AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80203

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80203.t1 MTR_3g106220 98.295 645 11 0 1 645 1 645 0.0 1315
MS.gene80203.t1 MTR_1g013170 50.089 559 175 15 6 548 3 473 1.13e-150 445
MS.gene80203.t1 MTR_2g450070 39.628 699 331 17 6 642 16 685 6.00e-135 411
MS.gene80203.t1 MTR_2g450070 46.906 501 221 9 6 483 16 494 8.26e-130 397
MS.gene80203.t1 MTR_1g013180 54.756 431 149 13 6 413 154 561 4.38e-128 393
MS.gene80203.t1 MTR_1g013180 32.394 213 91 11 434 632 501 674 2.30e-11 67.4
MS.gene80203.t1 MTR_7g117705 59.184 343 102 6 6 338 3 317 2.53e-117 358
MS.gene80203.t1 MTR_2g034960 48.747 359 149 7 6 357 27 357 6.17e-100 318
MS.gene80203.t1 MTR_1g032570 55.290 293 119 3 4 286 7 297 8.43e-98 313
MS.gene80203.t1 MTR_4g121020 57.565 271 83 3 6 263 29 280 3.53e-97 313
MS.gene80203.t1 MTR_4g121020 57.565 271 83 3 6 263 29 280 3.65e-97 313
MS.gene80203.t1 MTR_4g131580 41.483 499 260 11 2 489 11 488 1.68e-96 309
MS.gene80203.t1 MTR_4g131600 50.000 334 146 5 5 330 17 337 9.10e-93 298
MS.gene80203.t1 MTR_4g131570 51.064 329 145 4 8 328 17 337 2.55e-92 297
MS.gene80203.t1 MTR_3g086100 53.289 304 115 5 8 310 13 290 3.86e-91 293
MS.gene80203.t1 MTR_3g102590 61.011 277 48 5 1 273 1 221 1.27e-90 281
MS.gene80203.t1 MTR_8g079940 56.343 268 95 4 6 265 23 276 7.78e-89 286
MS.gene80203.t1 MTR_3g102590 59.677 248 43 3 1 247 1 192 2.86e-78 247
MS.gene80203.t1 MTR_1g032570 55.217 230 91 3 67 286 1 228 2.31e-71 241
MS.gene80203.t1 MTR_3g102600 83.459 133 22 0 1 133 1 133 4.66e-69 223
MS.gene80203.t1 MTR_3g102600 73.585 53 14 0 197 249 131 183 1.74e-20 90.1
MS.gene80203.t1 MTR_3g102600 83.459 133 22 0 1 133 1 133 7.98e-68 221
MS.gene80203.t1 MTR_3g102600 60.870 115 21 1 197 311 131 221 1.65e-39 145
MS.gene80203.t1 MTR_3g086100 51.837 245 91 5 67 310 1 219 6.67e-64 219
MS.gene80203.t1 MTR_4g021760 41.270 252 116 4 3 254 6 225 6.80e-52 181
MS.gene80203.t1 MTR_1g013160 63.399 153 50 2 70 221 1 148 8.27e-51 173
MS.gene80203.t1 MTR_4g121020 50.000 190 63 3 87 263 6 176 9.82e-49 180
MS.gene80203.t1 MTR_4g021790 39.516 248 118 3 8 255 10 225 1.70e-47 168
MS.gene80203.t1 MTR_4g021855 38.306 248 121 4 8 255 10 225 1.08e-45 164
MS.gene80203.t1 MTR_4g021845 38.750 240 115 3 8 247 10 217 1.12e-45 162
MS.gene80203.t1 MTR_3g102600 82.143 84 15 0 50 133 1 84 1.50e-42 150
MS.gene80203.t1 MTR_3g102600 73.585 53 14 0 197 249 82 134 2.53e-21 90.9
MS.gene80203.t1 MTR_0450s0040 36.179 246 130 3 12 256 8 227 2.93e-42 156
MS.gene80203.t1 MTR_3g102600 82.143 84 15 0 50 133 1 84 9.88e-41 147
MS.gene80203.t1 MTR_3g102600 60.345 116 22 1 197 312 82 173 1.02e-39 144
MS.gene80203.t1 MTR_8g105600 36.630 273 159 5 5 276 6 265 1.77e-39 153
MS.gene80203.t1 MTR_6g045327 36.078 255 129 5 1 254 7 228 4.17e-38 145
MS.gene80203.t1 MTR_7g026400 36.771 223 121 3 35 257 14 216 2.99e-36 144
MS.gene80203.t1 MTR_5g055260 34.274 248 104 8 8 255 10 198 5.05e-30 119
MS.gene80203.t1 MTR_8g032710 29.297 256 161 6 11 250 20 271 1.86e-25 110
MS.gene80203.t1 MTR_3g092780 31.677 161 98 3 12 161 56 215 5.34e-23 104
MS.gene80203.t1 MTR_3g092780 31.677 161 98 3 12 161 56 215 6.35e-23 103
MS.gene80203.t1 MTR_3g092780 37.097 124 73 2 12 131 56 178 1.28e-22 103
MS.gene80203.t1 MTR_3g092780 37.097 124 73 2 12 131 56 178 1.52e-22 102
MS.gene80203.t1 MTR_4g064730 46.667 105 53 1 164 265 94 198 4.59e-22 97.8
MS.gene80203.t1 MTR_4g023980 32.934 167 81 3 58 224 39 174 1.03e-21 93.2
MS.gene80203.t1 MTR_7g118260 32.039 206 115 5 1 198 1 189 2.01e-21 99.0
MS.gene80203.t1 MTR_6g016850 33.548 155 96 4 5 157 6 155 2.10e-21 92.0
MS.gene80203.t1 MTR_1g067110 37.705 122 73 2 12 130 85 206 2.34e-21 99.4
MS.gene80203.t1 MTR_1g067110 37.705 122 73 2 12 130 85 206 2.36e-21 99.4
MS.gene80203.t1 MTR_7g118260 35.915 142 80 3 1 134 1 139 2.53e-21 98.6
