Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78720.t1 | XP_003614420.1 | 97.3 | 445 | 12 | 0 | 1 | 445 | 1 | 445 | 1.30E-242 | 848.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78720.t1 | Q6NQK2 | 58.4 | 462 | 157 | 10 | 1 | 442 | 1 | 447 | 5.4e-136 | 485.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78720.t1 | G7JX37 | 97.3 | 445 | 12 | 0 | 1 | 445 | 1 | 445 | 9.6e-243 | 848.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene78720.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78720.t1 | MTR_5g053430 | 97.303 | 445 | 12 | 0 | 1 | 445 | 1 | 445 | 0.0 | 901 |
| MS.gene78720.t1 | MTR_5g053430 | 96.629 | 445 | 12 | 1 | 1 | 445 | 1 | 442 | 0.0 | 890 |
| MS.gene78720.t1 | MTR_1g093680 | 61.667 | 480 | 144 | 8 | 2 | 444 | 4 | 480 | 0.0 | 568 |
| MS.gene78720.t1 | MTR_1g093670 | 51.493 | 402 | 131 | 9 | 41 | 440 | 6 | 345 | 1.01e-122 | 361 |
| MS.gene78720.t1 | MTR_7g033320 | 54.425 | 226 | 79 | 3 | 6 | 219 | 5 | 218 | 6.82e-83 | 264 |
| MS.gene78720.t1 | MTR_2g014680 | 49.402 | 251 | 117 | 4 | 34 | 274 | 27 | 277 | 4.66e-76 | 240 |
| MS.gene78720.t1 | MTR_4g088245 | 58.586 | 198 | 79 | 2 | 36 | 230 | 44 | 241 | 1.22e-75 | 239 |
| MS.gene78720.t1 | MTR_8g102240 | 59.162 | 191 | 68 | 3 | 36 | 218 | 27 | 215 | 8.26e-73 | 237 |
| MS.gene78720.t1 | MTR_8g102240 | 59.162 | 191 | 68 | 3 | 36 | 218 | 27 | 215 | 8.47e-73 | 237 |
| MS.gene78720.t1 | MTR_8g069160 | 60.556 | 180 | 68 | 2 | 36 | 212 | 44 | 223 | 3.20e-72 | 228 |
| MS.gene78720.t1 | MTR_4g078875 | 55.330 | 197 | 83 | 2 | 32 | 223 | 19 | 215 | 2.55e-68 | 219 |
| MS.gene78720.t1 | MTR_2g090735 | 55.446 | 202 | 86 | 2 | 32 | 229 | 20 | 221 | 7.37e-64 | 207 |
| MS.gene78720.t1 | MTR_6g084430 | 30.168 | 179 | 107 | 6 | 58 | 233 | 5 | 168 | 4.44e-14 | 73.6 |
| MS.gene78720.t1 | MTR_2157s0010 | 28.796 | 191 | 104 | 8 | 56 | 229 | 6 | 181 | 8.31e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78720.t1 | AT1G25580 | 57.235 | 463 | 163 | 10 | 1 | 443 | 1 | 448 | 1.51e-176 | 501 |
| MS.gene78720.t1 | AT3G01600 | 55.405 | 222 | 92 | 4 | 5 | 224 | 4 | 220 | 4.27e-78 | 247 |
| MS.gene78720.t1 | AT5G14490 | 51.600 | 250 | 106 | 6 | 5 | 250 | 4 | 242 | 3.96e-77 | 242 |
| MS.gene78720.t1 | AT5G14490 | 51.600 | 250 | 106 | 6 | 5 | 250 | 4 | 242 | 4.31e-77 | 244 |
| MS.gene78720.t1 | AT5G14490 | 51.600 | 250 | 106 | 6 | 5 | 250 | 7 | 245 | 7.65e-77 | 243 |
| MS.gene78720.t1 | AT5G14490 | 51.600 | 250 | 106 | 6 | 5 | 250 | 7 | 245 | 1.11e-76 | 243 |
| MS.gene78720.t1 | AT4G29230 | 59.375 | 192 | 67 | 3 | 36 | 218 | 28 | 217 | 2.81e-74 | 239 |
| MS.gene78720.t1 | AT4G29230 | 59.375 | 192 | 67 | 3 | 36 | 218 | 28 | 217 | 1.01e-73 | 240 |
| MS.gene78720.t1 | AT4G29230 | 59.375 | 192 | 66 | 3 | 36 | 218 | 28 | 216 | 1.77e-73 | 239 |
| MS.gene78720.t1 | AT4G28500 | 51.556 | 225 | 103 | 4 | 5 | 223 | 2 | 226 | 3.90e-72 | 230 |
| MS.gene78720.t1 | AT1G28470 | 51.598 | 219 | 97 | 3 | 14 | 223 | 25 | 243 | 2.02e-71 | 228 |
| MS.gene78720.t1 | AT5G56620 | 55.385 | 195 | 74 | 4 | 36 | 218 | 22 | 215 | 7.54e-68 | 222 |
| MS.gene78720.t1 | AT5G56620 | 55.385 | 195 | 74 | 4 | 36 | 218 | 22 | 215 | 7.62e-68 | 222 |
| MS.gene78720.t1 | AT5G56620 | 55.385 | 195 | 74 | 4 | 36 | 218 | 22 | 215 | 1.30e-67 | 221 |
| MS.gene78720.t1 | AT3G18400 | 30.588 | 170 | 95 | 8 | 58 | 221 | 5 | 157 | 9.37e-14 | 72.4 |
| MS.gene78720.t1 | AT1G01720 | 25.784 | 287 | 161 | 13 | 58 | 324 | 7 | 261 | 3.45e-13 | 70.5 |
| MS.gene78720.t1 | AT3G12910 | 31.544 | 149 | 86 | 5 | 61 | 206 | 24 | 159 | 2.16e-11 | 65.1 |
| MS.gene78720.t1 | AT1G02220 | 31.250 | 160 | 90 | 6 | 59 | 215 | 4 | 146 | 2.70e-11 | 65.5 |
| MS.gene78720.t1 | AT1G33060 | 29.341 | 167 | 96 | 7 | 57 | 216 | 23 | 174 | 5.54e-11 | 65.1 |
| MS.gene78720.t1 | AT1G33060 | 29.341 | 167 | 96 | 7 | 57 | 216 | 23 | 174 | 5.71e-11 | 65.1 |
| MS.gene78720.t1 | AT5G53950 | 28.372 | 215 | 126 | 9 | 58 | 262 | 17 | 213 | 6.87e-11 | 64.3 |
Find 100 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATAGTATGCTGACAATT+TGG | 0.134743 | 5.4:-42390415 | None:intergenic |
| CTTCTTCCACAGAGCAATTA+AGG | 0.224693 | 5.4:+42392598 | MS.gene78720:CDS |
| GGATCAAATTTGACACCTTT+TGG | 0.259342 | 5.4:-42392327 | None:intergenic |
| TGAACCCCATTCAAGATTAC+TGG | 0.283602 | 5.4:-42392707 | None:intergenic |
| GAAAAGCTGAGAAAACTAAT+TGG | 0.286732 | 5.4:+42392780 | MS.gene78720:CDS |
| CAAGATAGCTTTATAGCATT+TGG | 0.294737 | 5.4:+42396056 | MS.gene78720:CDS |
| TTTGTGTTTATATAGGAATT+TGG | 0.295109 | 5.4:+42396029 | MS.gene78720:intron |
| CATCTGATCAGGAGGTAATT+TGG | 0.312766 | 5.4:+42392349 | MS.gene78720:CDS |
| GGCTCAGGAGTCACAGATTT+GGG | 0.319343 | 5.4:-42392968 | None:intergenic |
| CAATAGTATGCTGACAATTT+GGG | 0.324090 | 5.4:-42390414 | None:intergenic |
| CCAACAGCAGCAAGTCAAAC+TGG | 0.324794 | 5.4:+42392877 | MS.gene78720:CDS |
| AGGCTCAGGAGTCACAGATT+TGG | 0.328067 | 5.4:-42392969 | None:intergenic |
| GACGTCCGCTGGCACAAAAC+TGG | 0.357268 | 5.4:+42392674 | MS.gene78720:CDS |
| TCTGTTGGATTCACAACAAC+TGG | 0.369929 | 5.4:+42395715 | MS.gene78720:CDS |
| AAAATACATGATCAGGATTT+GGG | 0.372286 | 5.4:+42392650 | MS.gene78720:CDS |
| ATCTTGAATGGGGTTCAAAA+AGG | 0.388213 | 5.4:+42392713 | MS.gene78720:CDS |
| TTATAGTGAAAGACAGTATT+CGG | 0.389524 | 5.4:+42392994 | MS.gene78720:CDS |
| ATTGTTGCTTCAATAGCTTC+AGG | 0.390657 | 5.4:-42392923 | None:intergenic |
| ACATTTGACTCTGCATTTGA+AGG | 0.393867 | 5.4:-42395902 | None:intergenic |
| GCAATTAAGGCTTATAATAC+TGG | 0.394443 | 5.4:+42392611 | MS.gene78720:CDS |
| GAATACTGTCTTTCACTATA+AGG | 0.423713 | 5.4:-42392992 | None:intergenic |
| ATATCCTTCTTCAGATGCTC+TGG | 0.424976 | 5.4:-42395851 | None:intergenic |
| GTCACAGATTTGGGAGTAAC+CGG | 0.426136 | 5.4:-42392959 | None:intergenic |
| TCATCTTTACCATCTCTAGT+AGG | 0.429288 | 5.4:-42395782 | None:intergenic |
| CTAAGCCAGTAATCTTGAAT+GGG | 0.433717 | 5.4:+42392702 | MS.gene78720:CDS |
| CAAATTTGATCCATCTGATC+AGG | 0.442832 | 5.4:+42392338 | MS.gene78720:CDS |
| CAGTATTCGGATGTAGATCT+AGG | 0.447710 | 5.4:+42393007 | MS.gene78720:CDS |
| AGGAACAGAAGAGGATGAAA+AGG | 0.451744 | 5.4:+42392823 | MS.gene78720:CDS |
| ACTAAGCCAGTAATCTTGAA+TGG | 0.454048 | 5.4:+42392701 | MS.gene78720:CDS |
| ACCAAAATTAAAAGTGCATC+GGG | 0.455483 | 5.4:+42390340 | MS.gene78720:CDS |
