Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78289.t1 | GAU33477.1 | 38.2 | 524 | 272 | 12 | 5 | 483 | 12 | 528 | 5.10E-77 | 298.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78289.t1 | Q9SZL8 | 31.7 | 259 | 167 | 6 | 4 | 254 | 35 | 291 | 5.2e-22 | 107.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78289.t1 | A0A2Z6NTS8 | 38.2 | 524 | 272 | 12 | 5 | 483 | 12 | 528 | 3.7e-77 | 298.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene78289.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78289.t1 | MTR_7g446520 | 39.655 | 232 | 115 | 3 | 6 | 228 | 47 | 262 | 1.27e-44 | 161 |
| MS.gene78289.t1 | MTR_7g446480 | 50.000 | 116 | 58 | 0 | 113 | 228 | 140 | 255 | 2.48e-32 | 127 |
| MS.gene78289.t1 | MTR_8g035530 | 77.632 | 76 | 16 | 1 | 28 | 102 | 1 | 76 | 3.18e-32 | 119 |
| MS.gene78289.t1 | MTR_7g028855 | 42.763 | 152 | 82 | 1 | 33 | 179 | 112 | 263 | 1.79e-30 | 124 |
| MS.gene78289.t1 | MTR_7g446510 | 49.138 | 116 | 59 | 0 | 113 | 228 | 155 | 270 | 1.87e-30 | 122 |
| MS.gene78289.t1 | MTR_5g076070 | 28.502 | 207 | 139 | 4 | 38 | 237 | 50 | 254 | 3.04e-26 | 108 |
| MS.gene78289.t1 | MTR_1g070355 | 30.769 | 195 | 126 | 3 | 41 | 229 | 74 | 265 | 4.15e-24 | 107 |
| MS.gene78289.t1 | MTR_3g080590 | 53.488 | 86 | 40 | 0 | 5 | 90 | 69 | 154 | 8.40e-24 | 98.6 |
| MS.gene78289.t1 | MTR_6g022080 | 28.824 | 170 | 116 | 1 | 34 | 198 | 78 | 247 | 2.88e-21 | 94.0 |
| MS.gene78289.t1 | MTR_6g051425 | 26.761 | 213 | 147 | 3 | 40 | 244 | 16 | 227 | 2.13e-20 | 93.2 |
| MS.gene78289.t1 | MTR_0402s0040 | 30.233 | 172 | 115 | 3 | 45 | 212 | 30 | 200 | 6.77e-17 | 84.0 |
| MS.gene78289.t1 | MTR_7g061980 | 34.862 | 109 | 65 | 2 | 44 | 148 | 13 | 119 | 1.13e-13 | 68.2 |
| MS.gene78289.t1 | MTR_5g015480 | 32.061 | 131 | 82 | 3 | 45 | 168 | 60 | 190 | 1.94e-13 | 71.2 |
| MS.gene78289.t1 | MTR_1g008290 | 29.197 | 137 | 86 | 3 | 81 | 217 | 1 | 126 | 3.43e-13 | 67.8 |
| MS.gene78289.t1 | MTR_4g067290 | 35.000 | 100 | 63 | 2 | 44 | 141 | 59 | 158 | 3.50e-13 | 69.7 |
| MS.gene78289.t1 | MTR_4g067290 | 35.000 | 100 | 63 | 2 | 44 | 141 | 59 | 158 | 3.52e-13 | 69.7 |
| MS.gene78289.t1 | MTR_4g067290 | 35.000 | 100 | 63 | 2 | 44 | 141 | 77 | 176 | 5.26e-13 | 69.7 |
| MS.gene78289.t1 | MTR_4g067290 | 35.000 | 100 | 63 | 2 | 44 | 141 | 79 | 178 | 5.36e-13 | 69.7 |
| MS.gene78289.t1 | MTR_4g067290 | 35.000 | 100 | 63 | 2 | 44 | 141 | 79 | 178 | 5.67e-13 | 69.7 |
| MS.gene78289.t1 | MTR_4g067290 | 35.000 | 100 | 63 | 2 | 44 | 141 | 119 | 218 | 8.28e-13 | 69.7 |
| MS.gene78289.t1 | MTR_2g098920 | 34.579 | 107 | 68 | 2 | 39 | 143 | 78 | 184 | 3.58e-12 | 67.4 |
| MS.gene78289.t1 | MTR_7g074790 | 27.950 | 161 | 92 | 3 | 44 | 200 | 13 | 153 | 1.76e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78289.t1 | AT4G38180 | 34.894 | 235 | 141 | 8 | 2 | 226 | 32 | 264 | 1.76e-23 | 105 |
| MS.gene78289.t1 | AT3G07500 | 37.692 | 130 | 70 | 4 | 22 | 141 | 8 | 136 | 7.59e-16 | 77.4 |
| MS.gene78289.t1 | AT3G59470 | 34.579 | 107 | 68 | 2 | 39 | 143 | 68 | 174 | 2.91e-12 | 67.4 |
| MS.gene78289.t1 | AT3G59470 | 34.579 | 107 | 68 | 2 | 39 | 143 | 68 | 174 | 2.91e-12 | 67.4 |
| MS.gene78289.t1 | AT3G59470 | 34.579 | 107 | 68 | 2 | 39 | 143 | 80 | 186 | 3.31e-12 | 67.4 |
| MS.gene78289.t1 | AT1G10240 | 29.518 | 166 | 108 | 5 | 44 | 200 | 51 | 216 | 7.33e-12 | 68.9 |
| MS.gene78289.t1 | AT1G10240 | 29.518 | 166 | 108 | 5 | 44 | 200 | 51 | 216 | 7.33e-12 | 68.9 |
| MS.gene78289.t1 | AT5G18960 | 41.237 | 97 | 45 | 3 | 44 | 139 | 46 | 131 | 9.91e-12 | 68.6 |
| MS.gene78289.t1 | AT5G18960 | 41.237 | 97 | 45 | 3 | 44 | 139 | 46 | 131 | 9.91e-12 | 68.6 |
| MS.gene78289.t1 | AT4G12850 | 37.391 | 115 | 67 | 3 | 39 | 152 | 9 | 119 | 1.35e-11 | 63.2 |
| MS.gene78289.t1 | AT4G12850 | 39.216 | 102 | 60 | 2 | 39 | 139 | 9 | 109 | 3.06e-11 | 62.0 |
| MS.gene78289.t1 | AT4G12850 | 36.752 | 117 | 69 | 3 | 44 | 156 | 14 | 129 | 8.97e-11 | 61.6 |
Find 120 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTAATAAGTGGAGAGTTTC+TGG | 0.119642 | 6.4:+56509916 | MS.gene78289:CDS |
| TGTTAGAACCTGTCATATTT+TGG | 0.145212 | 6.4:+56510056 | MS.gene78289:CDS |
| GTAATCATCCTTTGCTGATT+TGG | 0.196309 | 6.4:-56511815 | None:intergenic |
| CATCTTTCCATGTTACATTT+TGG | 0.217563 | 6.4:-56512720 | None:intergenic |
| GCAGACACTGTCCTGCAATT+TGG | 0.218987 | 6.4:-56513762 | None:intergenic |
| AGTTGTCTGCTCGTGGAAAT+TGG | 0.230194 | 6.4:-56512882 | None:intergenic |
| GAATTTGATTCAGAGGAAAA+AGG | 0.258407 | 6.4:+56509685 | MS.gene78289:CDS |
| AAAGTAGATGCAATTTGATT+TGG | 0.270824 | 6.4:-56512820 | None:intergenic |
| AACTCATTATCATGTCCTTT+TGG | 0.270857 | 6.4:+56513679 | MS.gene78289:CDS |
| CAGACACTGTCCTGCAATTT+GGG | 0.276633 | 6.4:-56513761 | None:intergenic |
| AAAATTGATGCACCTTGATT+TGG | 0.276898 | 6.4:-56512856 | None:intergenic |
| TCACTCAATTGACGGTTCTT+AGG | 0.285255 | 6.4:-56509994 | None:intergenic |
