Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78665.t1 | XP_004511180.1 | 56.5 | 315 | 116 | 7 | 3 | 310 | 37 | 337 | 1.30E-88 | 337.4 |
| MS.gene78665.t1 | XP_004511180.1 | 59.6 | 52 | 21 | 0 | 540 | 591 | 394 | 445 | 4.20E-10 | 76.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78665.t1 | Q10M41 | 51.7 | 271 | 122 | 5 | 18 | 287 | 120 | 382 | 1.5e-69 | 265.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78665.t1 | A0A1S2YWS8 | 56.5 | 315 | 116 | 7 | 3 | 310 | 37 | 337 | 9.6e-89 | 337.4 |
| MS.gene78665.t1 | A0A1S2YWS8 | 59.6 | 52 | 21 | 0 | 540 | 591 | 394 | 445 | 3.0e-10 | 76.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene78665.t1 | TF | EIL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78665.t1 | MTR_5g087790 | 48.601 | 286 | 124 | 5 | 4 | 277 | 60 | 334 | 5.34e-82 | 269 |
| MS.gene78665.t1 | MTR_3g078770 | 48.601 | 286 | 121 | 7 | 6 | 279 | 65 | 336 | 4.59e-79 | 262 |
| MS.gene78665.t1 | MTR_2g098470 | 44.147 | 299 | 138 | 6 | 4 | 289 | 60 | 342 | 3.63e-72 | 243 |
| MS.gene78665.t1 | MTR_6g460640 | 45.833 | 240 | 124 | 2 | 1 | 240 | 54 | 287 | 3.11e-70 | 239 |
| MS.gene78665.t1 | MTR_3g087530 | 46.281 | 242 | 119 | 4 | 12 | 250 | 57 | 290 | 4.83e-70 | 233 |
| MS.gene78665.t1 | MTR_6g060600 | 45.417 | 240 | 125 | 2 | 1 | 240 | 54 | 287 | 9.26e-69 | 235 |
| MS.gene78665.t1 | MTR_8g091370 | 46.053 | 228 | 117 | 4 | 17 | 243 | 52 | 274 | 9.99e-65 | 219 |
| MS.gene78665.t1 | MTR_3g010790 | 42.308 | 260 | 134 | 6 | 38 | 292 | 1 | 249 | 8.15e-62 | 213 |
| MS.gene78665.t1 | MTR_7g095580 | 76.238 | 101 | 24 | 0 | 27 | 127 | 1 | 101 | 4.86e-47 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78665.t1 | AT3G20770 | 48.929 | 280 | 126 | 5 | 4 | 274 | 60 | 331 | 3.24e-81 | 268 |
| MS.gene78665.t1 | AT2G27050 | 51.417 | 247 | 104 | 4 | 4 | 240 | 60 | 300 | 1.72e-78 | 259 |
| MS.gene78665.t1 | AT1G73730 | 46.296 | 270 | 124 | 5 | 23 | 284 | 67 | 323 | 1.25e-69 | 235 |
| MS.gene78665.t1 | AT1G73730 | 45.620 | 274 | 128 | 5 | 19 | 284 | 75 | 335 | 1.34e-69 | 235 |
| MS.gene78665.t1 | AT5G10120 | 47.556 | 225 | 114 | 2 | 20 | 244 | 59 | 279 | 1.98e-68 | 229 |
| MS.gene78665.t1 | AT5G21120 | 45.076 | 264 | 126 | 6 | 20 | 273 | 87 | 341 | 2.16e-66 | 225 |
| MS.gene78665.t1 | AT5G21120 | 45.076 | 264 | 126 | 6 | 20 | 273 | 87 | 341 | 2.16e-66 | 225 |
| MS.gene78665.t1 | AT5G21120 | 45.076 | 264 | 126 | 6 | 20 | 273 | 94 | 348 | 2.39e-66 | 226 |
| MS.gene78665.t1 | AT5G65100 | 46.667 | 225 | 113 | 3 | 19 | 242 | 88 | 306 | 1.16e-64 | 222 |
Find 141 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTACCTCAATCTGCTAATT+TGG | 0.151109 | 8.4:+56633853 | MS.gene78665:CDS |
| CCTAGCTGGGTTTCATTCTT+TGG | 0.171554 | 8.4:+56633997 | MS.gene78665:CDS |
| GGAAACAAATCCAAACATTT+TGG | 0.194985 | 8.4:-56633791 | None:intergenic |
| AACAGGTTTCCTTTAGAAAA+AGG | 0.204240 | 8.4:+56632723 | MS.gene78665:intron |
| CGGTTCCATGGACACTTTCT+TGG | 0.205051 | 8.4:-56633472 | None:intergenic |
| CATTGAATTTGAATATTTCT+TGG | 0.208852 | 8.4:-56631705 | None:intergenic |
| GGACTTCATTATAATGTTAA+TGG | 0.231962 | 8.4:+56631676 | MS.gene78665:CDS |
| GAATATAAGCATGGGTATTA+TGG | 0.267844 | 8.4:+56631390 | None:intergenic |
| ACCATGTTGCTTTCATTTGC+TGG | 0.269080 | 8.4:-56633545 | None:intergenic |
| GGCCTAATAACCTTGTTTCT+TGG | 0.269096 | 8.4:-56633896 | None:intergenic |
| ACCATGTTGCTTCCATTTGC+TGG | 0.285782 | 8.4:-56633683 | None:intergenic |
| TGTACGTACCTTCTTTGATT+TGG | 0.287101 | 8.4:-56631820 | None:intergenic |
| TCCACCTCATTGTGTTGATT+TGG | 0.292463 | 8.4:+56633160 | MS.gene78665:CDS |
| CATTTGGATTTGTTTCCATT+TGG | 0.311773 | 8.4:+56633728 | MS.gene78665:CDS |
| CCTTACAGAAATAATTCTTC+TGG | 0.314917 | 8.4:+56634049 | MS.gene78665:CDS |
| CAATAACCAACCAAAATGTT+TGG | 0.318257 | 8.4:+56633781 | MS.gene78665:CDS |
| AGATCATGAGGTTTCCTATA+GGG | 0.321543 | 8.4:-56632825 | None:intergenic |
| TTGCTTTCATTTGCTGGAAA+TGG | 0.328902 | 8.4:-56633539 | None:intergenic |
| CAATAATCAATGTCAACATT+TGG | 0.329717 | 8.4:+56633712 | MS.gene78665:CDS |