| GCAAGTCAAACTGGGTGATA+AGG | 0.457369 | 5.4:+42392886 | MS.gene78720:CDS |
| AGGTTTACCTGGGGAATGGC+GGG | 0.461494 | 5.4:-42393040 | None:intergenic |
| AGGATTTGGGTGACGTCCGC+TGG | 0.463363 | 5.4:+42392663 | MS.gene78720:CDS |
| AAAAGCTGAGAAAACTAATT+GGG | 0.463490 | 5.4:+42392781 | MS.gene78720:CDS |
| GCCTCCTCAGATGAATTGTC+TGG | 0.464452 | 5.4:+42395505 | MS.gene78720:intron |
| GGAGTTTCGACTAAGTCAAT+TGG | 0.465851 | 5.4:+42395943 | MS.gene78720:CDS |
| ATTACTCTTGAAGTGAATGA+TGG | 0.470794 | 5.4:+42392435 | MS.gene78720:CDS |
| GAGTGGCCTGGTTTGCCAAA+AGG | 0.477697 | 5.4:+42392312 | MS.gene78720:CDS |
| TTTAAGGTTTACCTGGGGAA+TGG | 0.481491 | 5.4:-42393044 | None:intergenic |
| TCAAGTCTCTCCTCTATGGC+GGG | 0.485338 | 5.4:+42389607 | None:intergenic |
| CATAAATAGAAAGGCTGGGT+TGG | 0.487379 | 5.4:-42395817 | None:intergenic |
| ATTGAAAATAATCCTGATGA+TGG | 0.487705 | 5.4:+42395662 | MS.gene78720:CDS |
| CTTTCTATTTATGCTCAGCT+AGG | 0.488398 | 5.4:+42395827 | MS.gene78720:CDS |
| AACAATCACAAAAGTGGATC+CGG | 0.490246 | 5.4:+42392940 | MS.gene78720:CDS |
| CTGAGCATAAATAGAAAGGC+TGG | 0.491378 | 5.4:-42395822 | None:intergenic |
| ACTCATCCTCAAAACTTGCC+AGG | 0.498733 | 5.4:+42392468 | MS.gene78720:CDS |
| TGAAGCAACAATCACAAAAG+TGG | 0.500776 | 5.4:+42392934 | MS.gene78720:CDS |
| CTGACAATTTGGGCAAGCCT+TGG | 0.506059 | 5.4:-42390404 | None:intergenic |
| TTTCTATATGCAGACCATCA+TGG | 0.507135 | 5.4:+42390293 | MS.gene78720:intron |
| GTTATGCATCAATATCATCT+AGG | 0.507798 | 5.4:+42392803 | MS.gene78720:CDS |
| CTTTCACTATAAGGAGGCTC+AGG | 0.512409 | 5.4:-42392983 | None:intergenic |
| TGCATCGGGAGCATGTGATC+CGG | 0.516041 | 5.4:+42390354 | MS.gene78720:CDS |
| CCAGTTTGACTTGCTGCTGT+TGG | 0.516424 | 5.4:-42392877 | None:intergenic |
| AAGGTTTACCTGGGGAATGG+CGG | 0.521012 | 5.4:-42393041 | None:intergenic |
| ATGTCAGGTGTTAAGCAAGA+TGG | 0.522325 | 5.4:+42392563 | MS.gene78720:intron |
| AATGAAAATAATGCTGATGA+TGG | 0.526709 | 5.4:+42395611 | MS.gene78720:CDS |
| AACCAAAATTAAAAGTGCAT+CGG | 0.530697 | 5.4:+42390339 | MS.gene78720:CDS |
| GTTCTGTATATGAGTAGTGC+AGG | 0.531845 | 5.4:+42392752 | MS.gene78720:CDS |
| TTGCTTGCAAAATGTGGTGT+TGG | 0.532555 | 5.4:+42392375 | MS.gene78720:CDS |
| TTTGCTTGCTCTTCACAATG+AGG | 0.533963 | 5.4:-42395539 | None:intergenic |
| CAATTTGGGCAAGCCTTGGT+AGG | 0.534551 | 5.4:-42390400 | None:intergenic |
| GTAGAAACTGAACATAATGA+AGG | 0.537204 | 5.4:+42395578 | MS.gene78720:CDS |
| ACTCTGCATTTGAAGGCTCA+AGG | 0.539581 | 5.4:-42395895 | None:intergenic |
| CTAGCTGAGCATAAATAGAA+AGG | 0.539748 | 5.4:-42395826 | None:intergenic |
| TAGTGAATCACAAAATCTGT+TGG | 0.540122 | 5.4:+42395700 | MS.gene78720:CDS |
| TACCATCTCTAGTAGGAGAC+TGG | 0.544929 | 5.4:-42395775 | None:intergenic |
| TAATTGCTCTGTGGAAGAAG+TGG | 0.556020 | 5.4:-42392595 | None:intergenic |
| GTTGTAAGGTTGTAAAAGAG+TGG | 0.556602 | 5.4:+42392295 | MS.gene78720:intron |
| CAAATTACCTCCTGATCAGA+TGG | 0.556689 | 5.4:-42392348 | None:intergenic |
| AGGACCAGAGCATCTGAAGA+AGG | 0.560183 | 5.4:+42395847 | MS.gene78720:CDS |
| AACTCGTCAACGAAAGGATG+AGG | 0.562435 | 5.4:-42392408 | None:intergenic |
| AGACACACCCGCCATTCCCC+AGG | 0.573342 | 5.4:+42393033 | MS.gene78720:CDS |
| TGTAGAGAATGACACACCTT+CGG | 0.575337 | 5.4:+42395922 | MS.gene78720:CDS |
| AGCCAGTCTCCTACTAGAGA+TGG | 0.577237 | 5.4:+42395773 | MS.gene78720:CDS |
| ATTATGTTCAGTTTCTACCA+TGG | 0.577859 | 5.4:-42395573 | None:intergenic |
| ATAATAAACTCGTCAACGAA+AGG | 0.582156 | 5.4:-42392414 | None:intergenic |
| TCCAGACAATTCATCTGAGG+AGG | 0.583627 | 5.4:-42395506 | None:intergenic |
| CAAGTCTCTCCTCTATGGCG+GGG | 0.593225 | 5.4:+42389608 | None:intergenic |
| AAGGTTGTAAAAGAGTGGCC+TGG | 0.594766 | 5.4:+42392300 | MS.gene78720:intron |
| AGCAAAAGATGATCTATCCA+TGG | 0.596236 | 5.4:+42395556 | MS.gene78720:CDS |
| GTGATCCGGAAAATGTTACA+TGG | 0.597855 | 5.4:+42390368 | MS.gene78720:CDS |
| ATGCAGACCATCATGGCTAG+TGG | 0.599353 | 5.4:+42390300 | MS.gene78720:intron |
| CAACAGCAGCAAGTCAAACT+GGG | 0.602243 | 5.4:+42392878 | MS.gene78720:CDS |
| TATATGAGTAGTGCAGGAGG+AGG | 0.609676 | 5.4:+42392758 | MS.gene78720:CDS |
| TGGCACTTGCTTGCAAAATG+TGG | 0.618127 | 5.4:+42392369 | MS.gene78720:CDS |
| TAGAAACTGAACATAATGAA+GGG | 0.620128 | 5.4:+42395579 | MS.gene78720:CDS |
| TCATCCAGACAATTCATCTG+AGG | 0.620597 | 5.4:-42395509 | None:intergenic |
| TGAGCATAAATAGAAAGGCT+GGG | 0.624006 | 5.4:-42395821 | None:intergenic |
| ACAGAAGAGGATGAAAAGGA+TGG | 0.629598 | 5.4:+42392827 | MS.gene78720:CDS |
| ATTTGATCCATCTGATCAGG+AGG | 0.636045 | 5.4:+42392341 | MS.gene78720:CDS |
| AATTGCTCTGTGGAAGAAGT+GGG | 0.639626 | 5.4:-42392594 | None:intergenic |
| TACTGTCTTTCACTATAAGG+AGG | 0.644386 | 5.4:-42392989 | None:intergenic |
| ATATCATCTAGGAACAGAAG+AGG | 0.646141 | 5.4:+42392814 | MS.gene78720:CDS |
| ATGGAAAAGCAATCCTACCA+AGG | 0.655385 | 5.4:+42390387 | MS.gene78720:CDS |
| CTGTATATGAGTAGTGCAGG+AGG | 0.660155 | 5.4:+42392755 | MS.gene78720:CDS |
| AGGCTTATAATACTGGCACT+CGG | 0.668317 | 5.4:+42392618 | MS.gene78720:CDS |
| TATAAGCCTTAATTGCTCTG+TGG | 0.669172 | 5.4:-42392604 | None:intergenic |
| TAAGCCAGTAATCTTGAATG+GGG | 0.669245 | 5.4:+42392703 | MS.gene78720:CDS |
| TGACTTAGTCGAAACTCCGA+AGG | 0.670660 | 5.4:-42395938 | None:intergenic |
| TATAGCATTTGGTTACAACA+AGG | 0.688806 | 5.4:+42396067 | MS.gene78720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAATAAAATAAAAAAA+GGG | + | chr5.4:42394637-42394656 | MS.gene78720:intron | 0.0% |
| !! | TTATAAAATAAAATAAAAAA+AGG | + | chr5.4:42394636-42394655 | MS.gene78720:intron | 0.0% |
| !!! | TATTATTATTATTATTTTTT+TGG | + | chr5.4:42389863-42389882 | MS.gene78720:intron | 0.0% |
| !!! | TTTTATTTTATAATTTTTAT+TGG | - | chr5.4:42394629-42394648 | None:intergenic | 0.0% |
| !! | AATAGTATATATATAAAGTA+AGG | + | chr5.4:42393669-42393688 | MS.gene78720:intron | 10.0% |
| !! | ATTAATTATTTGACAAAAAA+AGG | - | chr5.4:42393230-42393249 | None:intergenic | 10.0% |
| !! | GTGTATAAATTAATAAAAAT+CGG | + | chr5.4:42393573-42393592 | MS.gene78720:intron | 10.0% |
| !! | TAAAATAAAATAAAAAAAGG+GGG | + | chr5.4:42394639-42394658 | MS.gene78720:intron | 10.0% |
| !!! | AATTACAAAAAAATATGTTT+TGG | + | chr5.4:42393638-42393657 | MS.gene78720:intron | 10.0% |
| !!! | ATTTTTACTCATATTTAATA+CGG | - | chr5.4:42393545-42393564 | None:intergenic | 10.0% |
