AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80192

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80192.t1 MTR_3g106060 91.497 294 24 1 1 293 1 294 0.0 562
MS.gene80192.t1 MTR_1g013760 58.784 296 92 8 1 286 1 276 5.85e-106 310
MS.gene80192.t1 MTR_2g105060 44.043 277 115 6 29 286 58 313 1.89e-67 213
MS.gene80192.t1 MTR_4g007060 41.875 320 135 10 6 286 7 314 7.63e-61 196
MS.gene80192.t1 MTR_4g007060 45.290 276 120 8 30 286 17 280 1.58e-60 194
MS.gene80192.t1 MTR_2g105060 42.248 258 109 6 48 286 2 238 9.77e-59 188
MS.gene80192.t1 MTR_1g013790 41.899 179 69 4 123 290 86 240 2.20e-37 133
MS.gene80192.t1 MTR_4g007060 41.089 202 84 4 6 178 7 202 7.07e-34 124
MS.gene80192.t1 MTR_4g094412 47.748 111 48 3 85 195 191 291 5.13e-27 110
MS.gene80192.t1 MTR_3g053330 30.279 251 120 6 1 196 59 309 5.96e-27 109
MS.gene80192.t1 MTR_4g094412 47.748 111 48 3 85 195 200 300 7.00e-27 109
MS.gene80192.t1 MTR_7g110720 30.233 301 141 11 29 285 99 374 4.16e-26 106
MS.gene80192.t1 MTR_7g110720 35.266 207 84 6 123 285 201 401 3.77e-25 104
MS.gene80192.t1 MTR_4g107970 55.000 80 34 1 117 196 159 236 5.24e-25 104
MS.gene80192.t1 MTR_2g023930 58.750 80 28 2 116 195 288 362 7.00e-25 104
MS.gene80192.t1 MTR_4g107970 55.000 80 34 1 117 196 236 313 7.39e-25 104
MS.gene80192.t1 MTR_4g132430 32.512 203 98 4 30 195 118 318 1.12e-24 103
MS.gene80192.t1 MTR_4g132430 56.579 76 31 1 120 195 111 184 3.00e-24 100
MS.gene80192.t1 MTR_2g088000 55.556 81 31 2 116 196 332 407 1.07e-23 101
MS.gene80192.t1 MTR_7g009730 64.407 59 21 0 137 195 218 276 1.73e-23 100
MS.gene80192.t1 MTR_2g045360 46.465 99 48 2 120 215 195 291 1.40e-22 97.1
MS.gene80192.t1 MTR_5g094430 62.712 59 21 1 137 195 229 286 1.08e-21 94.4
MS.gene80192.t1 MTR_5g094430 48.387 62 30 2 139 200 67 126 8.33e-11 62.4
MS.gene80192.t1 MTR_5g016610 39.850 133 59 4 70 196 140 257 1.22e-21 92.0
MS.gene80192.t1 MTR_5g094430 62.712 59 21 1 137 195 251 308 1.26e-21 94.4
MS.gene80192.t1 MTR_5g094430 48.387 62 30 2 139 200 89 148 7.93e-11 62.8
MS.gene80192.t1 MTR_5g094430 62.712 59 21 1 137 195 363 420 1.51e-21 94.7
MS.gene80192.t1 MTR_5g094430 48.387 62 30 2 139 200 201 260 6.88e-11 63.2
MS.gene80192.t1 MTR_3g056100 62.712 59 21 1 137 195 257 314 2.17e-21 93.6
MS.gene80192.t1 MTR_3g056100 44.286 70 37 2 139 208 100 167 1.16e-11 65.1
MS.gene80192.t1 MTR_3g056100 62.712 59 21 1 137 195 270 327 2.32e-21 93.6
MS.gene80192.t1 MTR_3g056100 44.286 70 37 2 139 208 100 167 1.23e-11 65.1
MS.gene80192.t1 MTR_3g056100 62.712 59 21 1 137 195 401 458 2.47e-21 94.4
MS.gene80192.t1 MTR_3g056100 44.286 70 37 2 139 208 244 311 1.37e-11 65.1
MS.gene80192.t1 MTR_4g049760 51.351 74 36 0 122 195 274 347 2.64e-21 94.0
MS.gene80192.t1 MTR_3g056100 62.712 59 21 1 137 195 414 471 2.73e-21 94.0
MS.gene80192.t1 MTR_3g056100 44.286 70 37 2 139 208 244 311 1.43e-11 65.1
MS.gene80192.t1 MTR_5g097490 53.333 75 32 2 122 196 238 309 8.02e-21 91.7
MS.gene80192.t1 MTR_5g042920 51.163 86 36 4 110 195 297 376 9.18e-21 92.0
MS.gene80192.t1 MTR_5g042920 56.140 57 23 2 139 195 152 206 4.42e-14 72.4
MS.gene80192.t1 MTR_4g082580 42.478 113 56 5 111 220 256 362 3.20e-20 90.1
MS.gene80192.t1 MTR_4g082580 41.860 86 43 3 125 210 137 215 1.25e-11 65.1
MS.gene80192.t1 MTR_4g094908 58.621 58 24 0 139 196 267 324 4.93e-20 89.0
MS.gene80192.t1 MTR_4g049790 49.333 75 38 0 121 195 295 369 6.27e-20 90.1
MS.gene80192.t1 MTR_5g091390 56.667 60 25 1 136 195 155 213 8.62e-20 87.8
MS.gene80192.t1 MTR_3g104750 55.932 59 25 1 137 195 103 160 1.04e-19 84.3
MS.gene80192.t1 MTR_1g086790 55.882 68 27 2 136 203 156 220 1.06e-19 87.8
MS.gene80192.t1 MTR_7g109800 44.792 96 48 3 112 207 121 211 1.27e-19 87.0
MS.gene80192.t1 MTR_1g070455 56.897 58 25 0 139 196 294 351 2.14e-19 87.4
MS.gene80192.t1 MTR_7g011820 54.795 73 30 3 123 195 397 466 2.98e-19 87.8
MS.gene80192.t1 MTR_7g011820 42.857 91 49 3 139 229 229 316 2.76e-14 73.2
MS.gene80192.t1 MTR_3g031220 51.316 76 34 3 120 195 349 421 3.68e-19 87.8
MS.gene80192.t1 MTR_3g031220 42.169 83 37 3 113 195 182 253 7.66e-14 72.0
MS.gene80192.t1 MTR_7g062220 35.088 171 90 6 72 224 41 208 4.98e-19 85.9
MS.gene80192.t1 MTR_4g094588 55.932 59 25 1 137 195 177 234 5.00e-19 85.9
MS.gene80192.t1 MTR_1g009613 56.140 57 25 0 139 195 263 319 6.46e-19 85.9
MS.gene80192.t1 MTR_5g074400 51.316 76 34 3 120 195 404 476 8.57e-19 86.7
MS.gene80192.t1 MTR_5g074400 52.632 57 25 2 139 195 244 298 4.53e-14 72.8
MS.gene80192.t1 MTR_1g015140 54.237 59 26 1 137 195 101 158 1.12e-18 81.6
MS.gene80192.t1 MTR_4g127040 42.000 100 54 2 102 197 205 304 1.54e-18 84.3
MS.gene80192.t1 MTR_5g043880 55.000 60 26 1 136 195 122 180 1.99e-18 83.6
MS.gene80192.t1 MTR_1g077780 48.718 78 37 3 118 195 44 118 2.26e-18 80.5
MS.gene80192.t1 MTR_2g033820 44.565 92 43 3 136 220 201 291 2.34e-18 84.7
MS.gene80192.t1 MTR_7g071120 55.932 59 25 1 137 195 323 380 2.98e-18 85.1
MS.gene80192.t1 MTR_7g071120 46.479 71 30 3 131 195 153 221 9.54e-13 68.6
MS.gene80192.t1 MTR_7g100510 55.932 59 25 1 137 195 360 417 3.52e-18 84.3