| AAGACCAATCCATCTGTTAT+TGG | 0.288862 | 6.4:+56512030 | MS.gene78289:CDS |
| TTGGCGCCTGTAAAATAATT+AGG | 0.301126 | 6.4:-56512757 | None:intergenic |
| CATTCAAGTTCTGTTGGATA+TGG | 0.304475 | 6.4:+56512913 | MS.gene78289:CDS |
| CCTTTGGCCTTGGCTTTGAT+AGG | 0.324333 | 6.4:-56512057 | None:intergenic |
| GTTGTCTGCTCGTGGAAATT+GGG | 0.345810 | 6.4:-56512881 | None:intergenic |
| ACGAGGGGCACCTTTGGCCT+TGG | 0.345904 | 6.4:-56512067 | None:intergenic |
| TGAAGAAGGAAAAGAGGATA+TGG | 0.353695 | 6.4:+56509612 | MS.gene78289:CDS |
| TGGATACTTACAAGAAGATT+AGG | 0.354642 | 6.4:+56509632 | MS.gene78289:CDS |
| TCCAACCCGTTATGCTCATT+TGG | 0.356553 | 6.4:+56509969 | MS.gene78289:CDS |
| TGCTGCGTTGAGTTATTTGC+AGG | 0.361206 | 6.4:+56510191 | MS.gene78289:CDS |
| GAAAGGAGGTCATGAGAGTC+TGG | 0.365097 | 6.4:+56510095 | MS.gene78289:CDS |
| ATAGCCTCTTTATAATCATC+TGG | 0.369789 | 6.4:-56511946 | None:intergenic |
| AGACATAAATGGTGAAGATT+TGG | 0.373826 | 6.4:+56509567 | MS.gene78289:CDS |
| GCAATTTGATTTGGAAATTG+AGG | 0.377041 | 6.4:-56512811 | None:intergenic |
| CTTCTTACGAGGGGCACCTT+TGG | 0.378868 | 6.4:-56512073 | None:intergenic |
| AAGATCGGAACACTTTGAAT+TGG | 0.379246 | 6.4:-56512787 | None:intergenic |
| TCTGATAAAGCCTTTGTTGA+TGG | 0.383586 | 6.4:+56510018 | MS.gene78289:CDS |
| CCCACAGTTGCCCAAATTGC+AGG | 0.386706 | 6.4:+56513751 | MS.gene78289:CDS |
| GCAAACGATGGAGACATAAA+TGG | 0.387588 | 6.4:+56509556 | MS.gene78289:CDS |
| ACATCACGTCCAGCTAGTTC+TGG | 0.392972 | 6.4:-56512165 | None:intergenic |
| TGCAGCTTGTCATGGGTTTG+TGG | 0.439020 | 6.4:+56509729 | MS.gene78289:CDS |
| TATCAGATTCACTCAATTGA+CGG | 0.439464 | 6.4:-56510002 | None:intergenic |
| CCATCACATTCAAGTTCTGT+TGG | 0.440650 | 6.4:+56512907 | MS.gene78289:CDS |
| GAAGGAAAGGCAAGAATAGA+AGG | 0.447532 | 6.4:+56510156 | MS.gene78289:CDS |
| CAATTTGGGCAACTGTGGGA+TGG | 0.454366 | 6.4:-56513747 | None:intergenic |
| AGAAGAAATCATCCAGGAAA+AGG | 0.463612 | 6.4:+56512094 | MS.gene78289:CDS |
| GGATACTTACAAGAAGATTA+GGG | 0.465987 | 6.4:+56509633 | MS.gene78289:CDS |
| CAAGAAGATTAGGGAATTGA+CGG | 0.467663 | 6.4:+56509642 | MS.gene78289:CDS |
| AGGAACCAAATGAGCATAAC+GGG | 0.471013 | 6.4:-56509974 | None:intergenic |
| CAATAAAAGAAGATCAAAAC+AGG | 0.473627 | 6.4:+56512412 | MS.gene78289:CDS |
| ATTTATGTCTCCATCGTTTG+CGG | 0.473976 | 6.4:-56509554 | None:intergenic |
| AATGGTGTGTTTAATGAAGA+AGG | 0.477078 | 6.4:+56509598 | MS.gene78289:CDS |
| GAAATCTATGCAGCTTGTCA+TGG | 0.477114 | 6.4:+56509721 | MS.gene78289:CDS |
| TAAATGTTGATACTAATAAG+TGG | 0.482914 | 6.4:+56509905 | MS.gene78289:CDS |
| TGTCAATGTTACTTCAATGC+AGG | 0.488636 | 6.4:+56512382 | MS.gene78289:CDS |
| GAAGATTTGGCCAGCGGTAA+TGG | 0.496494 | 6.4:+56509580 | MS.gene78289:CDS |
| GGATGATGATATAAGAGGAT+TGG | 0.496802 | 6.4:+56509663 | MS.gene78289:CDS |
| TTGACGGATGATGATATAAG+AGG | 0.497315 | 6.4:+56509658 | MS.gene78289:CDS |
| TATAACTACTTATACAATGA+AGG | 0.501991 | 6.4:+56510138 | MS.gene78289:CDS |
| ATGATAATGAGTTGGCCTAC+TGG | 0.506108 | 6.4:-56513669 | None:intergenic |
| TTTGGAAATTGAGGAAAGAT+CGG | 0.506335 | 6.4:-56512802 | None:intergenic |
| TCCTGCAATTTGGGCAACTG+TGG | 0.507825 | 6.4:-56513752 | None:intergenic |
| ATCACCAATAACAGATGGAT+TGG | 0.508027 | 6.4:-56512034 | None:intergenic |
| AGGATTGGAATTTGATTCAG+AGG | 0.508865 | 6.4:+56509678 | MS.gene78289:CDS |
| GATGTAAACAAAGATGATGA+TGG | 0.508994 | 6.4:+56509763 | MS.gene78289:CDS |
| GTTGATGGTCTTCACGCATA+CGG | 0.509901 | 6.4:+56510033 | MS.gene78289:CDS |
| TGCAGAACACTTAGTTCGAC+TGG | 0.514633 | 6.4:-56509866 | None:intergenic |
| AGATGATTATAAAGAGGCTA+TGG | 0.524840 | 6.4:+56511948 | MS.gene78289:CDS |
| AAAAGCCAATCTCATCCAAA+AGG | 0.525339 | 6.4:-56513694 | None:intergenic |
| AAATCTATGCAGCTTGTCAT+GGG | 0.526189 | 6.4:+56509722 | MS.gene78289:CDS |
| TTGTCTGCTCGTGGAAATTG+GGG | 0.529245 | 6.4:-56512880 | None:intergenic |
| AGAAACAAAGTACATATTCG+AGG | 0.529955 | 6.4:+56509839 | MS.gene78289:CDS |
| ACTTTGAATTGGAACACCGT+TGG | 0.530199 | 6.4:-56512776 | None:intergenic |
| GGGCAACTGTGGGATGGGTG+AGG | 0.532080 | 6.4:-56513741 | None:intergenic |
| GAAAGGCAAGAATAGAAGGT+GGG | 0.534127 | 6.4:+56510160 | MS.gene78289:CDS |
| CAACAGAACTTGAATGTGAT+GGG | 0.534436 | 6.4:-56512906 | None:intergenic |
| CAAAATGTAACATGGAAAGA+TGG | 0.535009 | 6.4:+56512721 | MS.gene78289:CDS |
| CCAACAGAACTTGAATGTGA+TGG | 0.535015 | 6.4:-56512907 | None:intergenic |
| ATTTAAATGGCCGCAAACGA+TGG | 0.539363 | 6.4:+56509544 | None:intergenic |
| AATTTGGGCAACTGTGGGAT+GGG | 0.541935 | 6.4:-56513746 | None:intergenic |
| TAGGAACCAAATGAGCATAA+CGG | 0.549503 | 6.4:-56509975 | None:intergenic |
| CATAAAACCCAAAATATGAC+AGG | 0.552239 | 6.4:-56510064 | None:intergenic |
| ACACCCAGATGATTATAAAG+AGG | 0.558171 | 6.4:+56511942 | MS.gene78289:CDS |
| AAAAGGACATGATAATGAGT+TGG | 0.562000 | 6.4:-56513677 | None:intergenic |
| AAAGGCAAGAATAGAAGGTG+GGG | 0.563747 | 6.4:+56510161 | MS.gene78289:CDS |
| ATTAAACACACCATTACCGC+TGG | 0.563951 | 6.4:-56509590 | None:intergenic |