| CCAACCTCAACAATTGGATT+TGG | 0.333661 | 8.4:+56633580 | MS.gene78665:CDS |
| TTGCTTCCATTTGCTGGAAA+TGG | 0.337238 | 8.4:-56633677 | None:intergenic |
| AGAGCTAGGTACGTGGTTAC+TGG | 0.338068 | 8.4:+56633932 | MS.gene78665:CDS |
| TTCTGTAAGGACAATTCATT+TGG | 0.339985 | 8.4:-56634036 | None:intergenic |
| ACCATGGTGCTTCCATTTGA+TGG | 0.342571 | 8.4:-56633407 | None:intergenic |
| TATGATGTTGATGGAAATAA+TGG | 0.343859 | 8.4:+56633101 | MS.gene78665:CDS |
| CCAACCTCAATGTATGGATT+TGG | 0.345365 | 8.4:+56633304 | MS.gene78665:CDS |
| CCAACCTCAATGTATGGATT+TGG | 0.345365 | 8.4:+56633442 | MS.gene78665:CDS |
| CAATAACCAACCTCAACAAT+TGG | 0.352736 | 8.4:+56633574 | MS.gene78665:CDS |
| CGTGCTGATGGATTTGTATA+TGG | 0.353695 | 8.4:+56631535 | MS.gene78665:CDS |
| TGGTTCCATGAACACTTTCT+TGG | 0.354407 | 8.4:-56633334 | None:intergenic |
| CCAACGTCAATGTATGGATT+TGG | 0.355037 | 8.4:+56633376 | MS.gene78665:CDS |
| CCAACGTCAATGTATGGATT+TGG | 0.355037 | 8.4:+56633514 | MS.gene78665:CDS |
| CCAACGTCAATGTATGGATT+TGG | 0.355037 | 8.4:+56633652 | MS.gene78665:CDS |
| CCCTTCCAAGAAAGTGTTCA+TGG | 0.359580 | 8.4:+56633329 | MS.gene78665:CDS |
| GTGCTCCTATTGTTGTGTTT+AGG | 0.361123 | 8.4:-56631765 | None:intergenic |
| TCTTGAACATTGTCTTTGAA+TGG | 0.363036 | 8.4:-56633185 | None:intergenic |
| CTAGCTCTCCTGGTGGCAAT+TGG | 0.365390 | 8.4:-56633917 | None:intergenic |
| CCAAATGGAAGCAATAATAA+TGG | 0.368258 | 8.4:+56633047 | MS.gene78665:CDS |
| CTCCAAGAAACAAGGTTATT+AGG | 0.373520 | 8.4:+56633894 | MS.gene78665:CDS |
| GAACTCCTAAACACAACAAT+AGG | 0.388891 | 8.4:+56631760 | MS.gene78665:CDS |
| CATTATAATGAAGTCCTTGT+TGG | 0.390991 | 8.4:-56631669 | None:intergenic |
| TTGGTTCCATTTCCATCAAA+TGG | 0.392196 | 8.4:+56633395 | MS.gene78665:CDS |
| GTGCTTCCATTTGATGGAAA+TGG | 0.394257 | 8.4:-56633401 | None:intergenic |
| TGTTTGGATTTGTTTCCATC+TGG | 0.396974 | 8.4:+56633797 | MS.gene78665:CDS |
| TTCCTATAGGGTGGAGGACC+TGG | 0.400683 | 8.4:-56632813 | None:intergenic |
| CTATCATGTTCATTGTTGCC+TGG | 0.400918 | 8.4:-56631445 | None:intergenic |
| CCAGAAGAATTATTTCTGTA+AGG | 0.402168 | 8.4:-56634049 | None:intergenic |
| CCATTATTATTGCTTCCATT+TGG | 0.403275 | 8.4:-56633047 | None:intergenic |
| CGAGGAACACTTGCTTGAAA+AGG | 0.407599 | 8.4:-56633257 | None:intergenic |
| TTGGTTCCATTTCCAGCAAA+TGG | 0.410660 | 8.4:+56633671 | MS.gene78665:CDS |
| TCATTATAATGTTAATGGTT+CGG | 0.414528 | 8.4:+56631681 | MS.gene78665:CDS |
| CCTTATCATAGCCACCTAGC+TGG | 0.416024 | 8.4:+56633983 | MS.gene78665:CDS |
| GAGCGAAGTTAGTGGCCTCT+TGG | 0.417939 | 8.4:-56632965 | None:intergenic |
| ACTCATAATTATGATGTTGA+TGG | 0.419818 | 8.4:+56633092 | MS.gene78665:CDS |
| CCCCTTGGCCACCATGGTGG+TGG | 0.420832 | 8.4:-56632750 | None:intergenic |
| TAGATCATGAGGTTTCCTAT+AGG | 0.421514 | 8.4:-56632826 | None:intergenic |
| CAATAACCAACGTCAATGTA+TGG | 0.424652 | 8.4:+56633508 | MS.gene78665:CDS |
| CAATAACCAACGTCAATGTA+TGG | 0.424652 | 8.4:+56633646 | MS.gene78665:CDS |
| TGGAAAATAGCTGTTCTAAC+AGG | 0.425327 | 8.4:+56632858 | MS.gene78665:CDS |
| TAATAACCAACGTCAATGTA+TGG | 0.431013 | 8.4:+56633370 | MS.gene78665:CDS |
| CAATAACCAACCTCAATGTA+TGG | 0.431840 | 8.4:+56633436 | MS.gene78665:CDS |
| TTGTCATGTCTTATGACATT+TGG | 0.434470 | 8.4:+56631790 | MS.gene78665:CDS |
| AAATAACCAACCTCAATGTA+TGG | 0.435118 | 8.4:+56633298 | MS.gene78665:CDS |
| CCATGGACACTTTCTTGGAA+TGG | 0.437818 | 8.4:-56633467 | None:intergenic |
| AGCGAAGTTAGTGGCCTCTT+GGG | 0.440264 | 8.4:-56632964 | None:intergenic |
| TTCCACCACCATGGTGGCCA+AGG | 0.449334 | 8.4:+56632748 | MS.gene78665:CDS |
| CCAGCTAGGTGGCTATGATA+AGG | 0.457593 | 8.4:-56633983 | None:intergenic |
| CACCATTCTTCATCTCCCCT+TGG | 0.458151 | 8.4:-56632765 | None:intergenic |
| CTGAAAATCTTCAACATTGG+TGG | 0.458620 | 8.4:+56631596 | MS.gene78665:CDS |
| TTAATAACCATGCTGCTTCG+AGG | 0.460640 | 8.4:-56633275 | None:intergenic |
| AGCTGGGTTTCATTCTTTGG+AGG | 0.464728 | 8.4:+56634000 | MS.gene78665:CDS |
| TCAAATGAGTTACCACCAAA+TGG | 0.472512 | 8.4:+56633032 | MS.gene78665:CDS |
| TTATTATTGCTTCCATTTGG+TGG | 0.472616 | 8.4:-56633044 | None:intergenic |
