TGG | - | chr8.1:60595230-60595249 | MS.gene77799:intron | 40.0% |
! | GTACCGGTATTGTACATGTT+TGG | + | chr8.1:60594735-60594754 | None:intergenic | 40.0% |
! | GTTAATCCTCTGGTTCCTAA+GGG | + | chr8.1:60594152-60594171 | None:intergenic | 40.0% |
! | GTTTTCGGCACCCAAATATT+CGG | + | chr8.1:60595620-60595639 | None:intergenic | 40.0% |
! | TATGACAGGTACTGCATCAA+GGG | + | chr8.1:60595057-60595076 | None:intergenic | 40.0% |
! | TGTTAATCCTCTGGTTCCTA+AGG | + | chr8.1:60594153-60594172 | None:intergenic | 40.0% |
! | TTTGAAACCGGTGACAAAAG+CGG | - | chr8.1:60594755-60594774 | MS.gene77799:intron | 40.0% |
! | TTTTGCAGAAATGCCTTGGT+TGG | + | chr8.1:60594926-60594945 | None:intergenic | 40.0% |
!! | ACCATGATGGATTGTTGATG+TGG | + | chr8.1:60593487-60593506 | None:intergenic | 40.0% |
!! | AGTTTTCAAGAAGCCAGACA+AGG | - | chr8.1:60594833-60594852 | MS.gene77799:intron | 40.0% |
!! | CAATACCGGTACTTTGAAAC+CGG | - | chr8.1:60594743-60594762 | MS.gene77799:intron | 40.0% |
!! | GTTTCTACCGATTCACTAAG+AGG | + | chr8.1:60595104-60595123 | None:intergenic | 40.0% |
!! | TTGTGGATTAGCTTGTTTGC+TGG | + | chr8.1:60594694-60594713 | None:intergenic | 40.0% |
AAACTATTGCAGCGAGGACA+CGG | + | chr8.1:60594864-60594883 | None:intergenic | 45.0% | |
ACCGATGACACCTTCGTATT+GGG | - | chr8.1:60595421-60595440 | MS.gene77799:intron | 45.0% | |
ACTAAGAGGAACTTCCTCCT+TGG | + | chr8.1:60595090-60595109 | None:intergenic | 45.0% | |
AGGAATGTTCCTATTGGAGC+CGG | - | chr8.1:60594981-60595000 | MS.gene77799:intron | 45.0% | |
AGGATATTGAGAACTCGTCC+AGG | - | chr8.1:60595180-60595199 | MS.gene77799:intron | 45.0% | |
ATCTGAGTTCGATTCCTGAG+TGG | - | chr8.1:60594065-60594084 | MS.gene77799:CDS | 45.0% | |
ATTATTACTCCGCTCCTCCA+TGG | - | chr8.1:60595318-60595337 | MS.gene77799:intron | 45.0% | |
ATTGGGGCTGTATGCCAAAT+TGG | - | chr8.1:60595438-60595457 | MS.gene77799:intron | 45.0% | |
CATTCCATCACCTTCCTCTT+CGG | - | chr8.1:60595508-60595527 | MS.gene77799:intron | 45.0% | |
GACCAAGAATTATCCCACTC+AGG | + | chr8.1:60594082-60594101 | None:intergenic | 45.0% | |
GACTTATCCCTGTTGGAATC+CGG | - | chr8.1:60595340-60595359 | MS.gene77799:intron | 45.0% | |
GGAATTAAGCCGTTGCATTG+TGG | + | chr8.1:60595284-60595303 | None:intergenic | 45.0% | |
GGCTGTATGCCAAATTGGAT+TGG | - | chr8.1:60595443-60595462 | MS.gene77799:intron | 45.0% | |
GTGAATCTGTGAATCTGTGG+TGG | + | chr8.1:60593458-60593477 | None:intergenic | 45.0% | |
GTGGTACTTGTTCCGGTAAT+AGG | - | chr8.1:60595537-60595556 | MS.gene77799:intron | 45.0% | |
GTGTGGTTGACCGAGTAATT+GGG | - | chr8.1:60593997-60594016 | MS.gene77799:CDS | 45.0% | |
TACCGATGACACCTTCGTAT+TGG | - | chr8.1:60595420-60595439 | MS.gene77799:intron | 45.0% | |
