AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene78949

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78949.t1 MTR_5g029370 96.934 848 23 2 32 879 1 845 0.0 1717
MS.gene78949.t1 MTR_5g029370 96.934 848 23 2 32 879 1 845 0.0 1717
MS.gene78949.t1 MTR_1g038400 57.851 484 203 1 102 584 10 493 0.0 586
MS.gene78949.t1 MTR_1g038370 51.230 488 211 4 114 600 2 463 2.55e-174 516
MS.gene78949.t1 MTR_3g075210 43.200 375 195 7 113 475 11 379 2.51e-80 285
MS.gene78949.t1 MTR_8g089260 37.717 403 172 10 117 451 30 421 4.97e-61 225
MS.gene78949.t1 MTR_1g078070 30.104 578 311 16 91 590 121 683 1.10e-59 221
MS.gene78949.t1 MTR_1g078070 30.104 578 311 16 91 590 121 683 1.31e-59 221
MS.gene78949.t1 MTR_2g047130 35.732 403 180 9 117 451 49 440 2.03e-58 217
MS.gene78949.t1 MTR_2g047130 35.732 403 180 9 117 451 46 437 2.25e-58 217
MS.gene78949.t1 MTR_7g407000 64.286 140 32 2 297 435 32 154 2.41e-57 194
MS.gene78949.t1 MTR_1g094740 51.064 188 88 1 264 451 291 474 2.49e-57 215
MS.gene78949.t1 MTR_5g010300 36.148 379 201 12 189 542 291 653 8.78e-54 204
MS.gene78949.t1 MTR_5g010300 36.148 379 201 12 189 542 291 653 9.09e-54 204
MS.gene78949.t1 MTR_5g010300 36.148 379 201 12 189 542 291 653 1.03e-53 204
MS.gene78949.t1 MTR_5g010300 36.043 369 196 11 189 533 291 643 6.25e-53 201
MS.gene78949.t1 MTR_7g097070 28.443 334 220 9 268 590 338 663 3.25e-32 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene78949.t1 AT5G46910 60.743 754 244 11 37 772 5 724 0.0 906
MS.gene78949.t1 AT5G46910 64.840 657 191 8 37 677 5 637 0.0 874
MS.gene78949.t1 AT3G48430 33.665 502 277 10 113 566 13 506 1.10e-67 246
MS.gene78949.t1 AT2G34880 31.707 533 274 12 117 576 58 573 2.43e-62 226
MS.gene78949.t1 AT1G30810 36.090 399 186 9 117 455 56 445 1.36e-61 224
MS.gene78949.t1 AT1G30810 36.090 399 186 9 117 455 56 445 1.36e-61 224
MS.gene78949.t1 AT1G30810 36.090 399 186 9 117 455 56 445 1.36e-61 224
MS.gene78949.t1 AT4G20400 34.483 406 190 9 117 456 53 448 9.01e-61 223
MS.gene78949.t1 AT1G08620 31.250 560 284 18 117 590 157 701 1.63e-59 221
MS.gene78949.t1 AT1G08620 31.250 560 284 18 117 590 143 687 2.01e-59 221
MS.gene78949.t1 AT1G08620 31.250 560 284 18 117 590 143 687 2.01e-59 221
MS.gene78949.t1 AT1G08620 31.250 560 284 18 117 590 143 687 2.01e-59 221
MS.gene78949.t1 AT1G63490 38.790 281 148 4 188 452 35 307 8.06e-59 219
MS.gene78949.t1 AT1G63490 38.790 281 148 4 188 452 288 560 9.93e-59 219
MS.gene78949.t1 AT1G63490 38.790 281 148 4 188 452 288 560 1.00e-58 219
MS.gene78949.t1 AT4G20400 34.430 395 183 9 128 456 7 391 5.25e-57 212
MS.gene78949.t1 AT5G04240 50.532 188 89 1 264 451 259 442 6.39e-56 210
MS.gene78949.t1 AT2G38950 25.760 559 330 19 114 611 102 636 5.47e-36 146
MS.gene78949.t1 AT1G63490 48.913 92 47 0 361 452 10 101 3.21e-24 110

Find 184 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTATAGACAGGGACTTTA+TGG 0.160704 5.3:-18329628 None:intergenic
ATTCTGATTCAGGAATATTT+AGG 0.200884 5.3:+18331734 MS.gene78949:CDS
CAAATCAACTTTGCGTCTAT+TGG 0.212579 5.3:+18329128 MS.gene78949:CDS
AAGGATATGAATACATATTT+TGG 0.248625 5.3:-18331189 None:intergenic
ATATCAACTTTATGATTAAC+AGG 0.250912 5.3:-18332073 None:intergenic
CAATAGACGCAAAGTTGATT+TGG 0.257289 5.3:-18329127 None:intergenic
ACATTGCCCCGGTGATTCTT+TGG 0.258512 5.3:-18327124 None:intergenic
TTATGGTCCATCAAAATATT+AGG 0.259778 5.3:-18329611 None:intergenic
TACACAGAATCAATTTGTTT+TGG 0.262680 5.3:+18331333 MS.gene78949:CDS
CTTGGTGATTGGTTTCCTCT+TGG 0.276385 5.3:+18329860 MS.gene78949:CDS
TTGGTGATTGGTTTCCTCTT+GGG 0.277791 5.3:+18329861 MS.gene78949:CDS
GACAGTGATGATTCTGATTC+AGG 0.278508 5.3:+18331724 MS.gene78949:CDS
ATTCCGTGAATATGAGAAAA+TGG 0.282693 5.3:+18328741 MS.gene78949:CDS
GGAGATATGCACTTCTTAAC+AGG 0.290366 5.3:+18329897 MS.gene78949:CDS
GGATTATTTGTTGGCAGTCC+TGG 0.299371 5.3:-18331301 None:intergenic
GCTCCAGAAGCTTCTAAATA+TGG 0.300151 5.3:+18327679 MS.gene78949:CDS
GGAAATTGGTCGTGGGAAAA+TGG 0.302113 5.3:+18328840 MS.gene78949:CDS
ATCACTGTCATTATCCACTA+TGG 0.307424 5.3:-18331710 None:intergenic
CCATAAAGTCCCTGTCTATA+AGG 0.310054 5.3:+18329628 MS.gene78949:CDS
TAAGTTTGATACAAGCGATT+TGG 0.321047 5.3:+18327570 MS.gene78949:CDS
TTCTGATTCAGGAATATTTA+GGG 0.330786 5.3:+18331735 MS.gene78949:CDS
GCCTCTCCGCCTTGCTGAAT+GGG 0.334178 5.3:+18328591 MS.gene78949:CDS
ACGTCAGACACTTCTGGTTT+AGG 0.338162 5.3:-18331373 None:intergenic
GAGAGAGGATATTACGGATA+TGG 0.346339 5.3:+18331096 MS.gene78949:CDS
CTTACTTGGAAAAGGAGTTT+TGG 0.351864 5.3:+18328815 MS.gene78949:CDS
TCAAGTTTAAGCTCACAATA+AGG 0.353382 5.3:-18331253 None:intergenic
CTTTGCAAAGAAGTTCTTCA+TGG 0.354153 5.3:-18329934 None:intergenic
AGCCTCTCCGCCTTGCTGAA+TGG 0.359090 5.3:+18328590 MS.gene78949:CDS
AATAGACGCAAAGTTGATTT+GGG 0.363852 5.3:-18329126 None:intergenic
ATACCATATTTAGAAGCTTC+TGG 0.364051 5.3:-18327682 None:intergenic
CCTCGGACTTTGAGTCGCTT+TGG 0.366952 5.3:-18332262 None:intergenic
TTGAGTGCTTCTGTACCTGC+TGG 0.368641 5.3:+18328517 MS.gene78949:CDS
GGAGAATACACAGGACATTC+TGG 0.368911 5.3:-18327610 None:intergenic
AAGGAAACGTCAGACACTTC+TGG 0.371873 5.3:-18331379 None:intergenic
TATTATTTCAGAAACTTTCC+CGG 0.373608 5.3:+18329100 MS.gene78949:intron
ATTATGCTTTGCGTTGATAT+CGG 0.374229 5.3:+18327088 None:intergenic
AACAGATTTGCAAGGGGAAA+TGG 0.376372 5.3:+18332112 MS.gene78949:CDS
CCTTGCAAATCTGTTCTTCG+AGG 0.382466 5.3:-18332104 None:intergenic
GGAGGAATTTGAAGATCCTT+TGG 0.383247 5.3:+18327639 MS.gene78949:CDS
CAATCTGAGGAGGTTAGAAA+TGG 0.383523 5.3:+18327376 MS.gene78949:CDS
TCCACTATGGGCTTGATGTC+AGG 0.386848 5.3:-18331697 None:intergenic
TGAGCAGGAAGATGGGATAT+TGG 0.390426 5.3:+18331138 MS.gene78949:CDS
TCTTCAAATTCCTCCTTTGT+TGG 0.392588 5.3:-18327631 None:intergenic
TGGAGCCTTTGACGTTCTCT+TGG 0.392797 5.3:+18329568 MS.gene78949:CDS
GGAGCCTTTGACGTTCTCTT+GGG 0.394203 5.3:+18329569 MS.gene78949:CDS
ATGTCTTCCTGCCACTTACT+TGG 0.401021 5.3:+18328801 MS.gene78949:CDS
GCAAAGTTGATTTGGGTAAC+CGG 0.403678 5.3:-18329119 None:intergenic
GAAGCGCCTTCCATTGAGAT+TGG 0.409859 5.3:+18332238 MS.gene78949:CDS
GAAAAGAAATCTGAAGGTTA+TGG 0.414459 5.3:+18331786 MS.gene78949:CDS
ATATTTATCACTTGATTCAC+TGG 0.418019 5.3:-18332047 None:intergenic
TATCCCTGGTCACGCAGCTT+TGG 0.422015 5.3:+18329481 MS.gene78949:CDS
CCACACTCTGGATTATTTGT+TGG 0.427777 5.3:-18331310 None:intergenic
TTCAAAACATTCTGAGCAGC+AGG 0.432668 5.3:+18331810 MS.gene78949:CDS