MS.gene80203.t1 MTR_4g061360 39.344 122 71 1 12 130 89 210 2.87e-21 99.4
MS.gene80203.t1 MTR_8g093040 36.923 130 82 0 1 130 7 136 3.34e-21 94.4
MS.gene80203.t1 MTR_7g089010 56.000 75 32 1 186 259 78 152 6.69e-21 94.0
MS.gene80203.t1 MTR_8g024260 34.868 152 88 2 14 162 38 181 1.03e-20 97.1
MS.gene80203.t1 MTR_6g453220 66.667 75 24 1 214 287 379 453 2.17e-20 95.5
MS.gene80203.t1 MTR_3g037390 34.677 124 78 1 12 132 24 147 2.30e-19 92.4
MS.gene80203.t1 MTR_4g108880 33.582 134 84 2 4 132 23 156 8.94e-18 87.4
MS.gene80203.t1 MTR_2g090675 45.455 88 48 0 178 265 141 228 1.03e-17 86.3
MS.gene80203.t1 MTR_4g078810 50.685 73 36 0 193 265 153 225 1.10e-17 86.3
MS.gene80203.t1 MTR_5g014040 56.061 66 29 0 191 256 304 369 1.29e-17 87.0
MS.gene80203.t1 MTR_5g014040 37.097 124 74 2 8 130 14 134 2.34e-13 73.6
MS.gene80203.t1 MTR_4g098870 60.656 61 24 0 196 256 308 368 3.97e-17 85.5
MS.gene80203.t1 MTR_4g098870 33.065 124 79 2 8 130 14 134 7.10e-12 68.9
MS.gene80203.t1 MTR_4g098870 60.656 61 24 0 196 256 328 388 4.41e-17 85.5
MS.gene80203.t1 MTR_4g098870 33.065 124 79 2 8 130 34 154 9.94e-12 68.6
MS.gene80203.t1 MTR_4g098870 60.656 61 24 0 196 256 308 368 4.76e-17 85.1
MS.gene80203.t1 MTR_4g098870 33.065 124 79 2 8 130 14 134 1.68e-11 67.8
MS.gene80203.t1 MTR_4g098870 60.656 61 24 0 196 256 347 407 5.09e-17 85.1
MS.gene80203.t1 MTR_4g098870 33.065 124 79 2 8 130 53 173 1.23e-11 68.2
MS.gene80203.t1 MTR_4g098870 60.656 61 24 0 196 256 328 388 5.10e-17 85.1
MS.gene80203.t1 MTR_4g098870 33.065 124 79 2 8 130 34 154 2.02e-11 67.4
MS.gene80203.t1 MTR_3g084390 48.101 79 31 2 1 69 1 79 9.08e-16 73.2
MS.gene80203.t1 MTR_5g014040 52.113 71 29 1 191 256 264 334 1.08e-15 80.9
MS.gene80203.t1 MTR_5g014040 52.113 71 29 1 191 256 304 374 1.28e-15 80.5
MS.gene80203.t1 MTR_5g014040 37.097 124 74 2 8 130 14 134 2.54e-13 73.6
MS.gene80203.t1 MTR_5g017980 39.516 124 64 4 197 318 191 305 6.82e-15 76.6
MS.gene80203.t1 MTR_5g017980 39.516 124 64 4 197 318 192 306 7.28e-15 76.6
MS.gene80203.t1 MTR_4g086835 38.679 106 50 2 197 298 273 367 6.39e-14 74.7
MS.gene80203.t1 MTR_5g017980 39.200 125 64 5 197 318 192 307 7.27e-14 73.6
MS.gene80203.t1 MTR_7g115530 62.500 56 20 1 196 250 216 271 1.27e-13 72.4
MS.gene80203.t1 MTR_6g088950 25.843 178 123 2 10 178 5 182 1.83e-13 70.5
MS.gene80203.t1 MTR_1g093080 45.679 81 42 2 191 269 204 284 1.93e-13 72.8
MS.gene80203.t1 MTR_7g115530 62.500 56 20 1 196 250 216 271 2.02e-13 72.4
MS.gene80203.t1 MTR_7g115530 62.500 56 20 1 196 250 216 271 2.85e-13 72.0
MS.gene80203.t1 MTR_7g115530 62.500 56 20 1 196 250 216 271 4.51e-13 72.0
MS.gene80203.t1 MTR_1g080330 56.897 58 24 1 194 250 171 228 7.56e-13 70.1
MS.gene80203.t1 MTR_1g080330 56.897 58 24 1 194 250 171 228 1.16e-12 70.5
MS.gene80203.t1 MTR_5g054300 40.230 87 50 2 185 270 186 271 1.74e-12 69.7
MS.gene80203.t1 MTR_4g086835 38.318 107 50 3 197 298 273 368 1.84e-12 70.1
MS.gene80203.t1 MTR_5g041350 50.847 59 28 1 194 251 11 69 1.94e-11 66.6
MS.gene80203.t1 MTR_4g113140 48.387 62 31 1 197 257 234 295 4.89e-11 65.9
MS.gene80203.t1 MTR_2g086450 49.153 59 29 1 194 251 41 99 9.01e-11 64.7
MS.gene80203.t1 MTR_6g032990 49.153 59 29 1 194 251 38 96 9.33e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80203.t1 AT2G25180 52.752 436 155 13 6 419 11 417 4.93e-128 390
MS.gene80203.t1 AT4G31920 53.117 369 109 9 6 355 11 334 2.79e-109 340
MS.gene80203.t1 AT3G16857 55.674 282 93 5 8 266 33 305 1.25e-94 306
MS.gene80203.t1 AT3G16857 55.674 282 93 5 8 266 33 305 2.52e-94 305
MS.gene80203.t1 AT5G58080 49.319 367 145 9 2 349 8 352 4.43e-92 298
MS.gene80203.t1 AT2G01760 56.538 260 110 3 6 262 5 264 4.13e-86 275
MS.gene80203.t1 AT1G67710 57.769 251 97 4 9 256 8 252 6.78e-82 268
MS.gene80203.t1 AT2G01760 51.042 288 110 4 6 262 5 292 4.91e-80 259
