AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene79560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79560.t1 MTR_7g011130 85.227 352 45 2 1 345 1 352 0.0 602
MS.gene79560.t1 MTR_7g011120 80.597 335 39 4 12 345 1 310 0.0 534
MS.gene79560.t1 MTR_3g070030 71.274 369 65 4 1 345 1 352 0.0 510
MS.gene79560.t1 MTR_3g070040 69.577 355 67 6 12 345 1 335 1.99e-166 467
MS.gene79560.t1 MTR_6g012670 53.754 333 121 8 1 329 2 305 5.75e-105 311
MS.gene79560.t1 MTR_3g435150 50.000 298 122 6 5 292 2 282 2.38e-84 258
MS.gene79560.t1 MTR_4g108760 57.563 238 76 4 13 235 11 238 1.32e-83 258
MS.gene79560.t1 MTR_2g078700 56.422 218 69 3 19 217 23 233 1.09e-76 241
MS.gene79560.t1 MTR_7g085260 55.909 220 83 6 5 219 3 213 1.66e-72 230
MS.gene79560.t1 MTR_6g032770 55.093 216 80 6 14 225 13 215 5.76e-71 226
MS.gene79560.t1 MTR_6g084430 58.152 184 66 2 19 202 5 177 1.34e-69 220
MS.gene79560.t1 MTR_3g116070 44.863 292 116 9 7 283 12 273 3.36e-65 210
MS.gene79560.t1 MTR_1g008740 59.064 171 57 3 19 186 13 173 5.72e-64 207
MS.gene79560.t1 MTR_3g109340 59.036 166 56 2 19 182 22 177 5.82e-64 207
MS.gene79560.t1 MTR_1g008740 59.064 171 57 3 19 186 27 187 7.71e-64 207
MS.gene79560.t1 MTR_3g109340 45.489 266 119 7 19 279 22 266 3.11e-63 205
MS.gene79560.t1 MTR_8g059170 51.497 167 74 1 16 182 11 170 4.68e-55 183
MS.gene79560.t1 MTR_5g012080 47.619 210 88 6 20 221 8 203 2.04e-54 182
MS.gene79560.t1 MTR_2g064470 55.556 162 60 4 16 176 8 158 4.31e-54 180
MS.gene79560.t1 MTR_8g024480 51.136 176 79 3 14 184 10 183 9.47e-54 182
MS.gene79560.t1 MTR_4g101680 53.049 164 57 3 20 177 8 157 3.27e-53 179
MS.gene79560.t1 MTR_4g035590 56.442 163 54 3 20 178 9 158 6.28e-53 178
MS.gene79560.t1 MTR_4g036030 52.795 161 62 3 20 177 8 157 1.01e-52 177
MS.gene79560.t1 MTR_1g069805 48.837 172 70 4 19 188 10 165 4.65e-52 174
MS.gene79560.t1 MTR_2g062730 50.588 170 69 3 16 181 7 165 4.96e-52 176
MS.gene79560.t1 MTR_2g079990 49.102 167 76 1 16 182 13 170 1.55e-51 174
MS.gene79560.t1 MTR_8g094580 50.289 173 76 4 17 187 5 169 1.70e-51 172
MS.gene79560.t1 MTR_5g041940 47.619 168 83 1 17 184 1 163 4.76e-51 171
MS.gene79560.t1 MTR_5g021710 44.118 204 97 4 12 209 1 193 7.75e-51 173
MS.gene79560.t1 MTR_4g081870 47.590 166 82 1 18 183 8 168 2.66e-50 169
MS.gene79560.t1 MTR_7g097090 39.600 250 125 6 19 266 10 235 4.47e-50 169
MS.gene79560.t1 MTR_3g088110 47.929 169 77 3 16 182 4 163 7.17e-50 168
MS.gene79560.t1 MTR_8g076110 50.307 163 67 3 20 179 7 158 7.45e-50 169
MS.gene79560.t1 MTR_3g093040 50.617 162 69 2 17 176 106 258 1.42e-49 168
MS.gene79560.t1 MTR_2157s0010 40.496 242 122 5 12 236 1 237 3.07e-49 166
MS.gene79560.t1 MTR_3g093050 52.500 160 65 2 19 176 22 172 4.46e-49 173
MS.gene79560.t1 MTR_7g100990 49.711 173 80 3 11 181 3 170 5.39e-49 167
MS.gene79560.t1 MTR_3g096920 48.538 171 81 3 16 186 4 167 5.99e-49 166
MS.gene79560.t1 MTR_2g079990 44.624 186 84 2 16 182 13 198 6.30e-49 169
MS.gene79560.t1 MTR_3g093050 52.500 160 65 2 19 176 22 172 7.28e-49 173
MS.gene79560.t1 MTR_2g080010 47.399 173 83 3 15 181 11 181 1.00e-48 167
MS.gene79560.t1 MTR_5g069030 37.319 276 138 7 18 271 24 286 1.05e-48 173
MS.gene79560.t1 MTR_4g089135 47.458 177 77 4 19 179 15 191 1.16e-48 167
MS.gene79560.t1 MTR_1g096430 49.080 163 63 3 20 176 8 156 1.40e-48 166
MS.gene79560.t1 MTR_2g064090 56.429 140 55 2 17 150 4 143 3.63e-48 166
MS.gene79560.t1 MTR_6g477900 50.617 162 69 2 17 176 4 156 8.67e-48 161
MS.gene79560.t1 MTR_7g085220 47.701 174 77 2 12 176 1 169 1.30e-47 164
MS.gene79560.t1 MTR_5g076850 41.096 219 108 3 17 223 4 213 3.27e-47 169
MS.gene79560.t1 MTR_7g005280 49.425 174 68 5 13 182 9 166 6.94e-47 159
MS.gene79560.t1 MTR_3g064580 49.383 162 72 2 17 176 4 157 4.94e-46 166
MS.gene79560.t1 MTR_3g096920 56.589 129 55 1 16 144 4 131 1.01e-45 159
MS.gene79560.t1 MTR_8g467490 46.746 169 83 4 15 179 11 176 1.07e-45 160
MS.gene79560.t1 MTR_6g011860 48.765 162 76 4 22 179 18 176 3.71e-45 159
MS.gene79560.t1 MTR_2g093810 48.171 164 75 3 19 180 14 169 4.18e-45 157
MS.gene79560.t1 MTR_1g090723 43.000 200 100 4 22 218 11 199 4.99e-45 162
MS.gene79560.t1 MTR_1g090723 43.367 196 97 4 22 214 11 195 7.17e-45 162
MS.gene79560.t1 MTR_0036s0150 48.538 171 74 4 22 189 8 167 7.74e-45 161
MS.gene79560.t1 MTR_8g063550 39.801 201 103 4 18 210 5 195 8.81e-45 157
MS.gene79560.t1 MTR_1g090723 43.000 200 101 4 22 218 11 200 1.31e-44 162
MS.gene79560.t1 MTR_5g040420 48.521 169 79 5 15 179 11 175 1.36e-44 157
MS.gene79560.t1 MTR_8g063550 39.801 201 103 4 18 210 5 195 3.32e-44 157
MS.gene79560.t1 MTR_3g096140 42.781 187 94 5 12 196 1 176 3.72e-44 153
MS.gene79560.t1 MTR_8g063550 39.801 201 103 4 18 210 5 195 5.60e-44 157
MS.gene79560.t1 MTR_3g096140 42.781 187 94 5 12 196 1 176 2.07e-43 153
