Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79557.t1 | XP_003621267.1 | 66.2 | 349 | 77 | 2 | 1 | 308 | 1 | 349 | 2.80E-114 | 421.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79557.t1 | Q9FLJ2 | 51.6 | 215 | 81 | 2 | 13 | 204 | 10 | 224 | 4.6e-49 | 196.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79557.t1 | G7L222 | 66.2 | 349 | 77 | 2 | 1 | 308 | 1 | 349 | 2.0e-114 | 421.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene79557.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79557.t1 | MTR_7g011130 | 76.791 | 349 | 40 | 2 | 1 | 308 | 1 | 349 | 0.0 | 521 |
MS.gene79557.t1 | MTR_7g011120 | 74.540 | 326 | 35 | 4 | 12 | 308 | 1 | 307 | 4.72e-167 | 466 |
MS.gene79557.t1 | MTR_3g070030 | 64.167 | 360 | 66 | 5 | 1 | 308 | 1 | 349 | 1.36e-154 | 436 |
MS.gene79557.t1 | MTR_3g070040 | 61.272 | 346 | 71 | 6 | 12 | 308 | 1 | 332 | 3.46e-137 | 392 |
MS.gene79557.t1 | MTR_6g012670 | 48.495 | 299 | 111 | 7 | 15 | 287 | 16 | 297 | 1.61e-80 | 247 |
MS.gene79557.t1 | MTR_4g108760 | 49.027 | 257 | 102 | 6 | 5 | 237 | 2 | 253 | 3.70e-68 | 216 |
MS.gene79557.t1 | MTR_3g435150 | 51.598 | 219 | 83 | 2 | 5 | 202 | 2 | 218 | 6.02e-66 | 209 |
MS.gene79557.t1 | MTR_6g084430 | 48.908 | 229 | 95 | 3 | 19 | 230 | 5 | 228 | 7.10e-61 | 197 |
MS.gene79557.t1 | MTR_6g032770 | 55.307 | 179 | 55 | 3 | 15 | 168 | 14 | 192 | 2.89e-60 | 197 |
MS.gene79557.t1 | MTR_2g078700 | 61.146 | 157 | 38 | 2 | 19 | 152 | 23 | 179 | 3.18e-60 | 197 |
MS.gene79557.t1 | MTR_7g085260 | 53.476 | 187 | 61 | 4 | 5 | 165 | 3 | 189 | 1.96e-57 | 189 |
MS.gene79557.t1 | MTR_3g109340 | 55.484 | 155 | 50 | 2 | 19 | 154 | 22 | 176 | 8.10e-54 | 179 |
MS.gene79557.t1 | MTR_3g109340 | 55.128 | 156 | 50 | 2 | 19 | 154 | 22 | 177 | 1.16e-53 | 179 |
MS.gene79557.t1 | MTR_1g008740 | 55.414 | 157 | 49 | 3 | 19 | 154 | 13 | 169 | 2.23e-53 | 178 |
MS.gene79557.t1 | MTR_1g008740 | 55.414 | 157 | 49 | 3 | 19 | 154 | 27 | 183 | 2.97e-53 | 178 |
MS.gene79557.t1 | MTR_3g116070 | 48.259 | 201 | 86 | 5 | 19 | 202 | 23 | 222 | 3.88e-51 | 172 |
MS.gene79557.t1 | MTR_1g069805 | 38.767 | 227 | 118 | 4 | 19 | 227 | 10 | 233 | 2.56e-46 | 157 |
MS.gene79557.t1 | MTR_4g036030 | 50.000 | 150 | 55 | 2 | 20 | 149 | 8 | 157 | 3.15e-45 | 157 |
MS.gene79557.t1 | MTR_4g101680 | 50.667 | 150 | 54 | 2 | 20 | 149 | 8 | 157 | 4.32e-45 | 157 |
MS.gene79557.t1 | MTR_2g064470 | 46.835 | 158 | 60 | 3 | 12 | 148 | 4 | 158 | 9.34e-44 | 152 |
MS.gene79557.t1 | MTR_5g012080 | 49.342 | 152 | 55 | 3 | 20 | 149 | 8 | 159 | 9.65e-44 | 153 |
MS.gene79557.t1 | MTR_4g035590 | 51.333 | 150 | 54 | 2 | 20 | 150 | 9 | 158 | 1.08e-43 | 153 |
MS.gene79557.t1 | MTR_2g062730 | 48.077 | 156 | 60 | 3 | 16 | 150 | 7 | 162 | 4.11e-43 | 151 |
MS.gene79557.t1 | MTR_5g021710 | 48.667 | 150 | 57 | 2 | 20 | 149 | 9 | 158 | 2.00e-42 | 149 |
MS.gene79557.t1 | MTR_8g024480 | 44.118 | 170 | 64 | 2 | 18 | 156 | 14 | 183 | 2.08e-41 | 149 |
MS.gene79557.t1 | MTR_8g076110 | 46.667 | 150 | 60 | 2 | 20 | 149 | 7 | 156 | 2.35e-41 | 145 |
MS.gene79557.t1 | MTR_3g093040 | 52.846 | 123 | 56 | 1 | 17 | 137 | 106 | 228 | 3.27e-41 | 145 |
MS.gene79557.t1 | MTR_8g059170 | 42.593 | 162 | 72 | 1 | 14 | 154 | 9 | 170 | 4.90e-41 | 145 |
MS.gene79557.t1 | MTR_3g093050 | 48.630 | 146 | 67 | 2 | 19 | 162 | 22 | 161 | 8.59e-41 | 149 |
MS.gene79557.t1 | MTR_7g097090 | 45.205 | 146 | 63 | 2 | 19 | 147 | 10 | 155 | 9.65e-41 | 144 |
MS.gene79557.t1 | MTR_3g093050 | 48.630 | 146 | 67 | 2 | 19 | 162 | 22 | 161 | 1.28e-40 | 149 |
MS.gene79557.t1 | MTR_2g079990 | 41.718 | 163 | 76 | 1 | 11 | 154 | 8 | 170 | 1.38e-40 | 145 |
MS.gene79557.t1 | MTR_3g096920 | 41.818 | 165 | 73 | 2 | 16 | 158 | 4 | 167 | 3.04e-40 | 142 |
MS.gene79557.t1 | MTR_5g069030 | 47.619 | 147 | 69 | 2 | 18 | 162 | 24 | 164 | 3.18e-40 | 148 |
MS.gene79557.t1 | MTR_8g094580 | 42.169 | 166 | 72 | 2 | 17 | 159 | 5 | 169 | 3.41e-40 | 142 |
MS.gene79557.t1 | MTR_2g064090 | 52.033 | 123 | 57 | 1 | 17 | 137 | 4 | 126 | 4.85e-40 | 143 |
MS.gene79557.t1 | MTR_4g081870 | 40.994 | 161 | 72 | 1 | 18 | 155 | 8 | 168 | 1.14e-39 | 140 |
MS.gene79557.t1 | MTR_1g096430 | 45.223 | 157 | 65 | 4 | 12 | 148 | 1 | 156 | 1.95e-39 | 141 |
MS.gene79557.t1 | MTR_2g064730 | 86.842 | 76 | 9 | 1 | 186 | 260 | 6 | 81 | 2.16e-39 | 134 |
MS.gene79557.t1 | MTR_6g477900 | 52.033 | 123 | 57 | 1 | 17 | 137 | 4 | 126 | 2.79e-39 | 138 |
MS.gene79557.t1 | MTR_2g079990 | 49.606 | 127 | 64 | 0 | 11 | 137 | 8 | 134 | 3.01e-39 | 142 |
MS.gene79557.t1 | MTR_7g005280 | 45.570 | 158 | 64 | 4 | 16 | 154 | 12 | 166 | 3.20e-39 | 139 |
MS.gene79557.t1 | MTR_3g088110 | 42.308 | 156 | 67 | 2 | 16 | 149 | 4 | 158 | 4.51e-39 | 139 |
MS.gene79557.t1 | MTR_3g096920 | 48.252 | 143 | 69 | 3 | 16 | 156 | 4 | 143 | 8.90e-39 | 139 |
MS.gene79557.t1 | MTR_5g076850 | 52.033 | 123 | 57 | 1 | 17 | 137 | 4 | 126 | 1.75e-38 | 144 |