| ATGCACAAGTTGGTAGATCT+TGG | 0.474850 | 8.4:+56631511 | MS.gene78665:CDS |
| CCAAATCCAATTGTTGAGGT+TGG | 0.477182 | 8.4:-56633580 | None:intergenic |
| ATCCAGGTCCTCCACCCTAT+AGG | 0.477367 | 8.4:+56632811 | MS.gene78665:CDS |
| AAAGTGAAGTTTGATAGAAA+TGG | 0.479002 | 8.4:+56631625 | MS.gene78665:CDS |
| GTAGATCTTGGTCGTGCTGA+TGG | 0.482508 | 8.4:+56631523 | MS.gene78665:CDS |
| GTTGTAATCCAAATCAAAGA+AGG | 0.482832 | 8.4:+56631812 | MS.gene78665:CDS |
| GACCAGGTAGTTCAAGTAAT+GGG | 0.486798 | 8.4:+56633126 | MS.gene78665:CDS |
| CAGCTAGGTGGCTATGATAA+GGG | 0.488469 | 8.4:-56633982 | None:intergenic |
| CTTATCATAGCCACCTAGCT+GGG | 0.489975 | 8.4:+56633984 | MS.gene78665:CDS |
| TCATCTCCCCTTGGCCACCA+TGG | 0.490729 | 8.4:-56632756 | None:intergenic |
| GGAACCAAATTAGCAGATTG+AGG | 0.500479 | 8.4:-56633857 | None:intergenic |
| AATAACAAGAGCGAAGTTAG+TGG | 0.507267 | 8.4:-56632973 | None:intergenic |
| TGGTACTTCACTATTGCAGC+AGG | 0.513940 | 8.4:-56631649 | None:intergenic |
| TCCATGAACACTTTCTTGGA+AGG | 0.525416 | 8.4:-56633330 | None:intergenic |
| CCAAATCCATACATTGAGGT+TGG | 0.529172 | 8.4:-56633304 | None:intergenic |
| CCAAATCCATACATTGAGGT+TGG | 0.529172 | 8.4:-56633442 | None:intergenic |
| CCATGAACACTTTCTTGGAA+GGG | 0.530268 | 8.4:-56633329 | None:intergenic |
| TGCCCATTACTTGAACTACC+TGG | 0.531064 | 8.4:-56633128 | None:intergenic |
| CAATTGCCACCAGGAGAGCT+AGG | 0.534808 | 8.4:+56633918 | MS.gene78665:CDS |
| TTGTGTTATCGAAAGGATCC+AGG | 0.537060 | 8.4:+56632795 | MS.gene78665:CDS |
| TTCAAAGACAATGTTCAAGA+AGG | 0.537403 | 8.4:+56633188 | MS.gene78665:CDS |
| CATCTGAAAATCTTCAACAT+TGG | 0.541776 | 8.4:+56631593 | MS.gene78665:CDS |
| CCAAATTAGCAGATTGAGGT+AGG | 0.544542 | 8.4:-56633853 | None:intergenic |
| AACCACGTACCTAGCTCTCC+TGG | 0.545227 | 8.4:-56633927 | None:intergenic |
| TCCACCACCATGGTGGCCAA+GGG | 0.545349 | 8.4:+56632749 | MS.gene78665:CDS |
| CCATTCCAAGAAAGTGTCCA+TGG | 0.548559 | 8.4:+56633467 | MS.gene78665:CDS |
| AGATAAAATGTCTGCCCAAG+AGG | 0.559954 | 8.4:+56632950 | MS.gene78665:CDS |
| GGAACCAAATCCAATTGTTG+AGG | 0.562432 | 8.4:-56633584 | None:intergenic |
| CCATTCCAAGAAAATGTCCA+TGG | 0.563991 | 8.4:+56633605 | MS.gene78665:CDS |
| TTGGTTATTGTTAACAACCA+TGG | 0.564781 | 8.4:-56633423 | None:intergenic |
| GGCCAAGGGGAGATGAAGAA+TGG | 0.566706 | 8.4:+56632763 | MS.gene78665:CDS |
| GGACCAGGTAGTTCAAGTAA+TGG | 0.567507 | 8.4:+56633125 | MS.gene78665:CDS |
| TTATTAGGCCAATTGCCACC+AGG | 0.570900 | 8.4:+56633909 | MS.gene78665:CDS |
| GCCGCTATTGTGTTATCGAA+AGG | 0.571370 | 8.4:+56632788 | MS.gene78665:CDS |
| ATTGAAGAGTATGCACAAGT+TGG | 0.591118 | 8.4:+56631501 | MS.gene78665:CDS |
| GATGGAAATAATGGAGGACC+AGG | 0.593292 | 8.4:+56633110 | MS.gene78665:CDS |
| AAATCTTCAACATTGGTGGA+AGG | 0.602303 | 8.4:+56631600 | MS.gene78665:CDS |
| TCTCCCCTTGGCCACCATGG+TGG | 0.603176 | 8.4:-56632753 | None:intergenic |
| TGAGGTTTCCTATAGGGTGG+AGG | 0.603546 | 8.4:-56632819 | None:intergenic |
| CAATGTTCAAGAAGGCAACA+TGG | 0.603751 | 8.4:+56633196 | MS.gene78665:CDS |
| CCAAAGAATGAAACCCAGCT+AGG | 0.605751 | 8.4:-56633997 | None:intergenic |
| CCAAATCCATACATTGACGT+TGG | 0.608283 | 8.4:-56633376 | None:intergenic |
| CCAAATCCATACATTGACGT+TGG | 0.608283 | 8.4:-56633514 | None:intergenic |
| CCAAATCCATACATTGACGT+TGG | 0.608283 | 8.4:-56633652 | None:intergenic |
| GGAACCAAATCCATACATTG+AGG | 0.608410 | 8.4:-56633446 | None:intergenic |
| TCCAGCAAATGGAAGCAACA+TGG | 0.615255 | 8.4:+56633682 | MS.gene78665:CDS |
| TCATGAGGTTTCCTATAGGG+TGG | 0.619245 | 8.4:-56632822 | None:intergenic |
| ACCAAATCAACACAATGAGG+TGG | 0.621822 | 8.4:-56633161 | None:intergenic |
| AAGTGTTCATGGAACCAACA+TGG | 0.623776 | 8.4:+56633340 | MS.gene78665:CDS |
| GGAACCAAATCCATACATTG+AGG | 0.626872 | 8.4:-56633308 | None:intergenic |
| CCACCACCATGGTGGCCAAG+GGG | 0.638555 | 8.4:+56632750 | MS.gene78665:CDS |
| TCCAGCAAATGAAAGCAACA+TGG | 0.639563 | 8.4:+56633544 | MS.gene78665:CDS |
| AAATGTCCATGGAACCAACA+TGG | 0.644962 | 8.4:+56633616 | MS.gene78665:CDS |
| AAGTGTCCATGGAACCGACA+TGG | 0.646793 | 8.4:+56633478 | MS.gene78665:CDS |