MS.gene79560.t1 MTR_4g098630 43.243 185 91 4 15 194 2 177 7.11e-43 151
MS.gene79560.t1 MTR_5g014300 53.333 135 54 2 19 144 6 140 7.66e-43 151
MS.gene79560.t1 MTR_8g093580 36.929 241 126 6 18 246 5 231 1.67e-42 154
MS.gene79560.t1 MTR_1g097300 45.294 170 81 3 22 189 22 181 1.28e-41 153
MS.gene79560.t1 MTR_2g068920 42.708 192 99 7 1 182 1 191 1.34e-41 147
MS.gene79560.t1 MTR_2g068880 43.979 191 96 6 1 181 1 190 1.47e-41 147
MS.gene79560.t1 MTR_5g090970 43.503 177 95 3 9 182 10 184 3.26e-41 146
MS.gene79560.t1 MTR_2g086880 53.600 125 56 2 19 142 19 142 3.73e-41 150
MS.gene79560.t1 MTR_2g086880 53.600 125 56 2 19 142 19 142 4.18e-41 152
MS.gene79560.t1 MTR_4g134460 45.513 156 73 2 22 176 57 201 2.97e-40 147
MS.gene79560.t1 MTR_5g090970 43.503 177 94 4 9 182 10 183 2.16e-39 142
MS.gene79560.t1 MTR_3g096140 42.945 163 81 4 36 196 3 155 6.58e-38 138
MS.gene79560.t1 MTR_1g090720 48.447 161 78 2 22 180 45 202 7.37e-38 141
MS.gene79560.t1 MTR_8g023840 55.814 129 51 5 20 143 12 139 6.67e-37 137
MS.gene79560.t1 MTR_4g075980 45.695 151 75 3 1 148 1 147 1.50e-35 131
MS.gene79560.t1 MTR_8g023860 53.488 129 54 5 20 143 13 140 3.50e-35 133
MS.gene79560.t1 MTR_8g094580 53.659 123 47 4 67 187 1 115 3.60e-34 125
MS.gene79560.t1 MTR_8g099750 39.773 176 88 4 12 180 7 171 4.70e-34 125
MS.gene79560.t1 MTR_3g098810 38.953 172 96 3 12 179 7 173 5.73e-34 125
MS.gene79560.t1 MTR_2g064730 81.579 76 13 1 220 294 6 81 9.25e-34 120
MS.gene79560.t1 MTR_3g098810 43.066 137 72 2 12 144 7 141 4.16e-31 116
MS.gene79560.t1 MTR_2g086690 46.565 131 63 4 20 143 5 135 7.83e-31 117
MS.gene79560.t1 MTR_4g052620 45.038 131 66 3 19 143 5 135 5.15e-30 115
MS.gene79560.t1 MTR_8g023930 37.615 218 98 10 19 229 24 210 1.23e-28 115
MS.gene79560.t1 MTR_8g023900 46.923 130 63 4 19 143 12 140 2.36e-28 115
MS.gene79560.t1 MTR_8g023900 38.798 183 88 8 21 195 195 361 4.79e-28 114
MS.gene79560.t1 MTR_8g023880 45.833 144 56 7 19 143 7 147 2.26e-26 106
MS.gene79560.t1 MTR_7g105170 37.356 174 96 6 19 184 4 172 3.46e-26 105
MS.gene79560.t1 MTR_4g094302 33.140 172 102 3 19 188 11 171 6.13e-25 100
MS.gene79560.t1 MTR_4g094302 37.500 128 70 2 19 144 11 130 3.83e-23 94.4
MS.gene79560.t1 MTR_7g070140 54.667 75 32 1 72 144 17 91 9.63e-23 92.8
MS.gene79560.t1 MTR_8g093790 37.126 167 73 7 17 183 8 142 2.52e-19 84.7
MS.gene79560.t1 MTR_3g096400 30.612 196 115 5 15 201 3 186 2.83e-18 82.4
MS.gene79560.t1 MTR_7g083360 31.818 154 92 6 12 155 3 153 1.62e-17 79.0
MS.gene79560.t1 MTR_7g083330 34.109 129 79 5 17 142 16 141 1.66e-14 71.6
MS.gene79560.t1 MTR_4g078875 32.168 143 79 4 19 144 48 189 1.21e-13 70.9
MS.gene79560.t1 MTR_8g069160 30.864 162 95 4 2 147 51 211 1.85e-12 67.0
MS.gene79560.t1 MTR_4g088245 30.864 162 95 4 2 147 51 211 2.77e-12 67.0
MS.gene79560.t1 MTR_7g083370 30.370 135 88 4 19 150 10 141 1.44e-11 62.0
MS.gene79560.t1 MTR_7g070150 39.474 76 34 1 111 186 4 67 8.57e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79560.t1 AT5G61430 48.235 340 132 10 13 323 10 334 1.40e-88 270
MS.gene79560.t1 AT5G07680 53.558 267 96 6 10 264 8 258 1.32e-84 259
MS.gene79560.t1 AT5G07680 54.651 258 89 6 19 264 3 244 1.89e-83 256
MS.gene79560.t1 AT3G29035 51.751 257 98 5 3 258 8 239 1.11e-78 244
MS.gene79560.t1 AT5G39610 65.341 176 54 1 13 188 14 182 1.54e-75 234
MS.gene79560.t1 AT5G18270 55.340 206 78 3 15 213 17 215 9.67e-72 226
MS.gene79560.t1 AT5G18270 55.340 206 78 3 15 213 17 215 1.16e-71 226
MS.gene79560.t1 AT3G04060 55.556 207 83 3 7 211 8 207 1.24e-71 226
MS.gene79560.t1 AT5G53950 65.625 160 46 2 19 176 17 169 2.15e-69 221
MS.gene79560.t1 AT3G18400 61.585 164 53 1 19 182 5 158 1.46e-68 218
MS.gene79560.t1 AT2G24430 57.778 180 64 2 5 182 2 171 4.10e-66 211
MS.gene79560.t1 AT2G24430 57.778 180 64 2 5 182 2 171 4.10e-66 211
MS.gene79560.t1 AT3G15170 61.905 168 54 3 11 176 13 172 2.55e-65 209
MS.gene79560.t1 AT5G61430 45.804 286 111 10 67 323 1 271 1.64e-63 203
MS.gene79560.t1 AT1G76420 60.625 160 51 2 19 176 22 171 3.74e-63 204
MS.gene79560.t1 AT1G56010 44.541 229 111 6 1 228 1 214 2.91e-58 191
MS.gene79560.t1 AT3G12977 49.398 166 76 1 19 184 18 175 7.40e-57 186
MS.gene79560.t1 AT2G46770 48.663 187 89 2 14 193 11 197 9.95e-55 183
MS.gene79560.t1 AT4G10350 56.790 162 58 3 20 178 10 162 6.45e-54 181
MS.gene79560.t1 AT1G12260 52.071 169 67 3 20 185 8 165 5.75e-53 178
MS.gene79560.t1 AT1G12260 52.071 169 67 3 20 185 8 165 8.13e-53 179
MS.gene79560.t1 AT4G27410 45.098 204 95 4 16 214 11 202 3.65e-52 174
MS.gene79560.t1 AT1G33280 47.761 201 82 4 20 217 9 189 7.49e-52 174
MS.gene79560.t1 AT3G15500 47.904 167 78 1 16 182 11 168 9.56e-52 174
MS.gene79560.t1 AT1G62700 52.761 163 63 3 18 177 6 157 1.17e-51 176