| !!! | CAATTTATTTATTTGTTTTT+AGG | + | chr5.4:42393938-42393957 | MS.gene78720:intron | 10.0% |
| !! | AAATTAATGAAAATATTGAG+TGG | - | chr5.4:42393810-42393829 | None:intergenic | 15.0% |
| !! | AAATTGTTCAATATTTGTAA+AGG | - | chr5.4:42390982-42391001 | None:intergenic | 15.0% |
| !! | AATTGTTCAATATTTGTAAA+GGG | - | chr5.4:42390981-42391000 | None:intergenic | 15.0% |
| !! | ATTGTTTATAACTATCAATA+TGG | - | chr5.4:42392253-42392272 | None:intergenic | 15.0% |
| !! | TAAAACATTTCATAAGATTT+AGG | - | chr5.4:42391387-42391406 | None:intergenic | 15.0% |
| !! | TTAGATGAAAAAAATGTTTA+GGG | - | chr5.4:42394189-42394208 | None:intergenic | 15.0% |
| !!! | ACATTTTTGTTTATTAATCA+AGG | + | chr5.4:42395326-42395345 | MS.gene78720:intron | 15.0% |
| !!! | GATTATTTTCTTTGTAATTT+TGG | - | chr5.4:42393302-42393321 | None:intergenic | 15.0% |
| !!! | GGTTTTAAAAAAAAAAACAA+GGG | - | chr5.4:42391747-42391766 | None:intergenic | 15.0% |
| !!! | TATAAAGTAAGGTTTTTTTA+TGG | + | chr5.4:42393680-42393699 | MS.gene78720:intron | 15.0% |
| !!! | TATAATTTTTATTGGTTCAT+TGG | - | chr5.4:42394621-42394640 | None:intergenic | 15.0% |
| !!! | TGGTTTTAAAAAAAAAAACA+AGG | - | chr5.4:42391748-42391767 | None:intergenic | 15.0% |
| !!! | TGTTTTTTTTTTTAAAACCA+AGG | + | chr5.4:42391748-42391767 | MS.gene78720:intron | 15.0% |
| !!! | TTTGAATTTTGATATTATGT+TGG | - | chr5.4:42391472-42391491 | None:intergenic | 15.0% |
| !!! | TTTTTCTTGATGATTTTTTA+GGG | + | chr5.4:42390481-42390500 | MS.gene78720:intron | 15.0% |
| !! | AAAGCATATATCCTATAAAT+AGG | + | chr5.4:42390611-42390630 | MS.gene78720:intron | 20.0% |
| !! | AACTATCAATATGGTATATA+TGG | - | chr5.4:42392244-42392263 | None:intergenic | 20.0% |
| !! | ACATTTGGATAAAAACTAAA+TGG | + | chr5.4:42389979-42389998 | MS.gene78720:intron | 20.0% |
| !! | AGAGAAAAAAATCAATTGAA+AGG | - | chr5.4:42394253-42394272 | None:intergenic | 20.0% |
| !! | ATATATCCTATAAATAGGAA+TGG | + | chr5.4:42390616-42390635 | MS.gene78720:intron | 20.0% |
| !! | ATTAAAATCTAAATACTCAG+TGG | - | chr5.4:42394822-42394841 | None:intergenic | 20.0% |
| !! | CATTTGGATAAAAACTAAAT+GGG | + | chr5.4:42389980-42389999 | MS.gene78720:intron | 20.0% |
| !! | GAGAAAAAAATCAATTGAAA+GGG | - | chr5.4:42394252-42394271 | None:intergenic | 20.0% |
| !! | GTTAGATGAAAAAAATGTTT+AGG | - | chr5.4:42394190-42394209 | None:intergenic | 20.0% |
| !! | TATATCCTATAAATAGGAAT+GGG | + | chr5.4:42390617-42390636 | MS.gene78720:intron | 20.0% |
| !! | TTACTATTTAATATCTAACC+CGG | + | chr5.4:42394499-42394518 | MS.gene78720:intron | 20.0% |
| !! | TTTATGTTTGAGGAAAAAAA+TGG | + | chr5.4:42394018-42394037 | MS.gene78720:intron | 20.0% |
| !! | TTTGTGTTTATATAGGAATT+TGG | + | chr5.4:42396029-42396048 | MS.gene78720:intron | 20.0% |
| !!! | AACAAGAAAAAATGGTTTTA+AGG | - | chr5.4:42393063-42393082 | None:intergenic | 20.0% |
| !!! | AATTATCAGTTCTTTTCTTT+AGG | - | chr5.4:42391524-42391543 | None:intergenic | 20.0% |
| !!! | ATGTGTTTTCTATGTTTAAA+TGG | + | chr5.4:42390032-42390051 | MS.gene78720:intron | 20.0% |
| !!! | ATTTGATAATGAAACATAGT+AGG | - | chr5.4:42389650-42389669 | None:intergenic | 20.0% |
| !!! | CTTTTTCTTGATGATTTTTT+AGG | + | chr5.4:42390480-42390499 | MS.gene78720:intron | 20.0% |
| !!! | TCAATTAGTTTTTATGTTTG+AGG | + | chr5.4:42394008-42394027 | MS.gene78720:intron | 20.0% |
| !!! | TCATTTAAGATAGGTTTTTA+TGG | + | chr5.4:42394858-42394877 | MS.gene78720:intron | 20.0% |
| !!! | TCTAACATTTTTTCTTTTTC+AGG | + | chr5.4:42394204-42394223 | MS.gene78720:intron | 20.0% |
| !!! | TCTTTGATAACAAGAAAAAA+TGG | - | chr5.4:42393071-42393090 | None:intergenic | 20.0% |
| !!! | TTGTTTTAACTTCATGAATT+TGG | + | chr5.4:42389956-42389975 | MS.gene78720:intron | 20.0% |
| !!! | TTTAGTTCATTTTCAACAAA+TGG | - | chr5.4:42393331-42393350 | None:intergenic | 20.0% |
| !!! | TTTCGTAATGTTTTGAATTT+TGG | - | chr5.4:42391437-42391456 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTTCTGTTGTA+AGG | + | chr5.4:42392281-42392300 | MS.gene78720:intron | 20.0% |
| ! | AAAAATACATGATCAGGATT+TGG | + | chr5.4:42392649-42392668 | MS.gene78720:CDS | 25.0% |
| ! | AAAAGCTGAGAAAACTAATT+GGG | + | chr5.4:42392781-42392800 | MS.gene78720:CDS | 25.0% |
| ! | AAAAGGCTGTAAAAAGATTA+TGG | + | chr5.4:42392730-42392749 | MS.gene78720:CDS | 25.0% |
| ! | AAAATACATGATCAGGATTT+GGG | + | chr5.4:42392650-42392669 | MS.gene78720:CDS | 25.0% |
| ! | AACATTTCATAAGATTTAGG+TGG | - | chr5.4:42391384-42391403 | None:intergenic | 25.0% |
| ! | AAGAACATCTCTTTCTATAT+AGG | + | chr5.4:42393374-42393393 | MS.gene78720:intron | 25.0% |
| ! | AAGGGAATAAAATTGATGTT+TGG | - | chr5.4:42394234-42394253 | None:intergenic | 25.0% |
| ! | AATCCATTGTAAGTTAGTTA+AGG | + | chr5.4:42390559-42390578 | MS.gene78720:intron | 25.0% |
| ! | AATGAAAATAATGCTGATGA+TGG | + | chr5.4:42395611-42395630 | MS.gene78720:CDS | 25.0% |
| ! | AATTAGATGGAATAATACTG+CGG | - | chr5.4:42390907-42390926 | None:intergenic | 25.0% |
| ! | AATTCTGTTGGAAAAAGATA+GGG | + | chr5.4:42390769-42390788 | MS.gene78720:intron | 25.0% |
| ! | AGAAATATTGAGAATGAATG+TGG | - | chr5.4:42393718-42393737 | None:intergenic | 25.0% |
| ! | AGCATTATTAAAGCCATTAA+GGG | - | chr5.4:42395285-42395304 | None:intergenic | 25.0% |
| ! | ATAAAAACTCATTGAGAACA+TGG | - | chr5.4:42395974-42395993 | None:intergenic | 25.0% |
| ! | ATAAACAAAAATGTGCAGAA+TGG | - | chr5.4:42395320-42395339 | None:intergenic | 25.0% |
| ! | ATAATACTGCGGTATATTAA+TGG | - | chr5.4:42390896-42390915 | None:intergenic | 25.0% |
| ! | ATAGAACACAAAAATAGATC+AGG | - | chr5.4:42395472-42395491 | None:intergenic | 25.0% |
| ! | ATCCATTGTAAGTTAGTTAA+GGG | + | chr5.4:42390560-42390579 | MS.gene78720:intron | 25.0% |
| ! | ATCTATCAAGTACTAAACTA+TGG | - | chr5.4:42390539-42390558 | None:intergenic | 25.0% |
| ! | ATTGAAAATAATCCTGATGA+TGG | + | chr5.4:42395662-42395681 | MS.gene78720:CDS | 25.0% |
| ! | ATTTGGACTCAAAATATTAG+TGG | + | chr5.4:42393199-42393218 | MS.gene78720:intron | 25.0% |
| ! | CTATCTTAAATGATGTCTAA+AGG | - | chr5.4:42394851-42394870 | None:intergenic | 25.0% |
| ! | GAAAAACAAAATTGCAAAAG+AGG | - | chr5.4:42390868-42390887 | None:intergenic | 25.0% |
| ! | TAAAAACTCATTGAGAACAT+GGG | - | chr5.4:42395973-42395992 | None:intergenic | 25.0% |