MS.gene80192.t1 MTR_7g100510 49.351 77 35 3 123 199 176 248 5.53e-16 78.2
MS.gene80192.t1 MTR_3g009470 57.627 59 24 1 137 195 494 551 4.71e-18 84.7
MS.gene80192.t1 MTR_3g009470 53.448 58 25 2 138 195 280 335 1.81e-12 67.8
MS.gene80192.t1 MTR_4g013260 55.932 59 25 1 137 195 335 392 4.98e-18 84.3
MS.gene80192.t1 MTR_4g013260 50.000 58 28 1 138 195 184 240 5.48e-14 72.4
MS.gene80192.t1 MTR_7g080020 42.000 100 52 3 99 195 453 549 8.16e-18 84.0
MS.gene80192.t1 MTR_7g080020 52.542 59 26 2 138 196 280 336 5.37e-12 66.6
MS.gene80192.t1 MTR_8g087000 53.448 58 27 0 139 196 78 135 9.80e-18 80.9
MS.gene80192.t1 MTR_7g080000 48.684 76 36 2 120 195 416 488 1.10e-17 83.6
MS.gene80192.t1 MTR_7g080000 50.000 60 28 2 137 196 233 290 1.81e-11 65.1
MS.gene80192.t1 MTR_8g087000 53.448 58 27 0 139 196 77 134 1.12e-17 80.9
MS.gene80192.t1 MTR_7g028415 54.237 59 26 1 137 195 92 149 2.65e-17 78.2
MS.gene80192.t1 MTR_7g028710 54.237 59 26 1 137 195 92 149 2.65e-17 78.2
MS.gene80192.t1 MTR_8g092140 51.667 60 28 1 137 196 159 217 5.61e-17 78.6
MS.gene80192.t1 MTR_3g095080 48.718 78 35 3 137 213 143 216 6.99e-17 78.2
MS.gene80192.t1 MTR_3g095080 51.667 60 28 1 137 196 167 225 8.47e-17 78.2
MS.gene80192.t1 MTR_8g096730 50.877 57 27 1 139 195 71 126 9.32e-17 75.9
MS.gene80192.t1 MTR_8g092010 52.542 59 27 1 137 195 107 164 1.14e-16 76.6
MS.gene80192.t1 MTR_4g122530 51.667 60 28 1 136 195 206 264 1.97e-16 79.3
MS.gene80192.t1 MTR_2g083870 47.143 70 37 0 139 208 81 150 2.97e-16 77.0
MS.gene80192.t1 MTR_2g016770 43.056 72 41 0 139 210 36 107 3.66e-16 75.9
MS.gene80192.t1 MTR_7g079010 55.932 59 25 1 137 195 140 197 3.71e-16 76.3
MS.gene80192.t1 MTR_2g016770 43.056 72 41 0 139 210 28 99 4.03e-16 75.9
MS.gene80192.t1 MTR_8g007270 51.667 60 28 1 137 196 153 211 5.29e-16 75.9
MS.gene80192.t1 MTR_3g095040 54.237 59 26 1 137 195 117 174 6.06e-16 75.1
MS.gene80192.t1 MTR_0117s0040 49.123 57 29 0 139 195 75 131 1.02e-15 75.5
MS.gene80192.t1 MTR_2g032030 45.205 73 40 0 139 211 268 340 1.40e-15 76.6
MS.gene80192.t1 MTR_2g032030 45.205 73 40 0 139 211 268 340 2.27e-15 76.3
MS.gene80192.t1 MTR_3g108960 49.123 57 29 0 139 195 315 371 3.47e-15 75.5
MS.gene80192.t1 MTR_7g109600 50.877 57 28 0 139 195 54 110 3.76e-15 73.9
MS.gene80192.t1 MTR_4g130900 50.877 57 27 1 139 195 360 415 3.80e-15 75.9
MS.gene80192.t1 MTR_2g024350 49.153 59 30 0 138 196 8 66 4.37e-15 73.2
MS.gene80192.t1 MTR_8g028565 49.123 57 29 0 139 195 156 212 5.99e-15 74.3
MS.gene80192.t1 MTR_2g024380 50.847 59 29 0 138 196 251 309 6.47e-15 75.1
MS.gene80192.t1 MTR_8g098945 39.326 89 50 1 139 227 130 214 9.89e-15 73.2
MS.gene80192.t1 MTR_3g031220 42.169 83 37 3 113 195 182 253 4.99e-14 72.0
MS.gene80192.t1 MTR_5g074200 40.230 87 46 4 139 225 221 301 5.59e-14 71.6
MS.gene80192.t1 MTR_4g047580 39.189 74 45 0 121 194 264 337 6.85e-14 72.0
MS.gene80192.t1 MTR_7g079040 47.368 57 30 0 139 195 155 211 9.23e-14 70.9
MS.gene80192.t1 MTR_1g099600 36.842 95 57 1 122 216 172 263 1.00e-13 70.5
MS.gene80192.t1 MTR_1g078260 42.667 75 39 3 123 196 234 305 4.45e-13 69.7
MS.gene80192.t1 MTR_7g117200 38.235 102 51 3 108 199 82 181 4.76e-13 68.9
MS.gene80192.t1 MTR_3g009470 53.448 58 25 2 138 195 280 335 2.10e-12 67.4
MS.gene80192.t1 MTR_3g090860 49.153 59 28 1 137 193 132 190 5.05e-12 65.9
MS.gene80192.t1 MTR_8g099350 50.000 58 27 1 138 193 132 189 5.09e-12 65.9
MS.gene80192.t1 MTR_5g097500 44.615 65 35 1 131 195 223 286 6.74e-12 65.5
MS.gene80192.t1 MTR_2g075750 38.202 89 44 3 125 207 11 94 7.57e-12 63.2
MS.gene80192.t1 MTR_5g067680 44.615 65 34 1 131 193 195 259 1.09e-11 65.1
MS.gene80192.t1 MTR_2g075610 43.077 65 35 1 132 194 23 87 1.28e-11 62.8
MS.gene80192.t1 MTR_8g027860 36.170 94 53 2 107 193 100 193 1.76e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80192.t1 AT1G80840 45.791 297 133 10 6 285 9 294 7.48e-71 221
MS.gene80192.t1 AT2G25000 44.151 265 99 7 29 286 1 223 4.43e-61 194
MS.gene80192.t1 AT2G25000 44.151 265 99 7 29 286 1 223 4.43e-61 194
MS.gene80192.t1 AT2G25000 42.612 291 106 9 15 286 18 266 7.73e-61 194
MS.gene80192.t1 AT2G25000 44.151 265 99 7 29 286 23 245 1.13e-60 193
MS.gene80192.t1 AT4G31800 38.994 318 138 6 6 286 7 305 3.49e-59 191
MS.gene80192.t1 AT4G31800 50.898 167 63 1 120 286 93 240 4.75e-51 168
MS.gene80192.t1 AT4G31800 40.097 207 87 5 6 175 7 213 1.60e-33 123
MS.gene80192.t1 AT1G62300 31.621 253 110 6 4 195 119 369 1.27e-27 112
MS.gene80192.t1 AT1G68150 45.528 123 60 4 120 240 219 336 1.79e-26 107
MS.gene80192.t1 AT4G22070 57.895 76 30 1 120 195 281 354 4.47e-25 105
MS.gene80192.t1 AT4G22070 57.895 76 30 1 120 195 281 354 4.47e-25 105
MS.gene80192.t1 AT4G22070 57.895 76 30 1 120 195 281 354 4.47e-25 105
MS.gene80192.t1 AT4G22070 57.895 76 30 1 120 195 281 354 4.47e-25 105
MS.gene80192.t1 AT4G04450 56.579 76 31 1 120 195 182 255 1.26e-24 102
MS.gene80192.t1 AT4G01720 33.503 197 92 5 33 195 105 296 2.79e-24 102
MS.gene80192.t1 AT4G04450 56.579 76 31 1 120 195 276 349 3.19e-24 102
MS.gene80192.t1 AT5G15130 47.959 98 46 2 99 196 151 243 6.38e-24 101
MS.gene80192.t1 AT5G15130 47.959 98 46 2 99 196 193 285 7.48e-24 101