MS.gene79557.t1 | MTR_3g064580 | 51.220 | 123 | 58 | 1 | 17 | 137 | 4 | 126 | 2.51e-38 | 143 |
MS.gene79557.t1 | MTR_5g041940 | 40.123 | 162 | 74 | 1 | 17 | 155 | 1 | 162 | 7.51e-38 | 135 |
MS.gene79557.t1 | MTR_4g098630 | 37.681 | 207 | 104 | 5 | 14 | 195 | 1 | 207 | 7.52e-38 | 137 |
MS.gene79557.t1 | MTR_0036s0150 | 45.963 | 161 | 65 | 4 | 22 | 161 | 8 | 167 | 5.32e-37 | 139 |
MS.gene79557.t1 | MTR_4g089135 | 46.667 | 135 | 70 | 1 | 19 | 151 | 15 | 149 | 8.80e-37 | 134 |
MS.gene79557.t1 | MTR_1g090723 | 45.342 | 161 | 66 | 4 | 22 | 161 | 11 | 170 | 1.84e-36 | 137 |
MS.gene79557.t1 | MTR_1g090723 | 45.342 | 161 | 66 | 4 | 22 | 161 | 11 | 170 | 2.15e-36 | 138 |
MS.gene79557.t1 | MTR_5g014300 | 49.219 | 128 | 56 | 2 | 19 | 137 | 6 | 133 | 2.29e-36 | 133 |
MS.gene79557.t1 | MTR_2g080010 | 48.000 | 125 | 63 | 1 | 15 | 137 | 11 | 135 | 3.05e-36 | 133 |
MS.gene79557.t1 | MTR_1g090723 | 45.062 | 162 | 66 | 4 | 22 | 161 | 11 | 171 | 3.05e-36 | 137 |
MS.gene79557.t1 | MTR_2157s0010 | 40.854 | 164 | 66 | 2 | 19 | 151 | 8 | 171 | 1.18e-35 | 129 |
MS.gene79557.t1 | MTR_7g085220 | 40.237 | 169 | 69 | 3 | 12 | 148 | 1 | 169 | 1.69e-35 | 131 |
MS.gene79557.t1 | MTR_8g467490 | 47.244 | 127 | 64 | 2 | 13 | 137 | 9 | 134 | 1.92e-35 | 132 |
MS.gene79557.t1 | MTR_8g063550 | 38.202 | 178 | 86 | 4 | 12 | 168 | 1 | 175 | 2.18e-35 | 130 |
MS.gene79557.t1 | MTR_7g100990 | 42.405 | 158 | 66 | 2 | 16 | 148 | 8 | 165 | 2.62e-35 | 130 |
MS.gene79557.t1 | MTR_2g086880 | 48.333 | 120 | 60 | 2 | 19 | 137 | 19 | 137 | 5.63e-35 | 133 |
MS.gene79557.t1 | MTR_2g086880 | 48.333 | 120 | 60 | 2 | 19 | 137 | 19 | 137 | 6.09e-35 | 133 |
MS.gene79557.t1 | MTR_8g063550 | 38.202 | 178 | 86 | 4 | 12 | 168 | 1 | 175 | 6.49e-35 | 131 |
MS.gene79557.t1 | MTR_8g063550 | 38.202 | 178 | 86 | 4 | 12 | 168 | 1 | 175 | 6.65e-35 | 131 |
MS.gene79557.t1 | MTR_5g040420 | 33.333 | 225 | 118 | 4 | 13 | 206 | 9 | 232 | 1.85e-34 | 129 |
MS.gene79557.t1 | MTR_6g011860 | 31.679 | 262 | 138 | 5 | 11 | 231 | 6 | 267 | 2.91e-34 | 129 |
MS.gene79557.t1 | MTR_2g093810 | 48.760 | 121 | 60 | 1 | 19 | 137 | 14 | 134 | 6.65e-34 | 126 |
MS.gene79557.t1 | MTR_3g096140 | 38.506 | 174 | 84 | 4 | 16 | 168 | 5 | 176 | 7.18e-34 | 125 |
MS.gene79557.t1 | MTR_1g097300 | 41.615 | 161 | 72 | 3 | 22 | 161 | 22 | 181 | 2.74e-33 | 129 |
MS.gene79557.t1 | MTR_3g096140 | 38.506 | 174 | 84 | 4 | 16 | 168 | 5 | 176 | 3.53e-33 | 125 |
MS.gene79557.t1 | MTR_8g093580 | 37.079 | 178 | 88 | 4 | 12 | 168 | 1 | 175 | 5.27e-33 | 127 |
MS.gene79557.t1 | MTR_1g090720 | 50.420 | 119 | 57 | 1 | 21 | 137 | 44 | 162 | 2.54e-32 | 125 |
MS.gene79557.t1 | MTR_8g023840 | 52.033 | 123 | 53 | 5 | 20 | 137 | 12 | 133 | 3.89e-31 | 120 |
MS.gene79557.t1 | MTR_4g134460 | 46.610 | 118 | 62 | 1 | 21 | 137 | 56 | 173 | 4.92e-31 | 120 |
MS.gene79557.t1 | MTR_8g023860 | 48.438 | 128 | 57 | 5 | 20 | 142 | 13 | 136 | 3.43e-30 | 118 |
MS.gene79557.t1 | MTR_2g068920 | 42.069 | 145 | 75 | 4 | 1 | 137 | 1 | 144 | 2.10e-29 | 114 |
MS.gene79557.t1 | MTR_2g068880 | 30.094 | 319 | 168 | 9 | 1 | 280 | 1 | 303 | 3.26e-29 | 114 |
MS.gene79557.t1 | MTR_5g090970 | 35.593 | 177 | 106 | 3 | 15 | 188 | 15 | 186 | 9.55e-29 | 112 |
MS.gene79557.t1 | MTR_4g075980 | 40.714 | 140 | 76 | 3 | 1 | 137 | 1 | 136 | 2.61e-27 | 108 |
MS.gene79557.t1 | MTR_5g090970 | 35.593 | 177 | 105 | 4 | 15 | 188 | 15 | 185 | 5.32e-27 | 107 |
MS.gene79557.t1 | MTR_3g096140 | 37.013 | 154 | 75 | 3 | 36 | 168 | 3 | 155 | 1.25e-26 | 107 |
MS.gene79557.t1 | MTR_8g099750 | 41.803 | 122 | 67 | 2 | 18 | 137 | 13 | 132 | 3.61e-26 | 103 |
MS.gene79557.t1 | MTR_4g052620 | 42.063 | 126 | 65 | 4 | 19 | 137 | 5 | 129 | 5.80e-26 | 103 |
MS.gene79557.t1 | MTR_2g086690 | 40.000 | 125 | 68 | 3 | 20 | 137 | 5 | 129 | 1.52e-25 | 102 |
MS.gene79557.t1 | MTR_8g023900 | 41.935 | 124 | 66 | 4 | 19 | 137 | 12 | 134 | 6.63e-24 | 101 |
MS.gene79557.t1 | MTR_8g023900 | 31.646 | 237 | 118 | 11 | 21 | 224 | 195 | 420 | 1.66e-22 | 97.4 |
MS.gene79557.t1 | MTR_8g023930 | 42.742 | 124 | 65 | 5 | 19 | 137 | 24 | 146 | 1.46e-22 | 97.8 |
MS.gene79557.t1 | MTR_3g098810 | 38.710 | 124 | 70 | 2 | 18 | 137 | 13 | 134 | 3.17e-22 | 91.7 |
MS.gene79557.t1 | MTR_7g105170 | 39.683 | 126 | 69 | 4 | 19 | 137 | 4 | 129 | 3.81e-22 | 93.6 |
MS.gene79557.t1 | MTR_3g098810 | 32.919 | 161 | 77 | 3 | 18 | 149 | 13 | 171 | 4.30e-22 | 93.2 |
MS.gene79557.t1 | MTR_8g094580 | 41.379 | 116 | 44 | 2 | 67 | 159 | 1 | 115 | 1.07e-21 | 91.7 |
MS.gene79557.t1 | MTR_8g023880 | 42.029 | 138 | 58 | 7 | 19 | 137 | 7 | 141 | 4.08e-21 | 90.9 |
MS.gene79557.t1 | MTR_4g094302 | 29.586 | 169 | 84 | 3 | 19 | 160 | 11 | 171 | 4.06e-20 | 86.7 |
MS.gene79557.t1 | MTR_4g094302 | 35.537 | 121 | 68 | 2 | 19 | 137 | 11 | 123 | 1.08e-19 | 84.3 |