ATCAGCTTGGGAACAGCAAA+TGG 0.440002 5.3:+18328920 MS.gene78949:CDS
TCTATTGGAAACGTCAATTC+CGG 0.440096 5.3:+18329143 MS.gene78949:CDS
TTATCTGAGAGAGGATATTA+CGG 0.445667 5.3:+18331090 MS.gene78949:CDS
TGGTGATTGGTTTCCTCTTG+GGG 0.449362 5.3:+18329862 MS.gene78949:CDS
TGAAACATCTTACAGGTAGA+AGG 0.451605 5.3:+18327340 MS.gene78949:intron
TTGTCAAGTGATGGAGAAGA+TGG 0.453056 5.3:+18329548 MS.gene78949:CDS
TTGATACAAGCGATTTGGAT+TGG 0.454805 5.3:+18327575 MS.gene78949:CDS
TGAGTGCTTCTGTACCTGCT+GGG 0.455362 5.3:+18328518 MS.gene78949:CDS
AATTCCAAAGCTGCGTGACC+AGG 0.455551 5.3:-18329485 None:intergenic
AAGAGTGGATGCAGCAGAAA+AGG 0.456673 5.3:-18331398 None:intergenic
CGCAGCTTTGGAATTTGAAA+GGG 0.456897 5.3:+18329493 MS.gene78949:CDS
GTTGGTTACTAATGAAATCA+AGG 0.462719 5.3:+18330080 MS.gene78949:CDS
AAGCCTGCATGGTACGCTCT+AGG 0.463569 5.3:-18329686 None:intergenic
GCTTTGCGTTGATATCGGTC+TGG 0.467033 5.3:+18327093 MS.gene78949:CDS
CTCTTGGGGCTATTGCAAGC+AGG 0.475256 5.3:+18329876 MS.gene78949:CDS
GTTTCCAGCATTGTGCTAGT+TGG 0.477992 5.3:+18330062 MS.gene78949:CDS
AAGCGCCTTCCATTGAGATT+GGG 0.478973 5.3:+18332239 MS.gene78949:CDS
AAGATGTTTGAGCAGGAAGA+TGG 0.480595 5.3:+18331130 MS.gene78949:CDS
TATAAGGCTGTTCAAAAGCC+AGG 0.481451 5.3:+18329644 MS.gene78949:CDS
TTCTCTGCTTTAAGAGAGGA+AGG 0.482228 5.3:-18331766 None:intergenic
TCCTGCCACTTACTTGGAAA+AGG 0.482416 5.3:+18328807 MS.gene78949:CDS
CACTGCATTCTTTAGGCTGA+GGG 0.482599 5.3:+18331568 MS.gene78949:intron
TTTGCTGAAACCTCTCTCTT+CGG 0.483361 5.3:-18332207 None:intergenic
AGAAGATTCGCATGCACTGT+TGG 0.484598 5.3:-18331620 None:intergenic
TGGAGGATCATTATTTGTAC+AGG 0.487458 5.3:+18329299 MS.gene78949:CDS
AGTTCTTCATGGGGCAGTAA+AGG 0.488348 5.3:-18329923 None:intergenic
GCACGAAGATATTGCAGTGC+TGG 0.492162 5.3:+18328778 MS.gene78949:CDS
TCCTGTGTATTCTCCAACAA+AGG 0.493715 5.3:+18327618 MS.gene78949:CDS
TTTCAGAGAGCTGAAGCAAA+TGG 0.495918 5.3:+18331223 MS.gene78949:CDS
TGCAGCAAAGATGTTTGAGC+AGG 0.497284 5.3:+18331123 MS.gene78949:CDS
CTCGAAGAACAGATTTGCAA+GGG 0.497948 5.3:+18332105 MS.gene78949:CDS
GAACAGCAAATGGAATTTGA+AGG 0.498848 5.3:+18328930 MS.gene78949:CDS
ACGCAGCTTTGGAATTTGAA+AGG 0.502422 5.3:+18329492 MS.gene78949:CDS
TTGAGAGGTTCACCTTCTTG+TGG 0.502769 5.3:+18327499 MS.gene78949:CDS
TTCATTAAAACAACCCCAGC+AGG 0.503191 5.3:-18328532 None:intergenic
GTAACCAACTAGCACAATGC+TGG 0.505912 5.3:-18330066 None:intergenic
TTTGCAAAGAAGTTCTTCAT+GGG 0.510875 5.3:-18329933 None:intergenic
GAATATGCATGTGATGTTGA+TGG 0.516379 5.3:+18328871 MS.gene78949:CDS
ATCAGTAGGAGAAGTTGAAA+AGG 0.523872 5.3:-18328899 None:intergenic
GATGCTTATTCATTCAAGCT+TGG 0.528112 5.3:+18329961 MS.gene78949:CDS
CAGCATTCCAATGTATAGCA+TGG 0.528642 5.3:-18329254 None:intergenic
TCGCTTTGGCCCAATCTCAA+TGG 0.528894 5.3:-18332248 None:intergenic
TTCCCTAGAGCGTACCATGC+AGG 0.529080 5.3:+18329683 MS.gene78949:CDS
CAAAGTTGATTTGGGTAACC+GGG 0.532287 5.3:-18329118 None:intergenic
TGCTGTTTAGTATGTTTGCA+TGG 0.532827 5.3:+18329272 MS.gene78949:CDS
AGCCTGCATGGTACGCTCTA+GGG 0.534040 5.3:-18329685 None:intergenic
AGGTAGAGTAAGACAATCTG+AGG 0.536728 5.3:+18327363 MS.gene78949:CDS
TGATTCTGTGTACCACACTC+TGG 0.536807 5.3:-18331322 None:intergenic
CTGGTTGTAAACTTGAATCC+AGG 0.537765 5.3:-18328562 None:intergenic
AAAACTTGGTATGGTATCCC+TGG 0.538981 5.3:+18329467 MS.gene78949:CDS
CCTCGAAGAACAGATTTGCA+AGG 0.541170 5.3:+18332104 MS.gene78949:CDS
CTTCTCCTACTGATCAGCTT+GGG 0.543251 5.3:+18328908 MS.gene78949:CDS
ACCTGACATCAAGCCCATAG+TGG 0.543321 5.3:+18331696 MS.gene78949:CDS
GAGCTTTCATGATACAAAGC+AGG 0.543891 5.3:-18331649 None:intergenic
TGCTTTGTATCATGAAAGCT+CGG 0.546043 5.3:+18331651 MS.gene78949:CDS
AGCTTTGGAATTTGAAAGGG+TGG 0.546161 5.3:+18329496 MS.gene78949:CDS
ACTTGTCTGAGTGGCAGCAA+TGG 0.548160 5.3:-18327440 None:intergenic
ACTTCTCCTACTGATCAGCT+TGG 0.549870 5.3:+18328907 MS.gene78949:CDS
AACCATGACTGAAGCCTGCA+TGG 0.553458 5.3:-18329697 None:intergenic
TTACCATGGCGTAAGCATAC+AGG 0.555597 5.3:-18330205 None:intergenic
AGTGTTTCTTCTCATTCGCA+TGG 0.557562 5.3:+18330112 MS.gene78949:CDS
AAGGCGGAGAGGCTGCACTC+TGG 0.558918 5.3:-18328581 None:intergenic
TCACTGTCATTATCCACTAT+GGG 0.560366 5.3:-18331709 None:intergenic
TCTTGTGGCACGAGATTGCA+TGG 0.561186 5.3:+18327514 MS.gene78949:CDS
TGCAATCTCGTGCCACAAGA+AGG 0.561867 5.3:-18327511 None:intergenic
AGATGTTTGAGCAGGAAGAT+GGG 0.562717 5.3:+18331131 MS.gene78949:CDS
AAATCTCTTGACCTCATCTG+TGG 0.564286 5.3:+18331052 MS.gene78949:CDS
GAGCCTTTGACGTTCTCTTG+GGG 0.569053 5.3:+18329570 MS.gene78949:CDS
CTGTTCCCAAGCTGATCAGT+AGG 0.569260 5.3:-18328913 None:intergenic
TGGTCCATCAAAATATTAGG+TGG 0.570687 5.3:-18329608 None:intergenic
TACCATGCAGGCTTCAGTCA+TGG 0.571674 5.3:+18329695 MS.gene78949:CDS
ATAAGGCTGTTCAAAAGCCA+GGG 0.571901 5.3:+18329645 MS.gene78949:CDS
AATCTGAGGAGGTTAGAAAT+GGG 0.573649 5.3:+18327377 MS.gene78949:CDS
AAGGTTATTACAAACTCCCC+TGG 0.576603 5.3:-18329662 None:intergenic
GCTTTGTTTCAAAGTAGTTG+TGG 0.577676 5.3:+18327165 MS.gene78949:CDS
ATGAGATAACAAGTCTGAAG+AGG 0.577900 5.3:-18330005 None:intergenic
TTTCCCCAAGAGAACGTCAA+AGG 0.580508 5.3:-18329573 None:intergenic
ACAGAACCCATGCTATACAT+TGG 0.582151 5.3:+18329247 MS.gene78949:CDS
TTGGTTACTAATGAAATCAA+GGG 0.584367 5.3:+18330081 MS.gene78949:CDS
AGCAGAGAAAAGAAATCTGA+AGG 0.584819 5.3:+18331780 MS.gene78949:CDS
GCTGAAACCTCTCTCTTCGG+TGG 0.588015 5.3:-18332204 None:intergenic
TTCTGAAAGAGAACAAAGAG+TGG 0.588446 5.3:-18331413 None:intergenic
TTTGGCAGGAAATTGGTCGT+GGG 0.589186 5.3:+18328833 MS.gene78949:CDS
TAGTATGTTTGCATGGCATG+TGG 0.590708 5.3:+18329279 MS.gene78949:CDS
AGCATTCCAATGTATAGCAT+GGG 0.591957 5.3:-18329253 None:intergenic
ATATGAGAAAATGGCAAACA+AGG 0.593266 5.3:+18328750 MS.gene78949:CDS
TGAGATAACAAGTCTGAAGA+GGG 0.601071 5.3:-18330004 None:intergenic
AGCTTTCATGATACAAAGCA+GGG 0.602726 5.3:-18331648 None:intergenic
GAGTGCTTCTGTACCTGCTG+GGG 0.605225 5.3:+18328519 MS.gene78949:CDS
GAGGGGAATTGTGAAGAACT+TGG 0.605479 5.3:+18331586 MS.gene78949:CDS
TTTGGCCCAATCTCAATGGA+AGG 0.605929 5.3:-18332244 None:intergenic
TTGAAGAAAGTCCTTCCTGA+AGG 0.607024 5.3:+18331992 MS.gene78949:CDS
ATCTTCTGCAAATAAACCAA+AGG 0.609064 5.3:-18327655 None:intergenic
TCCTTTGTTGGAGAATACAC+AGG 0.609723 5.3:-18327619 None:intergenic
CTCTGAAACATATCTGACAA+AGG 0.609736 5.3:-18331208 None:intergenic
AATCATGCAAAACATTGCCC+CGG 0.611248 5.3:-18327135 None:intergenic