MS.gene80192.t1 AT1G18860 62.712 59 22 0 137 195 238 296 4.86e-22 96.3
MS.gene80192.t1 AT5G26170 56.667 60 25 1 137 196 112 170 1.45e-21 89.7
MS.gene80192.t1 AT1G13960 53.012 83 33 4 113 195 236 312 1.75e-21 93.2
MS.gene80192.t1 AT1G13960 56.140 57 23 2 139 195 77 131 1.15e-14 73.9
MS.gene80192.t1 AT1G13960 53.012 83 33 4 113 195 389 465 3.59e-21 93.6
MS.gene80192.t1 AT1G13960 56.140 57 23 2 139 195 230 284 1.48e-14 73.9
MS.gene80192.t1 AT5G07100 44.954 109 50 6 88 195 98 197 3.78e-21 89.7
MS.gene80192.t1 AT5G07100 47.541 61 31 1 139 199 25 84 1.10e-12 66.2
MS.gene80192.t1 AT5G07100 44.954 109 50 6 88 195 98 197 3.78e-21 89.7
MS.gene80192.t1 AT5G07100 47.541 61 31 1 139 199 25 84 1.10e-12 66.2
MS.gene80192.t1 AT5G07100 44.954 109 50 6 88 195 98 197 3.78e-21 89.7
MS.gene80192.t1 AT5G07100 47.541 61 31 1 139 199 25 84 1.10e-12 66.2
MS.gene80192.t1 AT5G07100 44.954 109 50 6 88 195 98 197 3.78e-21 89.7
MS.gene80192.t1 AT5G07100 47.541 61 31 1 139 199 25 84 1.10e-12 66.2
MS.gene80192.t1 AT4G26640 61.017 59 22 1 137 195 204 261 1.40e-20 90.9
MS.gene80192.t1 AT4G26640 45.070 71 37 2 130 200 27 95 3.78e-11 63.5
MS.gene80192.t1 AT4G26640 61.017 59 22 1 137 195 204 261 1.40e-20 90.9
MS.gene80192.t1 AT4G26640 45.070 71 37 2 130 200 27 95 3.78e-11 63.5
MS.gene80192.t1 AT4G26640 61.017 59 22 1 137 195 204 261 1.40e-20 90.9
MS.gene80192.t1 AT4G26640 45.070 71 37 2 130 200 27 95 3.78e-11 63.5
MS.gene80192.t1 AT4G26640 61.017 59 22 1 137 195 204 261 1.40e-20 90.9
MS.gene80192.t1 AT4G26640 45.070 71 37 2 130 200 27 95 3.78e-11 63.5
MS.gene80192.t1 AT5G07100 42.742 124 57 7 77 195 176 290 1.43e-20 90.1
MS.gene80192.t1 AT5G07100 34.351 131 79 4 72 199 51 177 1.18e-12 67.4
MS.gene80192.t1 AT4G26640 61.017 59 22 1 137 195 308 365 2.29e-20 91.3
MS.gene80192.t1 AT4G26640 45.070 71 37 2 130 200 131 199 3.76e-11 63.9
MS.gene80192.t1 AT4G26640 61.017 59 22 1 137 195 340 397 2.35e-20 91.3
MS.gene80192.t1 AT4G26640 45.070 71 37 2 130 200 163 231 3.43e-11 63.9
MS.gene80192.t1 AT4G26640 61.017 59 22 1 137 195 380 437 2.35e-20 91.3
MS.gene80192.t1 AT4G26640 45.070 71 37 2 130 200 203 271 3.44e-11 63.9
MS.gene80192.t1 AT2G03340 51.807 83 34 4 113 195 395 471 3.80e-20 90.5
MS.gene80192.t1 AT2G03340 49.275 69 33 2 127 195 239 305 5.97e-15 75.1
MS.gene80192.t1 AT2G04880 61.017 59 22 1 137 195 282 339 3.85e-20 90.5
MS.gene80192.t1 AT2G04880 33.000 100 63 3 137 236 110 205 9.37e-11 62.4
MS.gene80192.t1 AT2G04880 61.017 59 22 1 137 195 306 363 4.49e-20 90.1
MS.gene80192.t1 AT1G29860 56.667 60 25 1 136 195 134 192 4.66e-20 88.2
MS.gene80192.t1 AT5G49520 51.389 72 30 2 124 195 211 277 6.33e-20 89.4
MS.gene80192.t1 AT5G46350 39.695 131 61 6 119 249 169 281 1.24e-19 87.8
MS.gene80192.t1 AT2G23320 55.172 58 26 0 139 196 241 298 2.41e-19 86.7
MS.gene80192.t1 AT2G47260 48.810 84 40 2 112 195 150 230 2.63e-19 87.0
MS.gene80192.t1 AT5G56270 52.632 76 33 3 120 195 471 543 2.74e-19 88.2
MS.gene80192.t1 AT5G56270 47.761 67 33 2 129 195 264 328 2.20e-12 67.8
MS.gene80192.t1 AT4G18170 46.753 77 35 3 119 195 158 228 3.09e-19 86.3
MS.gene80192.t1 AT4G31550 48.571 70 36 0 139 208 246 315 3.28e-19 86.3
MS.gene80192.t1 AT4G31550 48.571 70 36 0 139 208 247 316 3.29e-19 86.7
MS.gene80192.t1 AT2G30590 57.895 57 24 0 139 195 314 370 3.35e-19 87.0
MS.gene80192.t1 AT5G28650 58.621 58 24 0 139 196 263 320 3.92e-19 86.3
MS.gene80192.t1 AT1G69810 42.697 89 48 2 108 195 117 203 6.34e-19 85.9
MS.gene80192.t1 AT1G69810 42.697 89 48 2 108 195 175 261 6.83e-19 86.3
MS.gene80192.t1 AT1G69310 48.052 77 34 3 119 195 133 203 7.20e-19 85.1
MS.gene80192.t1 AT1G69310 48.052 77 34 3 119 195 133 203 7.20e-19 85.1
MS.gene80192.t1 AT1G69310 48.052 77 34 3 119 195 133 203 7.20e-19 85.1
MS.gene80192.t1 AT1G64000 55.932 59 25 1 137 195 113 170 7.54e-19 82.8
MS.gene80192.t1 AT3G01970 54.688 64 28 1 137 200 64 126 7.99e-19 81.6
MS.gene80192.t1 AT2G38470 57.627 59 24 1 137 195 361 418 1.24e-18 86.3
MS.gene80192.t1 AT2G38470 55.172 58 24 2 138 195 184 239 9.93e-15 74.7
MS.gene80192.t1 AT3G04670 55.172 58 26 0 139 196 263 320 1.58e-18 84.7
MS.gene80192.t1 AT5G41570 47.436 78 38 2 118 195 80 154 3.40e-18 80.9
MS.gene80192.t1 AT4G24240 53.448 58 27 0 139 196 282 339 3.65e-18 84.0
MS.gene80192.t1 AT3G01080 49.398 83 36 4 113 195 286 362 3.91e-18 84.3
MS.gene80192.t1 AT3G01080 39.080 87 51 2 139 225 168 252 1.01e-11 65.5
MS.gene80192.t1 AT5G13080 54.237 59 26 1 137 195 66 123 4.16e-18 79.7
MS.gene80192.t1 AT3G62340 55.738 61 26 1 135 195 115 174 4.33e-18 82.4
MS.gene80192.t1 AT3G01080 49.398 83 36 4 113 195 324 400 4.53e-18 84.3
MS.gene80192.t1 AT3G01080 39.080 87 51 2 139 225 206 290 1.37e-11 65.1
MS.gene80192.t1 AT2G24570 53.125 64 28 1 139 202 244 305 6.29e-18 82.8
MS.gene80192.t1 AT2G30250 59.649 57 22 1 139 195 329 384 8.05e-18 83.2
MS.gene80192.t1 AT2G30250 46.154 65 31 3 139 203 167 227 5.54e-11 63.2
MS.gene80192.t1 AT5G52830 42.697 89 50 1 139 227 166 253 4.63e-17 80.5
MS.gene80192.t1 AT1G29280 50.877 57 28 0 139 195 75 131 6.63e-17 79.0