| CCTGCAATTTGGGCAACTGT+GGG | 0.564136 | 6.4:-56513751 | None:intergenic |
| ATGATTTCTTCTTCTTACGA+GGG | 0.564434 | 6.4:-56512083 | None:intergenic |
| TGATTATAAAGAGGCTATGG+AGG | 0.565059 | 6.4:+56511951 | MS.gene78289:CDS |
| CAAAACTGTCCAGAACTAGC+TGG | 0.566062 | 6.4:+56512156 | MS.gene78289:CDS |
| GTTTAATGAAGAAGGAAAAG+AGG | 0.567512 | 6.4:+56509606 | MS.gene78289:CDS |
| ATAGGATCACCAATAACAGA+TGG | 0.568307 | 6.4:-56512039 | None:intergenic |
| GATGATTTCTTCTTCTTACG+AGG | 0.568426 | 6.4:-56512084 | None:intergenic |
| TAGCCTCTTTATAATCATCT+GGG | 0.570856 | 6.4:-56511945 | None:intergenic |
| TCTAAATGAAGTCAATGAAG+AGG | 0.571099 | 6.4:+56512188 | MS.gene78289:CDS |
| AACGGGTTGGAGTTAACTCA+TGG | 0.579913 | 6.4:-56509957 | None:intergenic |
| CTACTTATACAATGAAGGAA+AGG | 0.581665 | 6.4:+56510143 | MS.gene78289:CDS |
| AATGTCCAGAGTCAAGATCA+AGG | 0.583155 | 6.4:+56512661 | MS.gene78289:intron |
| ATGTAAACAAAGATGATGAT+GGG | 0.584402 | 6.4:+56509764 | MS.gene78289:CDS |
| AGTTAACTCATGGTTGTGTG+AGG | 0.591294 | 6.4:-56509947 | None:intergenic |
| GATTATAAAGAGGCTATGGA+GGG | 0.593735 | 6.4:+56511952 | MS.gene78289:CDS |
| GGAAAGGCAAGAATAGAAGG+TGG | 0.594681 | 6.4:+56510159 | MS.gene78289:CDS |
| ACCAAATGAGCATAACGGGT+TGG | 0.596668 | 6.4:-56509970 | None:intergenic |
| TCGATTAGTATGTAATAGAG+AGG | 0.600970 | 6.4:+56509801 | MS.gene78289:CDS |
| ATAAAGAGGCGTCGTGAGAG+TGG | 0.603066 | 6.4:+56511997 | MS.gene78289:CDS |
| GTTTGTGTGAGAAAATAAAG+AGG | 0.607012 | 6.4:+56511983 | MS.gene78289:CDS |
| CCTATCAAAGCCAAGGCCAA+AGG | 0.609665 | 6.4:+56512057 | MS.gene78289:CDS |
| TTTATGATGGCTCAGAAAGG+AGG | 0.609928 | 6.4:+56510081 | MS.gene78289:CDS |
| AAAGGAGGTCATGAGAGTCT+GGG | 0.612373 | 6.4:+56510096 | MS.gene78289:CDS |
| TGGAAGACCAAAATGTAACA+TGG | 0.612794 | 6.4:+56512713 | MS.gene78289:CDS |
| GTGTTGATAAGAGTTGTGAC+AGG | 0.616075 | 6.4:+56512342 | MS.gene78289:CDS |
| TACTCACAGGTGTATGATGA+GGG | 0.616777 | 6.4:-56512951 | None:intergenic |
| TGGTGATCCTATCAAAGCCA+AGG | 0.618217 | 6.4:+56512050 | MS.gene78289:CDS |
| GATGGGAAGTTGTCTGCTCG+TGG | 0.621816 | 6.4:-56512889 | None:intergenic |
| GTAAGAAGAAGAAATCATCC+AGG | 0.628639 | 6.4:+56512088 | MS.gene78289:CDS |
| GTTAACTCATGGTTGTGTGA+GGG | 0.630795 | 6.4:-56509946 | None:intergenic |
| TGATTTCTTCTTCTTACGAG+GGG | 0.631063 | 6.4:-56512082 | None:intergenic |
| CGATTAGTATGTAATAGAGA+GGG | 0.642038 | 6.4:+56509802 | MS.gene78289:CDS |
| ATACTCACAGGTGTATGATG+AGG | 0.644284 | 6.4:-56512952 | None:intergenic |
| AAGGTGGACCAAATCAGCAA+AGG | 0.645642 | 6.4:+56511807 | MS.gene78289:intron |
| ATTATAAAGAGGCTATGGAG+GGG | 0.655805 | 6.4:+56511953 | MS.gene78289:CDS |
| CAGTAGACATAGTTCCTCGA+CGG | 0.666039 | 6.4:-56511888 | None:intergenic |
| TATGTTCTCAGGGTACCAGT+AGG | 0.668100 | 6.4:+56513654 | MS.gene78289:intron |
| GTCGAACTAAGTGTTCTGCA+AGG | 0.675546 | 6.4:+56509869 | MS.gene78289:CDS |
| AATGGTGAAGATTTGGCCAG+CGG | 0.682068 | 6.4:+56509574 | MS.gene78289:CDS |
| TGCGTGAAGACCATCAACAA+AGG | 0.694308 | 6.4:-56510028 | None:intergenic |
| AAAATGTTCATGTTCCGTCG+AGG | 0.700917 | 6.4:+56511874 | MS.gene78289:CDS |
| TGTCTGCTCGTGGAAATTGG+GGG | 0.731356 | 6.4:-56512879 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAAGATAATAATTTTTC+GGG | + | chr6.4:56511361-56511380 | MS.gene78289:intron | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | - | chr6.4:56511409-56511428 | None:intergenic | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | - | chr6.4:56511410-56511429 | None:intergenic | 10.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | + | chr6.4:56511694-56511713 | MS.gene78289:intron | 15.0% |
| !!! | AAACTCTTTAATTTAATACT+CGG | + | chr6.4:56511257-56511276 | MS.gene78289:intron | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | - | chr6.4:56511333-56511352 | None:intergenic | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | + | chr6.4:56511295-56511314 | MS.gene78289:intron | 15.0% |
| !!! | TTGTTTATTTTTGTTGTTTT+AGG | + | chr6.4:56513241-56513260 | MS.gene78289:intron | 15.0% |
| !!! | TTTAGAAAATTTATTTTGGT+CGG | + | chr6.4:56510272-56510291 | MS.gene78289:intron | 15.0% |
| !! | AAAAATGTCAAAACAAACAT+TGG | - | chr6.4:56513211-56513230 | None:intergenic | 20.0% |
| !! | ATAATTAGCATAAATCAATG+AGG | - | chr6.4:56510664-56510683 | None:intergenic | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | - | chr6.4:56511721-56511740 | None:intergenic | 20.0% |
| !! | TAAATGTTGATACTAATAAG+TGG | + | chr6.4:56509905-56509924 | MS.gene78289:CDS | 20.0% |
| !! | TATAACTACTTATACAATGA+AGG | + | chr6.4:56510138-56510157 | MS.gene78289:CDS | 20.0% |
| !!! | AAGTTTAAGATGAATAGATT+TGG | + | chr6.4:56511124-56511143 | MS.gene78289:intron | 20.0% |
| !!! | AATTATAATTTGTTTGCACA+GGG | + | chr6.4:56512320-56512339 | MS.gene78289:intron | 20.0% |
| !!! | CTCTATTTATGTTAGTTTAT+GGG | + | chr6.4:56513044-56513063 | MS.gene78289:intron | 20.0% |