MS.gene79560.t1 AT1G62700 52.761 163 63 3 18 177 6 157 1.17e-51 176
MS.gene79560.t1 AT1G52890 48.503 167 77 1 16 182 11 168 1.60e-51 174
MS.gene79560.t1 AT2G18060 49.412 170 72 3 15 181 5 163 1.94e-51 175
MS.gene79560.t1 AT2G18060 49.412 170 72 3 15 181 5 163 1.94e-51 175
MS.gene79560.t1 AT4G35580 49.721 179 76 3 19 192 9 178 2.70e-51 178
MS.gene79560.t1 AT4G35580 49.721 179 76 3 19 192 9 178 3.16e-51 178
MS.gene79560.t1 AT4G35580 49.721 179 76 3 19 192 9 178 3.45e-51 178
MS.gene79560.t1 AT1G32770 47.594 187 94 2 14 196 11 197 5.48e-51 173
MS.gene79560.t1 AT3G61910 48.889 180 85 3 14 186 6 185 6.19e-51 172
MS.gene79560.t1 AT5G08790 50.299 167 78 3 16 182 4 165 9.10e-51 171
MS.gene79560.t1 AT5G66300 50.610 164 68 3 19 179 12 165 4.01e-50 169
MS.gene79560.t1 AT1G33060 51.875 160 66 2 19 176 24 174 4.26e-50 177
MS.gene79560.t1 AT4G36160 49.701 167 70 3 14 177 5 160 4.46e-50 171
MS.gene79560.t1 AT4G36160 49.701 167 70 3 14 177 5 160 4.46e-50 171
MS.gene79560.t1 AT1G33060 51.875 160 66 2 19 176 24 174 4.90e-50 177
MS.gene79560.t1 AT4G36160 49.701 167 70 3 14 177 9 164 5.74e-50 171
MS.gene79560.t1 AT1G61110 46.409 181 93 2 5 181 2 182 6.46e-50 169
MS.gene79560.t1 AT1G77450 40.708 226 105 5 17 235 8 211 9.00e-50 167
MS.gene79560.t1 AT3G04070 50.857 175 73 4 13 179 4 173 1.67e-49 169
MS.gene79560.t1 AT5G62380 46.995 183 77 4 17 190 5 176 1.74e-49 169
MS.gene79560.t1 AT5G62380 46.995 183 77 4 17 190 5 176 1.74e-49 169
MS.gene79560.t1 AT5G63790 50.000 172 80 4 11 182 43 208 2.45e-49 168
MS.gene79560.t1 AT5G63790 50.000 172 80 4 11 182 53 218 3.04e-49 168
MS.gene79560.t1 AT1G01720 46.746 169 84 2 14 182 2 164 3.40e-49 167
MS.gene79560.t1 AT1G71930 48.447 161 69 3 19 176 9 158 6.51e-49 167
MS.gene79560.t1 AT1G71930 48.447 161 69 3 19 176 9 158 6.51e-49 167
MS.gene79560.t1 AT4G28530 40.708 226 98 6 18 220 9 221 7.54e-48 165
MS.gene79560.t1 AT1G69490 48.795 166 80 2 19 184 9 169 8.35e-48 162
MS.gene79560.t1 AT4G27410 41.629 221 95 5 16 214 11 219 9.35e-48 164
MS.gene79560.t1 AT1G79580 50.299 167 67 4 16 178 14 168 9.44e-48 165
MS.gene79560.t1 AT1G79580 50.299 167 67 4 16 178 14 168 9.44e-48 165
MS.gene79560.t1 AT1G79580 50.299 167 67 4 16 178 14 168 9.44e-48 165
MS.gene79560.t1 AT1G79580 50.299 167 67 4 16 178 14 168 9.44e-48 165
MS.gene79560.t1 AT1G79580 50.299 167 67 4 16 178 14 168 9.44e-48 165
MS.gene79560.t1 AT3G03200 52.147 163 66 3 17 176 4 157 9.50e-48 168
MS.gene79560.t1 AT3G04070 46.524 187 79 4 13 179 4 189 1.18e-47 165
MS.gene79560.t1 AT3G17730 49.383 162 71 2 17 176 4 156 3.78e-47 160
MS.gene79560.t1 AT3G49530 49.689 161 69 3 19 176 13 164 3.98e-47 164
MS.gene79560.t1 AT1G26870 46.961 181 91 3 1 179 1 178 8.29e-47 164
MS.gene79560.t1 AT1G65910 46.591 176 81 3 17 189 4 169 9.77e-47 167
MS.gene79560.t1 AT5G39820 44.624 186 88 3 8 179 10 194 1.08e-46 161
MS.gene79560.t1 AT3G49530 47.159 176 77 4 4 176 2 164 1.35e-46 164
MS.gene79560.t1 AT5G17260 50.920 163 68 3 17 176 4 157 1.52e-46 164
MS.gene79560.t1 AT5G04410 49.693 163 71 2 22 182 12 165 1.96e-46 166
MS.gene79560.t1 AT3G15510 46.746 169 82 3 25 187 23 189 2.18e-46 161
MS.gene79560.t1 AT3G10500 48.466 163 73 2 22 182 12 165 3.79e-46 165
MS.gene79560.t1 AT2G27300 55.039 129 56 2 19 146 15 142 4.04e-46 160
MS.gene79560.t1 AT1G54330 49.123 171 73 2 17 185 4 162 9.63e-46 158
MS.gene79560.t1 AT5G13180 46.243 173 78 4 12 182 7 166 1.54e-45 156
MS.gene79560.t1 AT3G10480 52.147 163 63 3 22 180 30 181 1.71e-45 161
MS.gene79560.t1 AT2G33480 49.390 164 67 3 17 179 13 161 2.77e-45 156
MS.gene79560.t1 AT3G10490 52.174 161 67 3 22 180 30 182 4.74e-45 154
MS.gene79560.t1 AT2G33480 48.795 166 67 3 17 179 13 163 6.02e-45 155
MS.gene79560.t1 AT3G10480 51.829 164 63 3 22 180 30 182 6.75e-45 159
MS.gene79560.t1 AT5G24590 47.239 163 74 3 19 178 13 166 1.80e-44 158
MS.gene79560.t1 AT3G10490 52.174 161 67 3 22 180 30 182 6.05e-44 157
MS.gene79560.t1 AT5G46590 52.206 136 62 2 19 151 6 141 2.13e-43 151
MS.gene79560.t1 AT5G46590 52.206 136 62 2 19 151 6 141 3.65e-43 151
MS.gene79560.t1 AT2G43000 39.227 181 101 2 1 181 1 172 1.09e-42 149
MS.gene79560.t1 AT2G02450 44.571 175 82 3 22 195 54 214 7.90e-42 150
MS.gene79560.t1 AT2G02450 45.143 175 81 4 22 195 54 214 8.21e-42 150
MS.gene79560.t1 AT1G52880 48.428 159 77 2 25 179 23 180 1.43e-41 147
MS.gene79560.t1 AT5G22290 50.000 132 64 2 19 149 22 152 2.52e-41 147
MS.gene79560.t1 AT5G09330 40.341 176 93 3 16 189 3 168 3.13e-41 150
MS.gene79560.t1 AT5G09330 40.341 176 93 3 16 189 3 168 3.13e-41 150
MS.gene79560.t1 AT5G09330 40.341 176 93 3 16 189 3 168 3.13e-41 150
MS.gene79560.t1 AT5G09330 40.341 176 93 3 16 189 3 168 3.13e-41 150
MS.gene79560.t1 AT5G09330 40.341 176 93 3 16 189 3 168 3.13e-41 150