MS.gene80192.t1 AT5G64810 50.847 59 28 1 137 195 109 166 8.20e-17 77.4
MS.gene80192.t1 AT1G55600 57.895 57 23 1 139 195 308 363 1.85e-16 79.7
MS.gene80192.t1 AT2G21900 54.237 59 26 1 137 195 108 165 2.06e-16 76.6
MS.gene80192.t1 AT4G30935 39.785 93 48 2 139 231 332 416 2.26e-16 79.3
MS.gene80192.t1 AT4G26440 31.953 169 74 6 65 195 263 428 3.80e-16 79.0
MS.gene80192.t1 AT4G26440 48.387 62 30 2 139 200 179 238 1.55e-11 65.1
MS.gene80192.t1 AT2G44745 52.542 59 27 1 137 195 144 201 4.85e-16 75.9
MS.gene80192.t1 AT4G39410 45.946 74 37 2 137 208 222 294 5.44e-16 77.0
MS.gene80192.t1 AT2G46130 45.556 90 43 4 116 205 13 96 6.45e-16 72.8
MS.gene80192.t1 AT2G37260 45.333 75 34 2 121 195 258 325 1.34e-15 76.6
MS.gene80192.t1 AT2G37260 56.897 58 23 2 139 196 86 141 7.87e-15 74.3
MS.gene80192.t1 AT2G37260 45.333 75 34 2 121 195 256 323 1.39e-15 76.3
MS.gene80192.t1 AT2G37260 56.897 58 23 2 139 196 84 139 8.23e-15 74.3
MS.gene80192.t1 AT3G58710 52.632 57 27 0 139 195 72 128 1.85e-15 75.1
MS.gene80192.t1 AT3G58710 52.632 57 27 0 139 195 71 127 1.88e-15 75.1
MS.gene80192.t1 AT2G37260 45.333 75 34 2 121 195 338 405 1.96e-15 76.6
MS.gene80192.t1 AT2G37260 56.897 58 23 2 139 196 166 221 8.55e-15 74.7
MS.gene80192.t1 AT2G34830 47.692 65 34 0 131 195 208 272 2.12e-15 76.3
MS.gene80192.t1 AT2G34830 47.692 65 34 0 131 195 217 281 2.27e-15 76.3
MS.gene80192.t1 AT1G30650 47.692 65 34 0 131 195 210 274 4.76e-15 75.5
MS.gene80192.t1 AT4G01250 36.441 118 63 3 139 249 129 241 6.22e-15 73.9
MS.gene80192.t1 AT1G69310 46.753 77 31 4 119 195 133 199 7.63e-15 73.6
MS.gene80192.t1 AT5G43290 46.154 65 34 1 131 195 107 170 9.14e-15 73.2
MS.gene80192.t1 AT4G23550 38.961 77 47 0 137 213 139 215 9.14e-14 70.9
MS.gene80192.t1 AT5G45050 49.123 57 29 0 139 195 1153 1209 1.85e-13 71.2
MS.gene80192.t1 AT5G45050 49.123 57 29 0 139 195 1181 1237 1.99e-13 71.2
MS.gene80192.t1 AT5G45050 49.123 57 29 0 139 195 1042 1098 2.19e-13 70.9
MS.gene80192.t1 AT2G46400 43.836 73 37 2 123 193 91 161 8.09e-13 67.8
MS.gene80192.t1 AT2G46130 44.444 90 40 5 116 205 13 92 5.89e-12 61.6
MS.gene80192.t1 AT3G01080 50.820 61 28 2 139 199 206 264 1.19e-11 64.7
MS.gene80192.t1 AT5G45260 40.260 77 44 1 139 213 1209 1285 5.05e-11 63.9
MS.gene80192.t1 AT4G12020 34.559 136 67 7 132 267 462 575 8.55e-11 63.2
MS.gene80192.t1 AT4G12020 34.559 136 67 7 132 267 462 575 9.04e-11 63.2
MS.gene80192.t1 AT4G12020 34.559 136 67 7 132 267 462 575 9.04e-11 63.2
MS.gene80192.t1 AT4G12020 34.559 136 67 7 132 267 462 575 9.40e-11 63.2
MS.gene80192.t1 AT4G12020 34.559 136 67 7 132 267 462 575 9.40e-11 63.2
MS.gene80192.t1 AT4G12020 34.559 136 67 7 132 267 462 575 9.74e-11 63.2
MS.gene80192.t1 AT4G12020 43.750 64 34 2 132 195 462 523 9.97e-11 63.2

Find 65 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACTTGCCACTGCCATTTC+TGG 0.147288 3.4:-92494705 MS.gene80192:CDS
GCCTTTCTCTTTCGCGATAT+TGG 0.191286 3.4:+92496904 None:intergenic
GCAAGTGCTGTTGCGAAATT+AGG 0.254403 3.4:+92494720 None:intergenic
CCTCATCCTCACCAATTAAT+TGG 0.285074 3.4:-92494866 MS.gene80192:CDS
CTTGGTCCAGCCAAGAAAAT+TGG 0.286759 3.4:-92494817 MS.gene80192:CDS
TCAGGTTGCTGATCAGGTTT+TGG 0.288511 3.4:-92497064 MS.gene80192:intron
TGAGCTGTACGCCAATTAAT+TGG 0.305961 3.4:+92494855 None:intergenic
GAACTAGTGAGTGACATTTC+AGG 0.307165 3.4:+92494933 None:intergenic
CATTTCTGGAAGAATAATTC+TGG 0.326631 3.4:-92494691 MS.gene80192:CDS
ATGAATTCAGGTTGCTGATC+AGG 0.334261 3.4:-92497070 MS.gene80192:intron
CAGAATTATTCTTCCAGAAA+TGG 0.354382 3.4:+92494692 None:intergenic
TTCAAGTGCTCCTTTGCTCC+TGG 0.357212 3.4:-92496520 MS.gene80192:CDS
GGATATCAGTGGAGAAAATA+TGG 0.364647 3.4:-92496583 MS.gene80192:CDS
GCACATGTGGTTCAGTTTCT+CGG 0.370673 3.4:+92496999 None:intergenic
GAAAATTGTATCAATAGGTT+TGG 0.376161 3.4:-92496871 MS.gene80192:CDS
ACCAATATCGCGAAAGAGAA+AGG 0.387719 3.4:-92496905 MS.gene80192:CDS
GTGTTGAAAATTGTATCAAT+AGG 0.392499 3.4:-92496876 MS.gene80192:CDS
ACCTAAACACTCTCCCTTCT+CGG 0.392654 3.4:-92497210 MS.gene80192:CDS
CCCGAGAAGGGAGAGTGTTT+AGG 0.410406 3.4:+92497209 None:intergenic
TATATACTAACCGCACTAAC+AGG 0.415297 3.4:+92497181 None:intergenic
GTCTAAGTAGCGAGAATAAG+AGG 0.454713 3.4:-92497026 MS.gene80192:CDS
CTAGAGATAATCCCTCTCCT+AGG 0.467386 3.4:-92496549 MS.gene80192:CDS
GCTGGAACTAAATTATATGT+AGG 0.476216 3.4:+92494891 None:intergenic
CTGGAACTAAATTATATGTA+GGG 0.478747 3.4:+92494892 None:intergenic
CCTAAACACTCTCCCTTCTC+GGG 0.479017 3.4:-92497209 MS.gene80192:CDS
TGGAAGAATAATTCTGGATG+TGG 0.479580 3.4:-92494685 MS.gene80192:CDS
TCTGTTGAACTAATAACTGC+TGG 0.493414 3.4:+92494766 None:intergenic
AGAACTTACTAAGCTGGCAT+TGG 0.495787 3.4:+92496741 None:intergenic
CCAATTAATTGGTGAGGATG+AGG 0.495942 3.4:+92494866 None:intergenic
CACAGGGCAGCCAGGAGCAA+AGG 0.503671 3.4:+92496510 None:intergenic
AATTGTAGAACTTACTAAGC+TGG 0.507761 3.4:+92496735 None:intergenic
TATGTGGTCACTAATATGCT+CGG 0.512756 3.4:+92494987 None:intergenic
ATGTAGGGGTTGTTTCACTT+TGG 0.521708 3.4:+92494907 None:intergenic
ATTGGTGAGGATGAGGATGC+TGG 0.529139 3.4:+92494873 None:intergenic
TCAAGCTTCAGAGCTTGACT+TGG 0.532387 3.4:-92494835 MS.gene80192:CDS