AAAATTCTAGGTTTCAACTG+TGG 0.612221 5.3:+18329818 MS.gene78949:intron
ATTCCAAAGCTGCGTGACCA+GGG 0.613347 5.3:-18329484 None:intergenic
CATAACAGTCACGTTTGCAA+AGG 0.613703 5.3:-18330150 None:intergenic
AGTGGAGGAGATGCTTTGAG+AGG 0.620104 5.3:+18327484 MS.gene78949:CDS
AATCTCTTGACCTCATCTGT+GGG 0.626666 5.3:+18331053 MS.gene78949:CDS
GCAGGTACAGAAGCACTCAA+AGG 0.631676 5.3:-18328514 None:intergenic
TGTGTTTGCTCCCACAGATG+AGG 0.633446 5.3:-18331063 None:intergenic
ACACACTCTTTATCTGAGAG+AGG 0.633663 5.3:+18331081 MS.gene78949:CDS
TGTGTATTCTCCAACAAAGG+AGG 0.634871 5.3:+18327621 MS.gene78949:CDS
CTTCAGTATCCCATTCAGCA+AGG 0.636604 5.3:-18328600 None:intergenic
GTTAGCAGCACTTGTCTGAG+TGG 0.638870 5.3:-18327449 None:intergenic
TCCCATTCAGCAAGGCGGAG+AGG 0.639564 5.3:-18328592 None:intergenic
TTTGAACAGCCTTATAGACA+GGG 0.640431 5.3:-18329637 None:intergenic
GGAGCAGAGGAACACTCATG+AGG 0.642624 5.3:-18331436 None:intergenic
AACGTGATGAATAGAAGTGG+AGG 0.643226 5.3:+18327469 MS.gene78949:CDS
TCTCTGCTTTAAGAGAGGAA+GGG 0.650459 5.3:-18331765 None:intergenic
TATGTTTGCATGGCATGTGG+AGG 0.652368 5.3:+18329282 MS.gene78949:CDS
CCAAAGCGACTCAAAGTCCG+AGG 0.653371 5.3:+18332262 MS.gene78949:CDS
CATCCTGTATGCTTACGCCA+TGG 0.654178 5.3:+18330202 MS.gene78949:CDS
AAGATCACCACCGAAGAGAG+AGG 0.658877 5.3:+18332197 MS.gene78949:CDS
TCGAAGAACAGATTTGCAAG+GGG 0.659146 5.3:+18332106 MS.gene78949:CDS
GAGATATGCACTTCTTAACA+GGG 0.660720 5.3:+18329898 MS.gene78949:CDS
CTGCTTGCAATAGCCCCAAG+AGG 0.661556 5.3:-18329875 None:intergenic
TGCATGGTACGCTCTAGGGA+AGG 0.661692 5.3:-18329681 None:intergenic
TTGCAAAGAAGTTCTTCATG+GGG 0.664478 5.3:-18329932 None:intergenic
TAGAGTAAGACAATCTGAGG+AGG 0.665323 5.3:+18327366 MS.gene78949:CDS
TATCAACTTTATGATTAACA+GGG 0.667769 5.3:-18332072 None:intergenic
GCTAACGTGATGAATAGAAG+TGG 0.674460 5.3:+18327466 MS.gene78949:CDS
CCAACAAATAATCCAGAGTG+TGG 0.694859 5.3:+18331310 MS.gene78949:CDS
ACTGCATTCTTTAGGCTGAG+GGG 0.698405 5.3:+18331569 MS.gene78949:intron
AACATCTTACAGGTAGAAGG+AGG 0.700370 5.3:+18327343 MS.gene78949:intron
CAGTATCCCATTCAGCAAGG+CGG 0.708241 5.3:-18328597 None:intergenic
TAAGGCTGTTCAAAAGCCAG+GGG 0.708748 5.3:+18329646 MS.gene78949:CDS
GCTTTCATGATACAAAGCAG+GGG 0.718139 5.3:-18331647 None:intergenic
AGCATTAACTATCAGCACTG+CGG 0.747153 5.3:+18329437 MS.gene78949:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTGATATTATTATTTATA+TGG + chr5.3:18329407-18329426 MS.gene78949:intron 10.0%
!! TATTATTATTTATATGGTAA+TGG + chr5.3:18329413-18329432 MS.gene78949:intron 10.0%
!!! ATGAATTTTAATTATATTTG+AGG + chr5.3:18330507-18330526 MS.gene78949:intron 10.0%
!!! GAATATAATATTATTTTGTT+TGG + chr5.3:18330294-18330313 MS.gene78949:intron 10.0%
!! AAAATAATCATGGATATTAT+TGG + chr5.3:18330330-18330349 MS.gene78949:intron 15.0%
!! AAGTTGTTATAAAATAATCA+TGG + chr5.3:18330320-18330339 MS.gene78949:intron 15.0%
!! AATATGATAAATAAATAACG+GGG - chr5.3:18329003-18329022 None:intergenic 15.0%
!! CAATATGATAAATAAATAAC+GGG - chr5.3:18329004-18329023 None:intergenic 15.0%
!! CCAATATGATAAATAAATAA+CGG - chr5.3:18329005-18329024 None:intergenic 15.0%
!!! CAAAAATTATTAGTTTTCAT+AGG - chr5.3:18330703-18330722 None:intergenic 15.0%
!!! GATATATTAATTTGTGATAA+TGG + chr5.3:18330580-18330599 MS.gene78949:intron 15.0%
!!! TTAATATCTTGTTTGAATAT+TGG + chr5.3:18331488-18331507 MS.gene78949:intron 15.0%
!! AAATGACAACTAAAAATGAA+TGG - chr5.3:18330656-18330675 None:intergenic 20.0%
!! ATATCAACTTTATGATTAAC+AGG - chr5.3:18332076-18332095 None:intergenic 20.0%
!! ATGAGATAAAAATAATGTCA+AGG - chr5.3:18330760-18330779 None:intergenic 20.0%
!! ATTAAATATGCAACTTAAGA+AGG - chr5.3:18329385-18329404 None:intergenic 20.0%
!! ATTCGATAAGTTTATTAACA+TGG - chr5.3:18329070-18329089 None:intergenic 20.0%
!! CCGTTATTTATTTATCATAT+TGG + chr5.3:18329002-18329021 MS.gene78949:intron 20.0%
!! TATCAACTTTATGATTAACA+GGG - chr5.3:18332075-18332094 None:intergenic 20.0%
!! TGAGATAAAAATAATGTCAA+GGG - chr5.3:18330759-18330778 None:intergenic 20.0%
!!! AAAATTATTTTTGGAAGCTT+GGG + chr5.3:18330272-18330291 MS.gene78949:intron 20.0%
!!! AAAGCATTTTAACAAAATGA+CGG + chr5.3:18329027-18329046 MS.gene78949:intron 20.0%
!!! AAGGATATGAATACATATTT+TGG - chr5.3:18331192-18331211 None:intergenic 20.0%
!!! AATGCATGCAAAATTATTTT+TGG + chr5.3:18330263-18330282 MS.gene78949:intron 20.0%
!!! AATTTTGATCTATATGAACA+GGG + chr5.3:18331959-18331978 MS.gene78949:intron 20.0%
!!! ATAATGGATAATGATGAATA+TGG - chr5.3:18327865-18327884 None:intergenic 20.0%
!!! ATTAAAATTCATATTTGCTG+AGG - chr5.3:18330499-18330518 None:intergenic 20.0%
!!! ATTATTAGTTTTCATAGGTA+TGG - chr5.3:18330698-18330717 None:intergenic 20.0%
!!! ATTCAAAACACTTACATTTT+TGG - chr5.3:18331461-18331480 None:intergenic 20.0%
!!! ATTTGAATTTTTGATATTCC+AGG + chr5.3:18328472-18328491 MS.gene78949:intron 20.0%
!!! CATTTTTAGTTGTCATTTTA+AGG + chr5.3:18330658-18330677 MS.gene78949:intron 20.0%
!!! TAATGGATAATGATGAATAT+GGG - chr5.3:18327864-18327883 None:intergenic 20.0%
!!! TAATTTTGATCTATATGAAC+AGG + chr5.3:18331958-18331977 MS.gene78949:intron 20.0%
!!! TGTTTTGAGTTTTTTCAAAT+AGG - chr5.3:18328317-18328336 None:intergenic 20.0%
!!! TTATTAGTTTTCATAGGTAT+GGG - chr5.3:18330697-18330716 None:intergenic 20.0%
!!! TTCAAAACACTTACATTTTT+GGG - chr5.3:18331460-18331479 None:intergenic 20.0%
!!! TTCTGAATAAACTTGTTATT+TGG + chr5.3:18327991-18328010 MS.gene78949:intron 20.0%
!!! TTTTTATATCTTGCTGAAAT+GGG - chr5.3:18332142-18332161 None:intergenic 20.0%
! AACAAGTAAAAAGGAAGAAA+GGG + chr5.3:18330882-18330901 MS.gene78949:intron 25.0%
! AATCATTACATCAGCAAATA+AGG - chr5.3:18328189-18328208 None:intergenic 25.0%
! ACAATTTGTATATAGGAAAC+CGG - chr5.3:18328231-18328250 None:intergenic 25.0%
! ATAAAAATAATGTCAAGGGT+CGG - chr5.3:18330755-18330774 None:intergenic 25.0%
! ATATTTATCACTTGATTCAC+TGG - chr5.3:18332050-18332069 None:intergenic 25.0%
! ATGCATTTAATGTGTAGTAT+CGG - chr5.3:18329769-18329788 None:intergenic 25.0%
! ATTATCCATTATCCTTTGTT+TGG + chr5.3:18327873-18327892 MS.gene78949:intron 25.0%
! ATTATCTAAATTCTAGACCA+TGG + chr5.3:18330920-18330939 MS.gene78949:intron 25.0%
! ATTCTGATTCAGGAATATTT+AGG + chr5.3:18331734-18331753 MS.gene78949:CDS 25.0%
! CACAACTACAATTTGTATAT+AGG - chr5.3:18328238-18328257 None:intergenic 25.0%
! CATTGAAAAACTATGTTAGA+AGG - chr5.3:18330415-18330434 None:intergenic 25.0%