MS.gene79560.t1 AT4G17980 53.077 130 57 2 19 144 6 135 1.71e-40 143
MS.gene79560.t1 AT3G44290 50.758 132 63 2 19 149 15 145 2.26e-40 142
MS.gene79560.t1 AT4G17980 53.077 130 57 2 19 144 6 135 3.31e-40 143
MS.gene79560.t1 AT5G64060 40.909 176 92 4 16 189 3 168 6.61e-40 144
MS.gene79560.t1 AT3G44290 50.758 132 63 2 19 149 15 145 1.89e-39 142
MS.gene79560.t1 AT3G10480 43.655 197 62 3 22 180 30 215 2.68e-39 146
MS.gene79560.t1 AT1G56010 48.765 162 68 5 67 228 1 147 7.81e-39 139
MS.gene79560.t1 AT1G32510 48.276 145 66 2 19 154 6 150 8.85e-39 139
MS.gene79560.t1 AT3G12977 53.782 119 47 1 66 184 12 122 1.56e-38 137
MS.gene79560.t1 AT1G34190 42.941 170 85 3 22 189 19 178 1.55e-37 141
MS.gene79560.t1 AT1G34180 42.353 170 86 3 22 189 19 178 1.83e-37 139
MS.gene79560.t1 AT1G34180 42.353 170 86 3 22 189 19 178 6.79e-37 140
MS.gene79560.t1 AT4G10350 57.627 118 38 3 64 178 7 115 7.26e-36 132
MS.gene79560.t1 AT1G34180 39.560 182 86 3 22 189 19 190 1.13e-35 135
MS.gene79560.t1 AT3G12910 33.955 268 127 10 13 237 16 276 2.27e-35 131
MS.gene79560.t1 AT1G34180 39.560 182 86 3 22 189 19 190 3.50e-35 135
MS.gene79560.t1 AT2G17040 46.269 134 68 2 17 147 5 137 5.88e-35 129
MS.gene79560.t1 AT1G32870 44.785 163 79 3 22 182 13 166 1.75e-33 130
MS.gene79560.t1 AT1G32870 44.785 163 79 3 22 182 13 166 1.85e-33 130
MS.gene79560.t1 AT1G32870 44.785 163 79 3 22 182 49 202 2.57e-33 130
MS.gene79560.t1 AT5G04395 44.138 145 65 2 19 147 28 172 4.08e-30 114
MS.gene79560.t1 AT2G33480 51.351 111 39 2 72 179 8 106 2.18e-29 112
MS.gene79560.t1 AT4G01550 44.776 134 68 4 17 144 2 135 2.46e-27 112
MS.gene79560.t1 AT4G28530 46.296 108 42 1 18 109 9 116 4.65e-27 108
MS.gene79560.t1 AT5G22380 42.308 130 66 5 21 142 7 135 2.03e-25 102
MS.gene79560.t1 AT1G02230 45.385 130 61 6 20 142 4 130 1.69e-24 102
MS.gene79560.t1 AT3G04420 40.157 127 72 2 20 142 4 130 2.17e-24 101
MS.gene79560.t1 AT3G44350 36.628 172 91 7 21 184 7 168 3.43e-24 99.8
MS.gene79560.t1 AT4G01520 40.000 135 74 5 17 144 2 136 3.90e-24 100
MS.gene79560.t1 AT3G44350 40.876 137 74 5 21 150 7 143 4.09e-24 97.1
MS.gene79560.t1 AT3G04420 40.157 127 72 2 20 142 4 130 5.04e-24 101
MS.gene79560.t1 AT4G01540 41.221 131 70 5 21 144 6 136 1.15e-23 100
MS.gene79560.t1 AT4G01540 41.221 131 70 5 21 144 6 136 2.29e-23 100
MS.gene79560.t1 AT3G10490 58.427 89 29 2 92 180 2 82 2.60e-23 99.4
MS.gene79560.t1 AT3G10490 58.427 89 29 2 92 180 2 82 2.60e-23 99.4
MS.gene79560.t1 AT4G01540 41.221 131 70 5 21 144 6 136 2.65e-23 100
MS.gene79560.t1 AT4G01540 41.221 131 70 5 21 144 6 136 2.74e-23 100
MS.gene79560.t1 AT2G18060 51.765 85 30 2 97 181 2 75 7.73e-22 94.0
MS.gene79560.t1 AT1G01010 36.842 152 70 6 21 158 5 144 5.61e-21 93.6
MS.gene79560.t1 AT1G02220 37.795 127 72 3 20 142 4 127 3.32e-20 91.3
MS.gene79560.t1 AT5G64530 32.584 178 100 5 19 188 3 168 4.62e-20 87.0
MS.gene79560.t1 AT1G02250 38.168 131 71 4 20 143 4 131 5.82e-20 90.1
MS.gene79560.t1 AT5G64530 35.938 128 68 3 19 144 3 118 8.60e-20 85.5
MS.gene79560.t1 AT2G43000 38.235 102 55 1 80 181 1 94 1.39e-18 83.2
MS.gene79560.t1 AT5G22290 61.538 52 20 0 98 149 2 53 7.92e-18 82.0
MS.gene79560.t1 AT5G14000 29.570 186 114 4 7 189 3 174 1.89e-17 80.1
MS.gene79560.t1 AT3G56530 32.090 134 88 2 15 145 48 181 8.35e-17 80.5
MS.gene79560.t1 AT5G14000 32.394 142 92 2 7 146 3 142 2.42e-16 75.9
MS.gene79560.t1 AT5G50820 28.495 186 112 7 6 183 2 174 1.67e-15 74.3
MS.gene79560.t1 AT3G55210 31.250 144 85 3 19 148 11 154 7.59e-15 74.3
MS.gene79560.t1 AT3G04430 36.364 132 70 4 25 143 6 136 1.40e-14 72.0
MS.gene79560.t1 AT4G28500 33.333 144 76 5 19 144 59 200 5.72e-12 66.2
MS.gene79560.t1 AT1G28470 30.814 172 89 7 19 174 77 234 9.27e-12 65.5

Find 76 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAGGGAAATTCATTAAT+TGG 0.105364 7.3:-86979905 MS.gene79560:CDS
GCAATTGTTGCTTCAGTTAA+AGG 0.182371 7.3:+86978896 None:intergenic
TTATTTAGAGATGGCTAAAA+TGG 0.245081 7.3:-86980044 MS.gene79560:intron
GATATCTCATCTGTGGTATA+TGG 0.270105 7.3:-86978782 MS.gene79560:CDS
GTCTTTGAGAAGCGTAATTC+TGG 0.272593 7.3:-86979190 MS.gene79560:CDS
GCGTAATTCTGGAAAGAAAA+TGG 0.300404 7.3:-86979179 MS.gene79560:CDS
GGTCAAATTTCCTGTTGGTT+GGG 0.351990 7.3:-86981042 MS.gene79560:CDS
AGAAATCAGAAATAGTGTTT+TGG 0.360052 7.3:+86979050 None:intergenic
ACAAGGGAAATTCATTAATT+GGG 0.364746 7.3:-86979904 MS.gene79560:CDS
TTCTTACTCTTCAAAACAAA+TGG 0.367873 7.3:-86978927 MS.gene79560:CDS
CTCTCCCAAAAGAAAACTCT+TGG 0.386693 7.3:+86978822 None:intergenic
TTTCTCTGTTTGATTTGGAT+TGG 0.387625 7.3:+86979006 None:intergenic
GAGCTACTAATGCTGGCTAT+TGG 0.387868 7.3:-86979955 MS.gene79560:CDS
GCCAGCATTAGTAGCTCTAT+TGG 0.388516 7.3:+86979961 None:intergenic
GACATGTTTCAAAGGTGGTC+TGG 0.388609 7.3:-86978755 MS.gene79560:CDS