TGTCTCCTCCTCAGTAGTAA+TGG 0.551953 3.4:+92496825 None:intergenic
GCAGTTATTAGTTCAACAGA+TGG 0.557437 3.4:-92494763 MS.gene80192:CDS
ATGTGGTCACTAATATGCTC+GGG 0.561198 3.4:+92494988 None:intergenic
GACCTCGCCGAGAGTTTCCA+AGG 0.562692 3.4:-92496785 MS.gene80192:CDS
CTAACAGGTGTGTCCCGAGA+AGG 0.571023 3.4:+92497196 None:intergenic
GTTGTGCTCTCCTTCGTATG+TGG 0.572822 3.4:+92494971 None:intergenic
GAGCACTTGAAGTAAGCCCT+AGG 0.576521 3.4:+92496532 None:intergenic
CAGTATAATTGTCGCACATG+TGG 0.579804 3.4:+92496986 None:intergenic
TAACAGGTGTGTCCCGAGAA+GGG 0.581505 3.4:+92497197 None:intergenic
ATCTGTACGCACAAGAACCT+TGG 0.586094 3.4:+92496768 None:intergenic
TAGAGATAATCCCTCTCCTA+GGG 0.588394 3.4:-92496548 MS.gene80192:CDS
TATTCTTCCAGAAATGGCAG+TGG 0.593871 3.4:+92494698 None:intergenic
TTGAAGTAAGCCCTAGGAGA+GGG 0.594565 3.4:+92496538 None:intergenic
TTTCAGGTTGGTGATGCGCA+TGG 0.595445 3.4:+92494949 None:intergenic
GTATTGAAGTATGTGAAGGA+TGG 0.607747 3.4:-92496604 MS.gene80192:intron
ATACATGTGTGAATTCACTT+CGG 0.612284 3.4:+92494657 None:intergenic
TCGGGACACACCTGTTAGTG+CGG 0.618406 3.4:-92497191 MS.gene80192:intron
TTGGGTATTGAAGTATGTGA+AGG 0.631029 3.4:-92496608 MS.gene80192:intron
CCACATGGAACCAACGTGTG+TGG 0.633718 3.4:-92497245 None:intergenic
CTTGAAGTAAGCCCTAGGAG+AGG 0.642278 3.4:+92496537 None:intergenic
ACAAGAACCTTGGAAACTCT+CGG 0.643388 3.4:+92496778 None:intergenic
ATGTGAAGGATGGATATCAG+TGG 0.648222 3.4:-92496594 MS.gene80192:CDS
TGGAACTAAATTATATGTAG+GGG 0.651480 3.4:+92494893 None:intergenic
CAGCACCATTACTACTGAGG+AGG 0.656419 3.4:-92496830 MS.gene80192:CDS
AACCTTGGAAACTCTCGGCG+AGG 0.657343 3.4:+92496783 None:intergenic
TGTACGCCAATTAATTGGTG+AGG 0.660265 3.4:+92494860 None:intergenic
TAGTGAGTGACATTTCAGGT+TGG 0.685861 3.4:+92494937 None:intergenic
GAGCAGCACCATTACTACTG+AGG 0.711173 3.4:-92496833 MS.gene80192:CDS
ATATTAGTGACCACATACGA+AGG 0.729115 3.4:-92494981 MS.gene80192:CDS
AGAGAAGTATCCACACACGT+TGG 0.751057 3.4:+92497235 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTATATTAATTGTG+AGG - chr3.4:92496554-92496573 MS.gene80192:CDS 10.0%
!! AATAATAATTAACATAAAGA+GGG + chr3.4:92496882-92496901 None:intergenic 10.0%
!! AATATAATAACAATATAGAT+TGG - chr3.4:92495866-92495885 MS.gene80192:intron 10.0%
!! TAATAATAATTAACATAAAG+AGG + chr3.4:92496883-92496902 None:intergenic 10.0%
!! TCTTTATGTTAATTATTATT+AGG - chr3.4:92496882-92496901 MS.gene80192:CDS 10.0%
!! TTTATATAAAATAATGAGAA+AGG - chr3.4:92496629-92496648 MS.gene80192:intron 10.0%
!!! ATATAACATTTTTTATACTT+AGG + chr3.4:92496097-92496116 None:intergenic 10.0%
!! AAAAATTAACTTATGAATTC+AGG - chr3.4:92494830-92494849 MS.gene80192:CDS 15.0%
!! AATGTTATATATCAAATGAT+TGG - chr3.4:92496107-92496126 MS.gene80192:intron 15.0%
!! ATAATAAAGATATTAGTGTT+TGG - chr3.4:92495251-92495270 MS.gene80192:intron 15.0%
!! CAAAAAACATTTAATCAATA+AGG - chr3.4:92496415-92496434 MS.gene80192:intron 15.0%
!! TGTTAAAATAATTAAGAGAT+TGG + chr3.4:92495463-92495482 None:intergenic 15.0%
!!! ATGATTTTGAATTTTATTAG+TGG - chr3.4:92496236-92496255 MS.gene80192:intron 15.0%
!!! CATAAGTTAATTTTTGAATA+TGG + chr3.4:92494825-92494844 None:intergenic 15.0%
!!! TGATTTTGAATTTTATTAGT+GGG - chr3.4:92496237-92496256 MS.gene80192:intron 15.0%
!! ATATGGTATGTTATAATTCA+AGG + chr3.4:92494808-92494827 None:intergenic 20.0%
!! GTTGGAAATATATAGAAAAA+TGG - chr3.4:92495759-92495778 MS.gene80192:intron 20.0%
!!! GATTTTGAATTTTATTAGTG+GGG - chr3.4:92496238-92496257 MS.gene80192:intron 20.0%
!!! TGGTTACAAAATTTTATTAG+TGG - chr3.4:92496272-92496291 MS.gene80192:intron 20.0%
!!! TGGTTTTGAAATTTTATTAG+TGG - chr3.4:92496292-92496311 MS.gene80192:intron 20.0%
!!! TGTTGTCTTGATTTAATTTT+TGG - chr3.4:92495222-92495241 MS.gene80192:intron 20.0%
!!! TTTTGCTTATTAGAAAACTA+AGG + chr3.4:92496400-92496419 None:intergenic 20.0%
! AATAAAAAATCCCCCTTATT+TGG + chr3.4:92495961-92495980 None:intergenic 25.0%
! CTGGAACTAAATTATATGTA+GGG + chr3.4:92497023-92497042 None:intergenic 25.0%
! GAAAATTGTATCAATAGGTT+TGG - chr3.4:92495041-92495060 MS.gene80192:intron 25.0%
! GTGTTGAAAATTGTATCAAT+AGG - chr3.4:92495036-92495055 MS.gene80192:intron 25.0%
! TAAACATTGTCAACCAAATA+AGG - chr3.4:92495557-92495576 MS.gene80192:intron 25.0%
! TGAAAAAAAGGAGAATTCTT+TGG - chr3.4:92495593-92495612 MS.gene80192:intron 25.0%
! TGATACCAATAGAATACATT+GGG - chr3.4:92496819-92496838 MS.gene80192:CDS 25.0%
! TGGAACTAAATTATATGTAG+GGG + chr3.4:92497022-92497041 None:intergenic 25.0%
! TGTTATAATTCAAGGAAAAG+AGG + chr3.4:92494800-92494819 None:intergenic 25.0%
! TTGATACCAATAGAATACAT+TGG - chr3.4:92496818-92496837 MS.gene80192:CDS 25.0%
!! ATAAAAAATCCCCCTTATTT+GGG + chr3.4:92495960-92495979 None:intergenic 25.0%
!!! AAAATAACTAAGGCTTTGTT+TGG - chr3.4:92495700-92495719 MS.gene80192:intron 25.0%
!!! AAATAACTAAGGCTTTGTTT+GGG - chr3.4:92495701-92495720 MS.gene80192:intron 25.0%
!!! AAGAATTCTCCTTTTTTTCA+AGG + chr3.4:92495593-92495612 None:intergenic 25.0%
!!! AGAATTCTCCTTTTTTTCAA+GGG + chr3.4:92495592-92495611 None:intergenic 25.0%
!!! CGAGATTGTAATTTTAACAA+AGG + chr3.4:92496721-92496740 None:intergenic 25.0%