! CGTATCTTCAATAAAATTCT+AGG + chr5.3:18329806-18329825 MS.gene78949:intron 25.0%
! GAGGATTTAATATATTTGCT+GGG - chr5.3:18330480-18330499 None:intergenic 25.0%
! TAAGATAACGACAAAGTAAT+TGG - chr5.3:18330621-18330640 None:intergenic 25.0%
! TACAAAAGCAACAAGTAAAA+AGG + chr5.3:18330873-18330892 MS.gene78949:intron 25.0%
! TATAAAAGAGACACTAGTAA+AGG - chr5.3:18328961-18328980 None:intergenic 25.0%
! TATTATTTCAGAAACTTTCC+CGG + chr5.3:18329100-18329119 MS.gene78949:intron 25.0%
! TGAGGATTTAATATATTTGC+TGG - chr5.3:18330481-18330500 None:intergenic 25.0%
! TTATCTAAATTCTAGACCAT+GGG + chr5.3:18330921-18330940 MS.gene78949:intron 25.0%
! TTATGGTCCATCAAAATATT+AGG - chr5.3:18329614-18329633 None:intergenic 25.0%
! TTATGTAAGATAGAGAATGT+TGG - chr5.3:18331928-18331947 None:intergenic 25.0%
! TTCTGATTCAGGAATATTTA+GGG + chr5.3:18331735-18331754 MS.gene78949:CDS 25.0%
! TTGGTTACTAATGAAATCAA+GGG + chr5.3:18330081-18330100 MS.gene78949:CDS 25.0%
!! ATACTTTTACCACTTCAATA+TGG + chr5.3:18327796-18327815 MS.gene78949:intron 25.0%
!! ATTCTTTTTGTGTCTTACAT+TGG + chr5.3:18329206-18329225 MS.gene78949:intron 25.0%
!! ATTGAATTTTATACAACTCC+AGG + chr5.3:18331283-18331302 MS.gene78949:CDS 25.0%
!! ATTTGCTGATGTAATGATTA+TGG + chr5.3:18328190-18328209 MS.gene78949:intron 25.0%
!! CTTTTTATATCTTGCTGAAA+TGG - chr5.3:18332143-18332162 None:intergenic 25.0%
!! TTCTTTTTGTGTCTTACATT+GGG + chr5.3:18329207-18329226 MS.gene78949:intron 25.0%
!! TTTGAAACTGAAAAGCAAAT+AGG + chr5.3:18330837-18330856 MS.gene78949:intron 25.0%
!!! ACACAGAATCAATTTGTTTT+GGG + chr5.3:18331334-18331353 MS.gene78949:CDS 25.0%
!!! ATACATATTTTGGTCACTTT+TGG - chr5.3:18331182-18331201 None:intergenic 25.0%
!!! ATTGTTTTGTCAATAATACC+CGG - chr5.3:18330798-18330817 None:intergenic 25.0%
!!! ATTTCCACCTAATATTTTGA+TGG + chr5.3:18329604-18329623 MS.gene78949:CDS 25.0%
!!! CAAAATTATTTTTGGAAGCT+TGG + chr5.3:18330271-18330290 MS.gene78949:intron 25.0%
!!! TACACAGAATCAATTTGTTT+TGG + chr5.3:18331333-18331352 MS.gene78949:CDS 25.0%
!!! TAGAATTTTTGAAGCGTAAA+AGG + chr5.3:18327401-18327420 MS.gene78949:CDS 25.0%
!!! TATTAGTTTTCATAGGTATG+GGG - chr5.3:18330696-18330715 None:intergenic 25.0%
!!! TTCTGGAATTCTAAATCATA+TGG + chr5.3:18330354-18330373 MS.gene78949:intron 25.0%
AAAATTCTAGGTTTCAACTG+TGG + chr5.3:18329818-18329837 MS.gene78949:intron 30.0%
AAATAAGGAACTTCTTGGAA+AGG - chr5.3:18328174-18328193 None:intergenic 30.0%
AACTCAATAGACTTACTAAC+AGG + chr5.3:18328349-18328368 MS.gene78949:intron 30.0%
AATAGACTTACTAACAGGTA+TGG + chr5.3:18328354-18328373 MS.gene78949:intron 30.0%
AATTTACCATGTCCTCTTTA+CGG + chr5.3:18328398-18328417 MS.gene78949:intron 30.0%
ACATACCAAAACTAACATAC+TGG - chr5.3:18330559-18330578 None:intergenic 30.0%
ATACCATATTTAGAAGCTTC+TGG - chr5.3:18327685-18327704 None:intergenic 30.0%
ATATAAAAAGTCAGGCAATG+AGG + chr5.3:18332153-18332172 MS.gene78949:CDS 30.0%
ATATGAGAAAATGGCAAACA+AGG + chr5.3:18328750-18328769 MS.gene78949:CDS 30.0%
ATCTTCTGCAAATAAACCAA+AGG - chr5.3:18327658-18327677 None:intergenic 30.0%
ATGGAAACTAATCCAAACAA+AGG - chr5.3:18327888-18327907 None:intergenic 30.0%
ATTCCGTGAATATGAGAAAA+TGG + chr5.3:18328741-18328760 MS.gene78949:CDS 30.0%
CAACAAGTAAAAAGGAAGAA+AGG + chr5.3:18330881-18330900 MS.gene78949:intron 30.0%
CATACCAAAACTAACATACT+GGG - chr5.3:18330558-18330577 None:intergenic 30.0%
CGCAAGAATTTCAATGTTTA+TGG + chr5.3:18327953-18327972 MS.gene78949:intron 30.0%
CTAATCCAAACAAAGGATAA+TGG - chr5.3:18327881-18327900 None:intergenic 30.0%
GAAAAGAAATCTGAAGGTTA+TGG + chr5.3:18331786-18331805 MS.gene78949:CDS 30.0%
GAAATAATCTTGCATATACC+TGG - chr5.3:18328493-18328512 None:intergenic 30.0%
GACATAAGAAATTGTCATAC+CGG - chr5.3:18329165-18329184 None:intergenic 30.0%
GTAAGATGTTTCACATTTCA+CGG - chr5.3:18327333-18327352 None:intergenic 30.0%
GTAATGATTATGGTCTTTGA+TGG + chr5.3:18328200-18328219 MS.gene78949:intron 30.0%
GTTGGTTACTAATGAAATCA+AGG + chr5.3:18330080-18330099 MS.gene78949:CDS 30.0%
GTTTCACGATAGAAAATGAA+TGG - chr5.3:18328290-18328309 None:intergenic 30.0%
TAAGTTTGATACAAGCGATT+TGG + chr5.3:18327570-18327589 MS.gene78949:CDS 30.0%
TAATTGAAGCTACTATACGA+TGG - chr5.3:18327907-18327926 None:intergenic 30.0%
TAGTTAATTAGTAAACCCTG+TGG + chr5.3:18327742-18327761 MS.gene78949:intron 30.0%
TCAAGTTTAAGCTCACAATA+AGG - chr5.3:18331256-18331275 None:intergenic 30.0%
TCAGCAAGATATAAAAAGTC+AGG + chr5.3:18332145-18332164 MS.gene78949:CDS 30.0%
TGAAATGTGAAACATCTTAC+AGG + chr5.3:18327333-18327352 MS.gene78949:intron 30.0%
TGCATTTAATGTGTAGTATC+GGG - chr5.3:18329768-18329787 None:intergenic 30.0%
TTATCTGAGAGAGGATATTA+CGG + chr5.3:18331090-18331109 MS.gene78949:CDS 30.0%
TTTGCAAAGAAGTTCTTCAT+GGG - chr5.3:18329936-18329955 None:intergenic 30.0%
TTTGTCACAAATTTATCCCA+TGG - chr5.3:18330940-18330959 None:intergenic 30.0%
! AAAGTCACATTTTTCATGAG+TGG + chr5.3:18328625-18328644 MS.gene78949:CDS 30.0%
! AATAGACGCAAAGTTGATTT+GGG - chr5.3:18329129-18329148 None:intergenic 30.0%
! ACATGCAAGGATAATTTTGA+AGG - chr5.3:18327292-18327311 None:intergenic 30.0%
! ACTGATATTTTGTCAAGTGA+TGG + chr5.3:18329539-18329558 MS.gene78949:CDS 30.0%
! TGTTTCAGTTTGTTCATTGT+TGG + chr5.3:18327202-18327221 MS.gene78949:intron 30.0%
! TTCATTTTCCAAAGAATCAC+CGG + chr5.3:18327116-18327135 MS.gene78949:CDS 30.0%
!! TCATGGATATTATTGGTTTC+TGG + chr5.3:18330337-18330356 MS.gene78949:intron 30.0%
!!! ATTAGTTTTCATAGGTATGG+GGG - chr5.3:18330695-18330714 None:intergenic 30.0%
!!! CACAGAATCAATTTGTTTTG+GGG + chr5.3:18331335-18331354 MS.gene78949:CDS 30.0%
!!! TTGCCATTTTCTCATATTCA+CGG - chr5.3:18328747-18328766 None:intergenic 30.0%
AATATGGTATGTATCCGTGT+TGG + chr5.3:18327695-18327714 MS.gene78949:intron 35.0%
AATCTGAGGAGGTTAGAAAT+GGG + chr5.3:18327377-18327396 MS.gene78949:CDS 35.0%
AGCAGAGAAAAGAAATCTGA+AGG + chr5.3:18331780-18331799 MS.gene78949:CDS 35.0%
AGCATTCCAATGTATAGCAT+GGG - chr5.3:18329256-18329275 None:intergenic 35.0%
AGCTTTCATGATACAAAGCA+GGG - chr5.3:18331651-18331670 None:intergenic 35.0%
ATCACTGTCATTATCCACTA+TGG - chr5.3:18331713-18331732 None:intergenic 35.0%
ATCAGTAGGAGAAGTTGAAA+AGG - chr5.3:18328902-18328921 None:intergenic 35.0%
ATGAGATAACAAGTCTGAAG+AGG - chr5.3:18330008-18330027 None:intergenic 35.0%
ATGCATTGAAACACACTCTT+AGG - chr5.3:18330250-18330269 None:intergenic 35.0%
CAAATCAACTTTGCGTCTAT+TGG + chr5.3:18329128-18329147 MS.gene78949:CDS 35.0%