| !!! | GACGTTTAGAAAATTTATTT+TGG | + | chr6.4:56510268-56510287 | MS.gene78289:intron | 20.0% |
| !!! | TAATTATAATTTGTTTGCAC+AGG | + | chr6.4:56512319-56512338 | MS.gene78289:intron | 20.0% |
| !!! | TATGTTCCTAATTATTTTAC+AGG | + | chr6.4:56512751-56512770 | MS.gene78289:CDS | 20.0% |
| !!! | TCTCTATTTATGTTAGTTTA+TGG | + | chr6.4:56513043-56513062 | MS.gene78289:intron | 20.0% |
| !!! | TTAGAGTATTTAAAGTTTGA+AGG | + | chr6.4:56513385-56513404 | MS.gene78289:intron | 20.0% |
| ! | AAAACAAACATTGGAACAAA+TGG | - | chr6.4:56513202-56513221 | None:intergenic | 25.0% |
| ! | AAAATGGATAAGAATACATG+TGG | + | chr6.4:56513092-56513111 | MS.gene78289:intron | 25.0% |
| ! | AAAGAGTTTCTACTGTAATA+TGG | - | chr6.4:56511246-56511265 | None:intergenic | 25.0% |
| ! | AAAGTAGATGCAATTTGATT+TGG | - | chr6.4:56512823-56512842 | None:intergenic | 25.0% |
| ! | AAGAGTTTCTACTGTAATAT+GGG | - | chr6.4:56511245-56511264 | None:intergenic | 25.0% |
| ! | AATCAATTGAAAGTAACTTC+AGG | - | chr6.4:56513411-56513430 | None:intergenic | 25.0% |
| ! | AATTTGATTCAGAGGAAAAA+GGG | + | chr6.4:56509686-56509705 | MS.gene78289:CDS | 25.0% |
| ! | ACAATTTATCAGACAATACA+GGG | + | chr6.4:56510730-56510749 | MS.gene78289:intron | 25.0% |
| ! | ACTCAAAATTATCATCACTT+TGG | - | chr6.4:56513164-56513183 | None:intergenic | 25.0% |
| ! | AGTAGTTTCTCATAGTTAAT+TGG | + | chr6.4:56512581-56512600 | MS.gene78289:intron | 25.0% |
| ! | ATGTAAACAAAGATGATGAT+GGG | + | chr6.4:56509764-56509783 | MS.gene78289:CDS | 25.0% |
| ! | CAATAAAAGAAGATCAAAAC+AGG | + | chr6.4:56512412-56512431 | MS.gene78289:CDS | 25.0% |
| ! | CACAACTAAATTAAGTATCA+TGG | - | chr6.4:56513630-56513649 | None:intergenic | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | - | chr6.4:56511716-56511735 | None:intergenic | 25.0% |
| ! | TACAATTTATCAGACAATAC+AGG | + | chr6.4:56510729-56510748 | MS.gene78289:intron | 25.0% |
| ! | TAGATTAAAAATGAAGGGAT+TGG | + | chr6.4:56512503-56512522 | MS.gene78289:intron | 25.0% |
| ! | TGCACTAGATTAAAAATGAA+GGG | + | chr6.4:56512498-56512517 | MS.gene78289:intron | 25.0% |
| ! | TTGCACTAGATTAAAAATGA+AGG | + | chr6.4:56512497-56512516 | MS.gene78289:intron | 25.0% |
| !! | GAAAATTCTTCCAAGAATTT+TGG | - | chr6.4:56510642-56510661 | None:intergenic | 25.0% |
| !!! | AAGATACTTGATACTTTTTG+TGG | + | chr6.4:56512441-56512460 | MS.gene78289:intron | 25.0% |
| !!! | TAATAGGTTTGTTAACCATA+TGG | + | chr6.4:56513551-56513570 | MS.gene78289:intron | 25.0% |
| !!! | TCATATTTTGGGTTTTATGA+TGG | + | chr6.4:56510068-56510087 | MS.gene78289:CDS | 25.0% |
| !!! | TTATCTGTCATGTTTTGATT+AGG | - | chr6.4:56512533-56512552 | None:intergenic | 25.0% |
| !!! | TTTGGTCTTCCATTTTAATA+GGG | - | chr6.4:56512705-56512724 | None:intergenic | 25.0% |
| !!! | TTTTGGTCTTCCATTTTAAT+AGG | - | chr6.4:56512706-56512725 | None:intergenic | 25.0% |
| AAAATTGATGCACCTTGATT+TGG | - | chr6.4:56512859-56512878 | None:intergenic | 30.0% | |
| AAATTATAGTTCCTCCATGA+TGG | - | chr6.4:56510407-56510426 | None:intergenic | 30.0% | |
| AAGCTTCAAAAATCTTTACG+AGG | + | chr6.4:56511017-56511036 | MS.gene78289:intron | 30.0% | |
| AATGGTGTGTTTAATGAAGA+AGG | + | chr6.4:56509598-56509617 | MS.gene78289:CDS | 30.0% | |
| ACTGCAATTATCTATTCCAA+TGG | - | chr6.4:56513482-56513501 | None:intergenic | 30.0% | |
| ACTGTACATACCAAACAAAA+AGG | - | chr6.4:56511614-56511633 | None:intergenic | 30.0% | |
| AGAAACAAAGTACATATTCG+AGG | + | chr6.4:56509839-56509858 | MS.gene78289:CDS | 30.0% | |
| AGACATAAATGGTGAAGATT+TGG | + | chr6.4:56509567-56509586 | MS.gene78289:CDS | 30.0% | |
| AGATGATTATAAAGAGGCTA+TGG | + | chr6.4:56511948-56511967 | MS.gene78289:CDS | 30.0% | |
| AGTTGTGAAAATATGTTCTC+AGG | + | chr6.4:56513643-56513662 | MS.gene78289:intron | 30.0% | |
| ATACAGGCACAAAAAGTTAA+TGG | + | chr6.4:56510931-56510950 | MS.gene78289:intron | 30.0% | |
| ATAGAGCTGTAAAAGAATAC+AGG | + | chr6.4:56510915-56510934 | MS.gene78289:intron | 30.0% | |
| ATAGCCTCTTTATAATCATC+TGG | - | chr6.4:56511949-56511968 | None:intergenic | 30.0% | |
| ATATGAGATGAAGACAATGT+GGG | + | chr6.4:56510763-56510782 | MS.gene78289:intron | 30.0% | |
| ATGATTTCTTCTTCTTACGA+GGG | - | chr6.4:56512086-56512105 | None:intergenic | 30.0% | |
| ATGTATCATAAACAGCCTAA+AGG | + | chr6.4:56510498-56510517 | MS.gene78289:intron | 30.0% | |
| ATTGAATCAGTTTAAGCCAT+TGG | + | chr6.4:56513463-56513482 | MS.gene78289:intron | 30.0% | |
| CAAAAACACATTTAACACGA+TGG | - | chr6.4:56512269-56512288 | None:intergenic | 30.0% | |
| CAAAATGTAACATGGAAAGA+TGG | + | chr6.4:56512721-56512740 | MS.gene78289:CDS | 30.0% | |
| CAACAGTTATAGCAACAAAT+AGG | - | chr6.4:56513282-56513301 | None:intergenic | 30.0% | |
| CACTATCATTTCAATCATCA+AGG | - | chr6.4:56513359-56513378 | None:intergenic | 30.0% | |
| CATAAAACCCAAAATATGAC+AGG | - | chr6.4:56510067-56510086 | None:intergenic | 30.0% | |
| CGATTAGTATGTAATAGAGA+GGG | + | chr6.4:56509802-56509821 | MS.gene78289:CDS | 30.0% | |