MS.gene79557.t1 | MTR_7g070140 | 51.471 | 68 | 31 | 1 | 72 | 137 | 17 | 84 | 7.93e-17 | 76.3 |
MS.gene79557.t1 | MTR_8g093790 | 35.526 | 152 | 70 | 5 | 17 | 156 | 8 | 143 | 1.09e-16 | 77.0 |
MS.gene79557.t1 | MTR_7g083360 | 32.847 | 137 | 84 | 6 | 16 | 147 | 7 | 140 | 1.98e-16 | 75.5 |
MS.gene79557.t1 | MTR_7g083330 | 29.927 | 137 | 88 | 6 | 17 | 148 | 16 | 149 | 3.04e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79557.t1 | AT5G61430 | 41.441 | 333 | 131 | 10 | 13 | 289 | 10 | 334 | 3.35e-66 | 211 |
MS.gene79557.t1 | AT5G07680 | 46.063 | 254 | 101 | 5 | 10 | 230 | 8 | 258 | 2.25e-65 | 208 |
MS.gene79557.t1 | AT5G07680 | 46.939 | 245 | 94 | 5 | 19 | 230 | 3 | 244 | 7.03e-65 | 207 |
MS.gene79557.t1 | AT5G39610 | 58.084 | 167 | 49 | 1 | 15 | 160 | 16 | 182 | 9.09e-62 | 198 |
MS.gene79557.t1 | AT3G29035 | 56.069 | 173 | 55 | 1 | 3 | 154 | 8 | 180 | 1.65e-61 | 198 |
MS.gene79557.t1 | AT3G18400 | 58.442 | 154 | 46 | 1 | 19 | 154 | 5 | 158 | 4.27e-59 | 192 |
MS.gene79557.t1 | AT5G18270 | 58.228 | 158 | 44 | 2 | 15 | 150 | 17 | 174 | 1.17e-58 | 191 |
MS.gene79557.t1 | AT5G18270 | 58.228 | 158 | 44 | 2 | 15 | 150 | 17 | 174 | 1.83e-58 | 191 |
MS.gene79557.t1 | AT3G04060 | 39.726 | 292 | 120 | 7 | 7 | 274 | 8 | 267 | 1.02e-56 | 186 |
MS.gene79557.t1 | AT5G53950 | 58.170 | 153 | 41 | 2 | 19 | 148 | 17 | 169 | 1.98e-56 | 187 |
MS.gene79557.t1 | AT2G24430 | 52.941 | 170 | 60 | 2 | 5 | 154 | 2 | 171 | 1.88e-54 | 180 |
MS.gene79557.t1 | AT2G24430 | 52.941 | 170 | 60 | 2 | 5 | 154 | 2 | 171 | 1.88e-54 | 180 |
MS.gene79557.t1 | AT1G76420 | 54.667 | 150 | 48 | 2 | 19 | 148 | 22 | 171 | 1.06e-53 | 179 |
MS.gene79557.t1 | AT3G15170 | 67.500 | 120 | 37 | 1 | 20 | 137 | 21 | 140 | 6.12e-52 | 173 |
MS.gene79557.t1 | AT3G12977 | 33.766 | 231 | 118 | 4 | 19 | 227 | 18 | 235 | 7.39e-46 | 156 |
MS.gene79557.t1 | AT1G12260 | 51.333 | 150 | 53 | 2 | 20 | 149 | 8 | 157 | 2.46e-45 | 157 |
MS.gene79557.t1 | AT1G12260 | 51.333 | 150 | 53 | 2 | 20 | 149 | 8 | 157 | 3.54e-45 | 158 |
MS.gene79557.t1 | AT5G66300 | 49.673 | 153 | 56 | 2 | 19 | 150 | 12 | 164 | 1.90e-44 | 153 |
MS.gene79557.t1 | AT1G62700 | 51.316 | 152 | 54 | 3 | 18 | 149 | 6 | 157 | 2.43e-44 | 155 |
MS.gene79557.t1 | AT1G62700 | 51.316 | 152 | 54 | 3 | 18 | 149 | 6 | 157 | 2.43e-44 | 155 |
MS.gene79557.t1 | AT1G56010 | 40.000 | 175 | 82 | 2 | 1 | 152 | 1 | 175 | 2.90e-44 | 154 |
MS.gene79557.t1 | AT2G18060 | 46.012 | 163 | 68 | 2 | 14 | 156 | 4 | 166 | 1.82e-43 | 152 |
MS.gene79557.t1 | AT2G18060 | 46.012 | 163 | 68 | 2 | 14 | 156 | 4 | 166 | 1.82e-43 | 152 |
MS.gene79557.t1 | AT4G10350 | 49.686 | 159 | 58 | 3 | 20 | 156 | 10 | 168 | 5.41e-43 | 151 |
MS.gene79557.t1 | AT5G62380 | 45.349 | 172 | 68 | 3 | 17 | 162 | 5 | 176 | 5.77e-43 | 151 |
MS.gene79557.t1 | AT5G62380 | 45.349 | 172 | 68 | 3 | 17 | 162 | 5 | 176 | 5.77e-43 | 151 |
MS.gene79557.t1 | AT1G33280 | 45.930 | 172 | 74 | 2 | 20 | 172 | 9 | 180 | 1.05e-42 | 149 |
MS.gene79557.t1 | AT2G46770 | 42.781 | 187 | 71 | 3 | 18 | 169 | 15 | 200 | 1.11e-42 | 150 |
MS.gene79557.t1 | AT1G71930 | 39.474 | 228 | 111 | 5 | 14 | 215 | 4 | 230 | 3.99e-42 | 148 |
MS.gene79557.t1 | AT1G71930 | 39.474 | 228 | 111 | 5 | 14 | 215 | 4 | 230 | 3.99e-42 | 148 |
MS.gene79557.t1 | AT1G33060 | 49.315 | 146 | 66 | 2 | 19 | 162 | 24 | 163 | 5.21e-42 | 154 |
MS.gene79557.t1 | AT1G33060 | 49.315 | 146 | 66 | 2 | 19 | 162 | 24 | 163 | 6.00e-42 | 154 |
MS.gene79557.t1 | AT4G35580 | 48.980 | 147 | 67 | 2 | 19 | 163 | 9 | 149 | 7.25e-42 | 151 |
MS.gene79557.t1 | AT4G35580 | 48.980 | 147 | 67 | 2 | 19 | 163 | 9 | 149 | 8.10e-42 | 152 |
MS.gene79557.t1 | AT4G35580 | 48.980 | 147 | 67 | 2 | 19 | 163 | 9 | 149 | 9.09e-42 | 151 |
MS.gene79557.t1 | AT4G36160 | 47.333 | 150 | 59 | 2 | 20 | 149 | 11 | 160 | 3.38e-41 | 147 |
MS.gene79557.t1 | AT4G36160 | 47.333 | 150 | 59 | 2 | 20 | 149 | 11 | 160 | 3.38e-41 | 147 |
MS.gene79557.t1 | AT4G36160 | 47.333 | 150 | 59 | 2 | 20 | 149 | 15 | 164 | 4.25e-41 | 147 |
MS.gene79557.t1 | AT4G27410 | 45.455 | 143 | 78 | 0 | 10 | 152 | 5 | 147 | 8.42e-41 | 144 |
MS.gene79557.t1 | AT1G79580 | 46.795 | 156 | 63 | 3 | 16 | 151 | 14 | 169 | 9.58e-41 | 145 |
MS.gene79557.t1 | AT1G79580 | 46.795 | 156 | 63 | 3 | 16 | 151 | 14 | 169 | 9.58e-41 | 145 |
MS.gene79557.t1 | AT1G79580 | 46.795 | 156 | 63 | 3 | 16 | 151 | 14 | 169 | 9.58e-41 | 145 |
MS.gene79557.t1 | AT1G79580 | 46.795 | 156 | 63 | 3 | 16 | 151 | 14 | 169 | 9.58e-41 | 145 |
MS.gene79557.t1 | AT1G79580 | 46.795 | 156 | 63 | 3 | 16 | 151 | 14 | 169 | 9.58e-41 | 145 |
MS.gene79557.t1 | AT3G61910 | 42.775 | 173 | 64 | 2 | 18 | 155 | 10 | 182 | 1.85e-40 | 144 |
MS.gene79557.t1 | AT3G15500 | 41.250 | 160 | 75 | 1 | 14 | 154 | 9 | 168 | 1.98e-40 | 143 |
MS.gene79557.t1 | AT5G61430 | 58.333 | 120 | 29 | 1 | 67 | 165 | 1 | 120 | 2.10e-40 | 142 |