!!! TAAATACCTTCTTTTTCACA+GGG + chr3.4:92495421-92495440 None:intergenic 25.0%
!!! TTAAATACCTTCTTTTTCAC+AGG + chr3.4:92495422-92495441 None:intergenic 25.0%
!!! TTTATACTTAGGCTTTGTTT+GGG + chr3.4:92496086-92496105 None:intergenic 25.0%
!!! TTTTATACTTAGGCTTTGTT+TGG + chr3.4:92496087-92496106 None:intergenic 25.0%
AATTGTAGAACTTACTAAGC+TGG + chr3.4:92495180-92495199 None:intergenic 30.0%
ATTCATGAAAACTTATCTCG+TGG - chr3.4:92496487-92496506 MS.gene80192:intron 30.0%
CAGAATTATTCTTCCAGAAA+TGG + chr3.4:92497223-92497242 None:intergenic 30.0%
GAACTCAAAAATTGTATTGG+GGG + chr3.4:92495936-92495955 None:intergenic 30.0%
GCTGGAACTAAATTATATGT+AGG + chr3.4:92497024-92497043 None:intergenic 30.0%
GGAACTCAAAAATTGTATTG+GGG + chr3.4:92495937-92495956 None:intergenic 30.0%
GGGAACTCAAAAATTGTATT+GGG + chr3.4:92495938-92495957 None:intergenic 30.0%
TAAAGCCCAATGTATTCTAT+TGG + chr3.4:92496827-92496846 None:intergenic 30.0%
TGGAAGAAATAGAAGACATT+GGG + chr3.4:92496018-92496037 None:intergenic 30.0%
TTACAATCTCGAATTCTTGT+TGG - chr3.4:92496730-92496749 MS.gene80192:intron 30.0%
TTCGTCATAGACCAAATTAT+TGG + chr3.4:92496208-92496227 None:intergenic 30.0%
! CAAAATGTTTCGTGGAATTT+TGG - chr3.4:92495504-92495523 MS.gene80192:intron 30.0%
! CAAAATTCCACGAAACATTT+TGG + chr3.4:92495506-92495525 None:intergenic 30.0%
! CATTTCTGGAAGAATAATTC+TGG - chr3.4:92497221-92497240 MS.gene80192:CDS 30.0%
! GATACAATTTTCAACACTCT+CGG + chr3.4:92495033-92495052 None:intergenic 30.0%
! TAAAAAATCCCCCTTATTTG+GGG + chr3.4:92495959-92495978 None:intergenic 30.0%
! TCATCAACTACCAATTTTCT+TGG + chr3.4:92497108-92497127 None:intergenic 30.0%
! TTCTTTGGTACACTTTTAGT+TGG - chr3.4:92495608-92495627 MS.gene80192:intron 30.0%
!! GAGATGCTGAATTTGTTTTT+GGG - chr3.4:92495286-92495305 MS.gene80192:intron 30.0%
!! TCTTTGGTACACTTTTAGTT+GGG - chr3.4:92495609-92495628 MS.gene80192:intron 30.0%
!! TGAGATGCTGAATTTGTTTT+TGG - chr3.4:92495285-92495304 MS.gene80192:intron 30.0%
AAGAAATAGAAGACATTGGG+AGG + chr3.4:92496015-92496034 None:intergenic 35.0%
ATATTAGTGACCACATACGA+AGG - chr3.4:92496931-92496950 MS.gene80192:CDS 35.0%
ATTAAGTAGGAGTAGCTTCT+AGG - chr3.4:92495642-92495661 MS.gene80192:intron 35.0%
CTAACATGTCAAGTAGTACT+TGG - chr3.4:92496758-92496777 MS.gene80192:CDS 35.0%
GAATTCCTCCCTTGAAAAAA+AGG - chr3.4:92495581-92495600 MS.gene80192:intron 35.0%
GACCAAATTATTGGAACCAA+CGG + chr3.4:92496199-92496218 None:intergenic 35.0%
GCAGTTATTAGTTCAACAGA+TGG - chr3.4:92497149-92497168 MS.gene80192:intron 35.0%
GGAAAAAAGGAAAGAACAAG+TGG + chr3.4:92496038-92496057 None:intergenic 35.0%
GGATATCAGTGGAGAAAATA+TGG - chr3.4:92495329-92495348 MS.gene80192:intron 35.0%
GGGGAACTCAAAAATTGTAT+TGG + chr3.4:92495939-92495958 None:intergenic 35.0%
GGGTACGAGTTTAATTAAGT+AGG - chr3.4:92495629-92495648 MS.gene80192:intron 35.0%
GTATTGAAGTATGTGAAGGA+TGG - chr3.4:92495308-92495327 MS.gene80192:intron 35.0%
GTGGAAGAAATAGAAGACAT+TGG + chr3.4:92496019-92496038 None:intergenic 35.0%
TATATACTAACCGCACTAAC+AGG + chr3.4:92494734-92494753 None:intergenic 35.0%
TATGTGGTCACTAATATGCT+CGG + chr3.4:92496928-92496947 None:intergenic 35.0%
TCAAAAATTGTATTGGGGGA+GGG + chr3.4:92495932-92495951 None:intergenic 35.0%
TCTGTTGAACTAATAACTGC+TGG + chr3.4:92497149-92497168 None:intergenic 35.0%
TGGAAGAATAATTCTGGATG+TGG - chr3.4:92497227-92497246 MS.gene80192:CDS 35.0%
TTAGTCACCAAAATGTTTCG+TGG - chr3.4:92495496-92495515 MS.gene80192:intron 35.0%
TTGGAACCAACGGTATTATA+TGG + chr3.4:92496189-92496208 None:intergenic 35.0%
! AAAAAATCCCCCTTATTTGG+GGG + chr3.4:92495958-92495977 None:intergenic 35.0%
! TTAGTGGGGTTTCTTTTTGT+TGG - chr3.4:92496252-92496271 MS.gene80192:intron 35.0%
!! TACCGTTGGTTCCAATAATT+TGG - chr3.4:92496194-92496213 MS.gene80192:intron 35.0%
!! TTGGGTATTGAAGTATGTGA+AGG - chr3.4:92495304-92495323 MS.gene80192:intron 35.0%
!!! ATTCTCCTTTTTTTCAAGGG+AGG + chr3.4:92495589-92495608 None:intergenic 35.0%
!!! TTTTGAGTTCCCCCAAATAA+GGG - chr3.4:92495946-92495965 MS.gene80192:intron 35.0%
!!! TTTTTGAGTTCCCCCAAATA+AGG - chr3.4:92495945-92495964 MS.gene80192:intron 35.0%
ACAAGAACCTTGGAAACTCT+CGG + chr3.4:92495137-92495156 None:intergenic 40.0%
ACCAATATCGCGAAAGAGAA+AGG - chr3.4:92495007-92495026 MS.gene80192:CDS 40.0%
AGAACTTACTAAGCTGGCAT+TGG + chr3.4:92495174-92495193 None:intergenic 40.0%
AGGGAGGAATTCTCCTTATT+TGG + chr3.4:92495573-92495592 None:intergenic 40.0%
ATGTGAAGGATGGATATCAG+TGG - chr3.4:92495318-92495337 MS.gene80192:intron 40.0%
ATGTGGTCACTAATATGCTC+GGG + chr3.4:92496927-92496946 None:intergenic 40.0%
CAGTATAATTGTCGCACATG+TGG + chr3.4:92494929-92494948 None:intergenic 40.0%
CCAATTAATTGGTGAGGATG+AGG + chr3.4:92497049-92497068 None:intergenic 40.0%
CCTCATCCTCACCAATTAAT+TGG - chr3.4:92497046-92497065 MS.gene80192:CDS 40.0%
CTCAAAAATTGTATTGGGGG+AGG + chr3.4:92495933-92495952 None:intergenic 40.0%
GAACTAGTGAGTGACATTTC+AGG + chr3.4:92496982-92497001 None:intergenic 40.0%
GTCTAAGTAGCGAGAATAAG+AGG - chr3.4:92494886-92494905 MS.gene80192:CDS 40.0%
TAGAGATAATCCCTCTCCTA+GGG - chr3.4:92495364-92495383 MS.gene80192:intron 40.0%