MS.gene80203.t1 AT3G16857 54.733 243 78 5 47 266 2 235 3.01e-75 253
MS.gene80203.t1 AT2G01760 54.774 199 87 3 67 262 1 199 2.13e-56 194
MS.gene80203.t1 AT1G67710 57.513 193 73 4 67 256 1 187 3.28e-55 195
MS.gene80203.t1 AT5G49240 39.167 240 141 2 8 247 38 272 1.76e-51 180
MS.gene80203.t1 AT3G62670 37.091 275 144 6 2 267 31 285 5.16e-42 157
MS.gene80203.t1 AT1G67710 52.601 173 73 4 87 256 12 178 5.33e-41 155
MS.gene80203.t1 AT1G49190 35.547 256 150 5 7 255 29 276 6.71e-40 151
MS.gene80203.t1 AT5G07210 29.683 347 197 10 10 328 14 341 2.02e-34 139
MS.gene80203.t1 AT5G07210 29.014 355 197 11 10 328 14 349 4.52e-32 132
MS.gene80203.t1 AT2G27070 30.576 278 154 8 10 256 14 283 3.95e-28 119
MS.gene80203.t1 AT2G46790 36.082 194 99 6 12 185 37 225 1.85e-25 110
MS.gene80203.t1 AT2G46790 36.082 194 99 6 12 185 37 225 2.53e-25 110
MS.gene80203.t1 AT1G49190 39.200 125 76 0 7 131 29 153 4.04e-25 110
MS.gene80203.t1 AT5G24470 35.294 170 94 5 6 168 42 202 1.37e-23 105
MS.gene80203.t1 AT5G59570 55.172 87 36 2 180 263 120 206 4.25e-23 100
MS.gene80203.t1 AT5G59570 55.172 87 36 2 180 263 120 206 4.25e-23 100
MS.gene80203.t1 AT3G46640 52.381 84 40 0 182 265 128 211 9.95e-23 100
MS.gene80203.t1 AT3G46640 52.381 84 40 0 182 265 128 211 9.95e-23 100
MS.gene80203.t1 AT3G46640 53.086 81 38 0 182 262 128 208 1.50e-22 99.8
MS.gene80203.t1 AT1G68210 26.937 271 171 4 12 257 13 281 5.17e-22 101
MS.gene80203.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.29e-21 98.2
MS.gene80203.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.29e-21 98.2
MS.gene80203.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.29e-21 98.2
MS.gene80203.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.92e-21 98.6
MS.gene80203.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.92e-21 98.6
MS.gene80203.t1 AT5G60100 37.795 127 75 2 8 130 59 185 1.92e-21 98.6
MS.gene80203.t1 AT5G60100 37.795 127 75 2 8 130 59 185 4.29e-21 97.8
MS.gene80203.t1 AT2G40970 65.000 60 21 0 197 256 104 163 8.68e-21 92.8
MS.gene80203.t1 AT5G05090 65.000 60 21 0 197 256 80 139 1.14e-20 92.8
MS.gene80203.t1 AT3G10760 65.000 60 21 0 197 256 104 163 1.17e-20 94.4
MS.gene80203.t1 AT5G02810 38.525 122 72 1 12 130 78 199 1.51e-20 96.7
MS.gene80203.t1 AT5G44190 59.155 71 29 0 196 266 145 215 3.70e-20 92.8
MS.gene80203.t1 AT5G44190 59.155 71 29 0 196 266 145 215 4.66e-20 93.2
MS.gene80203.t1 AT5G61380 34.677 124 78 1 12 132 19 142 6.53e-19 91.3
MS.gene80203.t1 AT2G20570 43.878 98 51 1 159 256 118 211 2.19e-17 85.5
MS.gene80203.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.23e-16 82.4
MS.gene80203.t1 AT4G18020 34.559 136 80 3 6 134 12 145 3.38e-13 72.8
MS.gene80203.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.23e-16 82.4
MS.gene80203.t1 AT4G18020 34.559 136 80 3 6 134 12 145 3.38e-13 72.8
MS.gene80203.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.23e-16 82.4
MS.gene80203.t1 AT4G18020 34.559 136 80 3 6 134 12 145 3.38e-13 72.8
MS.gene80203.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.23e-16 82.4
MS.gene80203.t1 AT4G18020 34.559 136 80 3 6 134 12 145 3.38e-13 72.8
MS.gene80203.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.23e-16 82.4
MS.gene80203.t1 AT4G18020 34.559 136 80 3 6 134 12 145 3.38e-13 72.8
MS.gene80203.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.23e-16 82.4
MS.gene80203.t1 AT4G18020 34.559 136 80 3 6 134 12 145 3.38e-13 72.8
MS.gene80203.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.53e-16 82.4
MS.gene80203.t1 AT4G18020 34.559 136 80 3 6 134 12 145 4.93e-13 72.4
MS.gene80203.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.53e-16 82.4
MS.gene80203.t1 AT4G18020 34.559 136 80 3 6 134 12 145 4.93e-13 72.4
MS.gene80203.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.53e-16 82.4