MS.gene79557.t1 | AT1G52890 | 41.875 | 160 | 74 | 1 | 14 | 154 | 9 | 168 | 5.17e-40 | 142 |
MS.gene79557.t1 | AT5G46590 | 33.333 | 294 | 155 | 8 | 19 | 305 | 6 | 265 | 1.37e-39 | 140 |
MS.gene79557.t1 | AT1G32770 | 42.077 | 183 | 74 | 2 | 18 | 168 | 15 | 197 | 1.44e-39 | 142 |
MS.gene79557.t1 | AT5G08790 | 42.945 | 163 | 68 | 2 | 16 | 154 | 4 | 165 | 1.55e-39 | 140 |
MS.gene79557.t1 | AT2G27300 | 35.217 | 230 | 117 | 5 | 19 | 223 | 15 | 237 | 2.06e-39 | 141 |
MS.gene79557.t1 | AT1G77450 | 42.308 | 156 | 67 | 2 | 17 | 150 | 8 | 162 | 2.21e-39 | 139 |
MS.gene79557.t1 | AT3G17730 | 51.220 | 123 | 58 | 1 | 17 | 137 | 4 | 126 | 4.69e-39 | 138 |
MS.gene79557.t1 | AT5G04410 | 45.342 | 161 | 66 | 3 | 22 | 161 | 12 | 171 | 1.50e-38 | 143 |
MS.gene79557.t1 | AT5G63790 | 42.857 | 168 | 70 | 3 | 11 | 154 | 43 | 208 | 1.66e-38 | 138 |
MS.gene79557.t1 | AT1G01720 | 41.509 | 159 | 69 | 2 | 15 | 150 | 3 | 160 | 1.87e-38 | 137 |
MS.gene79557.t1 | AT5G63790 | 42.857 | 168 | 70 | 3 | 11 | 154 | 53 | 218 | 2.04e-38 | 138 |
MS.gene79557.t1 | AT3G10500 | 44.099 | 161 | 68 | 3 | 22 | 161 | 12 | 171 | 2.18e-38 | 142 |
MS.gene79557.t1 | AT1G65910 | 50.407 | 123 | 59 | 1 | 17 | 137 | 4 | 126 | 3.04e-38 | 143 |
MS.gene79557.t1 | AT3G03200 | 52.033 | 123 | 57 | 1 | 17 | 137 | 4 | 126 | 5.22e-38 | 140 |
MS.gene79557.t1 | AT1G54330 | 52.381 | 126 | 58 | 1 | 14 | 137 | 1 | 126 | 5.53e-38 | 137 |
MS.gene79557.t1 | AT2G33480 | 45.333 | 150 | 62 | 2 | 17 | 149 | 13 | 159 | 1.28e-37 | 135 |
MS.gene79557.t1 | AT3G49530 | 45.946 | 148 | 71 | 3 | 19 | 163 | 13 | 154 | 1.32e-37 | 138 |
MS.gene79557.t1 | AT1G26870 | 48.921 | 139 | 66 | 3 | 1 | 137 | 1 | 136 | 2.13e-37 | 138 |
MS.gene79557.t1 | AT5G24590 | 32.558 | 301 | 164 | 7 | 19 | 294 | 13 | 299 | 2.21e-37 | 138 |
MS.gene79557.t1 | AT4G28530 | 41.463 | 164 | 63 | 3 | 18 | 148 | 9 | 172 | 2.22e-37 | 136 |
MS.gene79557.t1 | AT1G69490 | 41.615 | 161 | 71 | 1 | 19 | 156 | 9 | 169 | 2.36e-37 | 134 |
MS.gene79557.t1 | AT5G46590 | 52.459 | 122 | 55 | 2 | 19 | 137 | 6 | 127 | 2.41e-37 | 134 |
MS.gene79557.t1 | AT2G33480 | 44.737 | 152 | 62 | 2 | 17 | 149 | 13 | 161 | 2.41e-37 | 134 |
MS.gene79557.t1 | AT5G13180 | 42.405 | 158 | 68 | 3 | 17 | 154 | 12 | 166 | 2.66e-37 | 134 |
MS.gene79557.t1 | AT1G61110 | 47.761 | 134 | 69 | 1 | 5 | 137 | 2 | 135 | 3.07e-37 | 135 |
MS.gene79557.t1 | AT5G17260 | 50.407 | 123 | 59 | 1 | 17 | 137 | 4 | 126 | 4.07e-37 | 138 |
MS.gene79557.t1 | AT3G49530 | 43.558 | 163 | 79 | 4 | 4 | 163 | 2 | 154 | 4.22e-37 | 138 |
MS.gene79557.t1 | AT3G10490 | 45.752 | 153 | 61 | 2 | 22 | 152 | 30 | 182 | 8.01e-37 | 132 |
MS.gene79557.t1 | AT3G10480 | 47.368 | 152 | 59 | 2 | 22 | 152 | 30 | 181 | 8.36e-37 | 137 |
MS.gene79557.t1 | AT3G10480 | 47.059 | 153 | 59 | 2 | 22 | 152 | 30 | 182 | 1.12e-36 | 136 |
MS.gene79557.t1 | AT4G27410 | 40.625 | 160 | 78 | 1 | 10 | 152 | 5 | 164 | 2.33e-36 | 132 |
MS.gene79557.t1 | AT3G04070 | 50.806 | 124 | 56 | 1 | 19 | 137 | 10 | 133 | 9.56e-36 | 132 |
MS.gene79557.t1 | AT3G04070 | 50.806 | 124 | 56 | 1 | 19 | 137 | 10 | 133 | 1.39e-35 | 132 |
MS.gene79557.t1 | AT3G10490 | 45.752 | 153 | 61 | 2 | 22 | 152 | 30 | 182 | 2.28e-35 | 133 |
MS.gene79557.t1 | AT4G17980 | 50.407 | 123 | 57 | 2 | 19 | 137 | 6 | 128 | 2.95e-35 | 128 |
MS.gene79557.t1 | AT4G17980 | 50.407 | 123 | 57 | 2 | 19 | 137 | 6 | 128 | 8.14e-35 | 128 |
MS.gene79557.t1 | AT5G39820 | 49.153 | 118 | 58 | 1 | 22 | 137 | 23 | 140 | 3.43e-34 | 127 |
MS.gene79557.t1 | AT3G15510 | 37.870 | 169 | 73 | 2 | 23 | 159 | 21 | 189 | 3.81e-34 | 128 |
MS.gene79557.t1 | AT5G22290 | 46.667 | 120 | 62 | 2 | 19 | 137 | 22 | 140 | 9.96e-34 | 126 |
MS.gene79557.t1 | AT2G43000 | 28.866 | 291 | 180 | 5 | 1 | 283 | 1 | 272 | 1.54e-33 | 124 |
MS.gene79557.t1 | AT3G44290 | 46.667 | 120 | 62 | 2 | 19 | 137 | 15 | 133 | 2.79e-33 | 122 |
MS.gene79557.t1 | AT1G32510 | 45.312 | 128 | 61 | 2 | 19 | 137 | 6 | 133 | 2.19e-32 | 121 |
MS.gene79557.t1 | AT3G44290 | 46.667 | 120 | 62 | 2 | 19 | 137 | 15 | 133 | 2.64e-32 | 122 |
MS.gene79557.t1 | AT2G02450 | 48.718 | 117 | 59 | 1 | 22 | 137 | 54 | 170 | 2.98e-32 | 123 |
MS.gene79557.t1 | AT2G02450 | 48.718 | 117 | 59 | 1 | 22 | 137 | 54 | 170 | 3.25e-32 | 124 |
MS.gene79557.t1 | AT3G10480 | 39.247 | 186 | 58 | 2 | 22 | 152 | 30 | 215 | 2.65e-31 | 122 |
MS.gene79557.t1 | AT5G09330 | 36.527 | 167 | 84 | 3 | 16 | 161 | 3 | 168 | 3.59e-31 | 122 |
MS.gene79557.t1 | AT5G09330 | 36.527 | 167 | 84 | 3 | 16 | 161 | 3 | 168 | 3.59e-31 | 122 |
MS.gene79557.t1 | AT5G09330 | 36.527 | 167 | 84 | 3 | 16 | 161 | 3 | 168 | 3.59e-31 | 122 |
MS.gene79557.t1 | AT5G09330 | 36.527 | 167 | 84 | 3 | 16 | 161 | 3 | 168 | 3.59e-31 | 122 |
MS.gene79557.t1 | AT5G09330 | 36.527 | 167 | 84 | 3 | 16 | 161 | 3 | 168 | 3.59e-31 | 122 |
MS.gene79557.t1 | AT5G64060 | 41.935 | 124 | 70 | 1 | 16 | 137 | 3 | 126 | 1.17e-30 | 118 |