TCTGAGTTCGATTCCTGAGT+GGG | - | chr8.1:60594066-60594085 | MS.gene77799:CDS | 45.0% | |
TCTGTGATAGCTGCTGAATC+CGG | - | chr8.1:60595206-60595225 | MS.gene77799:intron | 45.0% | |
TGTGTGGTTGACCGAGTAAT+TGG | - | chr8.1:60593996-60594015 | MS.gene77799:CDS | 45.0% | |
TTCCAACAGGGATAAGTCCA+TGG | + | chr8.1:60595338-60595357 | None:intergenic | 45.0% | |
TTCTGAATGCTCCATTTCCC+CGG | + | chr8.1:60595228-60595247 | None:intergenic | 45.0% | |
! | GTATGACAGGTACTGCATCA+AGG | + | chr8.1:60595058-60595077 | None:intergenic | 45.0% |
!! | CTATGAACCGCTTTTGTCAC+CGG | + | chr8.1:60594765-60594784 | None:intergenic | 45.0% |
!! | GCCAAATTGGATTGGCCAAA+TGG | - | chr8.1:60595451-60595470 | MS.gene77799:intron | 45.0% |
!! | TCTATCGGTGCTGTCAATCA+CGG | + | chr8.1:60594523-60594542 | None:intergenic | 45.0% |
!! | TGTCACCGGTTTCAAAGTAC+CGG | + | chr8.1:60594751-60594770 | None:intergenic | 45.0% |
AAATGCCACCGGATTCCAAC+AGG | + | chr8.1:60595351-60595370 | None:intergenic | 50.0% | |
AATGCCACCGGATTCCAACA+GGG | + | chr8.1:60595350-60595369 | None:intergenic | 50.0% | |
AGCAGCTATCACAGAAGACC+TGG | + | chr8.1:60595201-60595220 | None:intergenic | 50.0% | |
CAACAGGGATAAGTCCATGG+AGG | + | chr8.1:60595335-60595354 | None:intergenic | 50.0% | |
CACGCTTTCCTGAAAGGATC+CGG | + | chr8.1:60595834-60595853 | None:intergenic | 50.0% | |
CCGATGACACCTTCGTATTG+GGG | - | chr8.1:60595422-60595441 | MS.gene77799:intron | 50.0% | |
CGGTACTTCTACAGCCATCA+TGG | + | chr8.1:60595405-60595424 | None:intergenic | 50.0% | |
CGTTCCAGTAATCCGGAGTT+CGG | + | chr8.1:60594125-60594144 | None:intergenic | 50.0% | |
CTCCATGGACTTATCCCTGT+TGG | - | chr8.1:60595333-60595352 | MS.gene77799:intron | 50.0% | |
CTGTGATAGCTGCTGAATCC+GGG | - | chr8.1:60595207-60595226 | MS.gene77799:intron | 50.0% | |
GAACTCTTAGCAGCCTCTTC+TGG | + | chr8.1:60595659-60595678 | None:intergenic | 50.0% | |
GCTAGCAGTGGTACTTGTTC+CGG | - | chr8.1:60595530-60595549 | MS.gene77799:intron | 50.0% | |
GGACAGCTGGTGGAGTAATT+AGG | - | chr8.1:60594961-60594980 | MS.gene77799:intron | 50.0% | |
GGACGCTTCTACTGTCAAAG+AGG | - | chr8.1:60595160-60595179 | MS.gene77799:intron | 50.0% | |
GGTACTGCATCAAGGGTAAC+AGG | + | chr8.1:60595050-60595069 | None:intergenic | 50.0% | |
GTCAAGTCCTGCAACCATGA+TGG | - | chr8.1:60595388-60595407 | MS.gene77799:intron | 50.0% | |
GTCTCCAAACTATTGCAGCG+AGG | + | chr8.1:60594870-60594889 | None:intergenic | 50.0% | |
GTGTCCTCGCTGCAATAGTT+TGG | - | chr8.1:60594863-60594882 | MS.gene77799:intron | 50.0% | |
TCTACAGCCATCATGGTTGC+AGG | + | chr8.1:60595398-60595417 | None:intergenic | 50.0% | |
TGTGATAGCTGCTGAATCCG+GGG | - | chr8.1:60595208-60595227 | MS.gene77799:intron | 50.0% | |