| TCCATCAAATGGAAGCACCA+TGG | 0.648218 | 8.4:+56633406 | MS.gene78665:CDS |
| AAGTGTTCCTCGAAGCAGCA+TGG | 0.650910 | 8.4:+56633268 | MS.gene78665:CDS |
| CAAAATCTATACATTGACGT+TGG | 0.654969 | 8.4:-56633232 | None:intergenic |
| GATGTTGATGGAAATAATGG+AGG | 0.666614 | 8.4:+56633104 | MS.gene78665:CDS |
| CAAGGGGAGATGAAGAATGG+TGG | 0.668606 | 8.4:+56632766 | MS.gene78665:CDS |
| TCCTTTCGATAACACAATAG+CGG | 0.668694 | 8.4:-56632789 | None:intergenic |
| AAGAATGAAACCCAGCTAGG+TGG | 0.679661 | 8.4:-56633994 | None:intergenic |
| GGAACCAAATCAACACAATG+AGG | 0.681148 | 8.4:-56633164 | None:intergenic |
| TGGCTATGATAAGGGCAATG+TGG | 0.683056 | 8.4:-56633974 | None:intergenic |
| CACCAGGAGAGCTAGGTACG+TGG | 0.686873 | 8.4:+56633925 | MS.gene78665:CDS |
| GCAATAGTGAAGTACCAACA+AGG | 0.715198 | 8.4:+56631655 | MS.gene78665:CDS |
| CACGTACCTAGCTCTCCTGG+TGG | 0.720148 | 8.4:-56633924 | None:intergenic |
| ATTGAGTAACACTATAGACA+AGG | 0.724328 | 8.4:+56631477 | MS.gene78665:CDS |
| AAGGTGTTCCACCACCATGG+TGG | 0.732712 | 8.4:+56632742 | MS.gene78665:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAATAATTAATTTTAGTA+CGG | - | chr8.4:56632492-56632511 | None:intergenic | 10.0% |
| !!! | TAAGATTTTAGATAAAAATG+TGG | + | chr8.4:56632282-56632301 | MS.gene78665:intron | 15.0% |
| !!! | TATCTAAAATCTTAAAACAT+TGG | - | chr8.4:56632276-56632295 | None:intergenic | 15.0% |
| !!! | TATTTTTGTGAAATTATTAC+CGG | - | chr8.4:56631925-56631944 | None:intergenic | 15.0% |
| !!! | TGTTTTTTGTATTTTGAAAT+TGG | + | chr8.4:56632670-56632689 | MS.gene78665:intron | 15.0% |
| !! | AGAAGTTAAGCAATATATAA+AGG | + | chr8.4:56632235-56632254 | MS.gene78665:intron | 20.0% |
| !! | CATTGAATTTGAATATTTCT+TGG | - | chr8.4:56631708-56631727 | None:intergenic | 20.0% |
| !! | TATGGAATTATTCCAAAAAA+TGG | + | chr8.4:56631553-56631572 | MS.gene78665:CDS | 20.0% |
| !! | TCATTATAATGTTAATGGTT+CGG | + | chr8.4:56631681-56631700 | MS.gene78665:CDS | 20.0% |
| !! | TGTGTGTCAATATATATATT+GGG | + | chr8.4:56632401-56632420 | MS.gene78665:intron | 20.0% |
| !! | TTAAATATAATCACATGTCT+AGG | + | chr8.4:56631951-56631970 | MS.gene78665:intron | 20.0% |
| !!! | AGATTCTCATTATTTTGAAA+TGG | + | chr8.4:56632436-56632455 | MS.gene78665:intron | 20.0% |
| !!! | GATTCTCATTATTTTGAAAT+GGG | + | chr8.4:56632437-56632456 | MS.gene78665:intron | 20.0% |
| !!! | TCCTTATTTTACTAAAATCA+GGG | - | chr8.4:56632902-56632921 | None:intergenic | 20.0% |
| !!! | TCTAATTTTGCATCTAATAA+GGG | - | chr8.4:56632218-56632237 | None:intergenic | 20.0% |
| !!! | TTCTAATTTTGCATCTAATA+AGG | - | chr8.4:56632219-56632238 | None:intergenic | 20.0% |
| ! | AAAGTGAAGTTTGATAGAAA+TGG | + | chr8.4:56631625-56631644 | MS.gene78665:CDS | 25.0% |
| ! | ACTCATAATTATGATGTTGA+TGG | + | chr8.4:56633092-56633111 | MS.gene78665:CDS | 25.0% |
| ! | ATTCAATTAACAAACGAAGT+GGG | + | chr8.4:56632506-56632525 | MS.gene78665:intron | 25.0% |
| ! | ATTTGTCTAATCAATGACAT+TGG | + | chr8.4:56632572-56632591 | MS.gene78665:intron | 25.0% |
| ! | CAATAATCAATGTCAACATT+TGG | + | chr8.4:56633712-56633731 | MS.gene78665:CDS | 25.0% |
| ! | GGACTTCATTATAATGTTAA+TGG | + | chr8.4:56631676-56631695 | MS.gene78665:CDS | 25.0% |
| ! | GTGTGTGTCAATATATATAT+TGG | + | chr8.4:56632400-56632419 | MS.gene78665:intron | 25.0% |
| ! | GTTATTACTAAAAACCATGT+TGG | - | chr8.4:56633357-56633376 | None:intergenic | 25.0% |
| ! | GTTATTGTTAAAAACCATGT+CGG | - | chr8.4:56633495-56633514 | None:intergenic | 25.0% |
| ! | GTTATTGTTAAAAACCATGT+TGG | - | chr8.4:56633495-56633514 | None:intergenic | 25.0% |
| ! | TACATGAATTCGTTACTAAT+AGG | + | chr8.4:56632089-56632108 | MS.gene78665:intron | 25.0% |
| ! | TATTCAATTAACAAACGAAG+TGG | + | chr8.4:56632505-56632524 | MS.gene78665:intron | 25.0% |
| ! | TGTTAAAACTCAATTGTGTA+TGG | + | chr8.4:56632305-56632324 | MS.gene78665:intron | 25.0% |
| !! | CATTTTATCTTGAAGATTCT+TGG | - | chr8.4:56632940-56632959 | None:intergenic | 25.0% |
| !! | TATGATGTTGATGGAAATAA+TGG | + | chr8.4:56633101-56633120 | MS.gene78665:CDS | 25.0% |