ATCTCTATTGACTCCATTGT+TGG 0.389102 7.3:-86979098 MS.gene79560:CDS
AAAATTGCAAAAGCTATCAT+TGG 0.406117 7.3:+86978694 None:intergenic
CAATTGTTGCTTCAGTTAAA+GGG 0.406411 7.3:+86978897 None:intergenic
ATAGGTTGTGCTCAGGAAAA+AGG 0.408448 7.3:+86979774 None:intergenic
GCTGGCTATTGGAAAGCAAC+GGG 0.412908 7.3:-86979944 MS.gene79560:CDS
TATTGGTCCTTTGACCAGTT+GGG 0.417126 7.3:+86979978 None:intergenic
AAATCAATACCTTGTTAAGA+AGG 0.419367 7.3:-86980991 MS.gene79560:CDS
GTCAAATTTCCTGTTGGTTG+GGG 0.422199 7.3:-86981041 MS.gene79560:CDS
AATTCCCAACCATTGAGGTT+TGG 0.426834 7.3:+86978864 None:intergenic
TTTATAAGCTCTTCATCGGT+TGG 0.438123 7.3:+86981011 None:intergenic
CTATTGGTCCTTTGACCAGT+TGG 0.441493 7.3:+86979977 None:intergenic
CCCAACCATTGAGGTTTGGT+TGG 0.448345 7.3:+86978868 None:intergenic
ACACAAGATGACAACATTGT+TGG 0.449185 7.3:-86978977 MS.gene79560:CDS
AAAATGGATGGTTCAAAACT+TGG 0.449715 7.3:-86979163 MS.gene79560:CDS
ATATCTCATCTGTGGTATAT+GGG 0.452271 7.3:-86978781 MS.gene79560:CDS
ACATGTTTCAAAGGTGGTCT+GGG 0.461659 7.3:-86978754 MS.gene79560:CDS
GGAAAGAATCCCCAACCAAC+AGG 0.474042 7.3:+86981032 None:intergenic
AGGTCAAATTTCCTGTTGGT+TGG 0.481996 7.3:-86981043 MS.gene79560:CDS
TATTTAGAGATGGCTAAAAT+GGG 0.486414 7.3:-86980043 MS.gene79560:intron
TCCAACCAAACCTCAATGGT+TGG 0.493846 7.3:-86978869 MS.gene79560:CDS
ACCAATAGAGCTACTAATGC+TGG 0.495849 7.3:-86979962 MS.gene79560:CDS
TTGATTTATAAGCTCTTCAT+CGG 0.497039 7.3:+86981007 None:intergenic
TGATTCCAACCAAACCTCAA+TGG 0.511403 7.3:-86978873 MS.gene79560:CDS
CCAACCAAACCTCAATGGTT+GGG 0.511689 7.3:-86978868 MS.gene79560:CDS
ACCAGCTTCTACTGGACTTG+CGG 0.519196 7.3:-86978717 MS.gene79560:CDS
TCTCCCAAAAGAAAACTCTT+GGG 0.526665 7.3:+86978823 None:intergenic
TTACCATTCCATGCGTGGAT+AGG 0.529914 7.3:+86979756 None:intergenic
GAAAAGGTCAAATTTCCTGT+TGG 0.532681 7.3:-86981047 MS.gene79560:CDS
AGGGACAGAAAATACCCAAC+TGG 0.538414 7.3:-86979992 MS.gene79560:CDS
TGCTGGCTATTGGAAAGCAA+CGG 0.539232 7.3:-86979945 MS.gene79560:CDS
TGATGAATTCCCAACCATTG+AGG 0.543008 7.3:+86978859 None:intergenic
TGCGTGGATAGGTTGTGCTC+AGG 0.549718 7.3:+86979767 None:intergenic
CAACCTATCCACGCATGGAA+TGG 0.557142 7.3:-86979759 MS.gene79560:intron
GTATTCATGCATTACCCAGT+TGG 0.557840 7.3:+86979829 None:intergenic
AGAGTGAGTTTCCCTCCAAT+CGG 0.564192 7.3:+86979807 None:intergenic
GCCGCAAGTCCAGTAGAAGC+TGG 0.566476 7.3:+86978716 None:intergenic
AATTCACCTGGCAAATCCCA+TGG 0.572720 7.3:+86980909 None:intergenic
AGGTCTAACTCCTCTAGAGA+TGG 0.574295 7.3:-86979139 MS.gene79560:CDS
CAATATTACCATTCCATGCG+TGG 0.574955 7.3:+86979751 None:intergenic
AATTCTGGAAAGAAAATGGA+TGG 0.577198 7.3:-86979175 MS.gene79560:CDS
TTGGATTCTTCTCCATACAA+TGG 0.577344 7.3:-86979079 MS.gene79560:CDS
GGTAATGCATGAATACCGAT+TGG 0.588791 7.3:-86979822 MS.gene79560:CDS
ATGGGAATGACATGTTTCAA+AGG 0.592664 7.3:-86978763 MS.gene79560:CDS
CTAAAATGGGAGAAACAGAA+TGG 0.594315 7.3:-86980030 MS.gene79560:CDS
TGGATGGTTCAAAACTTGGA+AGG 0.595179 7.3:-86979159 MS.gene79560:CDS
AATGCATGAATACCGATTGG+AGG 0.598490 7.3:-86979819 MS.gene79560:CDS
GAAAATACCCAACTGGTCAA+AGG 0.598845 7.3:-86979985 MS.gene79560:CDS
ATGCATGAATACCGATTGGA+GGG 0.612532 7.3:-86979818 MS.gene79560:CDS
TGTCATCAACCTTCTTAACA+AGG 0.615528 7.3:+86980982 None:intergenic
TGTGAACCATGGGATTTGCC+AGG 0.615720 7.3:-86980915 MS.gene79560:intron
AATTGAACGTCCATCTCTAG+AGG 0.623412 7.3:+86979129 None:intergenic
GAAAGACAAAGAGATTTACA+AGG 0.634963 7.3:-86979921 MS.gene79560:CDS
GAGCACAACCTATCCACGCA+TGG 0.636675 7.3:-86979764 MS.gene79560:CDS
TATGAATAAGTGTGAACCAT+GGG 0.641317 7.3:-86980925 MS.gene79560:CDS
GGAATGACATGTTTCAAAGG+TGG 0.646299 7.3:-86978760 MS.gene79560:CDS
TATGGAGAAGAATCCAACAA+TGG 0.663829 7.3:+86979085 None:intergenic
TGATGCTGATATCTCATCTG+TGG 0.664657 7.3:-86978789 MS.gene79560:CDS
AAAGACAAAGAGATTTACAA+GGG 0.672892 7.3:-86979920 MS.gene79560:CDS
ATATGAATAAGTGTGAACCA+TGG 0.681966 7.3:-86980926 MS.gene79560:CDS
CTGGCTATTGGAAAGCAACG+GGG 0.700603 7.3:-86979943 MS.gene79560:CDS
TACATAGGAAGAGCTCCGAG+CGG 0.756904 7.3:-86979860 MS.gene79560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGAAAGAAAAACAATT+TGG - chr7.3:86979353-86979372 MS.gene79560:intron 15.0%
!!! AGTTTACTTTATTTAGAAAA+AGG + chr7.3:86980319-86980338 None:intergenic 15.0%
!!! GTGAATTTAATGTTTTTTAT+AGG - chr7.3:86978887-86978906 MS.gene79560:CDS 15.0%
!!! TTTTTTTCTTTATTTAGAGA+TGG - chr7.3:86979727-86979746 MS.gene79560:intron 15.0%
!! AACATATCTTAGTAAATGTT+TGG + chr7.3:86980242-86980261 None:intergenic 20.0%
!! ATGATATTATATTAGTAGTC+TGG - chr7.3:86978930-86978949 MS.gene79560:CDS 20.0%
!! TAAAAAACATTAAATTCACC+TGG + chr7.3:86978886-86978905 None:intergenic 20.0%
!! TCAAAAAATGGAAAATGAAA+AGG - chr7.3:86978717-86978736 MS.gene79560:CDS 20.0%