MS.gene80203.t1 AT4G18020 34.559 136 80 3 6 134 12 145 4.93e-13 72.4
MS.gene80203.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.53e-16 82.4
MS.gene80203.t1 AT4G18020 34.559 136 80 3 6 134 12 145 4.93e-13 72.4
MS.gene80203.t1 AT4G18020 41.748 103 53 1 161 256 252 354 3.53e-16 82.4
MS.gene80203.t1 AT4G18020 34.559 136 80 3 6 134 12 145 4.93e-13 72.4
MS.gene80203.t1 AT2G20570 61.404 57 22 0 200 256 171 227 5.82e-16 81.3
MS.gene80203.t1 AT1G68670 31.818 154 90 4 181 333 198 337 7.30e-13 70.9
MS.gene80203.t1 AT4G13640 42.708 96 39 3 198 282 37 127 2.86e-12 68.6
MS.gene80203.t1 AT4G13640 42.708 96 39 3 198 282 37 127 2.99e-12 68.2
MS.gene80203.t1 AT1G49560 38.182 110 61 3 195 298 189 297 7.47e-12 67.8
MS.gene80203.t1 AT3G24120 42.105 95 39 3 198 281 41 130 1.22e-11 66.6
MS.gene80203.t1 AT3G24120 42.105 95 39 3 198 281 41 130 1.24e-11 66.6
MS.gene80203.t1 AT1G25550 51.667 60 28 1 197 255 208 267 1.42e-11 67.0
MS.gene80203.t1 AT3G04030 50.847 59 28 1 194 251 41 99 3.04e-11 66.2
MS.gene80203.t1 AT3G04030 50.847 59 28 1 194 251 41 99 3.54e-11 65.9
MS.gene80203.t1 AT2G03500 46.875 64 33 1 195 257 230 293 3.58e-11 66.2
MS.gene80203.t1 AT4G37180 49.180 61 30 1 196 255 208 268 4.52e-11 65.5
MS.gene80203.t1 AT4G37180 49.180 61 30 1 196 255 215 275 5.84e-11 65.1
MS.gene80203.t1 AT4G00760 27.670 206 121 8 30 215 1 198 7.65e-11 64.7
MS.gene80203.t1 AT1G10470 32.061 131 77 2 14 132 22 152 8.15e-11 63.2
MS.gene80203.t1 AT1G10470 32.061 131 77 2 14 132 36 166 8.87e-11 63.5

Find 163 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGATCCGGGAATTTATT+TGG 0.160454 3.4:+92677617 None:intergenic
GCAAGATAAGATGAAATTAT+TGG 0.247006 3.4:-92676317 MS.gene80203:CDS
TCCAACTTGTCTCATGGTTT+TGG 0.250920 3.4:-92680262 MS.gene80203:CDS
TCAAGCGACGTACCGTTATC+TGG 0.285277 3.4:-92677398 MS.gene80203:CDS
ACATTTGGCAGCATGTAATT+AGG 0.295640 3.4:-92678766 MS.gene80203:CDS
TCCAGCATGCTTCATTTGTA+TGG 0.304531 3.4:+92677046 None:intergenic
ATTCCTTGGGAGTGCATATC+TGG 0.307526 3.4:+92677263 None:intergenic
TATTTGAGAATGGGTGGTTC+TGG 0.310707 3.4:-92677941 MS.gene80203:CDS
TTGAAGAGAAAGAATTTGTT+TGG 0.311046 3.4:+92677372 None:intergenic
CGTTAATCAGAATATTCTTC+AGG 0.324708 3.4:-92677738 MS.gene80203:CDS
TGAACTTGTGGGACTTGAAA+TGG 0.326717 3.4:-92679038 MS.gene80203:CDS
GCTAGTATGGTGGCAGCCTT+AGG 0.331673 3.4:-92677980 MS.gene80203:CDS
GCAGAAAATTCAGATGAAAA+TGG 0.333558 3.4:-92678653 MS.gene80203:CDS
GTTGATCCGGGAATTTATTT+GGG 0.335841 3.4:+92677618 None:intergenic
TCCCATCCCAAATAAATTCC+CGG 0.335864 3.4:-92677624 MS.gene80203:CDS
CCCTTGCAAGCGGGGTATCC+TGG 0.337535 3.4:-92677296 MS.gene80203:CDS
AATTGTTTAAATTACGTGAT+TGG 0.348210 3.4:+92677801 None:intergenic
GCAAAACTTGGCCGTTGATC+CGG 0.363698 3.4:+92677605 None:intergenic
AGAAGAAGCCTCGGGTTGTT+TGG 0.367984 3.4:-92678544 MS.gene80203:CDS
AACTCTCTTGCTCCAGTTAA+CGG 0.368682 3.4:-92677131 MS.gene80203:CDS
TAGAGGAGCTAAAGAACATT+TGG 0.372140 3.4:-92678781 MS.gene80203:CDS
CTGGAATTTAAGTTGATCAT+TGG 0.373200 3.4:+92677775 None:intergenic
TCCTTCGGGGCTTCTTCAGT+TGG 0.386130 3.4:-92677825 MS.gene80203:CDS
CTGAAGAATATTCTGATTAA+CGG 0.389124 3.4:+92677739 None:intergenic
TCTTGGTTCACTGGAATACT+TGG 0.389557 3.4:-92676946 MS.gene80203:CDS
AACGGTAATTTGCCATTTCA+AGG 0.393348 3.4:-92677212 MS.gene80203:CDS
CTGCCACCATACTAGCTTGT+TGG 0.395940 3.4:+92677987 None:intergenic
CGGTCTTCCCATCCTTGAAA+TGG 0.402240 3.4:+92677200 None:intergenic
GAAAGAAAACACGGAGGTAT+AGG 0.402851 3.4:-92677515 MS.gene80203:CDS
GCTGAAACCTGTGAGATTAG+AGG 0.402851 3.4:-92678798 MS.gene80203:CDS
AACACTCCAACTAGTCTTAA+CGG 0.404206 3.4:-92677860 MS.gene80203:CDS
TTCTAATAATCTTGGTTCAC+TGG 0.404941 3.4:-92676955 MS.gene80203:CDS
ATTCTGATTAACGGGAGTTA+TGG 0.410279 3.4:+92677748 None:intergenic