CAACTAACACTGCATTCTTT+AGG + chr5.3:18331561-18331580 MS.gene78949:intron 35.0%
CTAAACACAAACAGAATCTC+TGG - chr5.3:18331886-18331905 None:intergenic 35.0%
CTTTGCAAAGAAGTTCTTCA+TGG - chr5.3:18329937-18329956 None:intergenic 35.0%
GAACAGCAAATGGAATTTGA+AGG + chr5.3:18328930-18328949 MS.gene78949:CDS 35.0%
GAATATGCATGTGATGTTGA+TGG + chr5.3:18328871-18328890 MS.gene78949:CDS 35.0%
GAGATATGCACTTCTTAACA+GGG + chr5.3:18329898-18329917 MS.gene78949:CDS 35.0%
GATGCTTATTCATTCAAGCT+TGG + chr5.3:18329961-18329980 MS.gene78949:CDS 35.0%
GCAAAAATAGAGAGCTAATG+TGG - chr5.3:18328119-18328138 None:intergenic 35.0%
TCACTGTCATTATCCACTAT+GGG - chr5.3:18331712-18331731 None:intergenic 35.0%
TCAGCAAATAAGGAACTTCT+TGG - chr5.3:18328179-18328198 None:intergenic 35.0%
TCATAACCTATCTCTTTCTC+CGG + chr5.3:18330776-18330795 MS.gene78949:intron 35.0%
TCTATTGGAAACGTCAATTC+CGG + chr5.3:18329143-18329162 MS.gene78949:CDS 35.0%
TCTCTATGCCCAAAAATGAA+GGG - chr5.3:18332288-18332307 None:intergenic 35.0%
TCTTCAAATTCCTCCTTTGT+TGG - chr5.3:18327634-18327653 None:intergenic 35.0%
TGAAACATCTTACAGGTAGA+AGG + chr5.3:18327340-18327359 MS.gene78949:intron 35.0%
TGAGATAACAAGTCTGAAGA+GGG - chr5.3:18330007-18330026 None:intergenic 35.0%
TGCTTTGTATCATGAAAGCT+CGG + chr5.3:18331651-18331670 MS.gene78949:CDS 35.0%
TGGAGGATCATTATTTGTAC+AGG + chr5.3:18329299-18329318 MS.gene78949:CDS 35.0%
TGGTCCATCAAAATATTAGG+TGG - chr5.3:18329611-18329630 None:intergenic 35.0%
TGTTAGAAGGAAGTTATAGC+TGG - chr5.3:18330402-18330421 None:intergenic 35.0%
TGTTTGTGTTTAGCGATTCT+TGG + chr5.3:18331893-18331912 MS.gene78949:intron 35.0%
TTACATTGGGCTGTATTTCA+GGG + chr5.3:18329220-18329239 MS.gene78949:intron 35.0%
TTCACATTTCACGGTTAGAT+TGG - chr5.3:18327324-18327343 None:intergenic 35.0%
TTGCAAAGAAGTTCTTCATG+GGG - chr5.3:18329935-18329954 None:intergenic 35.0%
TTGGAATATACTCACATGCA+AGG - chr5.3:18327305-18327324 None:intergenic 35.0%
! AAACTCCTTTTCCAAGTAAG+TGG - chr5.3:18328815-18328834 None:intergenic 35.0%
! ACCACTTCAATATGGCTTTT+GGG + chr5.3:18327804-18327823 MS.gene78949:intron 35.0%
! CAATAGACGCAAAGTTGATT+TGG - chr5.3:18329130-18329149 None:intergenic 35.0%
! CTTACTTGGAAAAGGAGTTT+TGG + chr5.3:18328815-18328834 MS.gene78949:CDS 35.0%
! TACCACTTCAATATGGCTTT+TGG + chr5.3:18327803-18327822 MS.gene78949:intron 35.0%
! TCACATTTTTCATGAGTGGA+AGG + chr5.3:18328629-18328648 MS.gene78949:CDS 35.0%
! TCATTTTCCAAAGAATCACC+GGG + chr5.3:18327117-18327136 MS.gene78949:CDS 35.0%
! TCGTAAAGTGTTTCTCAAGA+AGG + chr5.3:18328089-18328108 MS.gene78949:intron 35.0%
! TGCTGTTTAGTATGTTTGCA+TGG + chr5.3:18329272-18329291 MS.gene78949:CDS 35.0%
! TTCTGAAAGAGAACAAAGAG+TGG - chr5.3:18331416-18331435 None:intergenic 35.0%
! TTGATACAAGCGATTTGGAT+TGG + chr5.3:18327575-18327594 MS.gene78949:CDS 35.0%
! TTTGAACAGCCTTATAGACA+GGG - chr5.3:18329640-18329659 None:intergenic 35.0%
!! CTCTGAAACATATCTGACAA+AGG - chr5.3:18331211-18331230 None:intergenic 35.0%
!! GCTTTGTTTCAAAGTAGTTG+TGG + chr5.3:18327165-18327184 MS.gene78949:CDS 35.0%
!! TGAATTTTGCACTTGGTGAT+TGG + chr5.3:18329849-18329868 MS.gene78949:CDS 35.0%
!! TTTTGAACAGCCTTATAGAC+AGG - chr5.3:18329641-18329660 None:intergenic 35.0%
!!! ATCCAGATGTGTTTTTCAAG+CGG + chr5.3:18327539-18327558 MS.gene78949:CDS 35.0%
!!! TCTTTTCTCTGCTTTAAGAG+AGG - chr5.3:18331773-18331792 None:intergenic 35.0%
AAAACTTGGTATGGTATCCC+TGG + chr5.3:18329467-18329486 MS.gene78949:CDS 40.0%
AAATCTCTTGACCTCATCTG+TGG + chr5.3:18331052-18331071 MS.gene78949:CDS 40.0%
AACAGATTTGCAAGGGGAAA+TGG + chr5.3:18332112-18332131 MS.gene78949:CDS 40.0%
AACATCTTACAGGTAGAAGG+AGG + chr5.3:18327343-18327362 MS.gene78949:intron 40.0%
AACGACAAAGTAATTGGCCA+CGG - chr5.3:18330615-18330634 None:intergenic 40.0%
AACGTGATGAATAGAAGTGG+AGG + chr5.3:18327469-18327488 MS.gene78949:CDS 40.0%
AAGATGTTTGAGCAGGAAGA+TGG + chr5.3:18331130-18331149 MS.gene78949:CDS 40.0%
AAGGAACTTCTTGGAAAGGT+CGG - chr5.3:18328170-18328189 None:intergenic 40.0%
AAGGTTATTACAAACTCCCC+TGG - chr5.3:18329665-18329684 None:intergenic 40.0%
AATCATGCAAAACATTGCCC+CGG - chr5.3:18327138-18327157 None:intergenic 40.0%
AATCTCTTGACCTCATCTGT+GGG + chr5.3:18331053-18331072 MS.gene78949:CDS 40.0%
ACACACTCTTTATCTGAGAG+AGG + chr5.3:18331081-18331100 MS.gene78949:CDS 40.0%
ACAGAACCCATGCTATACAT+TGG + chr5.3:18329247-18329266 MS.gene78949:CDS 40.0%
ACCAAAACTAACATACTGGG+AGG - chr5.3:18330555-18330574 None:intergenic 40.0%
ACCCAAAAGCCATATTGAAG+TGG - chr5.3:18327808-18327827 None:intergenic 40.0%
AGATGTTTGAGCAGGAAGAT+GGG + chr5.3:18331131-18331150 MS.gene78949:CDS 40.0%
AGCATTAACTATCAGCACTG+CGG + chr5.3:18329437-18329456 MS.gene78949:intron 40.0%
AGGTAGAGTAAGACAATCTG+AGG + chr5.3:18327363-18327382 MS.gene78949:CDS 40.0%
AGTGTTTCTTCTCATTCGCA+TGG + chr5.3:18330112-18330131 MS.gene78949:CDS 40.0%
ATAAGGCTGTTCAAAAGCCA+GGG + chr5.3:18329645-18329664 MS.gene78949:CDS 40.0%
ATCAGTGCAAACTACCAACA+CGG - chr5.3:18327712-18327731 None:intergenic 40.0%
CAATCTGAGGAGGTTAGAAA+TGG + chr5.3:18327376-18327395 MS.gene78949:CDS 40.0%
CAGCATTCCAATGTATAGCA+TGG - chr5.3:18329257-18329276 None:intergenic 40.0%
CATAACAGTCACGTTTGCAA+AGG - chr5.3:18330153-18330172 None:intergenic 40.0%
CATAACCTATCTCTTTCTCC+GGG + chr5.3:18330777-18330796 MS.gene78949:intron 40.0%
CATCTATCCTTTCCGTAAAG+AGG - chr5.3:18328413-18328432 None:intergenic 40.0%
CCAAAACTAACATACTGGGA+GGG - chr5.3:18330554-18330573 None:intergenic 40.0%
CCAACAAATAATCCAGAGTG+TGG + chr5.3:18331310-18331329 MS.gene78949:CDS 40.0%
CCACACTCTGGATTATTTGT+TGG - chr5.3:18331313-18331332 None:intergenic 40.0%
CCATAAAGTCCCTGTCTATA+AGG + chr5.3:18329628-18329647 MS.gene78949:CDS 40.0%
CCTTATAGACAGGGACTTTA+TGG - chr5.3:18329631-18329650 None:intergenic 40.0%
CTCGAAGAACAGATTTGCAA+GGG + chr5.3:18332105-18332124 MS.gene78949:CDS 40.0%
CTCTCTATGCCCAAAAATGA+AGG - chr5.3:18332289-18332308 None:intergenic 40.0%
CTGGTTGTAAACTTGAATCC+AGG - chr5.3:18328565-18328584 None:intergenic 40.0%
CTTACATTGGGCTGTATTTC+AGG + chr5.3:18329219-18329238 MS.gene78949:intron 40.0%
GACAGTGATGATTCTGATTC+AGG + chr5.3:18331724-18331743 MS.gene78949:CDS 40.0%
GAGAGAGGATATTACGGATA+TGG + chr5.3:18331096-18331115 MS.gene78949:CDS 40.0%
GAGCTTTCATGATACAAAGC+AGG - chr5.3:18331652-18331671 None:intergenic 40.0%
GCTAACGTGATGAATAGAAG+TGG + chr5.3:18327466-18327485 MS.gene78949:CDS 40.0%
GCTCCAGAAGCTTCTAAATA+TGG + chr5.3:18327679-18327698 MS.gene78949:CDS 40.0%