MS.gene79557.t1 | AT1G52880 | 38.994 | 159 | 66 | 2 | 23 | 150 | 21 | 179 | 3.53e-29 | 114 |
MS.gene79557.t1 | AT1G34180 | 40.260 | 154 | 78 | 3 | 18 | 168 | 14 | 156 | 4.98e-29 | 115 |
MS.gene79557.t1 | AT1G34180 | 40.260 | 154 | 78 | 3 | 18 | 168 | 14 | 156 | 8.12e-29 | 116 |
MS.gene79557.t1 | AT1G34190 | 46.341 | 123 | 63 | 2 | 18 | 137 | 14 | 136 | 1.39e-28 | 115 |
MS.gene79557.t1 | AT4G28530 | 38.776 | 147 | 54 | 3 | 18 | 148 | 9 | 135 | 5.35e-28 | 110 |
MS.gene79557.t1 | AT2G17040 | 41.129 | 124 | 69 | 2 | 17 | 137 | 5 | 127 | 1.18e-27 | 108 |
MS.gene79557.t1 | AT1G32870 | 41.892 | 148 | 80 | 3 | 12 | 155 | 3 | 148 | 2.18e-27 | 112 |
MS.gene79557.t1 | AT1G32870 | 41.892 | 148 | 80 | 3 | 12 | 155 | 3 | 148 | 2.33e-27 | 112 |
MS.gene79557.t1 | AT1G34180 | 37.349 | 166 | 78 | 3 | 18 | 168 | 14 | 168 | 2.81e-27 | 110 |
MS.gene79557.t1 | AT1G32870 | 45.312 | 128 | 66 | 2 | 12 | 137 | 39 | 164 | 3.15e-27 | 111 |
MS.gene79557.t1 | AT1G34180 | 37.349 | 166 | 78 | 3 | 18 | 168 | 14 | 168 | 3.81e-27 | 111 |
MS.gene79557.t1 | AT3G12910 | 44.444 | 126 | 63 | 4 | 17 | 137 | 20 | 143 | 1.06e-26 | 107 |
MS.gene79557.t1 | AT3G12977 | 32.609 | 184 | 89 | 4 | 66 | 227 | 12 | 182 | 2.39e-26 | 104 |
MS.gene79557.t1 | AT5G04395 | 40.741 | 135 | 64 | 2 | 19 | 137 | 28 | 162 | 1.91e-25 | 100 |
MS.gene79557.t1 | AT4G10350 | 47.826 | 115 | 38 | 3 | 64 | 156 | 7 | 121 | 6.64e-24 | 99.4 |
MS.gene79557.t1 | AT1G56010 | 43.519 | 108 | 39 | 1 | 67 | 152 | 1 | 108 | 1.36e-23 | 97.4 |
MS.gene79557.t1 | AT4G01550 | 40.909 | 132 | 69 | 5 | 17 | 142 | 2 | 130 | 1.82e-22 | 97.4 |
MS.gene79557.t1 | AT5G22380 | 37.097 | 124 | 69 | 4 | 22 | 137 | 8 | 130 | 3.18e-21 | 90.5 |
MS.gene79557.t1 | AT3G44350 | 34.959 | 123 | 74 | 3 | 21 | 137 | 7 | 129 | 3.40e-20 | 85.9 |
MS.gene79557.t1 | AT2G33480 | 44.330 | 97 | 35 | 1 | 72 | 149 | 8 | 104 | 4.25e-20 | 87.0 |
MS.gene79557.t1 | AT3G44350 | 34.959 | 123 | 74 | 3 | 21 | 137 | 7 | 129 | 1.50e-19 | 86.3 |
MS.gene79557.t1 | AT5G64530 | 36.364 | 121 | 63 | 3 | 19 | 137 | 3 | 111 | 2.08e-19 | 83.6 |
MS.gene79557.t1 | AT4G01520 | 37.500 | 128 | 73 | 5 | 17 | 137 | 2 | 129 | 3.52e-19 | 86.3 |
MS.gene79557.t1 | AT5G64530 | 36.364 | 121 | 63 | 3 | 19 | 137 | 3 | 111 | 1.34e-18 | 82.4 |
MS.gene79557.t1 | AT1G02230 | 41.964 | 112 | 58 | 5 | 20 | 124 | 4 | 115 | 1.72e-18 | 85.1 |
MS.gene79557.t1 | AT4G01540 | 39.024 | 123 | 68 | 5 | 22 | 137 | 7 | 129 | 2.56e-18 | 85.1 |
MS.gene79557.t1 | AT4G01540 | 39.024 | 123 | 68 | 5 | 22 | 137 | 7 | 129 | 3.21e-18 | 84.7 |
MS.gene79557.t1 | AT4G01540 | 39.024 | 123 | 68 | 5 | 22 | 137 | 7 | 129 | 3.92e-18 | 84.7 |
MS.gene79557.t1 | AT4G01540 | 39.024 | 123 | 68 | 5 | 22 | 137 | 7 | 129 | 5.62e-18 | 84.3 |
MS.gene79557.t1 | AT3G04420 | 34.426 | 122 | 76 | 2 | 20 | 137 | 4 | 125 | 7.23e-18 | 82.4 |
MS.gene79557.t1 | AT3G04420 | 34.426 | 122 | 76 | 2 | 20 | 137 | 4 | 125 | 1.04e-17 | 82.8 |
MS.gene79557.t1 | AT1G02220 | 33.071 | 127 | 75 | 3 | 20 | 142 | 4 | 124 | 5.62e-16 | 78.2 |
MS.gene79557.t1 | AT5G14000 | 28.962 | 183 | 96 | 5 | 12 | 169 | 1 | 174 | 4.39e-15 | 73.2 |
MS.gene79557.t1 | AT1G02250 | 36.607 | 112 | 64 | 4 | 20 | 124 | 4 | 115 | 6.02e-15 | 75.1 |
MS.gene79557.t1 | AT3G56530 | 31.746 | 126 | 83 | 2 | 15 | 137 | 48 | 173 | 1.12e-14 | 73.9 |
MS.gene79557.t1 | AT5G14000 | 32.231 | 121 | 73 | 2 | 12 | 125 | 1 | 119 | 1.72e-14 | 70.1 |
MS.gene79557.t1 | AT1G01010 | 32.824 | 131 | 70 | 5 | 21 | 137 | 5 | 131 | 7.92e-14 | 72.0 |
MS.gene79557.t1 | AT3G10490 | 45.679 | 81 | 24 | 1 | 92 | 152 | 2 | 82 | 2.05e-13 | 70.5 |
MS.gene79557.t1 | AT3G10490 | 45.679 | 81 | 24 | 1 | 92 | 152 | 2 | 82 | 2.05e-13 | 70.5 |
MS.gene79557.t1 | AT3G04430 | 39.252 | 107 | 59 | 4 | 23 | 124 | 2 | 107 | 2.12e-13 | 68.2 |
MS.gene79557.t1 | AT2G18060 | 42.857 | 77 | 27 | 1 | 97 | 156 | 2 | 78 | 1.23e-12 | 67.4 |
Find 54 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAATTGTTGCTTCAGTTAA+AGG | 0.182371 | 7.3:+86944460 | None:intergenic |
TACAAGGGAAATTCATTAAC+TGG | 0.237255 | 7.3:-86945792 | MS.gene79557:CDS |
TTATTCAGAGATGGCTAAAA+TGG | 0.296774 | 7.3:-86945931 | MS.gene79557:intron |
GATATCTCATCTGTGGTATA+TGG | 0.312060 | 7.3:-86944346 | MS.gene79557:CDS |
TTTGGTTTCTCTGTTTGATT+TGG | 0.323737 | 7.3:+86944565 | None:intergenic |
TTCATCCTCTTCAAAACAAA+TGG | 0.371961 | 7.3:-86944491 | MS.gene79557:CDS |
CTGTTGGTCCTTTGACCAGT+TGG | 0.374709 | 7.3:+86945864 | None:intergenic |
CTCTCCCAAAAGAAAACTCT+TGG | 0.386693 | 7.3:+86944386 | None:intergenic |
GAGCTACTAATGCTGGCTAT+TGG | 0.389330 | 7.3:-86945842 | MS.gene79557:CDS |
CAATTGTTGCTTCAGTTAAA+GGG | 0.406411 | 7.3:+86944461 | None:intergenic |
GACATGCTTCAAAGGTGGTC+GGG | 0.419512 | 7.3:-86944319 | MS.gene79557:CDS |
TGTTGGTCCTTTGACCAGTT+GGG | 0.420869 | 7.3:+86945865 | None:intergenic |