| ! | TAAATCCCATTCCTATTTAT+AGG | - | chr5.4:42390625-42390644 | None:intergenic | 25.0% |
| ! | TACTATTTAATATCTAACCC+GGG | + | chr5.4:42394500-42394519 | MS.gene78720:intron | 25.0% |
| ! | TAGAAACTGAACATAATGAA+GGG | + | chr5.4:42395579-42395598 | MS.gene78720:CDS | 25.0% |
| ! | TAGCATTATTAAAGCCATTA+AGG | - | chr5.4:42395286-42395305 | None:intergenic | 25.0% |
| ! | TATCTAATATAAAGCAACGA+CGG | + | chr5.4:42391578-42391597 | MS.gene78720:intron | 25.0% |
| ! | TCCTAAAAGTTATGAAATAG+CGG | - | chr5.4:42391252-42391271 | None:intergenic | 25.0% |
| ! | TTATAGTGAAAGACAGTATT+CGG | + | chr5.4:42392994-42393013 | MS.gene78720:CDS | 25.0% |
| ! | TTTCACGTAAAATGAAATAG+CGG | + | chr5.4:42391783-42391802 | MS.gene78720:intron | 25.0% |
| ! | TTTGGACTCAAAATATTAGT+GGG | + | chr5.4:42393200-42393219 | MS.gene78720:intron | 25.0% |
| !! | AAATGCCTAAATCTGAAATA+TGG | + | chr5.4:42390104-42390123 | MS.gene78720:intron | 25.0% |
| !! | AACCAAAATTAAAAGTGCAT+CGG | + | chr5.4:42390339-42390358 | MS.gene78720:CDS | 25.0% |
| !! | AATCCTGATCATGTATTTTT+CGG | - | chr5.4:42392649-42392668 | None:intergenic | 25.0% |
| !! | ACGCATTTTTGTGTTTATAT+AGG | + | chr5.4:42396022-42396041 | MS.gene78720:intron | 25.0% |
| !! | CTTTAGACATCATTTAAGAT+AGG | + | chr5.4:42394849-42394868 | MS.gene78720:intron | 25.0% |
| !! | TCTGATTTGATTTATGAGAT+GGG | + | chr5.4:42389707-42389726 | MS.gene78720:intron | 25.0% |
| !! | TTCTGATTTGATTTATGAGA+TGG | + | chr5.4:42389706-42389725 | MS.gene78720:intron | 25.0% |
| !!! | CTAATTTTGGATTTGCTATA+AGG | + | chr5.4:42395377-42395396 | MS.gene78720:intron | 25.0% |
| !!! | TATTAAAGCCATATTTCTAG+AGG | - | chr5.4:42395189-42395208 | None:intergenic | 25.0% |
| !!! | TTTTTTAGGGTACATTGTTA+TGG | + | chr5.4:42390494-42390513 | MS.gene78720:intron | 25.0% |
| !!! | TTTTTTCCTAAGACATTTGT+AGG | - | chr5.4:42392141-42392160 | None:intergenic | 25.0% |
| AAATGGTCTATCATTAGACT+TGG | + | chr5.4:42391134-42391153 | MS.gene78720:intron | 30.0% | |
| AACACACAAAACAACTTGTA+AGG | - | chr5.4:42395239-42395258 | None:intergenic | 30.0% | |
| AATCTAAATACTCAGTGGTT+TGG | - | chr5.4:42394817-42394836 | None:intergenic | 30.0% | |
| AATCTGTTGTTACATCAGTT+GGG | + | chr5.4:42392026-42392045 | MS.gene78720:intron | 30.0% | |
| ACTTCATGAATTTGGACATT+TGG | + | chr5.4:42389964-42389983 | MS.gene78720:intron | 30.0% | |
| AGAGAGAAACTGAAGTTATT+AGG | + | chr5.4:42391698-42391717 | MS.gene78720:intron | 30.0% | |
| AGTTAGTTAAGGGGTTATAT+AGG | + | chr5.4:42390570-42390589 | MS.gene78720:intron | 30.0% | |
| ATAATAAACTCGTCAACGAA+AGG | - | chr5.4:42392417-42392436 | None:intergenic | 30.0% | |
| ATCTAATCCATCAATTCTGT+TGG | + | chr5.4:42390757-42390776 | MS.gene78720:intron | 30.0% | |
| ATTACTCTTGAAGTGAATGA+TGG | + | chr5.4:42392435-42392454 | MS.gene78720:CDS | 30.0% | |
| ATTATGTTCAGTTTCTACCA+TGG | - | chr5.4:42395576-42395595 | None:intergenic | 30.0% | |
| ATTCCAACATAACATAGCAT+TGG | + | chr5.4:42391541-42391560 | MS.gene78720:intron | 30.0% | |
| CAAGTCCATATTTCAGATTT+AGG | - | chr5.4:42390112-42390131 | None:intergenic | 30.0% | |
| CAATAATGAATTAGTCCAAG+TGG | - | chr5.4:42394337-42394356 | None:intergenic | 30.0% | |
| CAATAGTATGCTGACAATTT+GGG | - | chr5.4:42390417-42390436 | None:intergenic | 30.0% | |
| CAATTCTGTTGGAAAAAGAT+AGG | + | chr5.4:42390768-42390787 | MS.gene78720:intron | 30.0% | |
| CTTCCTTCTTTCATTCTTTA+CGG | - | chr5.4:42391680-42391699 | None:intergenic | 30.0% | |
| GAAAAGCTGAGAAAACTAAT+TGG | + | chr5.4:42392780-42392799 | MS.gene78720:CDS | 30.0% | |
| GAATACTGTCTTTCACTATA+AGG | - | chr5.4:42392995-42393014 | None:intergenic | 30.0% | |
| GAGAGAAACTGAAGTTATTA+GGG | + | chr5.4:42391699-42391718 | MS.gene78720:intron | 30.0% | |
| GCAATTAAGGCTTATAATAC+TGG | + | chr5.4:42392611-42392630 | MS.gene78720:CDS | 30.0% | |
| GGGTTCAAACAAAAATTAGA+TGG | - | chr5.4:42390920-42390939 | None:intergenic | 30.0% | |
| GTAGAAACTGAACATAATGA+AGG | + | chr5.4:42395578-42395597 | MS.gene78720:CDS | 30.0% | |
| GTTATGCATCAATATCATCT+AGG | + | chr5.4:42392803-42392822 | MS.gene78720:CDS | 30.0% | |
| TAAGCTTCAATGAAAATGTC+AGG | + | chr5.4:42392548-42392567 | MS.gene78720:intron | 30.0% | |
| TAGTGAATCACAAAATCTGT+TGG | + | chr5.4:42395700-42395719 | MS.gene78720:CDS | 30.0% | |
| TATAGCATTTGGTTACAACA+AGG | + | chr5.4:42396067-42396086 | MS.gene78720:CDS | 30.0% | |
| TATTAAGTAAGAGATTCCTC+TGG | - | chr5.4:42390200-42390219 | None:intergenic | 30.0% | |
| TCAAACTATCTGGATTCAAA+TGG | + | chr5.4:42391117-42391136 | MS.gene78720:intron | 30.0% | |
| TCAATAGTATGCTGACAATT+TGG | - | chr5.4:42390418-42390437 | None:intergenic | 30.0% | |
| TCCATTGTAAGTTAGTTAAG+GGG | + | chr5.4:42390561-42390580 | MS.gene78720:intron | 30.0% | |
| TGAAAATACAAGATTCTCCT+TGG | - | chr5.4:42391768-42391787 | None:intergenic | 30.0% | |
| TGCATAATATATGCAATGTC+CGG | + | chr5.4:42394974-42394993 | MS.gene78720:intron | 30.0% | |
| TTAGTTCCTACAAATGTCTT+AGG | + | chr5.4:42392132-42392151 | MS.gene78720:intron | 30.0% | |
| TTATGAGATCGTTTGAGAAA+AGG | + | chr5.4:42391966-42391985 | MS.gene78720:intron | 30.0% | |
| TTGGACTCAAAATATTAGTG+GGG | + | chr5.4:42393201-42393220 | MS.gene78720:intron | 30.0% | |
| TTTCCAATGCTATGTTATGT+TGG | - | chr5.4:42391547-42391566 | None:intergenic | 30.0% | |
| ! | AAAAAACCTTTTCTCACTAG+TGG | - | chr5.4:42394896-42394915 | None:intergenic | 30.0% |
| ! | AAAAACCTTTTCTCACTAGT+GGG | - | chr5.4:42394895-42394914 | None:intergenic | 30.0% |
| ! | ACCAAAATTAAAAGTGCATC+GGG | + | chr5.4:42390340-42390359 | MS.gene78720:CDS | 30.0% |
| ! | ACCATGTCAATTTTAAACCA+AGG | - | chr5.4:42389930-42389949 | None:intergenic | 30.0% |
| ! | ATTTGATTTATGAGATGGGT+TGG | + | chr5.4:42389711-42389730 | MS.gene78720:intron | 30.0% |
| ! | CTTTTCCATGTAACATTTTC+CGG | - | chr5.4:42390376-42390395 | None:intergenic | 30.0% |
| ! | GATAATGCTCTTAGATTTTG+TGG | + | chr5.4:42390131-42390150 | MS.gene78720:intron | 30.0% |
| ! | TATATACTAGTTTAGAGACC+CGG | - | chr5.4:42394531-42394550 | None:intergenic | 30.0% |
| ! | TCCTTGGTTTAAAATTGACA+TGG | + | chr5.4:42389926-42389945 | MS.gene78720:intron | 30.0% |
| ! | TCTTTTTCCAACAGAATTGA+TGG | - | chr5.4:42390767-42390786 | None:intergenic | 30.0% |
| ! | TGGTTTAAAATTGACATGGT+TGG | + | chr5.4:42389930-42389949 | MS.gene78720:intron | 30.0% |