CCTTCGGGGCTTCTTCAGTT+GGG 0.414763 3.4:-92677824 MS.gene80203:CDS
CAAGATAAGATGAAATTATT+GGG 0.416183 3.4:-92676316 MS.gene80203:CDS
ATTTCAGTGTTGTCTGCATA+TGG 0.417968 3.4:-92678872 MS.gene80203:intron
CACGCATTCCGATGGGAAAA+CGG 0.428750 3.4:+92680304 None:intergenic
AAGGTAGGCACGGTGATAAT+TGG 0.437512 3.4:-92677421 MS.gene80203:CDS
CGAGGCTTCTTCTGAGCTGA+TGG 0.438400 3.4:+92678554 None:intergenic
AAACACGGAGGTATAGGAAT+AGG 0.439930 3.4:-92677509 MS.gene80203:CDS
TGCAAACCAACAAGCTAGTA+TGG 0.442595 3.4:-92677993 MS.gene80203:CDS
AGGTGGAGCTAGTTGTTGTC+TGG 0.446742 3.4:+92677090 None:intergenic
AGATCAATCTTATTTGAGAA+TGG 0.446802 3.4:-92677951 MS.gene80203:CDS
GAACTAGAGGTGGCAAAACT+TGG 0.447157 3.4:+92677593 None:intergenic
GTTGCTGCTGTTAATCAGTT+AGG 0.449852 3.4:-92678497 MS.gene80203:CDS
TGAAGAATATTCTGATTAAC+GGG 0.453613 3.4:+92677740 None:intergenic
GATCAATCTTATTTGAGAAT+GGG 0.453918 3.4:-92677950 MS.gene80203:CDS
ATCCGGGAATTTATTTGGGA+TGG 0.454627 3.4:+92677622 None:intergenic
AGCTTAAATCCATCCATGTC+AGG 0.455967 3.4:+92679064 None:intergenic
GGTAAGTAGCATCCTGATTA+CGG 0.456384 3.4:+92677180 None:intergenic
GACTAAGAAAAGAAAGGATC+AGG 0.456770 3.4:-92678624 MS.gene80203:CDS
GCTTCTTTGCCCTTGCAAGC+GGG 0.456904 3.4:-92677305 MS.gene80203:CDS
GGAGGTATAGGAATAGGATA+TGG 0.457148 3.4:-92677503 MS.gene80203:CDS
TGCTGGCTTATGATATTAGC+TGG 0.457220 3.4:+92676984 None:intergenic
GGCTTCTTTGCCCTTGCAAG+CGG 0.465152 3.4:-92677306 MS.gene80203:CDS
CAAAACTTGGCCGTTGATCC+GGG 0.465888 3.4:+92677606 None:intergenic
GAAGATGAGGATAAAGAGAA+TGG 0.467439 3.4:-92678593 MS.gene80203:CDS
AATTCACCTGAGTATATAAA+CGG 0.467724 3.4:-92677230 MS.gene80203:CDS
GAGCTAGTTGTTGTCTGGCC+TGG 0.468240 3.4:+92677095 None:intergenic
GATTATTAGAAAACTTCTGC+TGG 0.476268 3.4:+92676967 None:intergenic
TCCAAAACCATGAGACAAGT+TGG 0.479542 3.4:+92680261 None:intergenic
AATTATCCCACTAGGTGAAA+AGG 0.479567 3.4:+92677892 None:intergenic
ACACTCCAACTAGTCTTAAC+GGG 0.480069 3.4:-92677859 MS.gene80203:CDS
CGACGATCCAACTTGTCTCA+TGG 0.481091 3.4:-92680268 MS.gene80203:CDS
CCAGCATGCTTCATTTGTAT+GGG 0.481160 3.4:+92677047 None:intergenic
TTTAGCTCCTCTAATCTCAC+AGG 0.481770 3.4:+92678791 None:intergenic
AGGATGGGAAGACCGTAATC+AGG 0.483908 3.4:-92677192 MS.gene80203:CDS
TTTAAGCTGCTTGAACTTGT+GGG 0.484142 3.4:-92679049 MS.gene80203:CDS
ACCAGGATACCCCGCTTGCA+AGG 0.485505 3.4:+92677295 None:intergenic
TGTTTGAGATACCGAGACTT+GGG 0.488772 3.4:+92677564 None:intergenic
TCCGGGAATTTATTTGGGAT+GGG 0.491640 3.4:+92677623 None:intergenic
CCATGCCCGTTAAGACTAGT+TGG 0.492442 3.4:+92677854 None:intergenic
CAGGGAATGCCAATGTCCAT+AGG 0.498172 3.4:-92677719 MS.gene80203:CDS
CCCATACAAATGAAGCATGC+TGG 0.498373 3.4:-92677047 MS.gene80203:CDS
GTTAATCAGAATATTCTTCA+GGG 0.498546 3.4:-92677737 MS.gene80203:CDS
TCCGATGGGAAAACGGTCAC+CGG 0.502454 3.4:+92680311 None:intergenic
TCTTTCTCTATGCTGGATCA+AGG 0.503800 3.4:-92677440 MS.gene80203:CDS
GTAATTTGCCATTTCAAGGA+TGG 0.513037 3.4:-92677208 MS.gene80203:CDS
GAAGAAGAAGTCTGATCCAA+AGG 0.514805 3.4:-92678744 MS.gene80203:CDS
GACAAAACTACTTCTGATAG+TGG 0.516959 3.4:-92678698 MS.gene80203:CDS
GAACGTGGCAAGCCATCTCC+AGG 0.523004 3.4:-92678135 MS.gene80203:intron
TTTGTTTGGATTCCAGATAA+CGG 0.525042 3.4:+92677386 None:intergenic
ATTTAAGCTGCTTGAACTTG+TGG 0.531591 3.4:-92679050 MS.gene80203:CDS
ATACTTGGCGAGTTCAATGA+TGG 0.533419 3.4:-92676931 MS.gene80203:CDS
CTAGTATGGTGGCAGCCTTA+GGG 0.534344 3.4:-92677979 MS.gene80203:CDS
TGTTATTGCTTGACTAGTTG+TGG 0.534638 3.4:+92679150 None:intergenic
CTAGTTGTTGTCTGGCCTGG+TGG 0.535200 3.4:+92677098 None:intergenic
CTTCTTTGCCCTTGCAAGCG+GGG 0.537483 3.4:-92677304 MS.gene80203:CDS
TAATTTGCCATTTCAAGGAT+GGG 0.541605 3.4:-92677207 MS.gene80203:CDS
AAATTACCGTTTATATACTC+AGG 0.541639 3.4:+92677224 None:intergenic
GCCTCGGGTTGTTTGGTCTG+TGG 0.542268 3.4:-92678537 MS.gene80203:CDS
