Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79118.t1 | XP_024632961.1 | 85 | 793 | 91 | 4 | 1 | 765 | 1 | 793 | 0.00E+00 | 1344.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79118.t1 | Q9SZL8 | 26.9 | 636 | 395 | 11 | 32 | 665 | 70 | 637 | 3.6e-63 | 244.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79118.t1 | D3YBB9 | 77.0 | 774 | 158 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1192.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene79118.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79118.t1 | MTR_0558s0020 | 87.500 | 296 | 36 | 1 | 1 | 295 | 1 | 296 | 0.0 | 548 |
MS.gene79118.t1 | MTR_1g083640 | 83.099 | 284 | 32 | 1 | 1 | 268 | 1 | 284 | 1.40e-172 | 497 |
MS.gene79118.t1 | MTR_8g446020 | 73.898 | 295 | 38 | 1 | 1 | 295 | 1 | 256 | 7.93e-153 | 446 |
MS.gene79118.t1 | MTR_6g090505 | 69.000 | 300 | 68 | 2 | 65 | 364 | 1 | 275 | 9.04e-143 | 424 |
MS.gene79118.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 396 | 495 | 230 | 306 | 3.08e-34 | 135 |
MS.gene79118.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 567 | 615 | 314 | 362 | 9.07e-12 | 67.8 |
MS.gene79118.t1 | MTR_2g014100 | 82.041 | 245 | 35 | 1 | 1 | 236 | 1 | 245 | 9.49e-142 | 417 |
MS.gene79118.t1 | MTR_0337s0040 | 72.308 | 260 | 32 | 2 | 1 | 259 | 1 | 221 | 2.21e-124 | 371 |
MS.gene79118.t1 | MTR_3g008240 | 84.236 | 203 | 31 | 1 | 1 | 202 | 1 | 203 | 3.51e-118 | 354 |
MS.gene79118.t1 | MTR_4g040430 | 83.663 | 202 | 29 | 1 | 1 | 202 | 1 | 198 | 1.43e-117 | 352 |
MS.gene79118.t1 | MTR_0337s0060 | 59.494 | 316 | 28 | 4 | 447 | 759 | 21 | 239 | 2.17e-110 | 335 |
MS.gene79118.t1 | MTR_5g071590 | 73.333 | 180 | 35 | 2 | 1 | 167 | 1 | 180 | 1.84e-89 | 279 |
MS.gene79118.t1 | MTR_1g055240 | 88.028 | 142 | 17 | 0 | 91 | 232 | 3 | 144 | 3.46e-87 | 272 |
MS.gene79118.t1 | MTR_0019s0290 | 82.237 | 152 | 27 | 0 | 82 | 233 | 9 | 160 | 2.02e-86 | 270 |
MS.gene79118.t1 | MTR_3g028680 | 81.457 | 151 | 25 | 1 | 618 | 765 | 1 | 151 | 1.04e-80 | 256 |
MS.gene79118.t1 | MTR_2g067090 | 78.378 | 148 | 29 | 1 | 621 | 765 | 99 | 246 | 1.28e-71 | 236 |
MS.gene79118.t1 | MTR_4g133495 | 63.536 | 181 | 40 | 2 | 576 | 753 | 88 | 245 | 7.41e-68 | 225 |
MS.gene79118.t1 | MTR_4g133340 | 63.536 | 181 | 40 | 2 | 576 | 753 | 88 | 245 | 7.41e-68 | 225 |
MS.gene79118.t1 | MTR_1281s0010 | 80.734 | 109 | 21 | 0 | 19 | 127 | 1 | 109 | 2.19e-56 | 188 |
MS.gene79118.t1 | MTR_6g051425 | 32.075 | 318 | 185 | 6 | 40 | 341 | 22 | 324 | 1.36e-38 | 147 |
MS.gene79118.t1 | MTR_4g008820 | 70.000 | 100 | 29 | 1 | 1 | 99 | 125 | 224 | 1.46e-31 | 131 |
MS.gene79118.t1 | MTR_8g046060 | 77.273 | 88 | 11 | 2 | 1 | 79 | 91 | 178 | 3.63e-31 | 122 |
MS.gene79118.t1 | MTR_1g070355 | 26.543 | 324 | 217 | 6 | 41 | 362 | 80 | 384 | 4.54e-19 | 92.0 |
MS.gene79118.t1 | MTR_2g067130 | 62.162 | 74 | 22 | 2 | 695 | 765 | 46 | 116 | 2.33e-18 | 83.2 |
MS.gene79118.t1 | MTR_0402s0040 | 25.405 | 185 | 119 | 4 | 49 | 233 | 40 | 205 | 1.75e-14 | 77.4 |
MS.gene79118.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.70e-13 | 66.6 |
MS.gene79118.t1 | MTR_4g035820 | 22.414 | 290 | 192 | 7 | 17 | 299 | 61 | 324 | 1.06e-12 | 72.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79118.t1 | AT4G38180 | 27.613 | 641 | 384 | 13 | 32 | 665 | 70 | 637 | 3.30e-70 | 246 |
MS.gene79118.t1 | AT4G15090 | 24.965 | 721 | 447 | 16 | 50 | 753 | 66 | 709 | 3.61e-61 | 221 |
MS.gene79118.t1 | AT4G15090 | 24.965 | 721 | 447 | 16 | 50 | 753 | 66 | 709 | 3.61e-61 | 221 |
MS.gene79118.t1 | AT4G15090 | 24.965 | 721 | 447 | 16 | 50 | 753 | 66 | 709 | 3.61e-61 | 221 |
MS.gene79118.t1 | AT4G15090 | 24.965 | 721 | 447 | 16 | 50 | 753 | 66 | 709 | 3.61e-61 | 221 |
MS.gene79118.t1 | AT4G15090 | 24.965 | 721 | 447 | 16 | 50 | 753 | 66 | 709 | 3.61e-61 | 221 |
MS.gene79118.t1 | AT2G27110 | 26.298 | 597 | 366 | 15 | 127 | 719 | 108 | 634 | 7.17e-54 | 200 |
MS.gene79118.t1 | AT2G27110 | 26.298 | 597 | 366 | 15 | 127 | 719 | 108 | 634 | 7.17e-54 | 200 |
MS.gene79118.t1 | AT2G27110 | 27.308 | 509 | 313 | 11 | 213 | 719 | 36 | 489 | 2.04e-53 | 197 |
MS.gene79118.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 8.81e-52 | 193 |
MS.gene79118.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 8.81e-52 | 193 |
MS.gene79118.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 8.81e-52 | 193 |
MS.gene79118.t1 | AT1G76320 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 5.82e-51 | 189 |
MS.gene79118.t1 | AT1G76320 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 1.57e-50 | 189 |
MS.gene79118.t1 | AT1G76320 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 1.75e-50 | 189 |
MS.gene79118.t1 | AT1G76320 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 1.75e-50 | 189 |
MS.gene79118.t1 | AT3G22170 | 22.999 | 687 | 421 | 17 | 34 | 708 | 69 | 659 | 1.53e-47 | 181 |
MS.gene79118.t1 | AT3G22170 | 22.999 | 687 | 421 | 17 | 34 | 708 | 69 | 659 | 1.53e-47 | 181 |