| CTACTTATACAATGAAGGAA+AGG | + | chr6.4:56510143-56510162 | MS.gene78289:CDS | 30.0% | |
| CTCAATTTCAAATTTGTCCA+CGG | - | chr6.4:56510688-56510707 | None:intergenic | 30.0% | |
| GAATTTGATTCAGAGGAAAA+AGG | + | chr6.4:56509685-56509704 | MS.gene78289:CDS | 30.0% | |
| GATGTAAACAAAGATGATGA+TGG | + | chr6.4:56509763-56509782 | MS.gene78289:CDS | 30.0% | |
| GATTGCAAATGAAAACCATA+TGG | - | chr6.4:56513569-56513588 | None:intergenic | 30.0% | |
| GATTTATGCTAATTATACCG+TGG | + | chr6.4:56510668-56510687 | MS.gene78289:intron | 30.0% | |
| GGATACTTACAAGAAGATTA+GGG | + | chr6.4:56509633-56509652 | MS.gene78289:CDS | 30.0% | |
| GTAAACTTCGAAAAGAACAT+TGG | - | chr6.4:56510234-56510253 | None:intergenic | 30.0% | |
| GTACAGTAAATGTAAACAAG+AGG | - | chr6.4:56511483-56511502 | None:intergenic | 30.0% | |
| GTTGTGAAAATATGTTCTCA+GGG | + | chr6.4:56513644-56513663 | MS.gene78289:intron | 30.0% | |
| GTTTAATGAAGAAGGAAAAG+AGG | + | chr6.4:56509606-56509625 | MS.gene78289:CDS | 30.0% | |
| GTTTGTGTGAGAAAATAAAG+AGG | + | chr6.4:56511983-56512002 | MS.gene78289:CDS | 30.0% | |
| TAACTGTTGAAAATCATGAG+TGG | + | chr6.4:56513293-56513312 | MS.gene78289:intron | 30.0% | |
| TAGCCTCTTTATAATCATCT+GGG | - | chr6.4:56511948-56511967 | None:intergenic | 30.0% | |
| TATCAGATTCACTCAATTGA+CGG | - | chr6.4:56510005-56510024 | None:intergenic | 30.0% | |
| TCGATTAGTATGTAATAGAG+AGG | + | chr6.4:56509801-56509820 | MS.gene78289:CDS | 30.0% | |
| TCTAAATGAAGTCAATGAAG+AGG | + | chr6.4:56512188-56512207 | MS.gene78289:CDS | 30.0% | |
| TGATAAACCCCCTATTAAAA+TGG | + | chr6.4:56512693-56512712 | MS.gene78289:CDS | 30.0% | |
| TGGATACTTACAAGAAGATT+AGG | + | chr6.4:56509632-56509651 | MS.gene78289:CDS | 30.0% | |
| TGTATCATAAACAGCCTAAA+GGG | + | chr6.4:56510499-56510518 | MS.gene78289:intron | 30.0% | |
| TGTGAAGAATCCAAAATTCT+TGG | + | chr6.4:56510629-56510648 | MS.gene78289:intron | 30.0% | |
| TTGGGACCGAAAATTATAAA+GGG | - | chr6.4:56511391-56511410 | None:intergenic | 30.0% | |
| TTTGGAAATTGAGGAAAGAT+CGG | - | chr6.4:56512805-56512824 | None:intergenic | 30.0% | |
| ! | AAAAGGACATGATAATGAGT+TGG | - | chr6.4:56513680-56513699 | None:intergenic | 30.0% |
| ! | AACTCATTATCATGTCCTTT+TGG | + | chr6.4:56513679-56513698 | MS.gene78289:CDS | 30.0% |
| ! | AATTTGAAATTGAGTGGAAG+AGG | + | chr6.4:56510694-56510713 | MS.gene78289:intron | 30.0% |
| ! | ATAGTCTAATTTGCAAAAGG+TGG | + | chr6.4:56511791-56511810 | MS.gene78289:intron | 30.0% |
| ! | ATTTGAAATTGAGTGGAAGA+GGG | + | chr6.4:56510695-56510714 | MS.gene78289:intron | 30.0% |
| ! | CATCTTTCCATGTTACATTT+TGG | - | chr6.4:56512723-56512742 | None:intergenic | 30.0% |
| ! | CATGGAGGAACTATAATTTT+TGG | + | chr6.4:56510408-56510427 | MS.gene78289:intron | 30.0% |
| ! | CTGATAGTCTAATTTGCAAA+AGG | + | chr6.4:56511788-56511807 | MS.gene78289:intron | 30.0% |
| ! | CTTTTGCAAATTAGACTATC+AGG | - | chr6.4:56511790-56511809 | None:intergenic | 30.0% |
| ! | GGAGATCCCTTTATAATTTT+CGG | + | chr6.4:56511382-56511401 | MS.gene78289:intron | 30.0% |
| ! | GTTAGAACCTGTCATATTTT+GGG | + | chr6.4:56510057-56510076 | MS.gene78289:CDS | 30.0% |
| ! | TGGACAAATTTGAAATTGAG+TGG | + | chr6.4:56510688-56510707 | MS.gene78289:intron | 30.0% |
| ! | TGTTAGAACCTGTCATATTT+TGG | + | chr6.4:56510056-56510075 | MS.gene78289:CDS | 30.0% |
| !! | ATAATTTTGAGTCGTGCAAA+AGG | + | chr6.4:56513172-56513191 | MS.gene78289:intron | 30.0% |
| !! | CCTTGATTTGGAAAAAATTG+TGG | - | chr6.4:56512847-56512866 | None:intergenic | 30.0% |
| !! | GACTAATTTGCCTTTTTGTT+TGG | + | chr6.4:56511601-56511620 | MS.gene78289:intron | 30.0% |
| !! | GCAATTTGATTTGGAAATTG+AGG | - | chr6.4:56512814-56512833 | None:intergenic | 30.0% |
| !! | TTGGTCTTCCATTTTAATAG+GGG | - | chr6.4:56512704-56512723 | None:intergenic | 30.0% |
| !!! | AAGCCTCTTGTTATTTTTTC+TGG | + | chr6.4:56510375-56510394 | MS.gene78289:intron | 30.0% |
| !!! | AGCCTCTTGTTATTTTTTCT+GGG | + | chr6.4:56510376-56510395 | MS.gene78289:intron | 30.0% |
| !!! | ATGCGAGAAAACTTTTTTTG+TGG | + | chr6.4:56510797-56510816 | MS.gene78289:intron | 30.0% |
| !!! | CCACAATTTTTTCCAAATCA+AGG | + | chr6.4:56512844-56512863 | MS.gene78289:CDS | 30.0% |
| AAAAGCCAATCTCATCCAAA+AGG | - | chr6.4:56513697-56513716 | None:intergenic | 35.0% | |
| AAATCTATGCAGCTTGTCAT+GGG | + | chr6.4:56509722-56509741 | MS.gene78289:CDS | 35.0% | |
| AAGACCAATCCATCTGTTAT+TGG | + | chr6.4:56512030-56512049 | MS.gene78289:CDS | 35.0% | |
| AAGATCGGAACACTTTGAAT+TGG | - | chr6.4:56512790-56512809 | None:intergenic | 35.0% | |
| AAGTTTACCACAACAGAAGA+AGG | + | chr6.4:56510246-56510265 | MS.gene78289:intron | 35.0% | |
| AATGAGAGAAGCTATCAAAG+AGG | + | chr6.4:56510545-56510564 | MS.gene78289:intron | 35.0% | |
| ACACCCAGATGATTATAAAG+AGG | + | chr6.4:56511942-56511961 | MS.gene78289:CDS | 35.0% | |
| ACAGATAAAAACATGCACAC+AGG | + | chr6.4:56512545-56512564 | MS.gene78289:CDS | 35.0% | |