| !!! | CCTTATTTTACTAAAATCAG+GGG | - | chr8.4:56632901-56632920 | None:intergenic | 25.0% |
| !!! | CTCCTTATTTTACTAAAATC+AGG | - | chr8.4:56632903-56632922 | None:intergenic | 25.0% |
| !!! | TTTTCGTATTTTGTTTCCTT+TGG | + | chr8.4:56632635-56632654 | MS.gene78665:intron | 25.0% |
| AAAAAATGCTCCAAGAAACA+AGG | + | chr8.4:56633886-56633905 | MS.gene78665:CDS | 30.0% | |
| AAATAACCAACCTCAATGTA+TGG | + | chr8.4:56633298-56633317 | MS.gene78665:CDS | 30.0% | |
| AACACGTTTATATTGTCCAA+AGG | - | chr8.4:56632654-56632673 | None:intergenic | 30.0% | |
| ATAAACGTTAGTGTCATGTT+TGG | - | chr8.4:56631893-56631912 | None:intergenic | 30.0% | |
| ATATATCATACACGAGTCAT+GGG | - | chr8.4:56632150-56632169 | None:intergenic | 30.0% | |
| ATTGAGTAACACTATAGACA+AGG | + | chr8.4:56631477-56631496 | MS.gene78665:CDS | 30.0% | |
| CAAAATCTATACATTGACGT+TGG | - | chr8.4:56633235-56633254 | None:intergenic | 30.0% | |
| CAATAACCAACCAAAATGTT+TGG | + | chr8.4:56633781-56633800 | MS.gene78665:CDS | 30.0% | |
| CATCTGAAAATCTTCAACAT+TGG | + | chr8.4:56631593-56631612 | MS.gene78665:CDS | 30.0% | |
| CATTATAATGAAGTCCTTGT+TGG | - | chr8.4:56631672-56631691 | None:intergenic | 30.0% | |
| CCAAATGGAAGCAATAATAA+TGG | + | chr8.4:56633047-56633066 | MS.gene78665:CDS | 30.0% | |
| CCATTATTATTGCTTCCATT+TGG | - | chr8.4:56633050-56633069 | None:intergenic | 30.0% | |
| CCATTTGGAAAAAAAGTTGA+AGG | + | chr8.4:56633743-56633762 | MS.gene78665:CDS | 30.0% | |
| CCTTACAGAAATAATTCTTC+TGG | + | chr8.4:56634049-56634068 | MS.gene78665:CDS | 30.0% | |
| CTCATGATCTAAAAAAGGAT+TGG | + | chr8.4:56632838-56632857 | MS.gene78665:CDS | 30.0% | |
| GAAACCTCATGATCTAAAAA+AGG | + | chr8.4:56632833-56632852 | MS.gene78665:CDS | 30.0% | |
| GAAACCTGTTCAAAATGTTA+CGG | - | chr8.4:56632713-56632732 | None:intergenic | 30.0% | |
| GGAATTGAAAAATCTTCGTA+AGG | + | chr8.4:56631411-56631430 | MS.gene78665:CDS | 30.0% | |
| GTTGTAATCCAAATCAAAGA+AGG | + | chr8.4:56631812-56631831 | MS.gene78665:CDS | 30.0% | |
| TAAACGTTAGTGTCATGTTT+GGG | - | chr8.4:56631892-56631911 | None:intergenic | 30.0% | |
| TAATAACCAACGTCAATGTA+TGG | + | chr8.4:56633370-56633389 | MS.gene78665:CDS | 30.0% | |
| TATAGCATCAACATCTTTGA+TGG | - | chr8.4:56632009-56632028 | None:intergenic | 30.0% | |
| TCTTGAACATTGTCTTTGAA+TGG | - | chr8.4:56633188-56633207 | None:intergenic | 30.0% | |
| TTATTATTGCTTCCATTTGG+TGG | - | chr8.4:56633047-56633066 | None:intergenic | 30.0% | |
| TTCAAAGACAATGTTCAAGA+AGG | + | chr8.4:56633188-56633207 | MS.gene78665:CDS | 30.0% | |
| TTCTGTAAGGACAATTCATT+TGG | - | chr8.4:56634039-56634058 | None:intergenic | 30.0% | |
| TTGGTTATTGTTAACAACCA+TGG | - | chr8.4:56633426-56633445 | None:intergenic | 30.0% | |
| TTGTCATGTCTTATGACATT+TGG | + | chr8.4:56631790-56631809 | MS.gene78665:CDS | 30.0% | |
| ! | AACAGGTTTCCTTTAGAAAA+AGG | + | chr8.4:56632723-56632742 | MS.gene78665:intron | 30.0% |
| ! | CATTTGGATTTGTTTCCATT+TGG | + | chr8.4:56633728-56633747 | MS.gene78665:CDS | 30.0% |
| ! | GGAAACAAATCCAAACATTT+TGG | - | chr8.4:56633794-56633813 | None:intergenic | 30.0% |
| ! | TAAACCGTAACATTTTGAAC+AGG | + | chr8.4:56632706-56632725 | MS.gene78665:intron | 30.0% |
| !! | ACAAATCCAAACATTTTGGT+TGG | - | chr8.4:56633790-56633809 | None:intergenic | 30.0% |
| !! | CCAGAAGAATTATTTCTGTA+AGG | - | chr8.4:56634052-56634071 | None:intergenic | 30.0% |
| !! | CCCCTGATTTTAGTAAAATA+AGG | + | chr8.4:56632898-56632917 | MS.gene78665:CDS | 30.0% |
| !!! | CAATCCTTTTTTAGATCATG+AGG | - | chr8.4:56632840-56632859 | None:intergenic | 30.0% |
| !!! | CCTTCAACTTTTTTTCCAAA+TGG | - | chr8.4:56633746-56633765 | None:intergenic | 30.0% |
| !!! | CTTATCGGTTTTCCATTTTT+TGG | - | chr8.4:56631568-56631587 | None:intergenic | 30.0% |
| !!! | CTTGGAGCATTTTTTTCATT+AGG | - | chr8.4:56633881-56633900 | None:intergenic | 30.0% |
| AAATCTTCAACATTGGTGGA+AGG | + | chr8.4:56631600-56631619 | MS.gene78665:CDS | 35.0% | |
| AATAACAAGAGCGAAGTTAG+TGG | - | chr8.4:56632976-56632995 | None:intergenic | 35.0% | |
| ACACACACAGACACATTATT+GGG | - | chr8.4:56632384-56632403 | None:intergenic | 35.0% | |