GCTTTCATGATACAAAGCAG+GGG - chr5.3:18331650-18331669 None:intergenic 40.0%
GGAGATATGCACTTCTTAAC+AGG + chr5.3:18329897-18329916 MS.gene78949:CDS 40.0%
GGAGGAATTTGAAGATCCTT+TGG + chr5.3:18327639-18327658 MS.gene78949:CDS 40.0%
GTGCATATGTTAATGCCACA+GGG - chr5.3:18327760-18327779 None:intergenic 40.0%
TAATACCCGGAGAAAGAGAT+AGG - chr5.3:18330785-18330804 None:intergenic 40.0%
TAGAGTAAGACAATCTGAGG+AGG + chr5.3:18327366-18327385 MS.gene78949:CDS 40.0%
TAGTATGTTTGCATGGCATG+TGG + chr5.3:18329279-18329298 MS.gene78949:CDS 40.0%
TATAAGGCTGTTCAAAAGCC+AGG + chr5.3:18329644-18329663 MS.gene78949:CDS 40.0%
TCCTGTGTATTCTCCAACAA+AGG + chr5.3:18327618-18327637 MS.gene78949:CDS 40.0%
TCCTTTGTTGGAGAATACAC+AGG - chr5.3:18327622-18327641 None:intergenic 40.0%
TCGAAGAACAGATTTGCAAG+GGG + chr5.3:18332106-18332125 MS.gene78949:CDS 40.0%
TCTCTGGCAGATATACATGA+TGG - chr5.3:18331870-18331889 None:intergenic 40.0%
TGTGTATTCTCCAACAAAGG+AGG + chr5.3:18327621-18327640 MS.gene78949:CDS 40.0%
TTCAAAACATTCTGAGCAGC+AGG + chr5.3:18331810-18331829 MS.gene78949:CDS 40.0%
TTCATTAAAACAACCCCAGC+AGG - chr5.3:18328535-18328554 None:intergenic 40.0%
TTCCGCTTGAAAAACACATC+TGG - chr5.3:18327544-18327563 None:intergenic 40.0%
TTGAAGAAAGTCCTTCCTGA+AGG + chr5.3:18331992-18332011 MS.gene78949:CDS 40.0%
TTTCAGAGAGCTGAAGCAAA+TGG + chr5.3:18331223-18331242 MS.gene78949:CDS 40.0%
TTTGCTGAAACCTCTCTCTT+CGG - chr5.3:18332210-18332229 None:intergenic 40.0%
! CATTTTCCAAAGAATCACCG+GGG + chr5.3:18327118-18327137 MS.gene78949:CDS 40.0%
! CTGTTTAAAACCTCATGCAG+TGG - chr5.3:18331529-18331548 None:intergenic 40.0%
! GAAGCAGTGAATTTTGCACT+TGG + chr5.3:18329842-18329861 MS.gene78949:CDS 40.0%
! TTGTCAAGTGATGGAGAAGA+TGG + chr5.3:18329548-18329567 MS.gene78949:CDS 40.0%
!! AAGGAGTTTTGGCAGGAAAT+TGG + chr5.3:18328826-18328845 MS.gene78949:CDS 40.0%
!! ACGCAGCTTTGGAATTTGAA+AGG + chr5.3:18329492-18329511 MS.gene78949:CDS 40.0%
!! ACTTACATTTTTGGGAGCAG+AGG - chr5.3:18331452-18331471 None:intergenic 40.0%
!! AGCTTTGGAATTTGAAAGGG+TGG + chr5.3:18329496-18329515 MS.gene78949:CDS 40.0%
!! CAAAGTTGATTTGGGTAACC+GGG - chr5.3:18329121-18329140 None:intergenic 40.0%
!! CGCAGCTTTGGAATTTGAAA+GGG + chr5.3:18329493-18329512 MS.gene78949:CDS 40.0%
!! GCAAAGTTGATTTGGGTAAC+CGG - chr5.3:18329122-18329141 None:intergenic 40.0%
!! GGCTTTTGGGTGTGTTTTTA+GGG + chr5.3:18327817-18327836 MS.gene78949:intron 40.0%
!! GTTTTAATGAAGGAGCAACC+TGG + chr5.3:18328544-18328563 MS.gene78949:CDS 40.0%
!! TCTCTGCTTTAAGAGAGGAA+GGG - chr5.3:18331768-18331787 None:intergenic 40.0%
!! TGGCTTTTGGGTGTGTTTTT+AGG + chr5.3:18327816-18327835 MS.gene78949:intron 40.0%
!! TTCTCTGCTTTAAGAGAGGA+AGG - chr5.3:18331769-18331788 None:intergenic 40.0%
!! TTGGTGATTGGTTTCCTCTT+GGG + chr5.3:18329861-18329880 MS.gene78949:CDS 40.0%
!!! AGATGTGTTTTTCAAGCGGA+AGG + chr5.3:18327543-18327562 MS.gene78949:CDS 40.0%
!!! TGCTGGGGTTGTTTTAATGA+AGG + chr5.3:18328534-18328553 MS.gene78949:CDS 40.0%
AAGAGTGGATGCAGCAGAAA+AGG - chr5.3:18331401-18331420 None:intergenic 45.0%
AAGCGCCTTCCATTGAGATT+GGG + chr5.3:18332239-18332258 MS.gene78949:CDS 45.0%
ACACTGCATTCTTTAGGCTG+AGG + chr5.3:18331567-18331586 MS.gene78949:intron 45.0%
ACCATGTCCTCTTTACGGAA+AGG + chr5.3:18328403-18328422 MS.gene78949:intron 45.0%
ACGACAAAGTAATTGGCCAC+GGG - chr5.3:18330614-18330633 None:intergenic 45.0%
ACTGCATTCTTTAGGCTGAG+GGG + chr5.3:18331569-18331588 MS.gene78949:intron 45.0%
ACTTCTCCTACTGATCAGCT+TGG + chr5.3:18328907-18328926 MS.gene78949:CDS 45.0%
AGAAGATTCGCATGCACTGT+TGG - chr5.3:18331623-18331642 None:intergenic 45.0%
AGTTCTTCATGGGGCAGTAA+AGG - chr5.3:18329926-18329945 None:intergenic 45.0%
ATCAGCTTGGGAACAGCAAA+TGG + chr5.3:18328920-18328939 MS.gene78949:CDS 45.0%
CACTGCATTCTTTAGGCTGA+GGG + chr5.3:18331568-18331587 MS.gene78949:intron 45.0%
CCTCGAAGAACAGATTTGCA+AGG + chr5.3:18332104-18332123 MS.gene78949:CDS 45.0%
CCTTGCAAATCTGTTCTTCG+AGG - chr5.3:18332107-18332126 None:intergenic 45.0%
CGTGCATATGTTAATGCCAC+AGG - chr5.3:18327761-18327780 None:intergenic 45.0%
CTTCAGTATCCCATTCAGCA+AGG - chr5.3:18328603-18328622 None:intergenic 45.0%
CTTCTCCTACTGATCAGCTT+GGG + chr5.3:18328908-18328927 MS.gene78949:CDS 45.0%
GAGGGGAATTGTGAAGAACT+TGG + chr5.3:18331586-18331605 MS.gene78949:CDS 45.0%
GGAAATTGGTCGTGGGAAAA+TGG + chr5.3:18328840-18328859 MS.gene78949:CDS 45.0%
GGAGAATACACAGGACATTC+TGG - chr5.3:18327613-18327632 None:intergenic 45.0%
GTAACCAACTAGCACAATGC+TGG - chr5.3:18330069-18330088 None:intergenic 45.0%
GTTTCCAGCATTGTGCTAGT+TGG + chr5.3:18330062-18330081 MS.gene78949:CDS 45.0%
TAAGGCTGTTCAAAAGCCAG+GGG + chr5.3:18329646-18329665 MS.gene78949:CDS 45.0%
TATGTTTGCATGGCATGTGG+AGG + chr5.3:18329282-18329301 MS.gene78949:CDS 45.0%
TCCTTTCCGTAAAGAGGACA+TGG - chr5.3:18328407-18328426 None:intergenic 45.0%
TGAGCAGGAAGATGGGATAT+TGG + chr5.3:18331138-18331157 MS.gene78949:CDS 45.0%
TGATTCTGTGTACCACACTC+TGG - chr5.3:18331325-18331344 None:intergenic 45.0%
TGCAGCAAAGATGTTTGAGC+AGG + chr5.3:18331123-18331142 MS.gene78949:CDS 45.0%
TTACCATGGCGTAAGCATAC+AGG - chr5.3:18330208-18330227 None:intergenic 45.0%
TTCCTGAAGGAAAAAGCAGC+AGG + chr5.3:18332005-18332024 MS.gene78949:CDS 45.0%
TTGAGAGGTTCACCTTCTTG+TGG + chr5.3:18327499-18327518 MS.gene78949:CDS 45.0%
TTTCCCCAAGAGAACGTCAA+AGG - chr5.3:18329576-18329595 None:intergenic 45.0%
TTTGGCAGGAAATTGGTCGT+GGG + chr5.3:18328833-18328852 MS.gene78949:CDS 45.0%
TTTGGCCCAATCTCAATGGA+AGG - chr5.3:18332247-18332266 None:intergenic 45.0%
! ATGTCTTCCTGCCACTTACT+TGG + chr5.3:18328801-18328820 MS.gene78949:CDS 45.0%
! GGAGCGTCAAAAACTTGGTA+TGG + chr5.3:18329458-18329477 MS.gene78949:CDS 45.0%
! GGATTATTTGTTGGCAGTCC+TGG - chr5.3:18331304-18331323 None:intergenic 45.0%
! TCCTGCCACTTACTTGGAAA+AGG + chr5.3:18328807-18328826 MS.gene78949:CDS 45.0%
! TCCTTTTCCAAGTAAGTGGC+AGG - chr5.3:18328811-18328830 None:intergenic 45.0%
! TTTTGGCAGGAAATTGGTCG+TGG + chr5.3:18328832-18328851 MS.gene78949:CDS 45.0%
!! ATGGTCTTTGATGGCGTTTC+CGG + chr5.3:18328209-18328228 MS.gene78949:intron 45.0%
!! CCCTCCCAGTATGTTAGTTT+TGG + chr5.3:18330551-18330570 MS.gene78949:intron 45.0%
!! CTTGGAAAAGGAGTTTTGGC+AGG + chr5.3:18328819-18328838 MS.gene78949:CDS 45.0%
!! CTTGGTGATTGGTTTCCTCT+TGG + chr5.3:18329860-18329879 MS.gene78949:CDS 45.0%
!! TGGTGATTGGTTTCCTCTTG+GGG + chr5.3:18329862-18329881 MS.gene78949:CDS 45.0%