!!! AAGAAAGCATAATTAAGTTA+TGG + chr7.3:86979706-86979725 None:intergenic 20.0%
!!! GTATTTTTTTTTCAAAAGCA+CGG + chr7.3:86980167-86980186 None:intergenic 20.0%
!!! TTCATTTTCCATTTTTTGAT+TGG + chr7.3:86978716-86978735 None:intergenic 20.0%
! AAAATTGCAAAAGCTATCAT+TGG + chr7.3:86981089-86981108 None:intergenic 25.0%
! AAAGACAAAGAGATTTACAA+GGG - chr7.3:86979860-86979879 MS.gene79560:CDS 25.0%
! AAATCAATACCTTGTTAAGA+AGG - chr7.3:86978789-86978808 MS.gene79560:CDS 25.0%
! ACAAGGGAAATTCATTAATT+GGG - chr7.3:86979876-86979895 MS.gene79560:CDS 25.0%
! ATTTGTCAAAAAAAAGTCCA+AGG + chr7.3:86978971-86978990 None:intergenic 25.0%
! CAAAGAACACTAAAATTATG+TGG - chr7.3:86979311-86979330 MS.gene79560:intron 25.0%
! CTTGATATTTCATCTTAATG+CGG + chr7.3:86979219-86979238 None:intergenic 25.0%
! GAATGTTTCCAATCAAAAAA+TGG - chr7.3:86978705-86978724 MS.gene79560:CDS 25.0%
! TAAGTTTGACGATGATAAAA+TGG + chr7.3:86980211-86980230 None:intergenic 25.0%
! TACAAGGGAAATTCATTAAT+TGG - chr7.3:86979875-86979894 MS.gene79560:CDS 25.0%
! TATTTAGAGATGGCTAAAAT+GGG - chr7.3:86979737-86979756 MS.gene79560:intron 25.0%
! TTACTCCTTAGATATATTGT+CGG - chr7.3:86979492-86979511 MS.gene79560:intron 25.0%
! TTATTTAGAGATGGCTAAAA+TGG - chr7.3:86979736-86979755 MS.gene79560:intron 25.0%
! TTCTTACTCTTCAAAACAAA+TGG - chr7.3:86980853-86980872 MS.gene79560:intron 25.0%
! TTGATTTATAAGCTCTTCAT+CGG + chr7.3:86978776-86978795 None:intergenic 25.0%
! TTTACAGTTGCAAAAAAGAA+AGG - chr7.3:86979027-86979046 MS.gene79560:CDS 25.0%
!! AGAAATCAGAAATAGTGTTT+TGG + chr7.3:86980733-86980752 None:intergenic 25.0%
!!! CACATAATTTTAGTGTTCTT+TGG + chr7.3:86979313-86979332 None:intergenic 25.0%
!!! TTTTGTTTCTCTGTTTGATT+TGG + chr7.3:86980782-86980801 None:intergenic 25.0%
AAAATGGATGGTTCAAAACT+TGG - chr7.3:86980617-86980636 MS.gene79560:intron 30.0%
AATTGGGATGAAAAAAACAC+TGG - chr7.3:86979892-86979911 MS.gene79560:CDS 30.0%
ACGTAATTCTATCAAACACA+TGG + chr7.3:86980137-86980156 None:intergenic 30.0%
AGATACCGACAATATATCTA+AGG + chr7.3:86979500-86979519 None:intergenic 30.0%
ATATCTCATCTGTGGTATAT+GGG - chr7.3:86980999-86981018 MS.gene79560:CDS 30.0%
ATATGAATAAGTGTGAACCA+TGG - chr7.3:86978854-86978873 MS.gene79560:CDS 30.0%
ATATTGTCGGTATCTTACTT+TGG - chr7.3:86979505-86979524 MS.gene79560:intron 30.0%
CTAGATCTAATCAATGACTT+TGG + chr7.3:86979155-86979174 None:intergenic 30.0%
CTGCAGATCTATAAAATTGA+TGG - chr7.3:86979127-86979146 MS.gene79560:CDS 30.0%
GAAAGAAAAACAATTTGGAG+AGG - chr7.3:86979358-86979377 MS.gene79560:intron 30.0%
GAAAGACAAAGAGATTTACA+AGG - chr7.3:86979859-86979878 MS.gene79560:CDS 30.0%
TATGAATAAGTGTGAACCAT+GGG - chr7.3:86978855-86978874 MS.gene79560:CDS 30.0%
! AATTCTGGAAAGAAAATGGA+TGG - chr7.3:86980605-86980624 MS.gene79560:intron 30.0%
! CAATTGTTGCTTCAGTTAAA+GGG + chr7.3:86980886-86980905 None:intergenic 30.0%
! CATCAATTTTATAGATCTGC+AGG + chr7.3:86979129-86979148 None:intergenic 30.0%
!! TTTCTCTGTTTGATTTGGAT+TGG + chr7.3:86980777-86980796 None:intergenic 30.0%
!!! AAAACACTGGTTTTCTACAT+AGG - chr7.3:86979905-86979924 MS.gene79560:CDS 30.0%
!!! AACCTTTTTTGTAGAGTGAA+TGG - chr7.3:86980555-86980574 MS.gene79560:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG - chr7.3:86979768-86979787 MS.gene79560:CDS 30.0%
!!! ACCTTTTTTGTAGAGTGAAT+GGG - chr7.3:86980556-86980575 MS.gene79560:intron 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG - chr7.3:86979769-86979788 MS.gene79560:CDS 30.0%
AAAAGAAAAGTTGTGACGAC+TGG - chr7.3:86979439-86979458 MS.gene79560:intron 35.0%
AAAGAAAAGTTGTGACGACT+GGG - chr7.3:86979440-86979459 MS.gene79560:intron 35.0%
ACACAAGATGACAACATTGT+TGG - chr7.3:86980803-86980822 MS.gene79560:intron 35.0%
ACCCATTCACTCTACAAAAA+AGG + chr7.3:86980560-86980579 None:intergenic 35.0%
ATGCGGTGTATATTTGATTC+AGG + chr7.3:86979202-86979221 None:intergenic 35.0%
ATGGGAATGACATGTTTCAA+AGG - chr7.3:86981017-86981036 MS.gene79560:CDS 35.0%
CTAAAATGGGAGAAACAGAA+TGG - chr7.3:86979750-86979769 MS.gene79560:intron 35.0%
GAAAAGGTCAAATTTCCTGT+TGG - chr7.3:86978733-86978752 MS.gene79560:CDS 35.0%
GATATCTCATCTGTGGTATA+TGG - chr7.3:86980998-86981017 MS.gene79560:CDS 35.0%
TATGGAGAAGAATCCAACAA+TGG + chr7.3:86980698-86980717 None:intergenic 35.0%
TCTCCCAAAAGAAAACTCTT+GGG + chr7.3:86980960-86980979 None:intergenic 35.0%
TGTCATCAACCTTCTTAACA+AGG + chr7.3:86978801-86978820 None:intergenic 35.0%
TTCCTAGATCTACCAATGAA+GGG + chr7.3:86979414-86979433 None:intergenic 35.0%
TTGGATTCTTCTCCATACAA+TGG - chr7.3:86980701-86980720 MS.gene79560:intron 35.0%
TTTATAAGCTCTTCATCGGT+TGG + chr7.3:86978772-86978791 None:intergenic 35.0%
TTTCCTAGATCTACCAATGA+AGG + chr7.3:86979415-86979434 None:intergenic 35.0%
! ACAATTTGGAGAGGTGATTT+TGG - chr7.3:86979367-86979386 MS.gene79560:intron 35.0%