| ACACATTATTGGGACTTCTA+AGG | - | chr8.4:56632374-56632393 | None:intergenic | 35.0% | |
| ACATCACAGATTCATCACAA+TGG | - | chr8.4:56632342-56632361 | None:intergenic | 35.0% | |
| AGATCATGAGGTTTCCTATA+GGG | - | chr8.4:56632828-56632847 | None:intergenic | 35.0% | |
| CAATAACCAACCTCAACAAT+TGG | + | chr8.4:56633574-56633593 | MS.gene78665:CDS | 35.0% | |
| CAATAACCAACCTCAATGTA+TGG | + | chr8.4:56633436-56633455 | MS.gene78665:CDS | 35.0% | |
| CAATAACCAACGTCAATGTA+TGG | + | chr8.4:56633508-56633527 | MS.gene78665:CDS | 35.0% | |
| CACATTATTGGGACTTCTAA+GGG | - | chr8.4:56632373-56632392 | None:intergenic | 35.0% | |
| CATCACAGATTCATCACAAT+GGG | - | chr8.4:56632341-56632360 | None:intergenic | 35.0% | |
| CCATCTGGAAAAAATGTTCA+AGG | + | chr8.4:56633812-56633831 | MS.gene78665:CDS | 35.0% | |
| CGTAAGGAAGTAAAAAATCC+AGG | + | chr8.4:56631427-56631446 | MS.gene78665:CDS | 35.0% | |
| CTCCAAGAAACAAGGTTATT+AGG | + | chr8.4:56633894-56633913 | MS.gene78665:CDS | 35.0% | |
| CTGAAAATCTTCAACATTGG+TGG | + | chr8.4:56631596-56631615 | MS.gene78665:CDS | 35.0% | |
| GAACTCCTAAACACAACAAT+AGG | + | chr8.4:56631760-56631779 | MS.gene78665:CDS | 35.0% | |
| GACTCGTGTATGATATATCA+AGG | + | chr8.4:56632152-56632171 | MS.gene78665:intron | 35.0% | |
| GATATATCATACACGAGTCA+TGG | - | chr8.4:56632151-56632170 | None:intergenic | 35.0% | |
| TAGATCATGAGGTTTCCTAT+AGG | - | chr8.4:56632829-56632848 | None:intergenic | 35.0% | |
| TCAAATGAGTTACCACCAAA+TGG | + | chr8.4:56633032-56633051 | MS.gene78665:CDS | 35.0% | |
| TCCTTTCGATAACACAATAG+CGG | - | chr8.4:56632792-56632811 | None:intergenic | 35.0% | |
| TGGAAAATAGCTGTTCTAAC+AGG | + | chr8.4:56632858-56632877 | MS.gene78665:CDS | 35.0% | |
| TGTACGTACCTTCTTTGATT+TGG | - | chr8.4:56631823-56631842 | None:intergenic | 35.0% | |
| TTGGTTCCATTTCCATCAAA+TGG | + | chr8.4:56633395-56633414 | MS.gene78665:CDS | 35.0% | |
| ! | ATTGAAGAGTATGCACAAGT+TGG | + | chr8.4:56631501-56631520 | MS.gene78665:CDS | 35.0% |
| ! | GATGTTGATGGAAATAATGG+AGG | + | chr8.4:56633104-56633123 | MS.gene78665:CDS | 35.0% |
| ! | TGTTTGGATTTGTTTCCATC+TGG | + | chr8.4:56633797-56633816 | MS.gene78665:CDS | 35.0% |
| ! | TTGCTTTCATTTGCTGGAAA+TGG | - | chr8.4:56633542-56633561 | None:intergenic | 35.0% |
| ! | TTTTCAGATGCAGCACTTAT+CGG | - | chr8.4:56631583-56631602 | None:intergenic | 35.0% |
| !! | ATTCATCACAATGGGTTAAG+AGG | - | chr8.4:56632333-56632352 | None:intergenic | 35.0% |
| !! | TAAAAACCATGTTGGTTCCA+TGG | - | chr8.4:56633349-56633368 | None:intergenic | 35.0% |
| !!! | CCTTGAACATTTTTTCCAGA+TGG | - | chr8.4:56633815-56633834 | None:intergenic | 35.0% |
| AAATGTCCATGGAACCAACA+TGG | + | chr8.4:56633616-56633635 | MS.gene78665:CDS | 40.0% | |
| AAGTGTTCATGGAACCAACA+TGG | + | chr8.4:56633340-56633359 | MS.gene78665:CDS | 40.0% | |
| ACCAAATCAACACAATGAGG+TGG | - | chr8.4:56633164-56633183 | None:intergenic | 40.0% | |
| AGATAAAATGTCTGCCCAAG+AGG | + | chr8.4:56632950-56632969 | MS.gene78665:CDS | 40.0% | |
| CAATGTTCAAGAAGGCAACA+TGG | + | chr8.4:56633196-56633215 | MS.gene78665:CDS | 40.0% | |
| CACACACACAGACACATTAT+TGG | - | chr8.4:56632385-56632404 | None:intergenic | 40.0% | |
| CCAAATCCAATTGTTGAGGT+TGG | - | chr8.4:56633583-56633602 | None:intergenic | 40.0% | |
| CCAAATCCATACATTGACGT+TGG | - | chr8.4:56633379-56633398 | None:intergenic | 40.0% | |
| CCAAATCCATACATTGAGGT+TGG | - | chr8.4:56633307-56633326 | None:intergenic | 40.0% | |
| CCAAATTAGCAGATTGAGGT+AGG | - | chr8.4:56633856-56633875 | None:intergenic | 40.0% | |
| CCAACCTCAACAATTGGATT+TGG | + | chr8.4:56633580-56633599 | MS.gene78665:CDS | 40.0% | |
| CCAACCTCAATGTATGGATT+TGG | + | chr8.4:56633304-56633323 | MS.gene78665:CDS | 40.0% | |
| CCAACGTCAATGTATGGATT+TGG | + | chr8.4:56633376-56633395 | MS.gene78665:CDS | 40.0% | |
| CCATGAACACTTTCTTGGAA+GGG | - | chr8.4:56633332-56633351 | None:intergenic | 40.0% | |
| CCATTCCAAGAAAATGTCCA+TGG | + | chr8.4:56633605-56633624 | MS.gene78665:CDS | 40.0% | |
| CCCAAAACACAGAGAGAAAT+GGG | + | chr8.4:56632115-56632134 | MS.gene78665:intron | 40.0% | |