!!! TGCTGCTTTTTCCTTCAGGA+AGG - chr5.3:18332006-18332025 None:intergenic 45.0%
!!! TGTGTTTTTCAAGCGGAAGG+TGG + chr5.3:18327546-18327565 MS.gene78949:CDS 45.0%
AAAGTAATTGGCCACGGGGA+AGG - chr5.3:18330609-18330628 None:intergenic 50.0%
AACCATGACTGAAGCCTGCA+TGG - chr5.3:18329700-18329719 None:intergenic 50.0%
AAGATCACCACCGAAGAGAG+AGG + chr5.3:18332197-18332216 MS.gene78949:CDS 50.0%
AATTCCAAAGCTGCGTGACC+AGG - chr5.3:18329488-18329507 None:intergenic 50.0%
ACATTGCCCCGGTGATTCTT+TGG - chr5.3:18327127-18327146 None:intergenic 50.0%
ACCTGACATCAAGCCCATAG+TGG + chr5.3:18331696-18331715 MS.gene78949:CDS 50.0%
ACTTGTCTGAGTGGCAGCAA+TGG - chr5.3:18327443-18327462 None:intergenic 50.0%
ATTCCAAAGCTGCGTGACCA+GGG - chr5.3:18329487-18329506 None:intergenic 50.0%
CAGTATCCCATTCAGCAAGG+CGG - chr5.3:18328600-18328619 None:intergenic 50.0%
CATCATTGCTCCACTGCATG+AGG + chr5.3:18331516-18331535 MS.gene78949:intron 50.0%
CATCCTGTATGCTTACGCCA+TGG + chr5.3:18330202-18330221 MS.gene78949:CDS 50.0%
CGACAAAGTAATTGGCCACG+GGG - chr5.3:18330613-18330632 None:intergenic 50.0%
CTGTTCCCAAGCTGATCAGT+AGG - chr5.3:18328916-18328935 None:intergenic 50.0%
GAGCCTTTGACGTTCTCTTG+GGG + chr5.3:18329570-18329589 MS.gene78949:CDS 50.0%
GCACGAAGATATTGCAGTGC+TGG + chr5.3:18328778-18328797 MS.gene78949:CDS 50.0%
GCACTGAGCAAAGCTTACCA+TGG - chr5.3:18330222-18330241 None:intergenic 50.0%
GGAGCCTTTGACGTTCTCTT+GGG + chr5.3:18329569-18329588 MS.gene78949:CDS 50.0%
GTTAGCAGCACTTGTCTGAG+TGG - chr5.3:18327452-18327471 None:intergenic 50.0%
TACCATGCAGGCTTCAGTCA+TGG + chr5.3:18329695-18329714 MS.gene78949:CDS 50.0%
TCCACTATGGGCTTGATGTC+AGG - chr5.3:18331700-18331719 None:intergenic 50.0%
TCGCTTTGGCCCAATCTCAA+TGG - chr5.3:18332251-18332270 None:intergenic 50.0%
TCTTGTGGCACGAGATTGCA+TGG + chr5.3:18327514-18327533 MS.gene78949:CDS 50.0%
TGAGTGCTTCTGTACCTGCT+GGG + chr5.3:18328518-18328537 MS.gene78949:CDS 50.0%
TGCAATCTCGTGCCACAAGA+AGG - chr5.3:18327514-18327533 None:intergenic 50.0%
TGCCCAAAAATGAAGGGCCT+CGG - chr5.3:18332282-18332301 None:intergenic 50.0%
TGGAGCCTTTGACGTTCTCT+TGG + chr5.3:18329568-18329587 MS.gene78949:CDS 50.0%
TGTGTTTGCTCCCACAGATG+AGG - chr5.3:18331066-18331085 None:intergenic 50.0%
TTGAGTGCTTCTGTACCTGC+TGG + chr5.3:18328517-18328536 MS.gene78949:CDS 50.0%
! ACTGCGGAGCGTCAAAAACT+TGG + chr5.3:18329453-18329472 MS.gene78949:CDS 50.0%
! AGTCCGAGGCCCTTCATTTT+TGG + chr5.3:18332276-18332295 MS.gene78949:CDS 50.0%
! AGTGGAGGAGATGCTTTGAG+AGG + chr5.3:18327484-18327503 MS.gene78949:CDS 50.0%
! GAAGCGCCTTCCATTGAGAT+TGG + chr5.3:18332238-18332257 MS.gene78949:CDS 50.0%
! GATAATGGTAACCTTCCCCG+TGG + chr5.3:18330595-18330614 MS.gene78949:intron 50.0%
! GCTTTGCGTTGATATCGGTC+TGG + chr5.3:18327093-18327112 MS.gene78949:CDS 50.0%
!! GCAGGTACAGAAGCACTCAA+AGG - chr5.3:18328517-18328536 None:intergenic 50.0%
!! GTCCGAGGCCCTTCATTTTT+GGG + chr5.3:18332277-18332296 MS.gene78949:CDS 50.0%
!!! TGCCTGCTGCTTTTTCCTTC+AGG - chr5.3:18332010-18332029 None:intergenic 50.0%
AAGCCTGCATGGTACGCTCT+AGG - chr5.3:18329689-18329708 None:intergenic 55.0%
AGCCTGCATGGTACGCTCTA+GGG - chr5.3:18329688-18329707 None:intergenic 55.0%
CCAAAGCGACTCAAAGTCCG+AGG + chr5.3:18332262-18332281 MS.gene78949:CDS 55.0%
CCTCGGACTTTGAGTCGCTT+TGG - chr5.3:18332265-18332284 None:intergenic 55.0%
CTCTTGGGGCTATTGCAAGC+AGG + chr5.3:18329876-18329895 MS.gene78949:CDS 55.0%
CTGCTTGCAATAGCCCCAAG+AGG - chr5.3:18329878-18329897 None:intergenic 55.0%
GAGTGCTTCTGTACCTGCTG+GGG + chr5.3:18328519-18328538 MS.gene78949:CDS 55.0%
GCTGAAACCTCTCTCTTCGG+TGG - chr5.3:18332207-18332226 None:intergenic 55.0%
GGAGCAGAGGAACACTCATG+AGG - chr5.3:18331439-18331458 None:intergenic 55.0%
TATCCCTGGTCACGCAGCTT+TGG + chr5.3:18329481-18329500 MS.gene78949:CDS 55.0%
TTCCCTAGAGCGTACCATGC+AGG + chr5.3:18329683-18329702 MS.gene78949:CDS 55.0%
!! TGCATGGTACGCTCTAGGGA+AGG - chr5.3:18329684-18329703 None:intergenic 55.0%
AGCCTCTCCGCCTTGCTGAA+TGG + chr5.3:18328590-18328609 MS.gene78949:CDS 60.0%
GCCTCTCCGCCTTGCTGAAT+GGG + chr5.3:18328591-18328610 MS.gene78949:CDS 60.0%
TCCCATTCAGCAAGGCGGAG+AGG - chr5.3:18328595-18328614 None:intergenic 60.0%
AAGGCGGAGAGGCTGCACTC+TGG - chr5.3:18328584-18328603 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 18327091 18332324 18327091 ID=MS.gene78949
chr5.3 mRNA 18327091 18332324 18327091 ID=MS.gene78949.t1;Parent=MS.gene78949
chr5.3 exon 18327091 18327186 18327091 ID=MS.gene78949.t1.exon1;Parent=MS.gene78949.t1
chr5.3 CDS 18327091 18327186 18327091 ID=cds.MS.gene78949.t1;Parent=MS.gene78949.t1
chr5.3 exon 18327355 18327700 18327355 ID=MS.gene78949.t1.exon2;Parent=MS.gene78949.t1
chr5.3 CDS 18327355 18327700 18327355 ID=cds.MS.gene78949.t1;Parent=MS.gene78949.t1
chr5.3 exon 18328494 18328650 18328494 ID=MS.gene78949.t1.exon3;Parent=MS.gene78949.t1
chr5.3 CDS 18328494 18328650 18328494 ID=cds.MS.gene78949.t1;Parent=MS.gene78949.t1
chr5.3 exon 18328732 18328951 18328732 ID=MS.gene78949.t1.exon4;Parent=MS.gene78949.t1
chr5.3 CDS 18328732 18328951 18328732 ID=cds.MS.gene78949.t1;Parent=MS.gene78949.t1
chr5.3 exon 18329111 18329164 18329111 ID=MS.gene78949.t1.exon5;Parent=MS.gene78949.t1
chr5.3 CDS 18329111 18329164 18329111 ID=cds.MS.gene78949.t1;Parent=MS.gene78949.t1
chr5.3 exon 18329241 18329320 18329241 ID=MS.gene78949.t1.exon6;Parent=MS.gene78949.t1
chr5.3 CDS 18329241 18329320 18329241 ID=cds.MS.gene78949.t1;Parent=MS.gene78949.t1
chr5.3 exon 18329439 18329716 18329439 ID=MS.gene78949.t1.exon7;Parent=MS.gene78949.t1
chr5.3 CDS 18329439 18329716 18329439 ID=cds.MS.gene78949.t1;Parent=MS.gene78949.t1
chr5.3 exon 18329828 18330223 18329828 ID=MS.gene78949.t1.exon8;Parent=MS.gene78949.t1
chr5.3 CDS 18329828 18330223 18329828 ID=cds.MS.gene78949.t1;Parent=MS.gene78949.t1
chr5.3 exon 18331047 18331465 18331047 ID=MS.gene78949.t1.exon9;Parent=MS.gene78949.t1
chr5.3 CDS 18331047 18331465 18331047 ID=cds.MS.gene78949.t1;Parent=MS.gene78949.t1
chr5.3 exon 18331583 18331831 18331583 ID=MS.gene78949.t1.exon10;Parent=MS.gene78949.t1
chr5.3 CDS 18331583 18331831 18331583 ID=cds.MS.gene78949.t1;Parent=MS.gene78949.t1
chr5.3 exon 18331980 18332324 18331980 ID=MS.gene78949.t1.exon11;Parent=MS.gene78949.t1
chr5.3 CDS 18331980 18332324 18331980 ID=cds.MS.gene78949.t1;Parent=MS.gene78949.t1
Gene Sequence

>MS.gene78949