! CAATTTGGAGAGGTGATTTT+GGG - chr7.3:86979368-86979387 MS.gene79560:intron 35.0%
! GCAATTGTTGCTTCAGTTAA+AGG + chr7.3:86980887-86980906 None:intergenic 35.0%
! GCGTAATTCTGGAAAGAAAA+TGG - chr7.3:86980601-86980620 MS.gene79560:intron 35.0%
! GTCATTGATTAGATCTAGAC+TGG - chr7.3:86979157-86979176 MS.gene79560:CDS 35.0%
! TCTCCCAAGAGTTTTCTTTT+GGG - chr7.3:86980954-86980973 MS.gene79560:CDS 35.0%
! TTCTCCCAAGAGTTTTCTTT+TGG - chr7.3:86980953-86980972 MS.gene79560:CDS 35.0%
!! ATCTCTATTGACTCCATTGT+TGG - chr7.3:86980682-86980701 MS.gene79560:intron 35.0%
!! TTTTGGTCTTCACCATTGTA+TGG + chr7.3:86980716-86980735 None:intergenic 35.0%
!!! GATTTTTTACCAGCTTCTAC+TGG - chr7.3:86981055-86981074 MS.gene79560:CDS 35.0%
AAACCTAAACCACCCTTCAT+TGG - chr7.3:86979399-86979418 MS.gene79560:intron 40.0%
AAGAAAAGTTGTGACGACTG+GGG - chr7.3:86979441-86979460 MS.gene79560:intron 40.0%
AATTCCCAACCATTGAGGTT+TGG + chr7.3:86980919-86980938 None:intergenic 40.0%
AATTGAACGTCCATCTCTAG+AGG + chr7.3:86980654-86980673 None:intergenic 40.0%
ACATGTTTCAAAGGTGGTCT+GGG - chr7.3:86981026-86981045 MS.gene79560:CDS 40.0%
ACCAACATGACACTAATAGG+CGG - chr7.3:86979592-86979611 MS.gene79560:intron 40.0%
ACCAATAGAGCTACTAATGC+TGG - chr7.3:86979818-86979837 MS.gene79560:CDS 40.0%
AGGTCAAATTTCCTGTTGGT+TGG - chr7.3:86978737-86978756 MS.gene79560:CDS 40.0%
ATAGGTTGTGCTCAGGAAAA+AGG + chr7.3:86980009-86980028 None:intergenic 40.0%
CAATATTACCATTCCATGCG+TGG + chr7.3:86980032-86980051 None:intergenic 40.0%
CTCTCCCAAAAGAAAACTCT+TGG + chr7.3:86980961-86980980 None:intergenic 40.0%
CTGACACATCATAATGTGTC+AGG - chr7.3:86979562-86979581 MS.gene79560:intron 40.0%
GAAAATACCCAACTGGTCAA+AGG - chr7.3:86979795-86979814 MS.gene79560:CDS 40.0%
GACACATTATGATGTGTCAG+TGG + chr7.3:86979562-86979581 None:intergenic 40.0%
GGAATGACATGTTTCAAAGG+TGG - chr7.3:86981020-86981039 MS.gene79560:CDS 40.0%
GGATTTGAAAAACTACGCCT+TGG - chr7.3:86978951-86978970 MS.gene79560:CDS 40.0%
GGTAATGCATGAATACCGAT+TGG - chr7.3:86979958-86979977 MS.gene79560:CDS 40.0%
GTATTCATGCATTACCCAGT+TGG + chr7.3:86979954-86979973 None:intergenic 40.0%
TATTGGTCCTTTGACCAGTT+GGG + chr7.3:86979805-86979824 None:intergenic 40.0%
TGATGAATTCCCAACCATTG+AGG + chr7.3:86980924-86980943 None:intergenic 40.0%
TGATGCTGATATCTCATCTG+TGG - chr7.3:86980991-86981010 MS.gene79560:CDS 40.0%
TGATTCCAACCAAACCTCAA+TGG - chr7.3:86980907-86980926 MS.gene79560:intron 40.0%
TGCACCAACATGACACTAAT+AGG - chr7.3:86979589-86979608 MS.gene79560:intron 40.0%
TGGATGGTTCAAAACTTGGA+AGG - chr7.3:86980621-86980640 MS.gene79560:intron 40.0%
TTGTCGGTATCTTACTTTGG+TGG - chr7.3:86979508-86979527 MS.gene79560:intron 40.0%
! AATGCATGAATACCGATTGG+AGG - chr7.3:86979961-86979980 MS.gene79560:CDS 40.0%
! ATGCATGAATACCGATTGGA+GGG - chr7.3:86979962-86979981 MS.gene79560:CDS 40.0%
! GGTCAAATTTCCTGTTGGTT+GGG - chr7.3:86978738-86978757 MS.gene79560:CDS 40.0%
! GTCAAATTTCCTGTTGGTTG+GGG - chr7.3:86978739-86978758 MS.gene79560:CDS 40.0%
! GTCTTTGAGAAGCGTAATTC+TGG - chr7.3:86980590-86980609 MS.gene79560:intron 40.0%
! TTTTATAGATCTGCAGGCGT+CGG + chr7.3:86979123-86979142 None:intergenic 40.0%
AATTCACCTGGCAAATCCCA+TGG + chr7.3:86978874-86978893 None:intergenic 45.0%
AGAGTGAGTTTCCCTCCAAT+CGG + chr7.3:86979976-86979995 None:intergenic 45.0%
AGGGACAGAAAATACCCAAC+TGG - chr7.3:86979788-86979807 MS.gene79560:CDS 45.0%
CAACATGACACTAATAGGCG+GGG - chr7.3:86979594-86979613 MS.gene79560:intron 45.0%
CACCCTTCATTGGTAGATCT+AGG - chr7.3:86979409-86979428 MS.gene79560:intron 45.0%
CCAACATGACACTAATAGGC+GGG - chr7.3:86979593-86979612 MS.gene79560:intron 45.0%
CCAACCAAACCTCAATGGTT+GGG - chr7.3:86980912-86980931 MS.gene79560:intron 45.0%
CTACCAATGAAGGGTGGTTT+AGG + chr7.3:86979405-86979424 None:intergenic 45.0%
CTAGATCTACCAATGAAGGG+TGG + chr7.3:86979411-86979430 None:intergenic 45.0%
CTATTGGTCCTTTGACCAGT+TGG + chr7.3:86979806-86979825 None:intergenic 45.0%
GACATGTTTCAAAGGTGGTC+TGG - chr7.3:86981025-86981044 MS.gene79560:CDS 45.0%
GAGCGGTGAAAAAACCAACT+GGG - chr7.3:86979937-86979956 MS.gene79560:CDS 45.0%
TCCAACCAAACCTCAATGGT+TGG - chr7.3:86980911-86980930 MS.gene79560:intron 45.0%
TTACCATTCCATGCGTGGAT+AGG + chr7.3:86980027-86980046 None:intergenic 45.0%
! AGGTCTAACTCCTCTAGAGA+TGG - chr7.3:86980641-86980660 MS.gene79560:intron 45.0%
! GAGCTACTAATGCTGGCTAT+TGG - chr7.3:86979825-86979844 MS.gene79560:CDS 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG + chr7.3:86979822-86979841 None:intergenic 45.0%
! TGCTGGCTATTGGAAAGCAA+CGG - chr7.3:86979835-86979854 MS.gene79560:CDS 45.0%
!!! CAGTTGGTTTTTTCACCGCT+CGG + chr7.3:86979938-86979957 None:intergenic 45.0%
!!! TATAAAAATTACTTTTATTA+TGG + chr7.3:86980358-86980377 None:intergenic 5.0%
AAGTTGTGACGACTGGGGTT+TGG - chr7.3:86979446-86979465 MS.gene79560:intron 50.0%