| CCTACCTCAATCTGCTAATT+TGG | + | chr8.4:56633853-56633872 | MS.gene78665:CDS | 40.0% | |
| CTATCATGTTCATTGTTGCC+TGG | - | chr8.4:56631448-56631467 | None:intergenic | 40.0% | |
| GACCAGGTAGTTCAAGTAAT+GGG | + | chr8.4:56633126-56633145 | MS.gene78665:CDS | 40.0% | |
| GCATCAACATCTTTGATGGA+AGG | - | chr8.4:56632005-56632024 | None:intergenic | 40.0% | |
| GGAACCAAATCAACACAATG+AGG | - | chr8.4:56633167-56633186 | None:intergenic | 40.0% | |
| GGAACCAAATCCAATTGTTG+AGG | - | chr8.4:56633587-56633606 | None:intergenic | 40.0% | |
| GGAACCAAATCCATACATTG+AGG | - | chr8.4:56633311-56633330 | None:intergenic | 40.0% | |
| GGAACCAAATTAGCAGATTG+AGG | - | chr8.4:56633860-56633879 | None:intergenic | 40.0% | |
| GTGCTCCTATTGTTGTGTTT+AGG | - | chr8.4:56631768-56631787 | None:intergenic | 40.0% | |
| GTGCTTCCATTTGATGGAAA+TGG | - | chr8.4:56633404-56633423 | None:intergenic | 40.0% | |
| TAACGTTTATGCTTCGACAC+CGG | + | chr8.4:56631903-56631922 | MS.gene78665:intron | 40.0% | |
| TCCAGCAAATGAAAGCAACA+TGG | + | chr8.4:56633544-56633563 | MS.gene78665:CDS | 40.0% | |
| TCCATGAACACTTTCTTGGA+AGG | - | chr8.4:56633333-56633352 | None:intergenic | 40.0% | |
| TCCCAAAACACAGAGAGAAA+TGG | + | chr8.4:56632114-56632133 | MS.gene78665:intron | 40.0% | |
| TGGTTCCATGAACACTTTCT+TGG | - | chr8.4:56633337-56633356 | None:intergenic | 40.0% | |
| TTGGTTCCATTTCCAGCAAA+TGG | + | chr8.4:56633533-56633552 | MS.gene78665:CDS | 40.0% | |
| TTGTGTTATCGAAAGGATCC+AGG | + | chr8.4:56632795-56632814 | MS.gene78665:CDS | 40.0% | |
| ! | ACCCATTTCTCTCTGTGTTT+TGG | - | chr8.4:56632119-56632138 | None:intergenic | 40.0% |
| ! | CCATGGACATTTTCTTGGAA+TGG | - | chr8.4:56633608-56633627 | None:intergenic | 40.0% |
| ! | CCCATTTCTCTCTGTGTTTT+GGG | - | chr8.4:56632118-56632137 | None:intergenic | 40.0% |
| ! | GCAATAGTGAAGTACCAACA+AGG | + | chr8.4:56631655-56631674 | MS.gene78665:CDS | 40.0% |
| ! | GGCCTAATAACCTTGTTTCT+TGG | - | chr8.4:56633899-56633918 | None:intergenic | 40.0% |
| ! | GGTGGAACACCTTTTTCTAA+AGG | - | chr8.4:56632735-56632754 | None:intergenic | 40.0% |
| ! | TGGTTCCATGGACATTTTCT+TGG | - | chr8.4:56633613-56633632 | None:intergenic | 40.0% |
| ! | TTAATAACCATGCTGCTTCG+AGG | - | chr8.4:56633278-56633297 | None:intergenic | 40.0% |
| ! | TTGCTTCCATTTGCTGGAAA+TGG | - | chr8.4:56633680-56633699 | None:intergenic | 40.0% |
| !! | ACATGTCTAGGTGTCATTTG+AGG | + | chr8.4:56631963-56631982 | MS.gene78665:intron | 40.0% |
| !! | ACCATGTTGCTTTCATTTGC+TGG | - | chr8.4:56633548-56633567 | None:intergenic | 40.0% |
| !! | ATGCACAAGTTGGTAGATCT+TGG | + | chr8.4:56631511-56631530 | MS.gene78665:CDS | 40.0% |
| !! | CGTGCTGATGGATTTGTATA+TGG | + | chr8.4:56631535-56631554 | MS.gene78665:CDS | 40.0% |
| !! | TAAAAACCATGTCGGTTCCA+TGG | - | chr8.4:56633487-56633506 | None:intergenic | 40.0% |
| !! | TCCACCTCATTGTGTTGATT+TGG | + | chr8.4:56633160-56633179 | MS.gene78665:CDS | 40.0% |
| AAGAATGAAACCCAGCTAGG+TGG | - | chr8.4:56633997-56634016 | None:intergenic | 45.0% | |
| ACCATGGTGCTTCCATTTGA+TGG | - | chr8.4:56633410-56633429 | None:intergenic | 45.0% | |
| AGCTGGGTTTCATTCTTTGG+AGG | + | chr8.4:56634000-56634019 | MS.gene78665:CDS | 45.0% | |
| CAGCTAGGTGGCTATGATAA+GGG | - | chr8.4:56633985-56634004 | None:intergenic | 45.0% | |
| CCAAAGAATGAAACCCAGCT+AGG | - | chr8.4:56634000-56634019 | None:intergenic | 45.0% | |
| CCATGGACACTTTCTTGGAA+TGG | - | chr8.4:56633470-56633489 | None:intergenic | 45.0% | |
| CCTAGCTGGGTTTCATTCTT+TGG | + | chr8.4:56633997-56634016 | MS.gene78665:CDS | 45.0% | |
| CGAGGAACACTTGCTTGAAA+AGG | - | chr8.4:56633260-56633279 | None:intergenic | 45.0% | |
| CTTATCATAGCCACCTAGCT+GGG | + | chr8.4:56633984-56634003 | MS.gene78665:CDS | 45.0% | |
| GCCGCTATTGTGTTATCGAA+AGG | + | chr8.4:56632788-56632807 | MS.gene78665:CDS | 45.0% | |
| GGACCAGGTAGTTCAAGTAA+TGG | + | chr8.4:56633125-56633144 | MS.gene78665:CDS | 45.0% | |
| TCATGAGGTTTCCTATAGGG+TGG | - | chr8.4:56632825-56632844 | None:intergenic | 45.0% | |
| TCCAGCAAATGGAAGCAACA+TGG | + | chr8.4:56633682-56633701 | MS.gene78665:CDS | 45.0% | |