| ! | TTTCACATCCTCTAGAAATA+TGG | + | chr5.4:42395178-42395197 | MS.gene78720:intron | 30.0% |
| !! | ACCGCTATTTCATAACTTTT+AGG | + | chr5.4:42391248-42391267 | MS.gene78720:intron | 30.0% |
| !! | CAAGATAGCTTTATAGCATT+TGG | + | chr5.4:42396056-42396075 | MS.gene78720:CDS | 30.0% |
| !! | CGTAATGTTTTGAATTTTGG+TGG | - | chr5.4:42391434-42391453 | None:intergenic | 30.0% |
| !! | GTTTGTGTTTTTGTTCAAGT+TGG | + | chr5.4:42389770-42389789 | MS.gene78720:intron | 30.0% |
| !! | GTTTTTAAGCGTGTATTAGA+TGG | + | chr5.4:42391084-42391103 | MS.gene78720:intron | 30.0% |
| !! | TTAGATTATGTGTGTTGACT+AGG | + | chr5.4:42390233-42390252 | MS.gene78720:intron | 30.0% |
| !! | TTGTTTTGTGTGTTTGAGTT+AGG | + | chr5.4:42395245-42395264 | MS.gene78720:intron | 30.0% |
| !!! | AAATGGTTTTAAGGTTTACC+TGG | - | chr5.4:42393054-42393073 | None:intergenic | 30.0% |
| !!! | AATGGTTTTAAGGTTTACCT+GGG | - | chr5.4:42393053-42393072 | None:intergenic | 30.0% |
| !!! | TAGGAGGGAAAACTTTTTTT+TGG | - | chr5.4:42395020-42395039 | None:intergenic | 30.0% |
| !!! | TTGGTCAGTTTAGGTTTTTT+TGG | + | chr5.4:42389789-42389808 | MS.gene78720:intron | 30.0% |
| AAATAAAAAAAGGGGGACCT+AGG | + | chr5.4:42394646-42394665 | MS.gene78720:intron | 35.0% | |
| AAATAACATCGTGCGTAAAC+CGG | - | chr5.4:42390063-42390082 | None:intergenic | 35.0% | |
| AACAATCACAAAAGTGGATC+CGG | + | chr5.4:42392940-42392959 | MS.gene78720:CDS | 35.0% | |
| AACCCATCAGTTTACTTAGT+AGG | + | chr5.4:42390935-42390954 | MS.gene78720:intron | 35.0% | |
| AACGCATTTCTCGCAAAAAA+CGG | - | chr5.4:42391634-42391653 | None:intergenic | 35.0% | |
| AATATTTGTAAAGGGCCACA+TGG | - | chr5.4:42390973-42390992 | None:intergenic | 35.0% | |
| ACATTTGACTCTGCATTTGA+AGG | - | chr5.4:42395905-42395924 | None:intergenic | 35.0% | |
| ACCCATCAGTTTACTTAGTA+GGG | + | chr5.4:42390936-42390955 | MS.gene78720:intron | 35.0% | |
| ACCCCTTAACTAACTTACAA+TGG | - | chr5.4:42390565-42390584 | None:intergenic | 35.0% | |
| ACTAAGCCAGTAATCTTGAA+TGG | + | chr5.4:42392701-42392720 | MS.gene78720:CDS | 35.0% | |
| ACTAAGTGTAACTAGTTCCT+TGG | + | chr5.4:42389910-42389929 | MS.gene78720:intron | 35.0% | |
| AGCAAAAGATGATCTATCCA+TGG | + | chr5.4:42395556-42395575 | MS.gene78720:CDS | 35.0% | |
| AGGAATGGGATTTATGTTGA+GGG | + | chr5.4:42390631-42390650 | MS.gene78720:intron | 35.0% | |
| AGGACCATAGTAGTTAATAG+CGG | + | chr5.4:42391165-42391184 | MS.gene78720:intron | 35.0% | |
| AGGGTACATTGTTATGGAAT+GGG | + | chr5.4:42390500-42390519 | MS.gene78720:intron | 35.0% | |
| AGTTCATGGCAAGTCATAAT+AGG | - | chr5.4:42393107-42393126 | None:intergenic | 35.0% | |
| ATAATGAGTACTCAGTAGCA+GGG | + | chr5.4:42393172-42393191 | MS.gene78720:intron | 35.0% | |
| ATATCATCTAGGAACAGAAG+AGG | + | chr5.4:42392814-42392833 | MS.gene78720:CDS | 35.0% | |
| ATCTTGAATGGGGTTCAAAA+AGG | + | chr5.4:42392713-42392732 | MS.gene78720:CDS | 35.0% | |
| CAAAACAACTTGTAAGGTAC+AGG | - | chr5.4:42395233-42395252 | None:intergenic | 35.0% | |
| CAAATTTGATCCATCTGATC+AGG | + | chr5.4:42392338-42392357 | MS.gene78720:CDS | 35.0% | |
| CAATCTGTTGTTACATCAGT+TGG | + | chr5.4:42392025-42392044 | MS.gene78720:intron | 35.0% | |
| CATAATATATGCAATGTCCG+GGG | + | chr5.4:42394976-42394995 | MS.gene78720:intron | 35.0% | |
| CTAAGCCAGTAATCTTGAAT+GGG | + | chr5.4:42392702-42392721 | MS.gene78720:CDS | 35.0% | |
| CTAGCTGAGCATAAATAGAA+AGG | - | chr5.4:42395829-42395848 | None:intergenic | 35.0% | |
| CTATCCGCTATTAACTACTA+TGG | - | chr5.4:42391172-42391191 | None:intergenic | 35.0% | |
| CTATGCAGAGTAGTTAATAG+CGG | - | chr5.4:42391942-42391961 | None:intergenic | 35.0% | |
| CTTAGTTTCAATCCACCTAT+AGG | + | chr5.4:42395069-42395088 | MS.gene78720:intron | 35.0% | |
| CTTTCTATTTATGCTCAGCT+AGG | + | chr5.4:42395827-42395846 | MS.gene78720:CDS | 35.0% | |
| GATTAGAATCGGAAAAGTCT+TGG | + | chr5.4:42390667-42390686 | MS.gene78720:intron | 35.0% | |
| GCATAATATATGCAATGTCC+GGG | + | chr5.4:42394975-42394994 | MS.gene78720:intron | 35.0% | |
| GTTGTAAGGTTGTAAAAGAG+TGG | + | chr5.4:42392295-42392314 | MS.gene78720:intron | 35.0% | |
| TAACTACTATGGTCCTATGA+TGG | - | chr5.4:42391161-42391180 | None:intergenic | 35.0% | |
| TAAGCCAGTAATCTTGAATG+GGG | + | chr5.4:42392703-42392722 | MS.gene78720:CDS | 35.0% | |
| TAAGGGGTTATATAGGTAGT+TGG | + | chr5.4:42390577-42390596 | MS.gene78720:intron | 35.0% | |
| TACTGTCTTTCACTATAAGG+AGG | - | chr5.4:42392992-42393011 | None:intergenic | 35.0% | |
| TAGGAATGGGATTTATGTTG+AGG | + | chr5.4:42390630-42390649 | MS.gene78720:intron | 35.0% | |
| TAGGGTACATTGTTATGGAA+TGG | + | chr5.4:42390499-42390518 | MS.gene78720:intron | 35.0% | |
| TATAAGCCTTAATTGCTCTG+TGG | - | chr5.4:42392607-42392626 | None:intergenic | 35.0% | |
| TCATCTTTACCATCTCTAGT+AGG | - | chr5.4:42395785-42395804 | None:intergenic | 35.0% | |
| TCTTGGTCTCTTGATATCTA+GGG | + | chr5.4:42390684-42390703 | MS.gene78720:intron | 35.0% | |
| TGAAGCAACAATCACAAAAG+TGG | + | chr5.4:42392934-42392953 | MS.gene78720:CDS | 35.0% | |
| TGAGCATAAATAGAAAGGCT+GGG | - | chr5.4:42395824-42395843 | None:intergenic | 35.0% | |
| TTTAAGCGTGTATTAGATGG+AGG | + | chr5.4:42391087-42391106 | MS.gene78720:intron | 35.0% | |
| TTTCTATATGCAGACCATCA+TGG | + | chr5.4:42390293-42390312 | MS.gene78720:intron | 35.0% | |
| ! | AAATTAGAAGTGTAGCCAAG+TGG | - | chr5.4:42395364-42395383 | None:intergenic | 35.0% |
| ! | ATTCACTATCCCACCATTTT+TGG | - | chr5.4:42395688-42395707 | None:intergenic | 35.0% |
| ! | ATTGTTGCTTCAATAGCTTC+AGG | - | chr5.4:42392926-42392945 | None:intergenic | 35.0% |
| ! | CTTGGCTACACTTCTAATTT+TGG | + | chr5.4:42395364-42395383 | MS.gene78720:intron | 35.0% |
| ! | GGATCAAATTTGACACCTTT+TGG | - | chr5.4:42392330-42392349 | None:intergenic | 35.0% |
| ! | TATCCCGCTATAGCATTTTT+GGG | - | chr5.4:42391213-42391232 | None:intergenic | 35.0% |
| ! | TTGTAAGGTACAGGCTTTTA+AGG | - | chr5.4:42395224-42395243 | None:intergenic | 35.0% |
| ! | TTTTGCGAGAAATGCGTTTT+GGG | + | chr5.4:42391636-42391655 | MS.gene78720:intron | 35.0% |
| ! | TTTTTGCGAGAAATGCGTTT+TGG | + | chr5.4:42391635-42391654 | MS.gene78720:intron | 35.0% |
| !! | ATCGAGAAGTATTGTTTGTG+AGG | + | chr5.4:42390795-42390814 | MS.gene78720:intron | 35.0% |
| !! | CTATAGGTGGATTGAAACTA+AGG | - | chr5.4:42395071-42395090 | None:intergenic | 35.0% |