ACCAGCTTCTACTGGACTTG+CGG - chr7.3:86981063-86981082 MS.gene79560:CDS 50.0%
CAACCTATCCACGCATGGAA+TGG - chr7.3:86980021-86980040 MS.gene79560:CDS 50.0%
CCCGCCTATTAGTGTCATGT+TGG + chr7.3:86979596-86979615 None:intergenic 50.0%
CGAGCGGTGAAAAAACCAAC+TGG - chr7.3:86979936-86979955 MS.gene79560:CDS 50.0%
CTGGCTATTGGAAAGCAACG+GGG - chr7.3:86979837-86979856 MS.gene79560:CDS 50.0%
GCTGGCTATTGGAAAGCAAC+GGG - chr7.3:86979836-86979855 MS.gene79560:CDS 50.0%
GGAAAGAATCCCCAACCAAC+AGG + chr7.3:86978751-86978770 None:intergenic 50.0%
TACATAGGAAGAGCTCCGAG+CGG - chr7.3:86979920-86979939 MS.gene79560:CDS 50.0%
TGTGAACCATGGGATTTGCC+AGG - chr7.3:86978865-86978884 MS.gene79560:CDS 50.0%
TTTGGCAAGGAGAAAGCGAG+TGG - chr7.3:86979464-86979483 MS.gene79560:intron 50.0%
! CCCAACCATTGAGGTTTGGT+TGG + chr7.3:86980915-86980934 None:intergenic 50.0%
GAGCACAACCTATCCACGCA+TGG - chr7.3:86980016-86980035 MS.gene79560:CDS 55.0%
TGCGTGGATAGGTTGTGCTC+AGG + chr7.3:86980016-86980035 None:intergenic 55.0%
GCCGCAAGTCCAGTAGAAGC+TGG + chr7.3:86981067-86981086 None:intergenic 60.0%
GTGACGACTGGGGTTTGGCA+AGG - chr7.3:86979451-86979470 MS.gene79560:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 86978691 86981111 86978691 ID=MS.gene79560
chr7.3 mRNA 86978691 86981111 86978691 ID=MS.gene79560.t1;Parent=MS.gene79560
chr7.3 exon 86980916 86981111 86980916 ID=MS.gene79560.t1.exon1;Parent=MS.gene79560.t1
chr7.3 CDS 86980916 86981111 86980916 ID=cds.MS.gene79560.t1;Parent=MS.gene79560.t1
chr7.3 exon 86979760 86980058 86979760 ID=MS.gene79560.t1.exon2;Parent=MS.gene79560.t1
chr7.3 CDS 86979760 86980058 86979760 ID=cds.MS.gene79560.t1;Parent=MS.gene79560.t1
chr7.3 exon 86978691 86979233 86978691 ID=MS.gene79560.t1.exon3;Parent=MS.gene79560.t1
chr7.3 CDS 86978691 86979233 86978691 ID=cds.MS.gene79560.t1;Parent=MS.gene79560.t1
Gene Sequence

>MS.gene79560

ATGGGATCAAATGAGAATGTTTCCAATCAAAAAATGGAAAATGAAAAGGTCAAATTTCCTGTTGGTTGGGGATTCTTTCCAACCGATGAAGAGCTTATAAATCAATACCTTGTTAAGAAGGTTGATGACAATAGCTTCTGTGCTATAGCTATTGCTGAAGTTGATATGAATAAGTGTGAACCATGGGATTTGCCAGGTGAATTTAATGTTTTTTATAGGCAAATATTAGTTGTTATTATATGATATTATATTAGTAGTCTGGATTTGAAAAACTACGCCTTGGACTTTTTTTTGACAAATAAACGATGTTGATAGAGTACATTGATACAACATACATTTACAGTTGCAAAAAAGAAAGGATGAATTTACAAAAATAAAAGCAAAATACACAAGTCTACAAATATGACTTTATTCAAGTGTAAAAAAATACCGACGCCTGCAGATCTATAAAATTGATGGCGCCAAAGTCATTGATTAGATCTAGACTGGATCAAAGCTAATCTTTCAACCTGAATCAAATATACACCGCATTAAGATGAAATATCAAGAAAACACTATACAATGAAGAGAAATGATAACAAACAACGTCGTACTTTGATGACGAATTCATACAAACATACCAAAGAACACTAAAATTATGTGGAAATCACTTATTTAACTGAAAAAAGAAAGAAAAACAATTTGGAGAGGTGATTTTGGGAAAAAATTAAACCTAAACCACCCTTCATTGGTAGATCTAGGAAAAAAGAAAAGAAAAGTTGTGACGACTGGGGTTTGGCAAGGAGAAAGCGAGTGGTTTAATTACTCCTTAGATATATTGTCGGTATCTTACTTTGGTGGTTATATATTTTCTCTTAATTACTATGTGCCACTGACACATCATAATGTGTCAGGTATCTGCACCAACATGACACTAATAGGCGGGGTTAAATTTAGTTATTTTATTTTTTAAAGTGATTATGAGTGTCGATTTGTCAGTCTCATGTCTAATGTATGTATGTCTTTCAGTGTTCCATAACTTAATTATGCTTTCTTATTTTTTTCTTTATTTAGAGATGGCTAAAATGGGAGAAACAGAATGGTATTTTTTCTGTGTGAGGGACAGAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACGGGGAAAGACAAAGAGATTTACAAGGGAAATTCATTAATTGGGATGAAAAAAACACTGGTTTTCTACATAGGAAGAGCTCCGAGCGGTGAAAAAACCAACTGGGTAATGCATGAATACCGATTGGAGGGAAACTCACTCTCTGAGTACAACCTTTTTCCTGAGCACAACCTATCCACGCATGGAATGGTAATATTGCTTAATTTTTTATTGCTTTGTTTTTGTCAATGATTTCTACTCTGACTACATGTGAAAATTTGTTAGTGTATGTTCACATCGACCATGTGTTTGATAGAATTACGTTATGTTACCGTGCTTTTGAAAAAAAAATACTTTAAAATTTTAACAAAGTAACCATTTTATCATCGTCAAACTTATCGCTGATCCAAACATTTACTAAGATATGTTTGTAACAAATTATAAAAATAATGATTTTGATATATATAATTAAGAGATTAATTTCCTTTTTCTAAATAAAGTAAACTATTTTATGTTTGATCACCATAATAAAAGTAATTTTTATAAAAAAATCAATTATAAAATATAAATTTTAGAGAAACTACTCGAAACAACTTTTTGTTTGAAACATATATAATATTCTTTCATATAGTATTTTATTTAAAAAAACTTTAATAAATGAATAAAAATTAAATAATGATAGTTTTTTTTTAAATGTTTTTTTCATTTTATATTAATGTGTTAACCTTTTTTGTAGAGTGAATGGGTTCTCACTAGAGTCTTTGAGAAGCGTAATTCTGGAAAGAAAATGGATGGTTCAAAACTTGGAAGGTCTAACTCCTCTAGAGATGGACGTTCAATTACTAATGCATCTCTATTGACTCCATTGTTGGATTCTTCTCCATACAATGGTGAAGACCAAAACACTATTTCTGATTTCTCAAATGTGTTCAATTCATTCTCCAATCCAAATCAAACAGAGAAACAAAAAACACAAGATGACAACATTGTTGGTAACAATGAAACTAGTCTCTTGAACATTTCTTACTCTTCAAAACAAATGGATGTTTACCCTTTAACTGAAGCAACAATTGCTGATTCCAACCAAACCTCAATGGTTGGGAATTCATCAAACTTTTTCTTCTCCCAAGAGTTTTCTTTTGGGAGAGACTTTGATGCTGATGCTGATATCTCATCTGTGGTATATGGGAATGACATGTTTCAAAGGTGGTCTGGGAATCAAGATTTTTTACCAGCTTCTACTGGACTTGCGGCCAATGATAGCTTTTGCAATTTTTAA
Protein sequence

>MS.gene79560.t1

MGSNENVSNQKMENEKVKFPVGWGFFPTDEELINQYLVKKVDDNSFCAIAIAEVDMNKCEPWDLPEMAKMGETEWYFFCVRDRKYPTGQRTNRATNAGYWKATGKDKEIYKGNSLIGMKKTLVFYIGRAPSGEKTNWVMHEYRLEGNSLSEYNLFPEHNLSTHGMSEWVLTRVFEKRNSGKKMDGSKLGRSNSSRDGRSITNASLLTPLLDSSPYNGEDQNTISDFSNVFNSFSNPNQTEKQKTQDDNIVGNNETSLLNISYSSKQMDVYPLTEATIADSNQTSMVGNSSNFFFSQEFSFGRDFDADADISSVVYGNDMFQRWSGNQDFLPASTGLAANDSFCNF