TTTCTCTGTTTGATTTGGAT+TGG | 0.425619 | 7.3:+86944570 | None:intergenic |
TTTATAAGCTCTTCATCAGT+TGG | 0.426096 | 7.3:+86946824 | None:intergenic |
CGAGCGATGAACAATCCAAC+TGG | 0.427161 | 7.3:-86945731 | MS.gene79557:CDS |
AAAATGAATGGTTCAAAACT+TGG | 0.427761 | 7.3:-86944709 | MS.gene79557:CDS |
AATTCCCGACCATTGAGGTT+TGG | 0.437341 | 7.3:+86944428 | None:intergenic |
CCCGACCATTGAGGTTTGGT+TGG | 0.460124 | 7.3:+86944432 | None:intergenic |
AAATCAATACCTTGTCAAGA+AGG | 0.466786 | 7.3:-86946804 | MS.gene79557:CDS |
GAAATCTCAGAAGCTATCAT+TGG | 0.467463 | 7.3:+86944258 | None:intergenic |
GTCTTTGAGAAGCGTAATCA+TGG | 0.493003 | 7.3:-86944736 | MS.gene79557:CDS |
AATCATGGAAAGAAAATGAA+TGG | 0.519050 | 7.3:-86944721 | MS.gene79557:CDS |
CAGTTGGATTGTTCATCGCT+CGG | 0.526629 | 7.3:+86945732 | None:intergenic |
TCTCCCAAAAGAAAACTCTT+GGG | 0.526665 | 7.3:+86944387 | None:intergenic |
CCAACCAAACCTCAATGGTC+GGG | 0.527531 | 7.3:-86944432 | MS.gene79557:CDS |
ACCAACAGAGCTACTAATGC+TGG | 0.528873 | 7.3:-86945849 | MS.gene79557:CDS |
TCCAACCAAACCTCAATGGT+CGG | 0.539903 | 7.3:-86944433 | MS.gene79557:CDS |
ATGGAAATGACATGCTTCAA+AGG | 0.541226 | 7.3:-86944327 | MS.gene79557:CDS |
GCCAGCATTAGTAGCTCTGT+TGG | 0.543274 | 7.3:+86945848 | None:intergenic |
ACATGCTTCAAAGGTGGTCG+GGG | 0.553685 | 7.3:-86944318 | MS.gene79557:CDS |
CAAAGACAAAGAGATTTACA+AGG | 0.555962 | 7.3:-86945808 | MS.gene79557:CDS |
ACAAGGGAAATTCATTAACT+GGG | 0.558226 | 7.3:-86945791 | MS.gene79557:CDS |
TGATTCCAACCAAACCTCAA+TGG | 0.559757 | 7.3:-86944437 | MS.gene79557:CDS |
TGACATGCTTCAAAGGTGGT+CGG | 0.565490 | 7.3:-86944320 | MS.gene79557:CDS |
GTATTCATGCATGACCCAGT+TGG | 0.566311 | 7.3:+86945716 | None:intergenic |
AATTCACCTGGCAAATCCCA+TGG | 0.572720 | 7.3:+86946722 | None:intergenic |
AGGTCTAACTCCTCTAGAGA+TGG | 0.574295 | 7.3:-86944685 | MS.gene79557:CDS |
CTTCTGTGCTATAGCTATTG+CGG | 0.577625 | 7.3:-86946768 | MS.gene79557:CDS |
TGATGAATTCCCGACCATTG+AGG | 0.581485 | 7.3:+86944423 | None:intergenic |
GAAAAGGTCAAATTTCCCGC+TGG | 0.582719 | 7.3:-86946860 | MS.gene79557:CDS |
GCTGCAAGTCGAGTAGAAGC+TGG | 0.589005 | 7.3:+86944280 | None:intergenic |
TGGAAAGAATCGATAACCAG+CGG | 0.593934 | 7.3:+86946844 | None:intergenic |
TGAATGGTTCAAAACTTGGA+AGG | 0.595179 | 7.3:-86944705 | MS.gene79557:CDS |
GGAAAGAATCGATAACCAGC+GGG | 0.598033 | 7.3:+86946845 | None:intergenic |
CTAAAATGGAAGAAACAGAA+TGG | 0.615381 | 7.3:-86945917 | MS.gene79557:CDS |
TGTGAACCATGGGATTTGCC+AGG | 0.615720 | 7.3:-86946728 | MS.gene79557:intron |
AATTGAACGTCCATCTCTAG+AGG | 0.623412 | 7.3:+86944675 | None:intergenic |
TGTCATCAACCTTCTTGACA+AGG | 0.634308 | 7.3:+86946795 | None:intergenic |
TATGAATAAGTGTGAACCAT+GGG | 0.641317 | 7.3:-86946738 | MS.gene79557:CDS |
AAAGACAAAGAGATTTACAA+GGG | 0.662925 | 7.3:-86945807 | MS.gene79557:CDS |
TGATGCTGATATCTCATCTG+TGG | 0.664657 | 7.3:-86944353 | MS.gene79557:CDS |
GAAATGACATGCTTCAAAGG+TGG | 0.674513 | 7.3:-86944324 | MS.gene79557:CDS |
GAGCGATGAACAATCCAACT+GGG | 0.680706 | 7.3:-86945730 | MS.gene79557:intron |
ATATGAATAAGTGTGAACCA+TGG | 0.681966 | 7.3:-86946739 | MS.gene79557:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTATAAAATATAAATTTT+AGG | - | chr7.3:86945898-86945917 | MS.gene79557:CDS | 0.0% |
!!! | ATTATAAAATATAAATTTTA+GGG | - | chr7.3:86945899-86945918 | MS.gene79557:CDS | 0.0% |
!!! | TTAAAAAGTTACTTTTATTA+TGG | + | chr7.3:86945870-86945889 | None:intergenic | 10.0% |
!! | TAAATATTATATTAGTAGTC+TGG | - | chr7.3:86944502-86944521 | MS.gene79557:CDS | 15.0% |
!!! | ACTTATGTTATTTTTTAAAG+TGG | - | chr7.3:86945122-86945141 | MS.gene79557:intron | 15.0% |
!!! | AGTTTACTTTATTTAGAAAA+AGG | + | chr7.3:86945831-86945850 | None:intergenic | 15.0% |
!!! | GTGAATTTAATGTTTTTTAT+AGG | - | chr7.3:86944460-86944479 | MS.gene79557:CDS | 15.0% |
!!! | TTATGCTTTCTTATTTTTTT+TGG | - | chr7.3:86945211-86945230 | MS.gene79557:intron | 15.0% |
!!! | TTTTATAATTTGTTACTAAC+AGG | + | chr7.3:86945761-86945780 | None:intergenic | 15.0% |
!! | AAAAGAAGACTTAAATTATG+TGG | - | chr7.3:86944851-86944870 | MS.gene79557:intron | 20.0% |
!! | TAAAAAACATTAAATTCACC+TGG | + | chr7.3:86944459-86944478 | None:intergenic | 20.0% |
!! | TCAAAAAATGGAAATTGAAA+AGG | - | chr7.3:86944290-86944309 | MS.gene79557:CDS | 20.0% |
!!! | TTTAAAGTTGCTAAAAAAAG+AGG | - | chr7.3:86944598-86944617 | MS.gene79557:CDS | 20.0% |
! | AAAATGAATGGTTCAAAACT+TGG | - | chr7.3:86946457-86946476 | MS.gene79557:intron | 25.0% |
! | AAACACTATACAATGACATT+AGG | - | chr7.3:86944805-86944824 | MS.gene79557:intron | 25.0% |
! | AAAGACAAAGAGATTTACAA+GGG | - | chr7.3:86945359-86945378 | MS.gene79557:intron | 25.0% |
! | AAGAAAAAGAAGAAGAAAAG+TGG | - | chr7.3:86944929-86944948 | MS.gene79557:intron | 25.0% |
! | AATCATGGAAAGAAAATGAA+TGG | - | chr7.3:86946445-86946464 | MS.gene79557:intron | 25.0% |