TTACTGGAACGCCTTCCCTT+AGG | - | chr8.1:60594134-60594153 | MS.gene77799:CDS | 50.0% | |
TTATCCCTGTTGGAATCCGG+TGG | - | chr8.1:60595343-60595362 | MS.gene77799:intron | 50.0% | |
! | ATCCTCTGGTTCCTAAGGGA+AGG | + | chr8.1:60594148-60594167 | None:intergenic | 50.0% |
!! | CCCCAATACGAAGGTGTCAT+CGG | + | chr8.1:60595425-60595444 | None:intergenic | 50.0% |
!! | TGTCAGAGGTATTGGACAGC+TGG | - | chr8.1:60594948-60594967 | MS.gene77799:intron | 50.0% |
AGCTGCTGAATCCGGGGAAA+TGG | - | chr8.1:60595214-60595233 | MS.gene77799:intron | 55.0% | |
AGTACCACTGCTAGCCGAAG+AGG | + | chr8.1:60595525-60595544 | None:intergenic | 55.0% | |
CTAGCCGAAGAGGAAGGTGA+TGG | + | chr8.1:60595515-60595534 | None:intergenic | 55.0% | |
CTTACGTTCTGGCCGAACTC+CGG | - | chr8.1:60594110-60594129 | MS.gene77799:CDS | 55.0% | |
GGCATACAGCCCCAATACGA+AGG | + | chr8.1:60595434-60595453 | None:intergenic | 55.0% | |
GGGATAAGTCCATGGAGGAG+CGG | + | chr8.1:60595330-60595349 | None:intergenic | 55.0% | |
!! | CAGAGGTATTGGACAGCTGG+TGG | - | chr8.1:60594951-60594970 | MS.gene77799:intron | 55.0% |
!! | CTACGCTTACCGGCTCCAAT+AGG | + | chr8.1:60594993-60595012 | None:intergenic | 55.0% |
!! | GGGAAGGCGTTCCAGTAATC+CGG | + | chr8.1:60594132-60594151 | None:intergenic | 55.0% |
CCACTGCTAGCCGAAGAGGA+AGG | + | chr8.1:60595521-60595540 | None:intergenic | 60.0% | |
CCTTCCTCTTCGGCTAGCAG+TGG | - | chr8.1:60595518-60595537 | MS.gene77799:intron | 60.0% | |
CGCCTTCCCTTAGGAACCAG+AGG | - | chr8.1:60594143-60594162 | MS.gene77799:CDS | 60.0% | |
CGGAGCGAGAGAAAGCAGCA+GGG | + | chr8.1:60595814-60595833 | None:intergenic | 60.0% | |
CTCTCGCTCCGGATCCTTTC+AGG | - | chr8.1:60595823-60595842 | MS.gene77799:CDS | 60.0% | |
CTGGCCGAACTCCGGATTAC+TGG | - | chr8.1:60594118-60594137 | MS.gene77799:CDS | 60.0% | |
GGACACGGCAGAACCTTGTC+TGG | + | chr8.1:60594849-60594868 | None:intergenic | 60.0% | |
!! | CCTGCTGCTTTCTCTCGCTC+CGG | - | chr8.1:60595812-60595831 | MS.gene77799:CDS | 60.0% |
CCGGAGCGAGAGAAAGCAGC+AGG | + | chr8.1:60595815-60595834 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 60593376 | 60595856 | 60593376 | ID=MS.gene77799 |
chr8.1 | mRNA | 60593376 | 60595856 | 60593376 | ID=MS.gene77799.t1;Parent=MS.gene77799 |
chr8.1 | exon | 60595728 | 60595856 | 60595728 | ID=MS.gene77799.t1.exon1;Parent=MS.gene77799.t1 |
chr8.1 | CDS | 60595728 | 60595856 | 60595728 | ID=cds.MS.gene77799.t1;Parent=MS.gene77799.t1 |
chr8.1 | exon | 60593376 | 60594596 | 60593376 | ID=MS.gene77799.t1.exon2;Parent=MS.gene77799.t1 |
chr8.1 | CDS | 60593376 | 60594596 | 60593376 | ID=cds.MS.gene77799.t1;Parent=MS.gene77799.t1 |
Gene Sequence |
Protein sequence |