GGCAGTGGACTAAGATCCGC+AGG 0.543371 3.4:-92678677 MS.gene80203:CDS
TTGTTTGAGATACCGAGACT+TGG 0.548378 3.4:+92677563 None:intergenic
TAACGGGAGTTATGGCTGAC+TGG 0.548521 3.4:+92677756 None:intergenic
ACTACTTCTGATAGTGGCAG+TGG 0.549024 3.4:-92678692 MS.gene80203:CDS
TACCACTCAAATGTTACTTG+TGG 0.549615 3.4:-92677161 MS.gene80203:CDS
TGTGCACATCACTGATTACC+AGG 0.551505 3.4:+92679089 None:intergenic
CATCAGCTCAGAAGAAGCCT+CGG 0.554303 3.4:-92678553 MS.gene80203:CDS
GGCGAGAACACGCATTCCGA+TGG 0.558372 3.4:+92680296 None:intergenic
CCAGGATACCCCGCTTGCAA+GGG 0.561131 3.4:+92677296 None:intergenic
CAAATAAATTCCCGGATCAA+CGG 0.562184 3.4:-92677616 MS.gene80203:CDS
AGTCTCGGTATCTCAAACAA+TGG 0.562603 3.4:-92677560 MS.gene80203:CDS
CAGATAATCACAGGCACCAT+GGG 0.562735 3.4:+92678820 None:intergenic
GGCGAGTTCAATGATGGGAC+AGG 0.562860 3.4:-92676925 MS.gene80203:intron
CAATCTTATTTGAGAATGGG+TGG 0.565295 3.4:-92677947 MS.gene80203:CDS
GAGGCTTCTTCTGAGCTGAT+GGG 0.565647 3.4:+92678555 None:intergenic
AAAGCTGACTAAGAAAAGAA+AGG 0.566687 3.4:-92678630 MS.gene80203:CDS
AGGGAATGCCAATGTCCATA+GGG 0.567298 3.4:-92677718 MS.gene80203:CDS
TTGCAAGTGATCAAACCCTA+TGG 0.568247 3.4:+92677703 None:intergenic
TCTCTATGCTGGATCAAGGT+AGG 0.568314 3.4:-92677436 MS.gene80203:CDS
TGATCACTTGCAAAACAGCA+AGG 0.568375 3.4:-92677693 MS.gene80203:CDS
AGATTGATCTGCACTCCCTA+AGG 0.568615 3.4:+92677964 None:intergenic
GACAACAACTAGCTCCACCT+TGG 0.570450 3.4:-92677087 MS.gene80203:CDS
CTCAAACAATGGCTTGATGT+CGG 0.579465 3.4:-92677549 MS.gene80203:CDS
TGTTCCTCCTTCAGATAACA+TGG 0.580834 3.4:-92677327 MS.gene80203:CDS
ATCAGCTCAGAAGAAGCCTC+GGG 0.581453 3.4:-92678552 MS.gene80203:CDS
TATGCGATAATTACTCCGAC+GGG 0.584211 3.4:-92676282 MS.gene80203:CDS
AGATCCCCACTTACTTATGA+CGG 0.584541 3.4:+92679009 None:intergenic
CCAACTAGTCTTAACGGGCA+TGG 0.588692 3.4:-92677854 MS.gene80203:CDS
GTTTGAGATACCGAGACTTG+GGG 0.591845 3.4:+92677565 None:intergenic
GCAGATAATCACAGGCACCA+TGG 0.592029 3.4:+92678819 None:intergenic
TGATCAAACCCTATGGACAT+TGG 0.593062 3.4:+92677710 None:intergenic
TGCATATGGTGATACAAAGC+TGG 0.593897 3.4:-92678858 MS.gene80203:CDS
GATCCCCACTTACTTATGAC+GGG 0.593976 3.4:+92679010 None:intergenic
AGAAAATTCTGAATGTTGAG+AGG 0.594209 3.4:+92677460 None:intergenic
ATATGCGATAATTACTCCGA+CGG 0.598221 3.4:-92676283 MS.gene80203:CDS
GTGCACATGCCTGACATGGA+TGG 0.600433 3.4:-92679073 MS.gene80203:CDS
CCCAACTGAAGAAGCCCCGA+AGG 0.603189 3.4:+92677824 None:intergenic
AGATTACCAATTATCCCACT+AGG 0.605896 3.4:+92677884 None:intergenic
AAAGAAGCCATGTTATCTGA+AGG 0.609057 3.4:+92677320 None:intergenic
AGGTTTCAGCAGATAATCAC+AGG 0.609824 3.4:+92678811 None:intergenic
GATCACTTGCAAAACAGCAA+GGG 0.610593 3.4:-92677692 MS.gene80203:CDS
TGAGCTGCATTCAGTTAACT+CGG 0.614968 3.4:+92677019 None:intergenic
TGATGTGCACATGCCTGACA+TGG 0.615041 3.4:-92679077 MS.gene80203:CDS
TCAGGATGAAGACGAAGATG+AGG 0.615403 3.4:-92678606 MS.gene80203:CDS
ACAAGTTGGATCGTCGTCAA+CGG 0.615563 3.4:+92680275 None:intergenic
GCGAGAACACGCATTCCGAT+GGG 0.617268 3.4:+92680297 None:intergenic
GACCGTGGTATTGACATCTA+CGG 0.617438 3.4:+92680229 None:intergenic
ATATCTGGCAACGAACCACC+AGG 0.619562 3.4:+92677278 None:intergenic
TTGCCAGATATGCACTCCCA+AGG 0.620552 3.4:-92677266 MS.gene80203:CDS
ATGCTGGATCAAGGTAGGCA+CGG 0.622381 3.4:-92677431 MS.gene80203:CDS
GATAAGATGAAATTATTGGG+TGG 0.625103 3.4:-92676313 MS.gene80203:CDS
ATCCACAAGTAACATTTGAG+TGG 0.625700 3.4:+92677159 None:intergenic
CCCACTTACTTATGACGGGA+AGG 0.626480 3.4:+92679014 None:intergenic
GAAGCCATGTTATCTGAAGG+AGG 0.632238 3.4:+92677323 None:intergenic
GATACAAAGCTGGTGATGAA+AGG 0.634012 3.4:-92678848 MS.gene80203:CDS
AAATATCACAAGGGAGAACG+TGG 0.641409 3.4:-92678150 MS.gene80203:CDS
TACTTGGCGAGTTCAATGAT+GGG 0.644216 3.4:-92676930 MS.gene80203:CDS
TTGCAAGCGGGGTATCCTGG+TGG 0.644472 3.4:-92677293 MS.gene80203:CDS