! | AGATAACGACAATATATCTA+AGG | + | chr7.3:86945001-86945020 | None:intergenic | 25.0% |
! | TATATTGTCGTTATCTTTGA+TGG | - | chr7.3:86945005-86945024 | MS.gene79557:intron | 25.0% |
!!! | ATAAATTTTAGGGAAACTAC+TGG | - | chr7.3:86945909-86945928 | MS.gene79557:CDS | 25.0% |
!!! | CTTCATTTTTCATCTTAATG+TGG | + | chr7.3:86944784-86944803 | None:intergenic | 25.0% |
!!! | TTCAATTTCCATTTTTTGAC+TGG | + | chr7.3:86944289-86944308 | None:intergenic | 25.0% |
!!! | TTTTTTGGTTTATTCAGAGA+TGG | - | chr7.3:86945226-86945245 | MS.gene79557:intron | 25.0% |
AAATCAATACCTTGTCAAGA+AGG | - | chr7.3:86944362-86944381 | MS.gene79557:CDS | 30.0% | |
ACAAGGGAAATTCATTAACT+GGG | - | chr7.3:86945375-86945394 | MS.gene79557:intron | 30.0% | |
ACAGGTCTTTAGTAAATGTT+TGG | + | chr7.3:86945743-86945762 | None:intergenic | 30.0% | |
ACGTAATTCTATCAAACACA+TGG | + | chr7.3:86945636-86945655 | None:intergenic | 30.0% | |
ATATGAATAAGTGTGAACCA+TGG | - | chr7.3:86944427-86944446 | MS.gene79557:CDS | 30.0% | |
ATGATTTATACTCTGTCTAC+TGG | - | chr7.3:86945580-86945599 | MS.gene79557:intron | 30.0% | |
ATGTGGTGTATATTTGATTC+AGG | + | chr7.3:86944767-86944786 | None:intergenic | 30.0% | |
CAAAGACAAAGAGATTTACA+AGG | - | chr7.3:86945358-86945377 | MS.gene79557:intron | 30.0% | |
CAATATTATCATTCCATGTG+TGG | + | chr7.3:86945531-86945550 | None:intergenic | 30.0% | |
CTAAAATGGAAGAAACAGAA+TGG | - | chr7.3:86945249-86945268 | MS.gene79557:intron | 30.0% | |
GAATGTTTCCAGTCAAAAAA+TGG | - | chr7.3:86944278-86944297 | MS.gene79557:CDS | 30.0% | |
TACAAGGGAAATTCATTAAC+TGG | - | chr7.3:86945374-86945393 | MS.gene79557:intron | 30.0% | |
TATGAATAAGTGTGAACCAT+GGG | - | chr7.3:86944428-86944447 | MS.gene79557:CDS | 30.0% | |
TTATTCAGAGATGGCTAAAA+TGG | - | chr7.3:86945235-86945254 | MS.gene79557:intron | 30.0% | |
TTCATCCTCTTCAAAACAAA+TGG | - | chr7.3:86946675-86946694 | MS.gene79557:intron | 30.0% | |
TTTATAAGCTCTTCATCAGT+TGG | + | chr7.3:86944345-86944364 | None:intergenic | 30.0% | |
! | ATGTTGTCTTCTTGTGTTTT+TGG | + | chr7.3:86946622-86946641 | None:intergenic | 30.0% |
! | CAATTGTTGCTTCAGTTAAA+GGG | + | chr7.3:86946708-86946727 | None:intergenic | 30.0% |
! | TTTGGTTTCTCTGTTTGATT+TGG | + | chr7.3:86946604-86946623 | None:intergenic | 30.0% |
!! | TTTCTCTGTTTGATTTGGAT+TGG | + | chr7.3:86946599-86946618 | None:intergenic | 30.0% |
!!! | AAAACACTGGTTTTCTACAT+AGG | - | chr7.3:86945404-86945423 | MS.gene79557:intron | 30.0% |
!!! | AACATCCATTTGTTTTGAAG+AGG | + | chr7.3:86946683-86946702 | None:intergenic | 30.0% |
!!! | AACCTTTTTTGTAGAGTGAA+TGG | - | chr7.3:86946395-86946414 | MS.gene79557:intron | 30.0% |
!!! | AATGGTACTTTTTTTGTGTG+AGG | - | chr7.3:86945267-86945286 | MS.gene79557:intron | 30.0% |
!!! | ACCTTTTTTGTAGAGTGAAT+GGG | - | chr7.3:86946396-86946415 | MS.gene79557:intron | 30.0% |
!!! | ATGGTACTTTTTTTGTGTGA+GGG | - | chr7.3:86945268-86945287 | MS.gene79557:intron | 30.0% |
AAAAATACCCAACTGGTCAA+AGG | - | chr7.3:86945294-86945313 | MS.gene79557:intron | 35.0% | |
AACACATTATGATGTGTCAG+TGG | + | chr7.3:86945059-86945078 | None:intergenic | 35.0% | |
AACTGGGATGAAAAAAACAC+TGG | - | chr7.3:86945391-86945410 | MS.gene79557:intron | 35.0% | |
ACCCATTCACTCTACAAAAA+AGG | + | chr7.3:86946400-86946419 | None:intergenic | 35.0% | |
ATAGGTTGTGCTAAGGAAAA+AGG | + | chr7.3:86945508-86945527 | None:intergenic | 35.0% | |
ATGGAAATGACATGCTTCAA+AGG | - | chr7.3:86946839-86946858 | MS.gene79557:CDS | 35.0% | |
CCAGATCTAATCAATGACTT+TGG | + | chr7.3:86944720-86944739 | None:intergenic | 35.0% | |
CTGACACATCATAATGTGTT+AGG | - | chr7.3:86945059-86945078 | MS.gene79557:intron | 35.0% | |
CTTCTAGATCTACCAATGAA+GGG | + | chr7.3:86944912-86944931 | None:intergenic | 35.0% | |
GAAAGAAAAACACCCTTCAT+TGG | - | chr7.3:86944897-86944916 | MS.gene79557:intron | 35.0% | |
GATATCTCATCTGTGGTATA+TGG | - | chr7.3:86946820-86946839 | MS.gene79557:CDS | 35.0% | |
GGATTTGAAAAACTACGTGT+TGG | - | chr7.3:86944523-86944542 | MS.gene79557:CDS | 35.0% | |
GTAAATTTAACCACGTCTAG+TGG | + | chr7.3:86945104-86945123 | None:intergenic | 35.0% | |
TCTCCCAAAAGAAAACTCTT+GGG | + | chr7.3:86946782-86946801 | None:intergenic | 35.0% | |
TCTTCTAGATCTACCAATGA+AGG | + | chr7.3:86944913-86944932 | None:intergenic | 35.0% | |
TGAATGGTTCAAAACTTGGA+AGG | - | chr7.3:86946461-86946480 | MS.gene79557:intron | 35.0% | |
TTATCATTCCATGTGTGGAT+AGG | + | chr7.3:86945526-86945545 | None:intergenic | 35.0% | |
! | CCAAAGTCATTGATTAGATC+TGG | - | chr7.3:86944717-86944736 | MS.gene79557:CDS | 35.0% |
! | GCAATTGTTGCTTCAGTTAA+AGG | + | chr7.3:86946709-86946728 | None:intergenic | 35.0% |
! | TCTCCCAAGAGTTTTCTTTT+GGG | - | chr7.3:86946776-86946795 | MS.gene79557:CDS | 35.0% |
! | TTCTCCCAAGAGTTTTCTTT+TGG | - | chr7.3:86946775-86946794 | MS.gene79557:CDS | 35.0% |
AATTGAACGTCCATCTCTAG+AGG | + | chr7.3:86946494-86946513 | None:intergenic | 40.0% | |