MS.gene79118.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 4.47e-46 | 177 |
MS.gene79118.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 4.47e-46 | 177 |
MS.gene79118.t1 | AT4G38170 | 25.522 | 431 | 263 | 11 | 235 | 662 | 24 | 399 | 1.15e-44 | 169 |
MS.gene79118.t1 | AT1G10240 | 24.880 | 623 | 376 | 19 | 49 | 659 | 62 | 604 | 1.03e-42 | 166 |
MS.gene79118.t1 | AT1G10240 | 24.880 | 623 | 376 | 19 | 49 | 659 | 62 | 604 | 1.03e-42 | 166 |
MS.gene79118.t1 | AT2G32250 | 24.161 | 745 | 428 | 21 | 4 | 743 | 10 | 622 | 7.87e-41 | 160 |
MS.gene79118.t1 | AT5G28530 | 23.787 | 639 | 390 | 17 | 40 | 660 | 60 | 619 | 8.54e-41 | 160 |
MS.gene79118.t1 | AT2G32250 | 24.161 | 745 | 428 | 21 | 4 | 743 | 10 | 622 | 8.98e-41 | 161 |
MS.gene79118.t1 | AT2G32250 | 24.161 | 745 | 428 | 21 | 4 | 743 | 10 | 622 | 8.98e-41 | 161 |
MS.gene79118.t1 | AT2G32250 | 24.161 | 745 | 428 | 21 | 4 | 743 | 10 | 622 | 1.14e-40 | 160 |
MS.gene79118.t1 | AT2G32250 | 24.161 | 745 | 428 | 21 | 4 | 743 | 10 | 622 | 1.14e-40 | 160 |
MS.gene79118.t1 | AT2G32250 | 24.161 | 745 | 428 | 21 | 4 | 743 | 10 | 622 | 1.14e-40 | 160 |
MS.gene79118.t1 | AT5G28530 | 23.631 | 639 | 387 | 18 | 40 | 660 | 60 | 615 | 5.98e-40 | 157 |
MS.gene79118.t1 | AT5G28530 | 23.631 | 639 | 387 | 18 | 40 | 660 | 60 | 615 | 5.98e-40 | 157 |
MS.gene79118.t1 | AT2G32250 | 24.177 | 699 | 396 | 19 | 50 | 743 | 12 | 581 | 6.32e-40 | 158 |
MS.gene79118.t1 | AT2G32250 | 24.177 | 699 | 396 | 19 | 50 | 743 | 12 | 581 | 6.50e-40 | 158 |
MS.gene79118.t1 | AT1G80010 | 24.043 | 653 | 373 | 23 | 41 | 662 | 101 | 661 | 9.98e-38 | 151 |
MS.gene79118.t1 | AT1G52520 | 22.472 | 623 | 407 | 15 | 41 | 662 | 91 | 638 | 3.25e-34 | 140 |
MS.gene79118.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 106 | 369 | 1.52e-27 | 119 |
MS.gene79118.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 1.31e-12 | 72.0 |
MS.gene79118.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 1.73e-27 | 119 |
MS.gene79118.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.32e-12 | 72.0 |
MS.gene79118.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.05e-27 | 119 |
MS.gene79118.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.37e-12 | 72.0 |
MS.gene79118.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.05e-27 | 119 |
MS.gene79118.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.37e-12 | 72.0 |
MS.gene79118.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 177 | 440 | 2.21e-27 | 119 |
MS.gene79118.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 1.53e-12 | 71.6 |
MS.gene79118.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.29e-27 | 119 |
MS.gene79118.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.37e-12 | 72.0 |
MS.gene79118.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.29e-27 | 119 |
MS.gene79118.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 1.37e-12 | 72.0 |
MS.gene79118.t1 | AT5G28530 | 21.463 | 629 | 354 | 20 | 40 | 660 | 60 | 556 | 1.30e-21 | 100 |
MS.gene79118.t1 | AT5G28530 | 21.304 | 629 | 351 | 21 | 40 | 660 | 60 | 552 | 8.29e-21 | 97.8 |
Find 114 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 3.1:-68778324 | MS.gene79118:CDS |
TCATGCAGAGTTGGACTTTA+AGG | 0.162847 | 3.1:-68778015 | MS.gene79118:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 3.1:+68777189 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 3.1:-68778057 | MS.gene79118:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 3.1:-68779108 | MS.gene79118:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 3.1:-68778605 | MS.gene79118:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 3.1:-68778572 | MS.gene79118:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 3.1:+68778478 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 3.1:+68777195 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 3.1:-68778283 | MS.gene79118:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 3.1:-68777343 | MS.gene79118:CDS |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 3.1:+68779058 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 3.1:-68777760 | MS.gene79118:CDS |
ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 3.1:+68778460 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 3.1:-68778183 | MS.gene79118:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 3.1:-68777351 | MS.gene79118:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 3.1:-68779051 | MS.gene79118:intron |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 3.1:-68779059 | MS.gene79118:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 3.1:-68778184 | MS.gene79118:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 3.1:+68777467 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 3.1:+68779588 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 3.1:-68777203 | MS.gene79118:intron |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 