| !! | TAGTAGTTAATAGCGGATAG+CGG | + | chr5.4:42391172-42391191 | MS.gene78720:intron | 35.0% |
| !! | TCGAGAAGTATTGTTTGTGA+GGG | + | chr5.4:42390796-42390815 | MS.gene78720:intron | 35.0% |
| !! | TGGCTTTAATAGTGCAGATA+AGG | + | chr5.4:42395198-42395217 | MS.gene78720:intron | 35.0% |
| !! | TTGACATTTAGCTTGTGAGT+TGG | - | chr5.4:42392061-42392080 | None:intergenic | 35.0% |
| !! | TTGTTCAAGTTGGTCAGTTT+AGG | + | chr5.4:42389780-42389799 | MS.gene78720:intron | 35.0% |
| !!! | ATGGTTTTAAGGTTTACCTG+GGG | - | chr5.4:42393052-42393071 | None:intergenic | 35.0% |
| !!! | GAGGGAAAACTTTTTTTTGG+TGG | - | chr5.4:42395017-42395036 | None:intergenic | 35.0% |
| !!! | GGAAAACTTTTTTTTGGTGG+TGG | - | chr5.4:42395014-42395033 | None:intergenic | 35.0% |
| !!! | TCCCGATGCACTTTTAATTT+TGG | - | chr5.4:42390344-42390363 | None:intergenic | 35.0% |
| AATTGCTCTGTGGAAGAAGT+GGG | - | chr5.4:42392597-42392616 | None:intergenic | 40.0% | |
| ACACTACACACTAGAGTTCA+TGG | - | chr5.4:42393121-42393140 | None:intergenic | 40.0% | |
| ACAGAAGAGGATGAAAAGGA+TGG | + | chr5.4:42392827-42392846 | MS.gene78720:CDS | 40.0% | |
| ACCCATGACCACATGTTTAA+AGG | + | chr5.4:42394296-42394315 | MS.gene78720:intron | 40.0% | |
| ACCCCTACTAAGTAAACTGA+TGG | - | chr5.4:42390941-42390960 | None:intergenic | 40.0% | |
| ACTTCAACAGTCTCCCTTAA+TGG | + | chr5.4:42395269-42395288 | MS.gene78720:intron | 40.0% | |
| AGATTGCAGGCTAAATAGGT+GGG | - | chr5.4:42392011-42392030 | None:intergenic | 40.0% | |
| AGGAACAGAAGAGGATGAAA+AGG | + | chr5.4:42392823-42392842 | MS.gene78720:CDS | 40.0% | |
| AGGATAGAGGTCAAACTATC+TGG | + | chr5.4:42391107-42391126 | MS.gene78720:intron | 40.0% | |
| AGGCTTATAATACTGGCACT+CGG | + | chr5.4:42392618-42392637 | MS.gene78720:CDS | 40.0% | |
| AGTATTCCTACTACTGAGCA+GGG | - | chr5.4:42394713-42394732 | None:intergenic | 40.0% | |
| ATATCCTTCTTCAGATGCTC+TGG | - | chr5.4:42395854-42395873 | None:intergenic | 40.0% | |
| ATGGAAAAGCAATCCTACCA+AGG | + | chr5.4:42390387-42390406 | MS.gene78720:CDS | 40.0% | |
| ATGGGATTTATGTTGAGGGT+AGG | + | chr5.4:42390635-42390654 | MS.gene78720:intron | 40.0% | |
| ATGTCAGGTGTTAAGCAAGA+TGG | + | chr5.4:42392563-42392582 | MS.gene78720:intron | 40.0% | |
| ATTTGATCCATCTGATCAGG+AGG | + | chr5.4:42392341-42392360 | MS.gene78720:CDS | 40.0% | |
| CAAATTACCTCCTGATCAGA+TGG | - | chr5.4:42392351-42392370 | None:intergenic | 40.0% | |
| CAACAGATTGCAGGCTAAAT+AGG | - | chr5.4:42392015-42392034 | None:intergenic | 40.0% | |
| CAGTATTCGGATGTAGATCT+AGG | + | chr5.4:42393007-42393026 | MS.gene78720:CDS | 40.0% | |
| CATAAATAGAAAGGCTGGGT+TGG | - | chr5.4:42395820-42395839 | None:intergenic | 40.0% | |
| CATCTATGTAGTAAGACCAG+AGG | + | chr5.4:42390181-42390200 | MS.gene78720:intron | 40.0% | |
| CATCTGATCAGGAGGTAATT+TGG | + | chr5.4:42392349-42392368 | MS.gene78720:CDS | 40.0% | |
| CCCATCAGTTTACTTAGTAG+GGG | + | chr5.4:42390937-42390956 | MS.gene78720:intron | 40.0% | |
| CCCATGACCACATGTTTAAA+GGG | + | chr5.4:42394297-42394316 | MS.gene78720:intron | 40.0% | |
| CCCCTACTAAGTAAACTGAT+GGG | - | chr5.4:42390940-42390959 | None:intergenic | 40.0% | |
| CCCTTTAAACATGTGGTCAT+GGG | - | chr5.4:42394300-42394319 | None:intergenic | 40.0% | |
| CGCTATTAACTACTCTGCAT+AGG | + | chr5.4:42391940-42391959 | MS.gene78720:intron | 40.0% | |
| CTATGTTTAAATGGCGTTGC+CGG | + | chr5.4:42390041-42390060 | MS.gene78720:intron | 40.0% | |
| CTGAGCATAAATAGAAAGGC+TGG | - | chr5.4:42395825-42395844 | None:intergenic | 40.0% | |
| CTGATGTAACAACAGATTGC+AGG | - | chr5.4:42392024-42392043 | None:intergenic | 40.0% | |
| CTGTAGTATCTTTCTTCTGC+TGG | + | chr5.4:42395130-42395149 | MS.gene78720:intron | 40.0% | |
| CTTCTTCCACAGAGCAATTA+AGG | + | chr5.4:42392598-42392617 | MS.gene78720:CDS | 40.0% | |
| GATAATGAGTACTCAGTAGC+AGG | + | chr5.4:42393171-42393190 | MS.gene78720:intron | 40.0% | |
| GGAGTTTCGACTAAGTCAAT+TGG | + | chr5.4:42395943-42395962 | MS.gene78720:CDS | 40.0% | |
| GGGTGATAATCTTGCAAATG+TGG | + | chr5.4:42390000-42390019 | MS.gene78720:intron | 40.0% | |
| GTCTTGGTCTCTTGATATCT+AGG | + | chr5.4:42390683-42390702 | MS.gene78720:intron | 40.0% | |
| GTGATCCGGAAAATGTTACA+TGG | + | chr5.4:42390368-42390387 | MS.gene78720:CDS | 40.0% | |
| GTGTATTAGATGGAGGATAG+AGG | + | chr5.4:42391094-42391113 | MS.gene78720:intron | 40.0% | |
| GTTCTGTATATGAGTAGTGC+AGG | + | chr5.4:42392752-42392771 | MS.gene78720:CDS | 40.0% | |
| TAATGAGTACTCAGTAGCAG+GGG | + | chr5.4:42393173-42393192 | MS.gene78720:intron | 40.0% | |
| TAATTGCTCTGTGGAAGAAG+TGG | - | chr5.4:42392598-42392617 | None:intergenic | 40.0% | |
| TCATCCAGACAATTCATCTG+AGG | - | chr5.4:42395512-42395531 | None:intergenic | 40.0% | |
| TCCCTTTAAACATGTGGTCA+TGG | - | chr5.4:42394301-42394320 | None:intergenic | 40.0% | |
| TCTGTTGGATTCACAACAAC+TGG | + | chr5.4:42395715-42395734 | MS.gene78720:CDS | 40.0% | |
| TGAACCCCATTCAAGATTAC+TGG | - | chr5.4:42392710-42392729 | None:intergenic | 40.0% | |
| TGAGCTTAGCTCAGTTTGTA+GGG | + | chr5.4:42394947-42394966 | MS.gene78720:intron | 40.0% | |
| TGTAGAGAATGACACACCTT+CGG | + | chr5.4:42395922-42395941 | MS.gene78720:CDS | 40.0% | |
| TTAAGCCCACTAGTGAGAAA+AGG | + | chr5.4:42394887-42394906 | MS.gene78720:intron | 40.0% | |
| TTGCTTGCAAAATGTGGTGT+TGG | + | chr5.4:42392375-42392394 | MS.gene78720:CDS | 40.0% | |
| TTTATGTTGAGGGTAGGCAT+TGG | + | chr5.4:42390641-42390660 | MS.gene78720:intron | 40.0% | |
| TTTGCTTGCTCTTCACAATG+AGG | - | chr5.4:42395542-42395561 | None:intergenic | 40.0% | |
| TTTGGGTCCCTTTAAACATG+TGG | - | chr5.4:42394307-42394326 | None:intergenic | 40.0% | |
| ! | AGTCCAAGTGGTAAGAGTTT+TGG | - | chr5.4:42394325-42394344 | None:intergenic | 40.0% |
| ! | ATCCCGCTATAGCATTTTTG+GGG | - | chr5.4:42391212-42391231 | None:intergenic | 40.0% |
| ! | CATTAGACTTGGTCCATCAT+AGG | + | chr5.4:42391145-42391164 | MS.gene78720:intron | 40.0% |
| ! | CTATCCCGCTATAGCATTTT+TGG | - | chr5.4:42391214-42391233 | None:intergenic | 40.0% |
| ! | CTGTTCCATCACACCATTTT+TGG | - | chr5.4:42395637-42395656 | None:intergenic | 40.0% |
| ! | GTCCAAGTGGTAAGAGTTTT+GGG | - | chr5.4:42394324-42394343 | None:intergenic | 40.0% |
| ! | TTTAAGGTTTACCTGGGGAA+TGG | - | chr5.4:42393047-42393066 | None:intergenic | 40.0% |
| ! | TTTGCGAGAAATGCGTTTTG+GGG | + | chr5.4:42391637-42391656 | MS.gene78720:intron | 40.0% |