AGGGACAAAAAATACCCAAC+TGG | - | chr7.3:86945287-86945306 | MS.gene79557:intron | 40.0% | |
CTCTCCCAAAAGAAAACTCT+TGG | + | chr7.3:86946783-86946802 | None:intergenic | 40.0% | |
CTTCTGTGCTATAGCTATTG+CGG | - | chr7.3:86944398-86944417 | MS.gene79557:CDS | 40.0% | |
GAAATGACATGCTTCAAAGG+TGG | - | chr7.3:86946842-86946861 | MS.gene79557:CDS | 40.0% | |
TGATGCTGATATCTCATCTG+TGG | - | chr7.3:86946813-86946832 | MS.gene79557:CDS | 40.0% | |
TGATTCCAACCAAACCTCAA+TGG | - | chr7.3:86946729-86946748 | MS.gene79557:CDS | 40.0% | |
TGGAAAGAATCGATAACCAG+CGG | + | chr7.3:86944325-86944344 | None:intergenic | 40.0% | |
TGTCATCAACCTTCTTGACA+AGG | + | chr7.3:86944374-86944393 | None:intergenic | 40.0% | |
! | AAGAAAAGTGGTGACGAGTA+GGG | - | chr7.3:86944941-86944960 | MS.gene79557:intron | 40.0% |
! | ATGCATGAATACCGATTGGA+GGG | - | chr7.3:86945461-86945480 | MS.gene79557:intron | 40.0% |
! | GTCTTTGAGAAGCGTAATCA+TGG | - | chr7.3:86946430-86946449 | MS.gene79557:intron | 40.0% |
AATTCACCTGGCAAATCCCA+TGG | + | chr7.3:86944447-86944466 | None:intergenic | 45.0% | |
AATTCCCGACCATTGAGGTT+TGG | + | chr7.3:86946741-86946760 | None:intergenic | 45.0% | |
ACCAACAGAGCTACTAATGC+TGG | - | chr7.3:86945317-86945336 | MS.gene79557:intron | 45.0% | |
AGAGTGAGTTACCCTCCAAT+CGG | + | chr7.3:86945475-86945494 | None:intergenic | 45.0% | |
CAGTTGGATTGTTCATCGCT+CGG | + | chr7.3:86945437-86945456 | None:intergenic | 45.0% | |
GAAAAGGTCAAATTTCCCGC+TGG | - | chr7.3:86944306-86944325 | MS.gene79557:CDS | 45.0% | |
GAGCGATGAACAATCCAACT+GGG | - | chr7.3:86945436-86945455 | MS.gene79557:intron | 45.0% | |
GGAAAGAATCGATAACCAGC+GGG | + | chr7.3:86944324-86944343 | None:intergenic | 45.0% | |
GGTCATGCATGAATACCGAT+TGG | - | chr7.3:86945457-86945476 | MS.gene79557:intron | 45.0% | |
GTATTCATGCATGACCCAGT+TGG | + | chr7.3:86945453-86945472 | None:intergenic | 45.0% | |
TAGCACAACCTATCCACACA+TGG | - | chr7.3:86945515-86945534 | MS.gene79557:intron | 45.0% | |
TCCAACCAAACCTCAATGGT+CGG | - | chr7.3:86946733-86946752 | MS.gene79557:CDS | 45.0% | |
TGACATGCTTCAAAGGTGGT+CGG | - | chr7.3:86946846-86946865 | MS.gene79557:CDS | 45.0% | |
TGATGAATTCCCGACCATTG+AGG | + | chr7.3:86946746-86946765 | None:intergenic | 45.0% | |
TGTGTGGATAGGTTGTGCTA+AGG | + | chr7.3:86945515-86945534 | None:intergenic | 45.0% | |
TGTTGGTCCTTTGACCAGTT+GGG | + | chr7.3:86945304-86945323 | None:intergenic | 45.0% | |
! | AGGTCTAACTCCTCTAGAGA+TGG | - | chr7.3:86946481-86946500 | MS.gene79557:intron | 45.0% |
! | CATGCATGAATACCGATTGG+AGG | - | chr7.3:86945460-86945479 | MS.gene79557:intron | 45.0% |
! | GAAGAAAAGTGGTGACGAGT+AGG | - | chr7.3:86944940-86944959 | MS.gene79557:intron | 45.0% |
! | GAGCTACTAATGCTGGCTAT+TGG | - | chr7.3:86945324-86945343 | MS.gene79557:intron | 45.0% |
ACATGCTTCAAAGGTGGTCG+GGG | - | chr7.3:86946848-86946867 | MS.gene79557:CDS | 50.0% | |
CAACATGACACCACTAGACG+TGG | - | chr7.3:86945091-86945110 | MS.gene79557:intron | 50.0% | |
CCAACCAAACCTCAATGGTC+GGG | - | chr7.3:86946734-86946753 | MS.gene79557:CDS | 50.0% | |
CGAGCGATGAACAATCCAAC+TGG | - | chr7.3:86945435-86945454 | MS.gene79557:intron | 50.0% | |
CTGTTGGTCCTTTGACCAGT+TGG | + | chr7.3:86945305-86945324 | None:intergenic | 50.0% | |
GACATGCTTCAAAGGTGGTC+GGG | - | chr7.3:86946847-86946866 | MS.gene79557:CDS | 50.0% | |
TGTGAACCATGGGATTTGCC+AGG | - | chr7.3:86944438-86944457 | MS.gene79557:CDS | 50.0% | |
TTGGCGAGGAGAAAAGTGAG+TGG | - | chr7.3:86944965-86944984 | MS.gene79557:intron | 50.0% | |
! | AAGTGGTGACGAGTAGGGTT+TGG | - | chr7.3:86944946-86944965 | MS.gene79557:intron | 50.0% |
! | GCCAGCATTAGTAGCTCTGT+TGG | + | chr7.3:86945321-86945340 | None:intergenic | 50.0% |
!! | CACGTCTAGTGGTGTCATGT+TGG | + | chr7.3:86945093-86945112 | None:intergenic | 50.0% |
GCTGCAAGTCGAGTAGAAGC+TGG | + | chr7.3:86946889-86946908 | None:intergenic | 55.0% | |
! | CCCGACCATTGAGGTTTGGT+TGG | + | chr7.3:86946737-86946756 | None:intergenic | 55.0% |
GTGACGAGTAGGGTTTGGCG+AGG | - | chr7.3:86944951-86944970 | MS.gene79557:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 86944264 | 86946924 | 86944264 | ID=MS.gene79557 |
chr7.3 | mRNA | 86944264 | 86946924 | 86944264 | ID=MS.gene79557.t1;Parent=MS.gene79557 |
chr7.3 | exon | 86946729 | 86946924 | 86946729 | ID=MS.gene79557.t1.exon1;Parent=MS.gene79557.t1 |
chr7.3 | CDS | 86946729 | 86946924 | 86946729 | ID=cds.MS.gene79557.t1;Parent=MS.gene79557.t1 |
chr7.3 | exon | 86945731 | 86945945 | 86945731 | ID=MS.gene79557.t1.exon2;Parent=MS.gene79557.t1 |
chr7.3 | CDS | 86945731 | 86945945 | 86945731 | ID=cds.MS.gene79557.t1;Parent=MS.gene79557.t1 |
chr7.3 | exon | 86944264 | 86944779 | 86944264 | ID=MS.gene79557.t1.exon3;Parent=MS.gene79557.t1 |
chr7.3 | CDS | 86944264 | 86944779 | 86944264 | ID=cds.MS.gene79557.t1;Parent=MS.gene79557.t1 |
Gene Sequence |
Protein sequence |