3.1:+68777213 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 3.1:-68777883 | MS.gene79118:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 3.1:-68777318 | MS.gene79118:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 3.1:-68779817 | MS.gene79118:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 3.1:-68777635 | MS.gene79118:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 3.1:+68777712 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 3.1:-68779746 | MS.gene79118:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 3.1:-68777677 | MS.gene79118:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 3.1:+68777711 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 3.1:-68779411 | MS.gene79118:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 3.1:-68779529 | MS.gene79118:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 3.1:+68778467 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 3.1:-68779546 | MS.gene79118:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 3.1:+68777534 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 3.1:-68779663 | MS.gene79118:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 3.1:-68779381 | MS.gene79118:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 3.1:-68779892 | MS.gene79118:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 3.1:-68778393 | MS.gene79118:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 3.1:-68778229 | MS.gene79118:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 3.1:-68777634 | MS.gene79118:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 3.1:-68779697 | MS.gene79118:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 3.1:-68779336 | MS.gene79118:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 3.1:+68777881 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 3.1:+68779552 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 3.1:-68779759 | MS.gene79118:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 3.1:-68779268 | MS.gene79118:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 3.1:+68779441 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 3.1:-68779703 | MS.gene79118:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 3.1:-68777867 | MS.gene79118:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 3.1:+68778592 | None:intergenic |
CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 3.1:-68777242 | MS.gene79118:CDS |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 3.1:-68778282 | MS.gene79118:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 3.1:-68779255 | MS.gene79118:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 3.1:-68778043 | MS.gene79118:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 3.1:+68777963 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 3.1:-68779349 | MS.gene79118:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 3.1:+68779163 | None:intergenic |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 3.1:+68779453 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 3.1:-68778196 | MS.gene79118:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 3.1:-68777698 | MS.gene79118:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 3.1:+68779297 | None:intergenic |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 3.1:-68778178 | MS.gene79118:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 3.1:-68779493 | MS.gene79118:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 3.1:+68777718 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 3.1:+68778075 | None:intergenic |
GAGGGATAATCATGCAGAGT+TGG | 0.522874 | 3.1:-68778024 | MS.gene79118:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 3.1:-68777697 | MS.gene79118:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 3.1:+68777886 | None:intergenic |
ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 3.1:+68778447 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 3.1:-68779652 | MS.gene79118:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 3.1:+68778080 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 3.1:-68777866 | MS.gene79118:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 3.1:-68779651 | MS.gene79118:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 3.1:-68779827 | MS.gene79118:CDS |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 3.1:-68777477 | MS.gene79118:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 3.1:-68779201 | MS.gene79118:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 3.1:-68779868 | MS.gene79118:CDS |
GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 3.1:-68777243 | MS.gene79118:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 3.1:-68779333 | MS.gene79118:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 3.1:-68777391 | MS.gene79118:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 3.1:-68779494 | MS.gene79118:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 3.1:+68777962 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 3.1:+68777231 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 3.1:+68777941 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 3.1:-68779903 | MS.gene79118:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 3.1:-68779342 | MS.gene79118:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 3.1:-68777350 | MS.gene79118:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 3.1:-68777355 | MS.gene79118:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 3.1:-68777728 | MS.gene79118:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 3.1:+68777275 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 3.1:-68779262 | MS.gene79118:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 3.1:+68777443 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 3.1:-68779348 | MS.gene79118:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 3.1:-68779259 | MS.gene79118:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 3.1:-68777388 | MS.gene79118:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 3.1:-68777965 | MS.gene79118:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 3.1:-68777880 | MS.gene79118:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 3.1:+68779603 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 3.1:+68778227 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 3.1:-68779328 | MS.gene79118:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 3.1:+68777713 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 3.1:-68778392 | MS.gene79118:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 3.1:+68777470 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 3.1:-68778042 | MS.gene79118:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 3.1:+68777492 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 3.1:+68777921 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 3.1:-68777366 | MS.gene79118:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 3.1:+68777616 | None:intergenic |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 3.1:-68777633 | MS.gene79118:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 3.1:-68777782 | MS.gene79118:CDS |
TCAAACCATATACACAGACC+AGG | 0.683597 | 3.1:-68778465 | MS.gene79118:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 3.1:-68777781 | MS.gene79118:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTCTATAAGATATATAAG+TGG | - | chr3.1:68777505-68777524 | MS.gene79118:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | - | chr3.1:68777296-68777315 | MS.gene79118:CDS | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | - | chr3.1:68777506-68777525 | MS.gene79118:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | - | chr3.1:68777240-68777259 | MS.gene79118:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | - | chr3.1:68778123-68778142 | MS.gene79118:CDS | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr3.1:68778745-68778764 | MS.gene79118:intron | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | - | chr3.1:68778095-68778114 | MS.gene79118:CDS | 20.0% |
! | ACAAAATAAGAAATCGGATA+AGG | - | chr3.1:68777302-68777321 | MS.gene79118:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | - | chr3.1:68777940-68777959 | MS.gene79118:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | + | chr3.1:68777966-68777985 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | + | chr3.1:68779116-68779135 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | - | chr3.1:68777172-68777191 | MS.gene79118:intron | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr3.1:68778942-68778961 | MS.gene79118:intron | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | - | chr3.1:68777131-68777150 | MS.gene79118:intron | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | - | chr3.1:68778013-68778032 | MS.gene79118:CDS | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | + | chr3.1:68779081-68779100 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | - | chr3.1:68779116-68779135 | MS.gene79118:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | - | chr3.1:68778675-68778694 | MS.gene79118:intron | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | - | chr3.1:68778115-68778134 | MS.gene79118:CDS | 25.0% |