TAACAGCAGCAACAAACTTG+CGG 0.664827 3.4:+92678507 None:intergenic
TCCACAGACCAAACAACCCG+AGG 0.670707 3.4:+92678536 None:intergenic
AAACAAAGACAAGTTTGACC+TGG 0.671629 3.4:-92679107 MS.gene80203:CDS
CTCCGTAGATGTCAATACCA+CGG 0.676022 3.4:-92680231 MS.gene80203:intron
TTTGAGATACCGAGACTTGG+GGG 0.680383 3.4:+92677566 None:intergenic
TGAATGTCGAAAATATCACA+AGG 0.689686 3.4:-92678160 MS.gene80203:CDS
GTGATGAAAGGAATTTCCCA+TGG 0.694201 3.4:-92678836 MS.gene80203:CDS
ACGCACCCTGAAAGAAAACA+CGG 0.699020 3.4:-92677524 MS.gene80203:CDS
AAACCAACAAGCTAGTATGG+TGG 0.708833 3.4:-92677990 MS.gene80203:CDS
GAATGTCGAAAATATCACAA+GGG 0.725612 3.4:-92678159 MS.gene80203:CDS
CTGTCACAAAGATACCCCGT+CGG 0.726754 3.4:+92676267 None:intergenic
ATGCGATAATTACTCCGACG+GGG 0.780483 3.4:-92676281 MS.gene80203:CDS
AGAGAATGGTAATGACAACG+AGG 0.788270 3.4:-92678579 MS.gene80203:CDS
CACCCTGAAAGAAAACACGG+AGG 0.809478 3.4:-92677521 MS.gene80203:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATTTGAATTTC+TGG + chr3.4:92676551-92676570 None:intergenic 10.0%
!! ATAAAAAAAAACATGTCTTT+AGG - chr3.4:92676560-92676579 MS.gene80203:intron 15.0%
!! ATTAAAAAATTTAGTATCCA+AGG + chr3.4:92679524-92679543 None:intergenic 15.0%
!! TCAAAATGAATAAATAGAAA+AGG + chr3.4:92677641-92677660 None:intergenic 15.0%
!! TGAAATTTGAAGATTTAAAT+TGG - chr3.4:92679935-92679954 MS.gene80203:intron 15.0%
!!! ACATTTTTTGAATATAATGT+TGG - chr3.4:92679694-92679713 MS.gene80203:intron 15.0%
!!! ATATATTTCATTTTGTTTAG+TGG - chr3.4:92676995-92677014 MS.gene80203:CDS 15.0%
!!! ATCATATCAAGAATTTTTTT+GGG + chr3.4:92678412-92678431 None:intergenic 15.0%
!! AAGAAAAAAATTAACAGTTG+AGG + chr3.4:92677618-92677637 None:intergenic 20.0%
!! AAGAACATCAATGAAATATA+TGG + chr3.4:92679991-92680010 None:intergenic 20.0%
!! AATTAGTAAAAATCATTCCT+TGG + chr3.4:92679345-92679364 None:intergenic 20.0%
!! AATTGTTTAAATTACGTGAT+TGG + chr3.4:92678793-92678812 None:intergenic 20.0%
!! AATTTGAAGATTTAAATTGG+TGG - chr3.4:92679938-92679957 MS.gene80203:intron 20.0%
!! ATAATACTCAAATTCAGTAA+TGG + chr3.4:92678356-92678375 None:intergenic 20.0%
!! ATATCTAGTAAAAATATGCT+TGG + chr3.4:92676897-92676916 None:intergenic 20.0%
!! ATTAACACCAAAACAAAAAA+TGG + chr3.4:92677051-92677070 None:intergenic 20.0%
!! ATTAGTAAAAATCATTCCTT+GGG + chr3.4:92679344-92679363 None:intergenic 20.0%
!! CAAGATAAGATGAAATTATT+GGG - chr3.4:92680275-92680294 MS.gene80203:CDS 20.0%
!! TATAATCTAATCAGTATATG+TGG + chr3.4:92679816-92679835 None:intergenic 20.0%
!!! CAATTTTTACAGATTTTATG+TGG - chr3.4:92676761-92676780 MS.gene80203:intron 20.0%
!!! CATCATATCAAGAATTTTTT+TGG + chr3.4:92678413-92678432 None:intergenic 20.0%
!!! CATGTTGTTTTATTTAACTT+AGG - chr3.4:92680136-92680155 MS.gene80203:intron 20.0%
!!! TATTTTTACTAGATATGTGA+AGG - chr3.4:92676901-92676920 MS.gene80203:intron 20.0%
!!! TCAAAATGTTTTTGAATATC+TGG - chr3.4:92678217-92678236 MS.gene80203:intron 20.0%
!!! TGTATAGTTTTTTTTGCATA+TGG - chr3.4:92679753-92679772 MS.gene80203:intron 20.0%
! AAAAAATTTAGTATCCAAGG+TGG + chr3.4:92679521-92679540 None:intergenic 25.0%
! AAATTACCGTTTATATACTC+AGG + chr3.4:92679370-92679389 None:intergenic 25.0%
! AACATGGTATCAAATTACTA+TGG + chr3.4:92680240-92680259 None:intergenic 25.0%
! AACGATATTGTGTAGATATT+TGG - chr3.4:92676620-92676639 MS.gene80203:intron 25.0%
! AATTCACCTGAGTATATAAA+CGG - chr3.4:92679361-92679380 MS.gene80203:intron 25.0%
! ACTATGGAAGCAAAATATTT+AGG + chr3.4:92680224-92680243 None:intergenic 25.0%
! ATAAAAATTGTTTGTGTTGC+AGG + chr3.4:92678145-92678164 None:intergenic 25.0%
! ATGAAAAGAGTCATGATTTA+GGG - chr3.4:92676668-92676687 MS.gene80203:intron 25.0%
! ATTTCTTTCACTGAATGTTT+CGG - chr3.4:92678521-92678540 MS.gene80203:CDS 25.0%
! CAAAGACAAGAAAAGAAAAA+TGG + chr3.4:92677251-92677270 None:intergenic 25.0%
! CTGAAGAATATTCTGATTAA+CGG + chr3.4:92678855-92678874 None:intergenic 25.0%