| !! | ATCCTGATGATGGCCAAAAA+TGG | + | chr5.4:42395672-42395691 | MS.gene78720:CDS | 40.0% |
| !! | ATGCTGATGATGGCCAAAAA+TGG | + | chr5.4:42395621-42395640 | MS.gene78720:CDS | 40.0% |
| !! | CGAGAAGTATTGTTTGTGAG+GGG | + | chr5.4:42390797-42390816 | MS.gene78720:intron | 40.0% |
| !! | GGCATTGGTGAGATTAGAAT+CGG | + | chr5.4:42390656-42390675 | MS.gene78720:intron | 40.0% |
| !! | TGATGATGGCCAAAAATGGT+GGG | + | chr5.4:42395625-42395644 | MS.gene78720:CDS | 40.0% |
| !!! | AACTTTTTTTTGGTGGTGGC+CGG | - | chr5.4:42395010-42395029 | None:intergenic | 40.0% |
| !!! | TTTTGGGGTGAGAAGATGAA+AGG | + | chr5.4:42391652-42391671 | MS.gene78720:intron | 40.0% |
| AAAACCGCTATGCAGTGTTG+CGG | + | chr5.4:42391817-42391836 | MS.gene78720:intron | 45.0% | |
| AACTCGTCAACGAAAGGATG+AGG | - | chr5.4:42392411-42392430 | None:intergenic | 45.0% | |
| AAGGTTGTAAAAGAGTGGCC+TGG | + | chr5.4:42392300-42392319 | MS.gene78720:intron | 45.0% | |
| ACAGTACGTACATGCTAGGA+GGG | - | chr5.4:42395035-42395054 | None:intergenic | 45.0% | |
| ACTCATCCTCAAAACTTGCC+AGG | + | chr5.4:42392468-42392487 | MS.gene78720:CDS | 45.0% | |
| ACTCTGCATTTGAAGGCTCA+AGG | - | chr5.4:42395898-42395917 | None:intergenic | 45.0% | |
| AGTTAATAGCGGCGCTATAG+CGG | - | chr5.4:42391931-42391950 | None:intergenic | 45.0% | |
| ATCCTCAAAACTTGCCAGGT+TGG | + | chr5.4:42392472-42392491 | MS.gene78720:intron | 45.0% | |
| ATGCCGCAATTAAGGCCTAT+AGG | - | chr5.4:42395087-42395106 | None:intergenic | 45.0% | |
| ATTGTTTGTGAGGGGCCATT+TGG | + | chr5.4:42390805-42390824 | MS.gene78720:intron | 45.0% | |
| CAACACAGTACGTACATGCT+AGG | - | chr5.4:42395039-42395058 | None:intergenic | 45.0% | |
| CAACAGCAGCAAGTCAAACT+GGG | + | chr5.4:42392878-42392897 | MS.gene78720:CDS | 45.0% | |
| CAATTCATCTGAGGAGGCTT+CGG | - | chr5.4:42395503-42395522 | None:intergenic | 45.0% | |
| CAGATTGCAGGCTAAATAGG+TGG | - | chr5.4:42392012-42392031 | None:intergenic | 45.0% | |
| CCACCTATAGGCCTTAATTG+CGG | + | chr5.4:42395081-42395100 | MS.gene78720:intron | 45.0% | |
| CGACCCCAAAAATGCTATAG+CGG | + | chr5.4:42391206-42391225 | MS.gene78720:intron | 45.0% | |
| CTAGCATGTACGTACTGTGT+TGG | + | chr5.4:42395037-42395056 | MS.gene78720:intron | 45.0% | |
| CTGTATATGAGTAGTGCAGG+AGG | + | chr5.4:42392755-42392774 | MS.gene78720:CDS | 45.0% | |
| CTTTCACTATAAGGAGGCTC+AGG | - | chr5.4:42392986-42393005 | None:intergenic | 45.0% | |
| GACCCAAAACTCTTACCACT+TGG | + | chr5.4:42394319-42394338 | MS.gene78720:intron | 45.0% | |
| GACCCCAAAAATGCTATAGC+GGG | + | chr5.4:42391207-42391226 | MS.gene78720:intron | 45.0% | |
| GAGTATTCCTACTACTGAGC+AGG | - | chr5.4:42394714-42394733 | None:intergenic | 45.0% | |
| GATGGCCAAAAATGGTGTGA+TGG | + | chr5.4:42395629-42395648 | MS.gene78720:CDS | 45.0% | |
| GCAAGTCAAACTGGGTGATA+AGG | + | chr5.4:42392886-42392905 | MS.gene78720:CDS | 45.0% | |
| GCGCCGAAAAATACATGATC+AGG | + | chr5.4:42392643-42392662 | MS.gene78720:CDS | 45.0% | |
| GCGCCGTAAAGAATGAAAGA+AGG | + | chr5.4:42391674-42391693 | MS.gene78720:intron | 45.0% | |
| GCTCAAAGATGCCGCAATTA+AGG | - | chr5.4:42395095-42395114 | None:intergenic | 45.0% | |
| GTATTCCTACTACTGAGCAG+GGG | - | chr5.4:42394712-42394731 | None:intergenic | 45.0% | |
| GTCACAGATTTGGGAGTAAC+CGG | - | chr5.4:42392962-42392981 | None:intergenic | 45.0% | |
| GTGAGCTTAGCTCAGTTTGT+AGG | + | chr5.4:42394946-42394965 | MS.gene78720:intron | 45.0% | |
| TAAAACGCAAGTCACCAACC+TGG | - | chr5.4:42392489-42392508 | None:intergenic | 45.0% | |
| TACCATCTCTAGTAGGAGAC+TGG | - | chr5.4:42395778-42395797 | None:intergenic | 45.0% | |
| TAGCATGATACCCGTGCATA+CGG | + | chr5.4:42393421-42393440 | MS.gene78720:intron | 45.0% | |
| TATATGAGTAGTGCAGGAGG+AGG | + | chr5.4:42392758-42392777 | MS.gene78720:CDS | 45.0% | |
| TATCTCATAACGCTACGCCA+TGG | + | chr5.4:42391855-42391874 | MS.gene78720:intron | 45.0% | |
| TCCAGACAATTCATCTGAGG+AGG | - | chr5.4:42395509-42395528 | None:intergenic | 45.0% | |
| TGACTTAGTCGAAACTCCGA+AGG | - | chr5.4:42395941-42395960 | None:intergenic | 45.0% | |
| TGGCACTTGCTTGCAAAATG+TGG | + | chr5.4:42392369-42392388 | MS.gene78720:CDS | 45.0% | |
| ! | AAAGCAACGACGGCGTTTTA+CGG | + | chr5.4:42391588-42391607 | MS.gene78720:intron | 45.0% |
| ! | AGGAGTGTAACATAGCCACT+TGG | + | chr5.4:42395346-42395365 | MS.gene78720:intron | 45.0% |
| ! | CTTTTGTCCACTAGCCATGA+TGG | - | chr5.4:42390310-42390329 | None:intergenic | 45.0% |
| ! | TTGACACCTTTTGGCAAACC+AGG | - | chr5.4:42392321-42392340 | None:intergenic | 45.0% |
| !! | CTGATGATGGCCAAAAATGG+TGG | + | chr5.4:42395624-42395643 | MS.gene78720:CDS | 45.0% |
| !! | TTCTTCCAGTTTTGTGCCAG+CGG | - | chr5.4:42392682-42392701 | None:intergenic | 45.0% |
| !!! | ACTTTTTTTTGGTGGTGGCC+GGG | - | chr5.4:42395009-42395028 | None:intergenic | 45.0% |
| !!! | CACCATTTTTGGCCATCATC+AGG | - | chr5.4:42395626-42395645 | None:intergenic | 45.0% |
| !!! | CGCTATAGCATTTTTGGGGT+CGG | - | chr5.4:42391208-42391227 | None:intergenic | 45.0% |
| !! | ATAAAATAAAATAAAAAAAG+GGG | + | chr5.4:42394638-42394657 | MS.gene78720:intron | 5.0% |
| !! | ATTTATGTTAAATAAAATAT+TGG | - | chr5.4:42393763-42393782 | None:intergenic | 5.0% |
| !!! | TTTTATTTTTGATAAAAAAA+AGG | + | chr5.4:42394051-42394070 | MS.gene78720:intron | 5.0% |
| AAAAAAAGGGGGACCTAGGC+TGG | + | chr5.4:42394650-42394669 | MS.gene78720:intron | 50.0% | |
| AAGGTTTACCTGGGGAATGG+CGG | - | chr5.4:42393044-42393063 | None:intergenic | 50.0% | |
| ACCTCTTCAAGGCACAGTGT+GGG | - | chr5.4:42394686-42394705 | None:intergenic | 50.0% | |
| AGCATGATACCCGTGCATAC+GGG | + | chr5.4:42393422-42393441 | MS.gene78720:intron | 50.0% | |
| AGCCAGTCTCCTACTAGAGA+TGG | + | chr5.4:42395773-42395792 | MS.gene78720:CDS | 50.0% | |
| AGGCTCAGGAGTCACAGATT+TGG | - | chr5.4:42392972-42392991 | None:intergenic | 50.0% | |
| ATGCAGACCATCATGGCTAG+TGG | + | chr5.4:42390300-42390319 | MS.gene78720:intron | 50.0% | |
| CAAACTGAGCTAAGCTCACG+AGG | - | chr5.4:42394945-42394964 | None:intergenic | 50.0% | |
| CAATTTGGGCAAGCCTTGGT+AGG | - | chr5.4:42390403-42390422 | None:intergenic | 50.0% | |
| CACAGTACGTACATGCTAGG+AGG | - | chr5.4:42395036-42395055 | None:intergenic | 50.0% | |
| CCAACAGCAGCAAGTCAAAC+TGG | + | chr5.4:42392877-42392896 | MS.gene78720:CDS | 50.0% | |