| ACTAATAAGTGGAGAGTTTC+TGG | + | chr6.4:56509916-56509935 | MS.gene78289:CDS | 35.0% | |
| ACTACTGTGTTCATATGCAT+TGG | - | chr6.4:56511527-56511546 | None:intergenic | 35.0% | |
| AGAAGAAATCATCCAGGAAA+AGG | + | chr6.4:56512094-56512113 | MS.gene78289:CDS | 35.0% | |
| AGGATTGGAATTTGATTCAG+AGG | + | chr6.4:56509678-56509697 | MS.gene78289:CDS | 35.0% | |
| ATAGGATCACCAATAACAGA+TGG | - | chr6.4:56512042-56512061 | None:intergenic | 35.0% | |
| ATCACCAATAACAGATGGAT+TGG | - | chr6.4:56512037-56512056 | None:intergenic | 35.0% | |
| ATTATAAAGAGGCTATGGAG+GGG | + | chr6.4:56511953-56511972 | MS.gene78289:CDS | 35.0% | |
| ATTTATGTCTCCATCGTTTG+CGG | - | chr6.4:56509557-56509576 | None:intergenic | 35.0% | |
| CAACAGAACTTGAATGTGAT+GGG | - | chr6.4:56512909-56512928 | None:intergenic | 35.0% | |
| CAAGAAGATTAGGGAATTGA+CGG | + | chr6.4:56509642-56509661 | MS.gene78289:CDS | 35.0% | |
| CACCCAGAAAAAATAACAAG+AGG | - | chr6.4:56510381-56510400 | None:intergenic | 35.0% | |
| CATATGAGATGAAGACAATG+TGG | + | chr6.4:56510762-56510781 | MS.gene78289:intron | 35.0% | |
| CTAATTTACGTTGAGTCCAA+AGG | + | chr6.4:56511549-56511568 | MS.gene78289:intron | 35.0% | |
| CTTGGGACCGAAAATTATAA+AGG | - | chr6.4:56511392-56511411 | None:intergenic | 35.0% | |
| GATGATTTCTTCTTCTTACG+AGG | - | chr6.4:56512087-56512106 | None:intergenic | 35.0% | |
| GATGGAACGATTAGCAAAAA+TGG | + | chr6.4:56513076-56513095 | MS.gene78289:intron | 35.0% | |
| GATTATAAAGAGGCTATGGA+GGG | + | chr6.4:56511952-56511971 | MS.gene78289:CDS | 35.0% | |
| GGATGATGATATAAGAGGAT+TGG | + | chr6.4:56509663-56509682 | MS.gene78289:CDS | 35.0% | |
| GTAAGAAGAAGAAATCATCC+AGG | + | chr6.4:56512088-56512107 | MS.gene78289:CDS | 35.0% | |
| GTATCATAAACAGCCTAAAG+GGG | + | chr6.4:56510500-56510519 | MS.gene78289:intron | 35.0% | |
| GTGATTGTAGACAGTTTGAA+CGG | + | chr6.4:56511203-56511222 | MS.gene78289:intron | 35.0% | |
| TAGGAACCAAATGAGCATAA+CGG | - | chr6.4:56509978-56509997 | None:intergenic | 35.0% | |
| TCTACTGTAATATGGGAACA+TGG | - | chr6.4:56511238-56511257 | None:intergenic | 35.0% | |
| TCTGATAAAGCCTTTGTTGA+TGG | + | chr6.4:56510018-56510037 | MS.gene78289:CDS | 35.0% | |
| TGAAGAAGGAAAAGAGGATA+TGG | + | chr6.4:56509612-56509631 | MS.gene78289:CDS | 35.0% | |
| TGAATGTTGTGTATACTCAC+AGG | - | chr6.4:56512967-56512986 | None:intergenic | 35.0% | |
| TGATTATAAAGAGGCTATGG+AGG | + | chr6.4:56511951-56511970 | MS.gene78289:CDS | 35.0% | |
| TGATTTCTTCTTCTTACGAG+GGG | - | chr6.4:56512085-56512104 | None:intergenic | 35.0% | |
| TGGAAGACCAAAATGTAACA+TGG | + | chr6.4:56512713-56512732 | MS.gene78289:CDS | 35.0% | |
| TGTTGACAACAAAGTTACAC+AGG | + | chr6.4:56510984-56511003 | MS.gene78289:intron | 35.0% | |
| TTGGCGCCTGTAAAATAATT+AGG | - | chr6.4:56512760-56512779 | None:intergenic | 35.0% | |
| ! | AGTCTGATTGATTTCATGCA+TGG | + | chr6.4:56510887-56510906 | MS.gene78289:intron | 35.0% |
| ! | CATTCAAGTTCTGTTGGATA+TGG | + | chr6.4:56512913-56512932 | MS.gene78289:CDS | 35.0% |
| ! | CTTTTTGCGTGCAATTATCA+CGG | + | chr6.4:56513589-56513608 | MS.gene78289:intron | 35.0% |
| ! | GATTGACTATGAGTGTTTTG+GGG | + | chr6.4:56510308-56510327 | MS.gene78289:intron | 35.0% |
| ! | GGATTGACTATGAGTGTTTT+GGG | + | chr6.4:56510307-56510326 | MS.gene78289:intron | 35.0% |
| ! | GTAATCATCCTTTGCTGATT+TGG | - | chr6.4:56511818-56511837 | None:intergenic | 35.0% |
| ! | GTATCTAGTTCAGCTTGATA+AGG | + | chr6.4:56511162-56511181 | MS.gene78289:intron | 35.0% |
| ! | TGTAACTTTGTTGTCAACAC+AGG | - | chr6.4:56510983-56511002 | None:intergenic | 35.0% |
| ! | TGTCAATGTTACTTCAATGC+AGG | + | chr6.4:56512382-56512401 | MS.gene78289:CDS | 35.0% |
| ! | TTGACGGATGATGATATAAG+AGG | + | chr6.4:56509658-56509677 | MS.gene78289:CDS | 35.0% |
| !! | AATTATTTTACAGGCGCCAA+CGG | + | chr6.4:56512760-56512779 | MS.gene78289:CDS | 35.0% |
| !! | TGGTCTTCCATTTTAATAGG+GGG | - | chr6.4:56512703-56512722 | None:intergenic | 35.0% |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | - | chr6.4:56511323-56511342 | None:intergenic | 35.0% |
| AAAATGTTCATGTTCCGTCG+AGG | + | chr6.4:56511874-56511893 | MS.gene78289:CDS | 40.0% | |
| AAACACGTGAGACATACAAG+TGG | + | chr6.4:56510451-56510470 | MS.gene78289:intron | 40.0% | |
| AAAGGCAAGAATAGAAGGTG+GGG | + | chr6.4:56510161-56510180 | MS.gene78289:CDS | 40.0% | |
| AACTCTCGAATCACAAGCAA+TGG | + | chr6.4:56513129-56513148 | MS.gene78289:intron | 40.0% | |
| AATGTCCAGAGTCAAGATCA+AGG | + | chr6.4:56512661-56512680 | MS.gene78289:intron | 40.0% | |
| ACTCTCGAATCACAAGCAAT+GGG | + | chr6.4:56513130-56513149 | MS.gene78289:intron | 40.0% | |
| ACTTTGAATTGGAACACCGT+TGG | - | chr6.4:56512779-56512798 | None:intergenic | 40.0% | |
| AGGAACCAAATGAGCATAAC+GGG | - | chr6.4:56509977-56509996 | None:intergenic | 40.0% | |
| AGTTAACTCATGGTTGTGTG+AGG | - | chr6.4:56509950-56509969 | None:intergenic | 40.0% | |
| ATACTCACAGGTGTATGATG+AGG | - | chr6.4:56512955-56512974 | None:intergenic | 40.0% | |