ATGCTTTGCGTTGATATCGGTCTGGTTCATTTTCCAAAGAATCACCGGGGCAATGTTTTGCATGATTTTTTGCAGCTTTGTTTCAAAGTAGTTGTGGTGCGACAAAATATATGTTTCAGTTTGTTCATTGTTGGTTATATATATCTATTAAGTTCTGAATTGTTGTAAACTTGTGATGTGATTTTGTTTTCTTGTTTGCCTTCAAAATTATCCTTGCATGTGAGTATATTCCAATCTAACCGTGAAATGTGAAACATCTTACAGGTAGAAGGAGGTAGAGTAAGACAATCTGAGGAGGTTAGAAATGGGTTAGAATTTTTGAAGCGTAAAAGGCTTCAGCGTGCACAAGCCATTGCTGCCACTCAGACAAGTGCTGCTAACGTGATGAATAGAAGTGGAGGAGATGCTTTGAGAGGTTCACCTTCTTGTGGCACGAGATTGCATGGTAATCCAGATGTGTTTTTCAAGCGGAAGGTGGATAAGTTTGATACAAGCGATTTGGATTGGACTGATAAAATTCCAGAATGTCCTGTGTATTCTCCAACAAAGGAGGAATTTGAAGATCCTTTGGTTTATTTGCAGAAGATAGCTCCAGAAGCTTCTAAATATGGTATGTATCCGTGTTGGTAGTTTGCACTGATGTTCTCATATTAGTTAATTAGTAAACCCTGTGGCATTAACATATGCACGCGTTTTGTCATTCTCATACTTTTACCACTTCAATATGGCTTTTGGGTGTGTTTTTAGGGTGTATTGATAGTTTGTAAACTCCCATATTCATCATTATCCATTATCCTTTGTTTGGATTAGTTTCCATCGTATAGTAGCTTCAATTAAAATAACTTCATAATAGAAACGTCTTCGCAAGAATTTCAATGTTTATGGAAAAGTAGAGAGAATTTCTGAATAAACTTGTTATTTGGAAGATTTTAATTTATACATGAAGCTGATTTTTGAAAAACTCAGTTATTGCAAGATTCTTTTAATATTTACTTGTTTCGTAAAGTGTTTCTCAAGAAGGTTATCCACATTAGCTCTCTATTTTTGCATTAGTTTAATTAGTTTTATTCAAGCAACCGACCTTTCCAAGAAGTTCCTTATTTGCTGATGTAATGATTATGGTCTTTGATGGCGTTTCCGGTTTCCTATATACAAATTGTAGTTGTGTGTCGTTTTTAAAATTAACGAGTGAACAGCCATTCATTTTCTATCGTGAAACTTCTCCTATTTGAAAAAACTCAAAACAAAATAATATGAAAACTCAATAGACTTACTAACAGGTATGGAGATTGTAGTAGTTAAATGTTAATTTACCATGTCCTCTTTACGGAAAGGATAGATGAAATCAGCAGAATGATAGAATTGTTACTGAACTTTTTTCATTTGAATTTTTGATATTCCAGGTATATGCAAGATTATTTCGCCTTTGAGTGCTTCTGTACCTGCTGGGGTTGTTTTAATGAAGGAGCAACCTGGATTCAAGTTTACAACCAGAGTGCAGCCTCTCCGCCTTGCTGAATGGGATACTGAAGACAAAGTCACATTTTTCATGAGTGGAAGGTCAGTTCTCTATTCTGTAAATATTTGCAATTTCAATTACATTATATTACATTTCTGATTGAACAATTGTAATTCACTCAGAAATTATACATTCCGTGAATATGAGAAAATGGCAAACAAGGTTTTTGCACGAAGATATTGCAGTGCTGGATGTCTTCCTGCCACTTACTTGGAAAAGGAGTTTTGGCAGGAAATTGGTCGTGGGAAAATGGATACTGTTGAATATGCATGTGATGTTGATGGCAGTGCCTTTTCAACTTCTCCTACTGATCAGCTTGGGAACAGCAAATGGAATTTGAAGGTGTTGCCTTTACTAGTGTCTCTTTTATATTCTTAGTTATCTTTGTTACCCCGTTATTTATTTATCATATTGGACAAAGCATTTTAACAAAATGACGGTTCTTGCGTTTTCTTTGCCATGTTAATAAACTTATCGAATACTTGCTCTTTATTATTTCAGAAACTTTCCCGGTTACCCAAATCAACTTTGCGTCTATTGGAAACGTCAATTCCGGTATGACAATTTCTTATGTCTGTCAATGTCATTTATGTACTATTCTTTTTGTGTCTTACATTGGGCTGTATTTCAGGGAGTAACAGAACCCATGCTATACATTGGAATGCTGTTTAGTATGTTTGCATGGCATGTGGAGGATCATTATTTGTACAGGTAAAATAAACTTCACTAGTTATACTAATAAATAGTAATGTTTTATCACAAGCAAATAATTCCTTCTTAAGTTGCATATTTAATGACATTGATATTATTATTTATATGGTAATGGCAGCATTAACTATCAGCACTGCGGAGCGTCAAAAACTTGGTATGGTATCCCTGGTCACGCAGCTTTGGAATTTGAAAGGGTGGTGAGAGAACATGTGTATTCTACTGATATTTTGTCAAGTGATGGAGAAGATGGAGCCTTTGACGTTCTCTTGGGGAAAACAACTTTATTTCCACCTAATATTTTGATGGACCATAAAGTCCCTGTCTATAAGGCTGTTCAAAAGCCAGGGGAGTTTGTAATAACCTTCCCTAGAGCGTACCATGCAGGCTTCAGTCATGGTTAGATTTGCTCTTTTCAATTGTTTTGTTATAGTAATTACATCTTTTCCCGATACTACACATTAAATGCATGTGAAATATTAATGTTGCGTATCTTCAATAAAATTCTAGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCACTTGGTGATTGGTTTCCTCTTGGGGCTATTGCAAGCAGGAGATATGCACTTCTTAACAGGGTTCCTTTACTGCCCCATGAAGAACTTCTTTGCAAAGAAGCGATGCTTATTCATTCAAGCTTGGAGCTTGAAGATTCAGACTTTCCCTCTTCAGACTTGTTATCTCATCATAGAACAAAGATAGCTTTCATTAATTTGTTGCGTTTCCAGCATTGTGCTAGTTGGTTACTAATGAAATCAAGGGCGTGTATTAGTGTTTCTTCTCATTCGCATGGCACAATTCTCTGTAGCCTTTGCAAACGTGACTGTTATGTAGCTTATGTTGACTGCAGCTGTCACATGCATCCTGTATGCTTACGCCATGGTAAGCTTTGCTCAGTGCTATTTCCTAAGAGTGTGTTTCAATGCATGCAAAATTATTTTTGGAAGCTTGGGAATATAATATTATTTTGTTTGGTAAAAGTTGTTATAAAATAATCATGGATATTATTGGTTTCTGGAATTCTAAATCATATGGTACTGATTTAAAAAAAATTCAACCAGCTATAACTTCCTTCTAACATAGTTTTTCAATGTTTCTATTTTTTTCTTTTTAAATAAATAAACTTCGAAACATTCCCAGCAAATATATTAAATCCTCAGCAAATATGAATTTTAATTATATTTGAGGTTATGTTTGTGATAATAGTAACCCTCCCAGTATGTTAGTTTTGGTATGTAGATATATTAATTTGTGATAATGGTAACCTTCCCCGTGGCCAATTACTTTGTCGTTATCTTATTGCATAATACTCCATTCATTTTTAGTTGTCATTTTAAGGTTATTTACATACCCCCATACCTATGAAAACTAATAATTTTTGTTACATTTGATGACATTATTTGAGTTTGTCCGACCCTTGACATTATTTTTATCTCATAACCTATCTCTTTCTCCGGGTATTATTGACAAAACAATAATCAATTTTGCATTGAACTTTGAAACTGAAAAGCAAATAGGATCACATTATTTTTACAAAAGCAACAAGTAAAAAGGAAGAAAGGGTGTAGAAAGTAAAGCATTATCTAAATTCTAGACCATGGGATAAATTTGTGACAAACAATGAATTTTCAAGTTAAATATCTTACATGTGTGTTAGATGATACAATATTCTCGCTTCTAATATCTTTATATATCATTATTTCAGATGTTAAATCTCTTGACCTCATCTGTGGGAGCAAACACACTCTTTATCTGAGAGAGGATATTACGGATATGGAAGCTGCAGCAAAGATGTTTGAGCAGGAAGATGGGATATTGGATGAGATAAGCAAGCAATCCAAAAGTGACCAAAATATGTATTCATATCCTTTGTCAGATATGTTTCAGAGAGCTGAAGCAAATGGATATGAACCTTATTGTGAGCTTAAACTTGATTCTATGATTGAATTTTATACAACTCCAGGACTGCCAACAAATAATCCAGAGTGTGGTACACAGAATCAATTTGTTTTGGGGAATTGCTCAGAAATTCCTAAACCAGAAGTGTCTGACGTTTCCTTTTCTGCTGCATCCACTCTTTGTTCTCTTTCAGAACCTCATGAGTGTTCCTCTGCTCCCAAAAATGTAAGTGTTTTGAATTTGAATATTAATATCTTGTTTGAATATTGGCAATTCATCATTGCTCCACTGCATGAGGTTTTAAACAGCTATTGTTAAGTCAACTAACACTGCATTCTTTAGGCTGAGGGGAATTGTGAAGAACTTGGTGAAACAATATCCAACAGTGCATGCGAATCTTCTCTATCCCCTGCTTTGTATCATGAAAGCTCGGCTAAACTGCATGATCTACAGAAACCTGACATCAAGCCCATAGTGGATAATGACAGTGATGATTCTGATTCAGGAATATTTAGGGTAAAGCGCCCTTCCTCTCTTAAAGCAGAGAAAAGAAATCTGAAGGTTATGGCTTCAAAACATTCTGAGCAGCAGGTTTGTAAAACAGTCTCATCGATGATTTAATTAGTCCATCATGTATATCTGCCAGAGATTCTGTTTGTGTTTAGCGATTCTTGGCACACATTTCCAACATTCTCTATCTTACATAAATTGACTATCTAATTTTGATCTATATGAACAGGGACTTAAACGATTGAAGAAAGTCCTTCCTGAAGGAAAAAGCAGCAGGCAACAAATGAATTTCAGAACCAGTGAATCAAGTGATAAATATAACCCTGTTAATCATAAAGTTGATATTGAGATTTCCTCGAAGAACAGATTTGCAAGGGGAAATGGCACTCCCATTTCAGCAAGATATAAAAAGTCAGGCAATGAGGAAGTAAGTATGCATATGCAACAAGATCACCACCGAAGAGAGAGGTTTCAGCAAACTTATAGAGAAGCGCCTTCCATTGAGATTGGGCCAAAGCGACTCAAAGTCCGAGGCCCTTCATTTTTGGGCATAGAGAGCAGCAGATTGAATTGA
Protein sequence

>MS.gene78949.t1

MLCVDIGLVHFPKNHRGNVLHDFLQLCFKVVVVEGGRVRQSEEVRNGLEFLKRKRLQRAQAIAATQTSAANVMNRSGGDALRGSPSCGTRLHGNPDVFFKRKVDKFDTSDLDWTDKIPECPVYSPTKEEFEDPLVYLQKIAPEASKYGICKIISPLSASVPAGVVLMKEQPGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFREYEKMANKVFARRYCSAGCLPATYLEKEFWQEIGRGKMDTVEYACDVDGSAFSTSPTDQLGNSKWNLKKLSRLPKSTLRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGHAALEFERVVREHVYSTDILSSDGEDGAFDVLLGKTTLFPPNILMDHKVPVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFALGDWFPLGAIASRRYALLNRVPLLPHEELLCKEAMLIHSSLELEDSDFPSSDLLSHHRTKIAFINLLRFQHCASWLLMKSRACISVSSHSHGTILCSLCKRDCYVAYVDCSCHMHPVCLRHDVKSLDLICGSKHTLYLREDITDMEAAAKMFEQEDGILDEISKQSKSDQNMYSYPLSDMFQRAEANGYEPYCELKLDSMIEFYTTPGLPTNNPECGTQNQFVLGNCSEIPKPEVSDVSFSAASTLCSLSEPHECSSAPKNAEGNCEELGETISNSACESSLSPALYHESSAKLHDLQKPDIKPIVDNDSDDSDSGIFRVKRPSSLKAEKRNLKVMASKHSEQQGLKRLKKVLPEGKSSRQQMNFRTSESSDKYNPVNHKVDIEISSKNRFARGNGTPISARYKKSGNEEVSMHMQQDHHRRERFQQTYREAPSIEIGPKRLKVRGPSFLGIESSRLN