TATTCTTCCAGAAATGGCAG+TGG + chr3.4:92497217-92497236 None:intergenic 40.0%
TGAGCTGTACGCCAATTAAT+TGG + chr3.4:92497060-92497079 None:intergenic 40.0%
TGTACGCCAATTAATTGGTG+AGG + chr3.4:92497055-92497074 None:intergenic 40.0%
! ATGTAGGGGTTGTTTCACTT+TGG + chr3.4:92497008-92497027 None:intergenic 40.0%
! CAACTACCAATTTTCTTGGC+TGG + chr3.4:92497104-92497123 None:intergenic 40.0%
! CTTTGTTTGGGAGTTTAGAG+GGG + chr3.4:92496074-92496093 None:intergenic 40.0%
! TAGTGAGTGACATTTCAGGT+TGG + chr3.4:92496978-92496997 None:intergenic 40.0%
! TTTGAGTTCCCCCAAATAAG+GGG - chr3.4:92495947-92495966 MS.gene80192:intron 40.0%
!! ATGAATTCAGGTTGCTGATC+AGG - chr3.4:92494842-92494861 MS.gene80192:CDS 40.0%
!! GCTTTGTTTGGGAGTTTAGA+GGG + chr3.4:92496075-92496094 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG - chr3.4:92495708-92495727 MS.gene80192:intron 40.0%
ACCAACGGTATTATATGGCG+AGG + chr3.4:92496184-92496203 None:intergenic 45.0%
ACCTAAACACTCTCCCTTCT+CGG - chr3.4:92494702-92494721 MS.gene80192:CDS 45.0%
ATAGAAGACATTGGGAGGAG+AGG + chr3.4:92496010-92496029 None:intergenic 45.0%
ATCTGTACGCACAAGAACCT+TGG + chr3.4:92495147-92495166 None:intergenic 45.0%
CTAGAGATAATCCCTCTCCT+AGG - chr3.4:92495363-92495382 MS.gene80192:intron 45.0%
CTTGGTCCAGCCAAGAAAAT+TGG - chr3.4:92497095-92497114 MS.gene80192:intron 45.0%
GCACATGTGGTTCAGTTTCT+CGG + chr3.4:92494916-92494935 None:intergenic 45.0%
GCCTTTCTCTTTCGCGATAT+TGG + chr3.4:92495011-92495030 None:intergenic 45.0%
TAGAAGACATTGGGAGGAGA+GGG + chr3.4:92496009-92496028 None:intergenic 45.0%
TCAAGCTTCAGAGCTTGACT+TGG - chr3.4:92497077-92497096 MS.gene80192:intron 45.0%
TCCTCGCCATATAATACCGT+TGG - chr3.4:92496180-92496199 MS.gene80192:intron 45.0%
TGTCTCCTCCTCAGTAGTAA+TGG + chr3.4:92495090-92495109 None:intergenic 45.0%
TTGAAGTAAGCCCTAGGAGA+GGG + chr3.4:92495377-92495396 None:intergenic 45.0%
TTGAGTTCCCCCAAATAAGG+GGG - chr3.4:92495948-92495967 MS.gene80192:intron 45.0%
! ATTGTATTGGGGGAGGGTTT+TGG + chr3.4:92495926-92495945 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr3.4:92495713-92495732 MS.gene80192:intron 45.0%
! GCAAGTGCTGTTGCGAAATT+AGG + chr3.4:92497195-92497214 None:intergenic 45.0%
! TTGTATTGGGGGAGGGTTTT+GGG + chr3.4:92495925-92495944 None:intergenic 45.0%
!! AGAGAAGTATCCACACACGT+TGG + chr3.4:92494680-92494699 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr3.4:92495712-92495731 MS.gene80192:intron 45.0%
!! GGCTTTGTTTGGGAGTTTAG+AGG + chr3.4:92496076-92496095 None:intergenic 45.0%
!! TCAGGTTGCTGATCAGGTTT+TGG - chr3.4:92494848-92494867 MS.gene80192:CDS 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG + chr3.4:92496051-92496070 None:intergenic 45.0%
!!! AATTAATATAATTTTTTTAG+AGG + chr3.4:92496551-92496570 None:intergenic 5.0%
!!! ATTTTAATTTAAAATAACTA+AGG - chr3.4:92495690-92495709 MS.gene80192:intron 5.0%
ATTGGTGAGGATGAGGATGC+TGG + chr3.4:92497042-92497061 None:intergenic 50.0%
CAGCACCATTACTACTGAGG+AGG - chr3.4:92495082-92495101 MS.gene80192:intron 50.0%
CCTAAACACTCTCCCTTCTC+GGG - chr3.4:92494703-92494722 MS.gene80192:CDS 50.0%
CTTGAAGTAAGCCCTAGGAG+AGG + chr3.4:92495378-92495397 None:intergenic 50.0%
GAGCACTTGAAGTAAGCCCT+AGG + chr3.4:92495383-92495402 None:intergenic 50.0%
GAGCAGCACCATTACTACTG+AGG - chr3.4:92495079-92495098 MS.gene80192:intron 50.0%
GTTGTGCTCTCCTTCGTATG+TGG + chr3.4:92496944-92496963 None:intergenic 50.0%
GTTTGGGAGTTTAGAGGGGA+GGG + chr3.4:92496070-92496089 None:intergenic 50.0%
TAACAGGTGTGTCCCGAGAA+GGG + chr3.4:92494718-92494737 None:intergenic 50.0%
TGGCTGCCCTGTGAAAAAGA+AGG - chr3.4:92495412-92495431 MS.gene80192:intron 50.0%
TGTTTGGGAGTTTAGAGGGG+AGG + chr3.4:92496071-92496090 None:intergenic 50.0%
TTCAAGTGCTCCTTTGCTCC+TGG - chr3.4:92495392-92495411 MS.gene80192:intron 50.0%
TTTGGGAGTTTAGAGGGGAG+GGG + chr3.4:92496069-92496088 None:intergenic 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG - chr3.4:92495718-92495737 MS.gene80192:intron 50.0%
! TGTATTGGGGGAGGGTTTTG+GGG + chr3.4:92495924-92495943 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr3.4:92495711-92495730 MS.gene80192:intron 50.0%
!! TTCTTTTTCACAGGGCAGCC+AGG + chr3.4:92495413-92495432 None:intergenic 50.0%
!! TTTCAGGTTGGTGATGCGCA+TGG + chr3.4:92496966-92496985 None:intergenic 50.0%
AACCTTGGAAACTCTCGGCG+AGG + chr3.4:92495132-92495151 None:intergenic 55.0%
CTAACAGGTGTGTCCCGAGA+AGG + chr3.4:92494719-92494738 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - chr3.4:92495717-92495736 MS.gene80192:intron 55.0%
TCGGGACACACCTGTTAGTG+CGG - chr3.4:92494721-92494740 MS.gene80192:CDS 55.0%
! GCACTTGCCACTGCCATTTC+TGG - chr3.4:92497207-92497226 MS.gene80192:CDS 55.0%
! TTGGGAGGAGAGGGCTTTTG+AGG + chr3.4:92496000-92496019 None:intergenic 55.0%
!! AAGGGAGGGGAGGGTTTTGA+TGG - chr3.4:92495736-92495755 MS.gene80192:intron 55.0%
!! AGGGAGGGGAGGGTTTTGAT+GGG - chr3.4:92495737-92495756 MS.gene80192:intron 55.0%
!! AGGGGAGGGTTTTGATGGGT+TGG - chr3.4:92495741-92495760 MS.gene80192:intron 55.0%
!! CCCGAGAAGGGAGAGTGTTT+AGG + chr3.4:92494706-92494725 None:intergenic 55.0%
!! GTATTGGGGGAGGGTTTTGG+GGG + chr3.4:92495923-92495942 None:intergenic 55.0%