| ATTAAACACACCATTACCGC+TGG | - | chr6.4:56509593-56509612 | None:intergenic | 40.0% | |
| ATTATGTTGCAGCGAACCTT+TGG | - | chr6.4:56511568-56511587 | None:intergenic | 40.0% | |
| CCAACAGAACTTGAATGTGA+TGG | - | chr6.4:56512910-56512929 | None:intergenic | 40.0% | |
| CGCTGCAACATAATTCTAAG+AGG | + | chr6.4:56511574-56511593 | MS.gene78289:intron | 40.0% | |
| CGTGATAATTGCACGCAAAA+AGG | - | chr6.4:56513591-56513610 | None:intergenic | 40.0% | |
| GAAAGGCAAGAATAGAAGGT+GGG | + | chr6.4:56510160-56510179 | MS.gene78289:CDS | 40.0% | |
| GAAATCTATGCAGCTTGTCA+TGG | + | chr6.4:56509721-56509740 | MS.gene78289:CDS | 40.0% | |
| GAAGGAAAGGCAAGAATAGA+AGG | + | chr6.4:56510156-56510175 | MS.gene78289:CDS | 40.0% | |
| GCAAACGATGGAGACATAAA+TGG | + | chr6.4:56509556-56509575 | MS.gene78289:CDS | 40.0% | |
| GTTAACTCATGGTTGTGTGA+GGG | - | chr6.4:56509949-56509968 | None:intergenic | 40.0% | |
| TAAACGTCCTTCTTCTGTTG+TGG | - | chr6.4:56510256-56510275 | None:intergenic | 40.0% | |
| TACTCACAGGTGTATGATGA+GGG | - | chr6.4:56512954-56512973 | None:intergenic | 40.0% | |
| TCACTCAATTGACGGTTCTT+AGG | - | chr6.4:56509997-56510016 | None:intergenic | 40.0% | |
| TCTGACCATGACAAAAACGT+TGG | + | chr6.4:56512225-56512244 | MS.gene78289:CDS | 40.0% | |
| TGACAAAAACGTTGGATGTG+AGG | + | chr6.4:56512233-56512252 | MS.gene78289:CDS | 40.0% | |
| TGTAGACAGTTTGAACGGAT+TGG | + | chr6.4:56511208-56511227 | MS.gene78289:intron | 40.0% | |
| TTGCTTGTGATTCGAGAGTT+TGG | - | chr6.4:56513129-56513148 | None:intergenic | 40.0% | |
| TTTATGATGGCTCAGAAAGG+AGG | + | chr6.4:56510081-56510100 | MS.gene78289:CDS | 40.0% | |
| ! | AGAACAATGTCTCCTTTTCC+TGG | - | chr6.4:56512109-56512128 | None:intergenic | 40.0% |
| ! | ATGATAATGAGTTGGCCTAC+TGG | - | chr6.4:56513672-56513691 | None:intergenic | 40.0% |
| ! | ATGTTAGTTTATGGGTGCCT+TGG | + | chr6.4:56513052-56513071 | MS.gene78289:intron | 40.0% |
| ! | CACATCCAACGTTTTTGTCA+TGG | - | chr6.4:56512233-56512252 | None:intergenic | 40.0% |
| ! | CATGTCCTTTTGGATGAGAT+TGG | + | chr6.4:56513689-56513708 | MS.gene78289:CDS | 40.0% |
| ! | CCATCACATTCAAGTTCTGT+TGG | + | chr6.4:56512907-56512926 | MS.gene78289:CDS | 40.0% |
| ! | CGGATTGACTATGAGTGTTT+TGG | + | chr6.4:56510306-56510325 | MS.gene78289:intron | 40.0% |
| ! | GTGTTGATAAGAGTTGTGAC+AGG | + | chr6.4:56512342-56512361 | MS.gene78289:CDS | 40.0% |
| ! | TTTTCTGGGTGTAACCATCA+TGG | + | chr6.4:56510390-56510409 | MS.gene78289:intron | 40.0% |
| ! | TTTTTACATTGGCCCAAGTC+GGG | - | chr6.4:56511322-56511341 | None:intergenic | 40.0% |
| !! | CTTTTTGAGCAGTCTAGTCT+CGG | + | chr6.4:56511091-56511110 | MS.gene78289:intron | 40.0% |
| !! | GGTTTTATGATGGCTCAGAA+AGG | + | chr6.4:56510078-56510097 | MS.gene78289:CDS | 40.0% |
| !!! | TTGGATGAGATTGGCTTTTC+TGG | + | chr6.4:56513698-56513717 | MS.gene78289:CDS | 40.0% |
| AAAGGAGGTCATGAGAGTCT+GGG | + | chr6.4:56510096-56510115 | MS.gene78289:CDS | 45.0% | |
| AAGGTGGACCAAATCAGCAA+AGG | + | chr6.4:56511807-56511826 | MS.gene78289:intron | 45.0% | |
| AATGGTGAAGATTTGGCCAG+CGG | + | chr6.4:56509574-56509593 | MS.gene78289:CDS | 45.0% | |
| AATTTGGGCAACTGTGGGAT+GGG | - | chr6.4:56513749-56513768 | None:intergenic | 45.0% | |
| ACACTCATAGTCAATCCGAC+TGG | - | chr6.4:56510304-56510323 | None:intergenic | 45.0% | |
| AGAACTACATCCAGGTGTGA+AGG | + | chr6.4:56510824-56510843 | MS.gene78289:intron | 45.0% | |
| AGTTGTCTGCTCGTGGAAAT+TGG | - | chr6.4:56512885-56512904 | None:intergenic | 45.0% | |
| CAAAACTGTCCAGAACTAGC+TGG | + | chr6.4:56512156-56512175 | MS.gene78289:CDS | 45.0% | |
| CAAAGACGATGCAACGAGTT+TGG | - | chr6.4:56510576-56510595 | None:intergenic | 45.0% | |
| CAGACACTGTCCTGCAATTT+GGG | - | chr6.4:56513764-56513783 | None:intergenic | 45.0% | |
| CAGTAGACATAGTTCCTCGA+CGG | - | chr6.4:56511891-56511910 | None:intergenic | 45.0% | |
| CGTTGCATCGTCTTTGTTCA+TGG | + | chr6.4:56510580-56510599 | MS.gene78289:intron | 45.0% | |
| GGAAAGGCAAGAATAGAAGG+TGG | + | chr6.4:56510159-56510178 | MS.gene78289:CDS | 45.0% | |
| GTCGAACTAAGTGTTCTGCA+AGG | + | chr6.4:56509869-56509888 | MS.gene78289:CDS | 45.0% | |
| GTGGCATAAGAACTACATCC+AGG | + | chr6.4:56510816-56510835 | MS.gene78289:intron | 45.0% | |
| GTTGTCTGCTCGTGGAAATT+GGG | - | chr6.4:56512884-56512903 | None:intergenic | 45.0% | |
| TCATAAACAGCCTAAAGGGG+TGG | + | chr6.4:56510503-56510522 | MS.gene78289:intron | 45.0% | |
| TCCAACCCGTTATGCTCATT+TGG | + | chr6.4:56509969-56509988 | MS.gene78289:CDS | 45.0% | |
| TGCAGAACACTTAGTTCGAC+TGG | - | chr6.4:56509869-56509888 | None:intergenic | 45.0% | |
| TGCGTGAAGACCATCAACAA+AGG | - | chr6.4:56510031-56510050 | None:intergenic | 45.0% | |
| TGCTAATCGTTCCATCTCCA+AGG | - | chr6.4:56513072-56513091 | None:intergenic | 45.0% | |
| TGCTGCGTTGAGTTATTTGC+AGG | + | chr6.4:56510191-56510210 | MS.gene78289:CDS | 45.0% | |
| TGGTGATCCTATCAAAGCCA+AGG | + | chr6.4:56512050-56512069 | MS.gene78289:CDS | 45.0% | |