| CCGCAATTAAGGCCTATAGG+TGG | - | chr5.4:42395084-42395103 | None:intergenic | 50.0% | |
| CGCCATGGCTTATTGCATAG+CGG | + | chr5.4:42391870-42391889 | MS.gene78720:intron | 50.0% | |
| CTCTACCAGACCAAGCCAAA+TGG | - | chr5.4:42390823-42390842 | None:intergenic | 50.0% | |
| CTGACAATTTGGGCAAGCCT+TGG | - | chr5.4:42390407-42390426 | None:intergenic | 50.0% | |
| GAAATAGCGGTCATAGCGCT+AGG | - | chr5.4:42391239-42391258 | None:intergenic | 50.0% | |
| GACCGCTATGCAATAAGCCA+TGG | - | chr5.4:42391875-42391894 | None:intergenic | 50.0% | |
| GCCTCCTCAGATGAATTGTC+TGG | + | chr5.4:42395505-42395524 | MS.gene78720:intron | 50.0% | |
| GGCGTAGCGTTATGAGATAG+CGG | - | chr5.4:42391854-42391873 | None:intergenic | 50.0% | |
| GGCTCAGGAGTCACAGATTT+GGG | - | chr5.4:42392971-42392990 | None:intergenic | 50.0% | |
| TGGCTTATTGCATAGCGGTC+CGG | + | chr5.4:42391875-42391894 | MS.gene78720:intron | 50.0% | |
| ! | AGGACCAGAGCATCTGAAGA+AGG | + | chr5.4:42395847-42395866 | MS.gene78720:CDS | 50.0% |
| ! | ATGAGATAGCGGCGCAATAG+CGG | - | chr5.4:42391843-42391862 | None:intergenic | 50.0% |
| ! | CACCAACCTGGCAAGTTTTG+AGG | - | chr5.4:42392477-42392496 | None:intergenic | 50.0% |
| ! | GTGGTCATGGGTTTGTTTCG+TGG | - | chr5.4:42394288-42394307 | None:intergenic | 50.0% |
| !! | AGGGGTTTTTGAGCACCATG+TGG | + | chr5.4:42390955-42390974 | MS.gene78720:intron | 50.0% |
| !! | CCAGTTTGACTTGCTGCTGT+TGG | - | chr5.4:42392880-42392899 | None:intergenic | 50.0% |
| !!! | CTTTTTTTTGGTGGTGGCCG+GGG | - | chr5.4:42395008-42395027 | None:intergenic | 50.0% |
| AAGCTCACGAGGACGCTATG+AGG | - | chr5.4:42394934-42394953 | None:intergenic | 55.0% | |
| AATGTCCGGGGTTCAAACCC+CGG | + | chr5.4:42394988-42395007 | MS.gene78720:intron | 55.0% | |
| AGCTCACGAGGACGCTATGA+GGG | - | chr5.4:42394933-42394952 | None:intergenic | 55.0% | |
| AGGTTTACCTGGGGAATGGC+GGG | - | chr5.4:42393043-42393062 | None:intergenic | 55.0% | |
| ATATCTAACCCGGGCAACGC+CGG | + | chr5.4:42394509-42394528 | MS.gene78720:intron | 55.0% | |
| GACCTCTTCAAGGCACAGTG+TGG | - | chr5.4:42394687-42394706 | None:intergenic | 55.0% | |
| TCCCACACTGTGCCTTGAAG+AGG | + | chr5.4:42394682-42394701 | MS.gene78720:intron | 55.0% | |
| TGAGTACTCAGTAGCAGGGG+CGG | + | chr5.4:42393176-42393195 | MS.gene78720:intron | 55.0% | |
| TTCCTACTACTGAGCAGGGG+CGG | - | chr5.4:42394709-42394728 | None:intergenic | 55.0% | |
| TTGTGAGGGGCCATTTGGCT+TGG | + | chr5.4:42390810-42390829 | MS.gene78720:intron | 55.0% | |
| ! | GAGTGGCCTGGTTTGCCAAA+AGG | + | chr5.4:42392312-42392331 | MS.gene78720:CDS | 55.0% |
| ! | TGCATCGGGAGCATGTGATC+CGG | + | chr5.4:42390354-42390373 | MS.gene78720:CDS | 55.0% |
| AGGATTTGGGTGACGTCCGC+TGG | + | chr5.4:42392663-42392682 | MS.gene78720:CDS | 60.0% | |
| GACGTCCGCTGGCACAAAAC+TGG | + | chr5.4:42392674-42392693 | MS.gene78720:CDS | 60.0% | |
| GGCGCTATAGCGGCCAATAG+CGG | - | chr5.4:42391921-42391940 | None:intergenic | 60.0% | |
| TATCTAACCCGGGCAACGCC+GGG | + | chr5.4:42394510-42394529 | MS.gene78720:intron | 60.0% | |
| TGCTCACTCGCCCGTATGCA+CGG | - | chr5.4:42393435-42393454 | None:intergenic | 60.0% | |
| TTTAGAGACCCGGCGTTGCC+CGG | - | chr5.4:42394521-42394540 | None:intergenic | 60.0% | |
| ! | CTCAGTAGCAGGGGCGGATT+TGG | + | chr5.4:42393182-42393201 | MS.gene78720:intron | 60.0% |
| !! | AGGGGCCATTTGGCTTGGTC+TGG | + | chr5.4:42390815-42390834 | MS.gene78720:intron | 60.0% |
| AAGGGGGACCTAGGCTGGTG+TGG | + | chr5.4:42394655-42394674 | MS.gene78720:intron | 65.0% | |
| AGACACACCCGCCATTCCCC+AGG | + | chr5.4:42393033-42393052 | MS.gene78720:CDS | 65.0% | |
| AGCAGGGGCGGACCTCTTCA+AGG | - | chr5.4:42394697-42394716 | None:intergenic | 65.0% | |
| GCGGCCGCAACACTGCATAG+CGG | - | chr5.4:42391824-42391843 | None:intergenic | 65.0% | |
| GCTCACTCGCCCGTATGCAC+GGG | - | chr5.4:42393434-42393453 | None:intergenic | 65.0% | |
| GTCCGCCCCTGCTCAGTAGT+AGG | + | chr5.4:42394704-42394723 | MS.gene78720:intron | 65.0% | |
| TTAGAGACCCGGCGTTGCCC+GGG | - | chr5.4:42394520-42394539 | None:intergenic | 65.0% | |
| ! | TAGCGGATAGCGGCGCGTAG+CGG | + | chr5.4:42391182-42391201 | MS.gene78720:intron | 65.0% |
| !! | GGGAAGTGCCACACCAGCCT+AGG | - | chr5.4:42394666-42394685 | None:intergenic | 65.0% |
| GGTGGCCGGGGTTTGAACCC+CGG | - | chr5.4:42394996-42395015 | None:intergenic | 70.0% | |
| AGCGGCCAATAGCGGCCGCG+CGG | - | chr5.4:42391913-42391932 | None:intergenic | 75.0% | |
| CCAATAGCGGCCGCGCGGTG+CGG | - | chr5.4:42391908-42391927 | None:intergenic | 75.0% | |
| ! | CCGCACCGCGCGGCCGCTAT+TGG | + | chr5.4:42391905-42391924 | MS.gene78720:intron | 80.0% |
| ! | CGCGCGGTGCGGTGCGGTAC+CGG | - | chr5.4:42391897-42391916 | None:intergenic | 80.0% |
| ! | CGGTACCGCACCGCACCGCG+CGG | + | chr5.4:42391895-42391914 | MS.gene78720:intron | 80.0% |
| ! | AGCGGCCGCGCGGTGCGGTG+CGG | - | chr5.4:42391903-42391922 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 42389622 | 42396100 | 42389622 | ID=MS.gene78720 |
| chr5.4 | mRNA | 42389622 | 42396100 | 42389622 | ID=MS.gene78720.t1;Parent=MS.gene78720 |
| chr5.4 | exon | 42389622 | 42389629 | 42389622 | ID=MS.gene78720.t1.exon1;Parent=MS.gene78720.t1 |
| chr5.4 | CDS | 42389622 | 42389629 | 42389622 | ID=cds.MS.gene78720.t1;Parent=MS.gene78720.t1 |
| chr5.4 | exon | 42390306 | 42390447 | 42390306 | ID=MS.gene78720.t1.exon2;Parent=MS.gene78720.t1 |
| chr5.4 | CDS | 42390306 | 42390447 | 42390306 | ID=cds.MS.gene78720.t1;Parent=MS.gene78720.t1 |
| chr5.4 | exon | 42392303 | 42392489 | 42392303 | ID=MS.gene78720.t1.exon3;Parent=MS.gene78720.t1 |
| chr5.4 | CDS | 42392303 | 42392489 | 42392303 | ID=cds.MS.gene78720.t1;Parent=MS.gene78720.t1 |
| chr5.4 | exon | 42392570 | 42393054 | 42392570 | ID=MS.gene78720.t1.exon4;Parent=MS.gene78720.t1 |
| chr5.4 | CDS | 42392570 | 42393054 | 42392570 | ID=cds.MS.gene78720.t1;Parent=MS.gene78720.t1 |
| chr5.4 | exon | 42395506 | 42395964 | 42395506 | ID=MS.gene78720.t1.exon5;Parent=MS.gene78720.t1 |
| chr5.4 | CDS | 42395506 | 42395964 | 42395506 | ID=cds.MS.gene78720.t1;Parent=MS.gene78720.t1 |
| chr5.4 | exon | 42396044 | 42396100 | 42396044 | ID=MS.gene78720.t1.exon6;Parent=MS.gene78720.t1 |
| chr5.4 | CDS | 42396044 | 42396100 | 42396044 | ID=cds.MS.gene78720.t1;Parent=MS.gene78720.t1 |
| Gene Sequence |
| Protein sequence |