| TGCCCATTACTTGAACTACC+TGG | - | chr8.4:56633131-56633150 | None:intergenic | 45.0% | |
| TGGCTATGATAAGGGCAATG+TGG | - | chr8.4:56633977-56633996 | None:intergenic | 45.0% | |
| TGGTACTTCACTATTGCAGC+AGG | - | chr8.4:56631652-56631671 | None:intergenic | 45.0% | |
| TTATTAGGCCAATTGCCACC+AGG | + | chr8.4:56633909-56633928 | MS.gene78665:CDS | 45.0% | |
| ! | ACCATGTTGCTTCCATTTGC+TGG | - | chr8.4:56633686-56633705 | None:intergenic | 45.0% |
| ! | GATGGAAATAATGGAGGACC+AGG | + | chr8.4:56633110-56633129 | MS.gene78665:CDS | 45.0% |
| !! | AAAAAGGTGTTCCACCACCA+TGG | + | chr8.4:56632739-56632758 | MS.gene78665:CDS | 45.0% |
| !! | CCATTCCAAGAAAGTGTCCA+TGG | + | chr8.4:56633467-56633486 | MS.gene78665:CDS | 45.0% |
| !! | CCCTTCCAAGAAAGTGTTCA+TGG | + | chr8.4:56633329-56633348 | MS.gene78665:CDS | 45.0% |
| !! | TCCATCAAATGGAAGCACCA+TGG | + | chr8.4:56633406-56633425 | MS.gene78665:CDS | 45.0% |
| !! | TCTTTGATGGAAGGAGTGTC+TGG | - | chr8.4:56631996-56632015 | None:intergenic | 45.0% |
| AAGTGTCCATGGAACCGACA+TGG | + | chr8.4:56633478-56633497 | MS.gene78665:CDS | 50.0% | |
| AAGTGTTCCTCGAAGCAGCA+TGG | + | chr8.4:56633268-56633287 | MS.gene78665:CDS | 50.0% | |
| AGAGCTAGGTACGTGGTTAC+TGG | + | chr8.4:56633932-56633951 | MS.gene78665:CDS | 50.0% | |
| AGCGAAGTTAGTGGCCTCTT+GGG | - | chr8.4:56632967-56632986 | None:intergenic | 50.0% | |
| CAAGGGGAGATGAAGAATGG+TGG | + | chr8.4:56632766-56632785 | MS.gene78665:CDS | 50.0% | |
| CACCATTCTTCATCTCCCCT+TGG | - | chr8.4:56632768-56632787 | None:intergenic | 50.0% | |
| CCAGCTAGGTGGCTATGATA+AGG | - | chr8.4:56633986-56634005 | None:intergenic | 50.0% | |
| CCTTATCATAGCCACCTAGC+TGG | + | chr8.4:56633983-56634002 | MS.gene78665:CDS | 50.0% | |
| CGGTTCCATGGACACTTTCT+TGG | - | chr8.4:56633475-56633494 | None:intergenic | 50.0% | |
| GTAGATCTTGGTCGTGCTGA+TGG | + | chr8.4:56631523-56631542 | MS.gene78665:CDS | 50.0% | |
| TGAGGTTTCCTATAGGGTGG+AGG | - | chr8.4:56632822-56632841 | None:intergenic | 50.0% | |
| ATCCAGGTCCTCCACCCTAT+AGG | + | chr8.4:56632811-56632830 | MS.gene78665:CDS | 55.0% | |
| CAATTGCCACCAGGAGAGCT+AGG | + | chr8.4:56633918-56633937 | MS.gene78665:CDS | 55.0% | |
| GAGCGAAGTTAGTGGCCTCT+TGG | - | chr8.4:56632968-56632987 | None:intergenic | 55.0% | |
| GGCCAAGGGGAGATGAAGAA+TGG | + | chr8.4:56632763-56632782 | MS.gene78665:CDS | 55.0% | |
| TTCCTATAGGGTGGAGGACC+TGG | - | chr8.4:56632816-56632835 | None:intergenic | 55.0% | |
| ! | AACCACGTACCTAGCTCTCC+TGG | - | chr8.4:56633930-56633949 | None:intergenic | 55.0% |
| ! | AAGGTGTTCCACCACCATGG+TGG | + | chr8.4:56632742-56632761 | MS.gene78665:CDS | 55.0% |
| ! | CTAGCTCTCCTGGTGGCAAT+TGG | - | chr8.4:56633920-56633939 | None:intergenic | 55.0% |
| CACCAGGAGAGCTAGGTACG+TGG | + | chr8.4:56633925-56633944 | MS.gene78665:CDS | 60.0% | |
| TCATCTCCCCTTGGCCACCA+TGG | - | chr8.4:56632759-56632778 | None:intergenic | 60.0% | |
| TCCACCACCATGGTGGCCAA+GGG | + | chr8.4:56632749-56632768 | MS.gene78665:CDS | 60.0% | |
| TTCCACCACCATGGTGGCCA+AGG | + | chr8.4:56632748-56632767 | MS.gene78665:CDS | 60.0% | |
| ! | CACGTACCTAGCTCTCCTGG+TGG | - | chr8.4:56633927-56633946 | None:intergenic | 60.0% |
| CCACCACCATGGTGGCCAAG+GGG | + | chr8.4:56632750-56632769 | MS.gene78665:CDS | 65.0% | |
| TCTCCCCTTGGCCACCATGG+TGG | - | chr8.4:56632756-56632775 | None:intergenic | 65.0% | |
| CCCCTTGGCCACCATGGTGG+TGG | - | chr8.4:56632753-56632772 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 56631400 | 56634078 | 56631400 | ID=MS.gene78665 |
| chr8.4 | mRNA | 56631400 | 56634078 | 56631400 | ID=MS.gene78665.t1;Parent=MS.gene78665 |
| chr8.4 | exon | 56631400 | 56631833 | 56631400 | ID=MS.gene78665.t1.exon1;Parent=MS.gene78665.t1 |
| chr8.4 | CDS | 56631400 | 56631833 | 56631400 | ID=cds.MS.gene78665.t1;Parent=MS.gene78665.t1 |
| chr8.4 | exon | 56632728 | 56634078 | 56632728 | ID=MS.gene78665.t1.exon2;Parent=MS.gene78665.t1 |
| chr8.4 | CDS | 56632728 | 56634078 | 56632728 | ID=cds.MS.gene78665.t1;Parent=MS.gene78665.t1 |
| Gene Sequence |
| Protein sequence |