| TTGTCTGCTCGTGGAAATTG+GGG | - | chr6.4:56512883-56512902 | None:intergenic | 45.0% | |
| TTTGGTCGGATTCAACCAGT+CGG | + | chr6.4:56510286-56510305 | MS.gene78289:intron | 45.0% | |
| ! | TATGTTCTCAGGGTACCAGT+AGG | + | chr6.4:56513654-56513673 | MS.gene78289:intron | 45.0% |
| !! | AACGGGTTGGAGTTAACTCA+TGG | - | chr6.4:56509960-56509979 | None:intergenic | 45.0% |
| !! | ACCAAATGAGCATAACGGGT+TGG | - | chr6.4:56509973-56509992 | None:intergenic | 45.0% |
| !! | ATGAGAGTCTGGGATTTTGC+AGG | + | chr6.4:56510106-56510125 | MS.gene78289:CDS | 45.0% |
| !! | GTTGATGGTCTTCACGCATA+CGG | + | chr6.4:56510033-56510052 | MS.gene78289:CDS | 45.0% |
| !!! | CTATGAGTGTTTTGGGGATG+TGG | + | chr6.4:56510314-56510333 | MS.gene78289:intron | 45.0% |
| !!! | GAGATTGGCTTTTCTGGTAG+CGG | + | chr6.4:56513704-56513723 | MS.gene78289:CDS | 45.0% |
| !!! | ATAATAAGATAATAATTTTT+CGG | + | chr6.4:56511360-56511379 | MS.gene78289:intron | 5.0% |
| AAATTTGTCCGGTCCCGACT+TGG | + | chr6.4:56511306-56511325 | MS.gene78289:intron | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | + | chr6.4:56511307-56511326 | MS.gene78289:intron | 50.0% | |
| ACATCACGTCCAGCTAGTTC+TGG | - | chr6.4:56512168-56512187 | None:intergenic | 50.0% | |
| AGTCATGTGCTCGTGTCTCA+TGG | - | chr6.4:56511761-56511780 | None:intergenic | 50.0% | |
| CAATTTGGGCAACTGTGGGA+TGG | - | chr6.4:56513750-56513769 | None:intergenic | 50.0% | |
| CAGCACCTTGATCTTGACTC+TGG | - | chr6.4:56512669-56512688 | None:intergenic | 50.0% | |
| CCATCAGTAACCACCCCTTT+AGG | - | chr6.4:56510516-56510535 | None:intergenic | 50.0% | |
| CCTAAAGGGGTGGTTACTGA+TGG | + | chr6.4:56510513-56510532 | MS.gene78289:intron | 50.0% | |
| CCTATCAAAGCCAAGGCCAA+AGG | + | chr6.4:56512057-56512076 | MS.gene78289:CDS | 50.0% | |
| CCTGCAATTTGGGCAACTGT+GGG | - | chr6.4:56513754-56513773 | None:intergenic | 50.0% | |
| CGAGTTTATGCCTTCACACC+TGG | - | chr6.4:56510837-56510856 | None:intergenic | 50.0% | |
| GAAAGGAGGTCATGAGAGTC+TGG | + | chr6.4:56510095-56510114 | MS.gene78289:CDS | 50.0% | |
| GAAGATTTGGCCAGCGGTAA+TGG | + | chr6.4:56509580-56509599 | MS.gene78289:CDS | 50.0% | |
| GCAGACACTGTCCTGCAATT+TGG | - | chr6.4:56513765-56513784 | None:intergenic | 50.0% | |
| GTTTATGGGTGCCTTGGAGA+TGG | + | chr6.4:56513058-56513077 | MS.gene78289:intron | 50.0% | |
| TCCTGCAATTTGGGCAACTG+TGG | - | chr6.4:56513755-56513774 | None:intergenic | 50.0% | |
| TCTGGGTGTAACCATCATGG+AGG | + | chr6.4:56510393-56510412 | MS.gene78289:intron | 50.0% | |
| TGCAGCTTGTCATGGGTTTG+TGG | + | chr6.4:56509729-56509748 | MS.gene78289:CDS | 50.0% | |
| TGTCTGCTCGTGGAAATTGG+GGG | - | chr6.4:56512882-56512901 | None:intergenic | 50.0% | |
| !! | ATAAAGAGGCGTCGTGAGAG+TGG | + | chr6.4:56511997-56512016 | MS.gene78289:CDS | 50.0% |
| !! | CCTTTGGCCTTGGCTTTGAT+AGG | - | chr6.4:56512060-56512079 | None:intergenic | 50.0% |
| !! | GAGTCTGGGATTTTGCAGGA+AGG | + | chr6.4:56510110-56510129 | MS.gene78289:CDS | 50.0% |
| CCCACAGTTGCCCAAATTGC+AGG | + | chr6.4:56513751-56513770 | MS.gene78289:CDS | 55.0% | |
| GATGGGAAGTTGTCTGCTCG+TGG | - | chr6.4:56512892-56512911 | None:intergenic | 55.0% | |
| !! | CTTCTTACGAGGGGCACCTT+TGG | - | chr6.4:56512076-56512095 | None:intergenic | 55.0% |
| ACATTGGCCCAAGTCGGGAC+CGG | - | chr6.4:56511317-56511336 | None:intergenic | 60.0% | |
| GGGCAACTGTGGGATGGGTG+AGG | - | chr6.4:56513744-56513763 | None:intergenic | 65.0% | |
| !! | ACGAGGGGCACCTTTGGCCT+TGG | - | chr6.4:56512070-56512089 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 56509550 | 56513805 | 56509550 | ID=MS.gene78289 |
| chr6.4 | mRNA | 56509550 | 56513805 | 56509550 | ID=MS.gene78289.t1;Parent=MS.gene78289 |
| chr6.4 | exon | 56509550 | 56510235 | 56509550 | ID=MS.gene78289.t1.exon1;Parent=MS.gene78289.t1 |
| chr6.4 | CDS | 56509550 | 56510235 | 56509550 | ID=cds.MS.gene78289.t1;Parent=MS.gene78289.t1 |
| chr6.4 | exon | 56511810 | 56512254 | 56511810 | ID=MS.gene78289.t1.exon2;Parent=MS.gene78289.t1 |
| chr6.4 | CDS | 56511810 | 56512254 | 56511810 | ID=cds.MS.gene78289.t1;Parent=MS.gene78289.t1 |
| chr6.4 | exon | 56512341 | 56512433 | 56512341 | ID=MS.gene78289.t1.exon3;Parent=MS.gene78289.t1 |
| chr6.4 | CDS | 56512341 | 56512433 | 56512341 | ID=cds.MS.gene78289.t1;Parent=MS.gene78289.t1 |
| chr6.4 | exon | 56512506 | 56512577 | 56512506 | ID=MS.gene78289.t1.exon4;Parent=MS.gene78289.t1 |
| chr6.4 | CDS | 56512506 | 56512577 | 56512506 | ID=cds.MS.gene78289.t1;Parent=MS.gene78289.t1 |
| chr6.4 | exon | 56512670 | 56512966 | 56512670 | ID=MS.gene78289.t1.exon5;Parent=MS.gene78289.t1 |
| chr6.4 | CDS | 56512670 | 56512966 | 56512670 | ID=cds.MS.gene78289.t1;Parent=MS.gene78289.t1 |
| chr6.4 | exon | 56513665 | 56513805 | 56513665 | ID=MS.gene78289.t1.exon6;Parent=MS.gene78289.t1 |
| chr6.4 | CDS | 56513665 | 56513805 | 56513665 | ID=cds.MS.gene78289.t1;Parent=MS.gene78289.t1 |
| Gene Sequence |
| Protein sequence |