!!! AGGGTTTTGGGGGGTTATGG+AGG + chr3.4:92495913-92495932 None:intergenic 55.0%
!!! GGGTTTTGGGGGGTTATGGA+GGG + chr3.4:92495912-92495931 None:intergenic 55.0%
!!! TATTGGGGGAGGGTTTTGGG+GGG + chr3.4:92495922-92495941 None:intergenic 55.0%
GACCTCGCCGAGAGTTTCCA+AGG - chr3.4:92495127-92495146 MS.gene80192:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr3.4:92495723-92495742 MS.gene80192:intron 60.0%
GGAGTTTAGAGGGGAGGGGA+GGG + chr3.4:92496065-92496084 None:intergenic 60.0%
GGAGTTTGGAGGGGAAGGGA+GGG - chr3.4:92495722-92495741 MS.gene80192:intron 60.0%
! TAGAGGGGAGGGGAGGGTTT+TGG + chr3.4:92496059-92496078 None:intergenic 60.0%
!!! GGGAGGGTTTTGGGGGGTTA+TGG + chr3.4:92495916-92495935 None:intergenic 60.0%
CACAGGGCAGCCAGGAGCAA+AGG + chr3.4:92495405-92495424 None:intergenic 65.0%
GGGAGTTTAGAGGGGAGGGG+AGG + chr3.4:92496066-92496085 None:intergenic 65.0%
GGGAGTTTGGAGGGGAAGGG+AGG - chr3.4:92495721-92495740 MS.gene80192:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - chr3.4:92495727-92495746 MS.gene80192:intron 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - chr3.4:92495726-92495745 MS.gene80192:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 92494671 92497263 92494671 ID=MS.gene80192
chr3.4 mRNA 92494671 92497263 92494671 ID=MS.gene80192.t1;Parent=MS.gene80192
chr3.4 exon 92497192 92497263 92497192 ID=MS.gene80192.t1.exon1;Parent=MS.gene80192.t1
chr3.4 CDS 92497192 92497263 92497192 ID=cds.MS.gene80192.t1;Parent=MS.gene80192.t1
chr3.4 exon 92496750 92497082 92496750 ID=MS.gene80192.t1.exon2;Parent=MS.gene80192.t1
chr3.4 CDS 92496750 92497082 92496750 ID=cds.MS.gene80192.t1;Parent=MS.gene80192.t1
chr3.4 exon 92496501 92496617 92496501 ID=MS.gene80192.t1.exon3;Parent=MS.gene80192.t1
chr3.4 CDS 92496501 92496617 92496501 ID=cds.MS.gene80192.t1;Parent=MS.gene80192.t1
chr3.4 exon 92494671 92495030 92494671 ID=MS.gene80192.t1.exon4;Parent=MS.gene80192.t1
chr3.4 CDS 92494671 92495030 92494671 ID=cds.MS.gene80192.t1;Parent=MS.gene80192.t1
Gene Sequence

>MS.gene80192

ATGGAACCAACGTGTGTGGATACTTCTCTCAACCTAAACACTCTCCCTTCTCGGGACACACCTGTTAGTGCGGTTAGTATATACTATATTATACTTATAAACACATAATATCTTAGTTTTTTTTCTCCTCTTTTCCTTGAATTATAACATACCATATTCAAAAATTAACTTATGAATTCAGGTTGCTGATCAGGTTTTGGTTGAAGAGTTGAAGCGTCTAAGTAGCGAGAATAAGAGGTTAACCGAGAAACTGAACCACATGTGCGACAATTATACTGCTTTGCGAAAGCATTTGAGTCAATTCAGTCACACAAAATTTGAAAATGAATTAGTATCACCAATATCGCGAAAGAGAAAGGCCGAGAGTGTTGAAAATTGTATCAATAGGTTTGGCTATGCTATTGCTGAGAGCAGCACCATTACTACTGAGGAGGAGACATTCAAACACAACAACATGACCTCGCCGAGAGTTTCCAAGGTTCTTGTGCGTACAGATGCATCCAATGCCAGCTTAGTAAGTTCTACAATTTCAAATTTAATCATACAGATTTTGTTGTCTTGATTTAATTTTTGGAACTATATAATAAAGATATTAGTGTTTGGCTAGTACTAACTGAGATGCTGAATTTGTTTTTGGGTATTGAAGTATGTGAAGGATGGATATCAGTGGAGAAAATATGGTCAGAAAGTCACTAGAGATAATCCCTCTCCTAGGGCTTACTTCAAGTGCTCCTTTGCTCCTGGCTGCCCTGTGAAAAAGAAGGTATTTAATTAATAGAAGTAGTAGTGCCAATCTCTTAATTATTTTAACAACAAAAAAATTAGTTAGTCACCAAAATGTTTCGTGGAATTTTGGAACAATGAGTTTTAAAATGATTCTTGAAATTAAACATTGTCAACCAAATAAGGAGAATTCCTCCCTTGAAAAAAAGGAGAATTCTTTGGTACACTTTTAGTTGGGTACGAGTTTAATTAAGTAGGAGTAGCTTCTAGGAAAAACTGATTCAAAATTTAAATTTATTTTAATTTAAAATAACTAAGGCTTTGTTTGGGAGTTTGGAGGGGAAGGGAGGGGAGGGTTTTGATGGGTTGGAAATATATAGAAAAATGGACAAAAAATTCACATTTTTTGAAAGAACAGTTTTTCAGAGAATGATAAACTAATACTTATGATTAATATACTTTTAATTTTAAGAATATAATAACAATATAGATTGGATTTGAAAAATTCATATAAACCCTCCATAACCCCCCAAAACCCTCCCCCAATACAATTTTTGAGTTCCCCCAAATAAGGGGGATTTTTTATTATGAGTAAAAAATTAACCTCAAAAGCCCTCTCCTCCCAATGTCTTCTATTTCTTCCACTTGTTCTTTCCTTTTTTCCAAAACCCTCCCCTCCCCTCTAAACTCCCAAACAAAGCCTAAGTATAAAAAATGTTATATATCAAATGATTGGATGATAATTACATACTCAATCAAACTTCATTCTCTAGAATAAAAGAGTCTTCCTCGCCATATAATACCGTTGGTTCCAATAATTTGGTCTATGACGAATATGATTAATGATTTTGAATTTTATTAGTGGGGTTTCTTTTTGTTGGTTACAAAATTTTATTAGTGGTTTTGAAATTTTATTAGTGGTTACAAAATTTTATTAGTGGATTATTCACTAACAAGAATTAACAATCAATTGATGATTCGCTCTAACAAAAACTTACAACTTCCTTAGTTTTCTAATAAGCAAAAAACATTTAATCAATAAGGCAAATGATTTTTTAATATCATAAAAAATATTTATATTTTTCAAAGTTTCATTCATGAAAACTTATCTCGTGGAAATAAAAGAATAGTCGAACAAAAGTTTATAATAATTTCCTCTAAAAAAATTATATTAATTGTGAGGTTTTCTAAGAATTGCATTATTAAATTAAATAGAATGAAAGTAGTTAAATGTGTTTATATAAAATAATGAGAAAGGAATTTTTTTTTTTTTAATAAAAGTAATGTCAATGATCATTTTATGATGTCTTTTATATTTGAACTTCCTTTGTTAAAATTACAATCTCGAATTCTTGTTGGTTGAACTAACATGTCAAGTAGTACTTGGTGTTTTTTTTTTCTTTTTCTTTTTCTTATGTTGATACTTGATACCAATAGAATACATTGGGCTTTATGCATCGTGAAGTAATACTAATTGAATTAAATCCCTCTTTATGTTAATTATTATTAGGTGCAAAGAAGTGTAGAAGACCCGAGCATATTAGTGACCACATACGAAGGAGAGCACAACCATGCGCATCACCAACCTGAAATGTCACTCACTAGTTCAAACCAAAGTGAAACAACCCCTACATATAATTTAGTTCCAGCATCCTCATCCTCACCAATTAATTGGCGTACAGCTCAAGCTTCAGAGCTTGACTTGGTCCAGCCAAGAAAATTGGTAGTTGATGATTCTCATAAGTCGTCTATCCAGCAGTTATTAGTTCAACAGATGGCTACTTCTTTGACAAGAGATCCTAATTTCGCAACAGCACTTGCCACTGCCATTTCTGGAAGAATAATTCTGGATGTGGAAAAGCCGAAGTGA
Protein sequence

>MS.gene80192.t1

MEPTCVDTSLNLNTLPSRDTPVSAVADQVLVEELKRLSSENKRLTEKLNHMCDNYTALRKHLSQFSHTKFENELVSPISRKRKAESVENCINRFGYAIAESSTITTEEETFKHNNMTSPRVSKVLVRTDASNASLYVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPGCPVKKKVQRSVEDPSILVTTYEGEHNHAHHQPEMSLTSSNQSETTPTYNLVPASSSSPINWRTAQASELDLVQPRKLVVDDSHKSSIQQLLVQQMATSLTRDPNFATALATAISGRIILDVEKPK