!! | TCAATTTCGAATGTTTTTCA+AGG | - | chr3.1:68778574-68778593 | MS.gene79118:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | - | chr3.1:68778371-68778390 | MS.gene79118:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | - | chr3.1:68779217-68779236 | MS.gene79118:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr3.1:68777292-68777311 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | - | chr3.1:68778122-68778141 | MS.gene79118:CDS | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr3.1:68777618-68777637 | MS.gene79118:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr3.1:68778749-68778768 | MS.gene79118:intron | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | - | chr3.1:68779218-68779237 | MS.gene79118:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | + | chr3.1:68778186-68778205 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | - | chr3.1:68777348-68777367 | MS.gene79118:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | - | chr3.1:68777948-68777967 | MS.gene79118:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | - | chr3.1:68779796-68779815 | MS.gene79118:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | - | chr3.1:68778716-68778735 | MS.gene79118:intron | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | - | chr3.1:68777651-68777670 | MS.gene79118:CDS | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | - | chr3.1:68777096-68777115 | MS.gene79118:intron | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | - | chr3.1:68778717-68778736 | MS.gene79118:intron | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | + | chr3.1:68778410-68778429 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | + | chr3.1:68779289-68779308 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | - | chr3.1:68777891-68777910 | MS.gene79118:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | + | chr3.1:68779121-68779140 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | - | chr3.1:68778052-68778071 | MS.gene79118:CDS | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | - | chr3.1:68779119-68779138 | MS.gene79118:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | - | chr3.1:68778631-68778650 | MS.gene79118:intron | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | + | chr3.1:68779290-68779309 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | + | chr3.1:68777944-68777963 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | - | chr3.1:68777437-68777456 | MS.gene79118:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | - | chr3.1:68777182-68777201 | MS.gene79118:intron | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | + | chr3.1:68778927-68778946 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | - | chr3.1:68777347-68777366 | MS.gene79118:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | + | chr3.1:68777819-68777838 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | + | chr3.1:68779061-68779080 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | + | chr3.1:68779807-68779826 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | + | chr3.1:68777705-68777724 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | - | chr3.1:68778330-68778349 | MS.gene79118:CDS | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | + | chr3.1:68777549-68777568 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | - | chr3.1:68777470-68777489 | MS.gene79118:CDS | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | - | chr3.1:68779176-68779195 | MS.gene79118:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | - | chr3.1:68777695-68777714 | MS.gene79118:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | - | chr3.1:68779633-68779652 | MS.gene79118:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr3.1:68778524-68778543 | None:intergenic | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | - | chr3.1:68779905-68779924 | MS.gene79118:CDS | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr3.1:68779789-68779808 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | - | chr3.1:68779401-68779420 | MS.gene79118:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | - | chr3.1:68779301-68779320 | MS.gene79118:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr3.1:68778027-68778046 | MS.gene79118:CDS | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr3.1:68779681-68779700 | MS.gene79118:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | - | chr3.1:68779302-68779321 | MS.gene79118:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | - | chr3.1:68779398-68779417 | MS.gene79118:CDS | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | - | chr3.1:68777853-68777872 | MS.gene79118:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | - | chr3.1:68777854-68777873 | MS.gene79118:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | - | chr3.1:68779466-68779485 | MS.gene79118:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr3.1:68778586-68778605 | MS.gene79118:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | - | chr3.1:68778956-68778975 | MS.gene79118:intron | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | - | chr3.1:68777253-68777272 | MS.gene79118:CDS | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | + | chr3.1:68778153-68778172 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | - | chr3.1:68778957-68778976 | MS.gene79118:intron | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | - | chr3.1:68777588-68777607 | MS.gene79118:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | + | chr3.1:68779291-68779310 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | - | chr3.1:68777336-68777355 | MS.gene79118:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | - | chr3.1:68777436-68777455 | MS.gene79118:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | - | chr3.1:68778803-68778822 | MS.gene79118:intron | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | - | chr3.1:68777431-68777450 | MS.gene79118:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | - | chr3.1:68779887-68779906 | MS.gene79118:CDS | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | - | chr3.1:68779862-68779881 | MS.gene79118:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | - | chr3.1:68777650-68777669 | MS.gene79118:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | - | chr3.1:68777373-68777392 | MS.gene79118:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | - | chr3.1:68777731-68777750 | MS.gene79118:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | + | chr3.1:68778162-68778181 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | + | chr3.1:68777414-68777433 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | - | chr3.1:68778427-68778446 | MS.gene79118:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | - | chr3.1:68779906-68779925 | MS.gene79118:CDS | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | - | chr3.1:68779239-68779258 | MS.gene79118:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr3.1:68778886-68778905 | MS.gene79118:intron | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | - | chr3.1:68778033-68778052 | MS.gene79118:CDS | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | - | chr3.1:68778759-68778778 | MS.gene79118:intron | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr3.1:68778599-68778618 | MS.gene79118:intron | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr3.1:68779735-68779754 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | + | chr3.1:68779468-68779487 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | - | chr3.1:68778816-68778835 | MS.gene79118:intron | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | - | chr3.1:68779408-68779427 | MS.gene79118:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | - | chr3.1:68778470-68778489 | MS.gene79118:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | - | chr3.1:68779469-68779488 | MS.gene79118:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | + | chr3.1:68778922-68778941 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | + | chr3.1:68778280-68778299 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | + | chr3.1:68779813-68779832 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | - | chr3.1:68777107-68777126 | MS.gene79118:intron | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | - | chr3.1:68779133-68779152 | MS.gene79118:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | - | chr3.1:68779365-68779384 | MS.gene79118:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | - | chr3.1:68778166-68778185 | MS.gene79118:CDS | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | - | chr3.1:68779644-68779663 | MS.gene79118:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | - | chr3.1:68779364-68779383 | MS.gene79118:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | - | chr3.1:68779522-68779541 | MS.gene79118:CDS | 40.0% | |
CTGTCTATGAACCATCTGTT+GGG | - | chr3.1:68779757-68779776 | MS.gene79118:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | + | chr3.1:68779510-68779529 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | + | chr3.1:68779535-68779554 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | - | chr3.1:68779132-68779151 | MS.gene79118:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | - | chr3.1:68778534-68778553 | MS.gene79118:CDS | 40.0% | |
TCATGCAGAGTTGGACTTTA+AGG | - | chr3.1:68778984-68779003 | MS.gene79118:intron | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | - | chr3.1:68778276-68778295 | MS.gene79118:CDS | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | + | chr3.1:68777865-68777884 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | + | chr3.1:68778535-68778554 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | - | chr3.1:68778394-68778413 | MS.gene79118:CDS | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | - | chr3.1:68779271-68779290 | MS.gene79118:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | + | chr3.1:68779559-68779578 | None:intergenic | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | + | chr3.1:68779532-68779551 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | + | chr3.1:68779875-68779894 | None:intergenic | 40.0% | |
! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr3.1:68779727-68779746 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | - | chr3.1:68779411-68779430 | MS.gene79118:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | - | chr3.1:68778815-68778834 | MS.gene79118:intron | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | + | chr3.1:68777387-68777406 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | - | chr3.1:68777657-68777676 | MS.gene79118:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | - | chr3.1:68777740-68777759 | MS.gene79118:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | - | chr3.1:68777798-68777817 | MS.gene79118:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | + | chr3.1:68777399-68777418 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | + | chr3.1:68778775-68778794 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | - | chr3.1:68779034-68779053 | MS.gene79118:intron | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | + | chr3.1:68779386-68779405 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | + | chr3.1:68777561-68777580 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | - | chr3.1:68777441-68777460 | MS.gene79118:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | - | chr3.1:68777737-68777756 | MS.gene79118:CDS | 45.0% | |
GAGGGATAATCATGCAGAGT+TGG | - | chr3.1:68778975-68778994 | MS.gene79118:intron | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | + | chr3.1:68779284-68779303 | None:intergenic | 45.0% | |
GCTGTCTATGAACCATCTGT+TGG | - | chr3.1:68779756-68779775 | MS.gene79118:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | - | chr3.1:68779366-68779385 | MS.gene79118:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | + | chr3.1:68777839-68777858 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | - | chr3.1:68779656-68779675 | MS.gene79118:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | + | chr3.1:68777450-68777469 | None:intergenic | 45.0% | |
! | ACTAGCCTGGTCTGTGTATA+TGG | + | chr3.1:68778542-68778561 | None:intergenic | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | - | chr3.1:68778838-68778857 | MS.gene79118:intron | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr3.1:68778821-68778840 | MS.gene79118:intron | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr3.1:68777453-68777472 | MS.gene79118:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | - | chr3.1:68777861-68777880 | MS.gene79118:CDS | 45.0% |
ACTTCAACAACGCACTAGCC+TGG | + | chr3.1:68778555-68778574 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | + | chr3.1:68779039-68779058 | None:intergenic | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | - | chr3.1:68778770-68778789 | MS.gene79118:intron | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | - | chr3.1:68779322-68779341 | MS.gene79118:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | - | chr3.1:68778607-68778626 | MS.gene79118:intron | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | - | chr3.1:68779608-68779627 | MS.gene79118:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | - | chr3.1:68779649-68779668 | MS.gene79118:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | - | chr3.1:68778142-68778161 | MS.gene79118:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | - | chr3.1:68778606-68778625 | MS.gene79118:intron | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr3.1:68779771-68779790 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | - | chr3.1:68777663-68777682 | MS.gene79118:CDS | 50.0% |
CTCAACGGTGTTCTTGAGGC+AGG | - | chr3.1:68779648-68779667 | MS.gene79118:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | + | chr3.1:68779040-68779059 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | - | chr3.1:68779662-68779681 | MS.gene79118:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr3.1:68777744-68777763 | MS.gene79118:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | - | chr3.1:68777666-68777685 | MS.gene79118:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | - | chr3.1:68779611-68779630 | MS.gene79118:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | - | chr3.1:68777671-68777690 | MS.gene79118:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 68777087 | 68779934 | 68777087 | ID=MS.gene79118 |
chr3.1 | mRNA | 68777087 | 68779934 | 68777087 | ID=MS.gene79118.t1;Parent=MS.gene79118 |
chr3.1 | exon | 68779052 | 68779934 | 68779052 | ID=MS.gene79118.t1.exon1;Parent=MS.gene79118.t1 |
chr3.1 | CDS | 68779052 | 68779934 | 68779052 | ID=cds.MS.gene79118.t1;Parent=MS.gene79118.t1 |
chr3.1 | exon | 68777204 | 68778617 | 68777204 | ID=MS.gene79118.t1.exon2;Parent=MS.gene79118.t1 |
chr3.1 | CDS | 68777204 | 68778617 | 68777204 | ID=cds.MS.gene79118.t1;Parent=MS.gene79118.t1 |
chr3.1 | exon | 68777087 | 68777096 | 68777087 | ID=MS.gene79118.t1.exon3;Parent=MS.gene79118.t1 |
chr3.1 | CDS | 68777087 | 68777096 | 68777087 | ID=cds.MS.gene79118.t1;Parent=MS.gene79118.t1 |
Gene Sequence |
Protein sequence |