! GCAAGATAAGATGAAATTAT+TGG - chr3.4:92680274-92680293 MS.gene80203:CDS 25.0%
! GTTAATCAGAATATTCTTCA+GGG - chr3.4:92678854-92678873 MS.gene80203:CDS 25.0%
! TAAAGAACTAGAAAAATACC+TGG + chr3.4:92678477-92678496 None:intergenic 25.0%
! TAATGGAATACTTTATGACA+TGG + chr3.4:92678339-92678358 None:intergenic 25.0%
! TACTAATCATGAAGAAATAC+AGG + chr3.4:92677307-92677326 None:intergenic 25.0%
! TGAAGAATATTCTGATTAAC+GGG + chr3.4:92678854-92678873 None:intergenic 25.0%
! TGTTTCTTTATACTATCACA+GGG + chr3.4:92676743-92676762 None:intergenic 25.0%
!! AAGCAAAATATTTAGGACAA+GGG + chr3.4:92680217-92680236 None:intergenic 25.0%
!! AGATCAATCTTATTTGAGAA+TGG - chr3.4:92678640-92678659 MS.gene80203:CDS 25.0%
!! CAGAAGTTTTCTAATAATCT+TGG - chr3.4:92679628-92679647 MS.gene80203:intron 25.0%
!! GATCAATCTTATTTGAGAAT+GGG - chr3.4:92678641-92678660 MS.gene80203:CDS 25.0%
!! GGAACTTTTACTAAGAATAA+AGG - chr3.4:92676641-92676660 MS.gene80203:intron 25.0%
!! TTGAAGAGAAAGAATTTGTT+TGG + chr3.4:92679222-92679241 None:intergenic 25.0%
!! TTGTTTCTTTATACTATCAC+AGG + chr3.4:92676744-92676763 None:intergenic 25.0%
!!! AAACATTTGTTTTTCTATCC+TGG - chr3.4:92680080-92680099 MS.gene80203:intron 25.0%
!!! AAGTGATACTTATTTCTGAT+TGG - chr3.4:92677406-92677425 MS.gene80203:CDS 25.0%
!!! AATGATTTTAAGTCTTCTCT+CGG + chr3.4:92679902-92679921 None:intergenic 25.0%
!!! AGTGATACTTATTTCTGATT+GGG - chr3.4:92677407-92677426 MS.gene80203:CDS 25.0%
!!! CGATGTTTATTTTAAATCCT+AGG - chr3.4:92678242-92678261 MS.gene80203:intron 25.0%
!!! TCATAAGTCATTTTAAACCT+AGG + chr3.4:92678262-92678281 None:intergenic 25.0%
!!! TCATTTTGACTCTTGTTTAT+TGG - chr3.4:92677652-92677671 MS.gene80203:CDS 25.0%
AAAGCTGACTAAGAAAAGAA+AGG - chr3.4:92677961-92677980 MS.gene80203:CDS 30.0%
AAGTCAACACACTATGAATT+TGG + chr3.4:92676703-92676722 None:intergenic 30.0%
ACAACATGCTATATACTCAA+CGG + chr3.4:92680124-92680143 None:intergenic 30.0%
ACTTAATTATGTGCTTGCTT+GGG - chr3.4:92676863-92676882 MS.gene80203:intron 30.0%
AGAAAATTCTGAATGTTGAG+AGG + chr3.4:92679134-92679153 None:intergenic 30.0%
ATAAAATTCAGTAAAGCTCG+AGG + chr3.4:92678181-92678200 None:intergenic 30.0%
ATCCTATGTGAATGTTCTAA+AGG + chr3.4:92680058-92680077 None:intergenic 30.0%
CAAGGAAATAATGTTTGAGA+TGG + chr3.4:92679792-92679811 None:intergenic 30.0%
CGTTAATCAGAATATTCTTC+AGG - chr3.4:92678853-92678872 MS.gene80203:CDS 30.0%
GAAACATTCAGTGAAAGAAA+TGG + chr3.4:92678522-92678541 None:intergenic 30.0%
GAATGTCGAAAATATCACAA+GGG - chr3.4:92678432-92678451 MS.gene80203:intron 30.0%
GATAAGATGAAATTATTGGG+TGG - chr3.4:92680278-92680297 MS.gene80203:CDS 30.0%
GATGAAAAGAGTCATGATTT+AGG - chr3.4:92676667-92676686 MS.gene80203:intron 30.0%
GATTATTAGAAAACTTCTGC+TGG + chr3.4:92679627-92679646 None:intergenic 30.0%
GCAGAAAATTCAGATGAAAA+TGG - chr3.4:92677938-92677957 MS.gene80203:CDS 30.0%
TGAATGTCGAAAATATCACA+AGG - chr3.4:92678431-92678450 MS.gene80203:intron 30.0%
TTCATTGATGTTCTTTGTGA+TGG - chr3.4:92679996-92680015 MS.gene80203:intron 30.0%
TTCTAATAATCTTGGTTCAC+TGG - chr3.4:92679636-92679655 MS.gene80203:intron 30.0%
TTGACTATAACCAAGTGATT+GGG + chr3.4:92677228-92677247 None:intergenic 30.0%
TTTCTTTCACTGAATGTTTC+GGG - chr3.4:92678522-92678541 MS.gene80203:CDS 30.0%
TTTGTTTGGATTCCAGATAA+CGG + chr3.4:92679208-92679227 None:intergenic 30.0%
! AAGCAATGAAGCTCTAATTA+CGG + chr3.4:92676932-92676951 None:intergenic 30.0%
! AGAATTTTCTTTCTCTATGC+TGG - chr3.4:92679144-92679163 MS.gene80203:CDS 30.0%
! AGCAAAATATTTAGGACAAG+GGG + chr3.4:92680216-92680235 None:intergenic 30.0%
! GAAGCAAAATATTTAGGACA+AGG + chr3.4:92680218-92680237 None:intergenic 30.0%
! TAATTTGCCATTTCAAGGAT+GGG - chr3.4:92679384-92679403 MS.gene80203:intron 30.0%
! TTGTTTTCACATCAGTATTC+AGG + chr3.4:92678943-92678962 None:intergenic 30.0%
!! AATGTTTCGGGTTTATGAAA+TGG - chr3.4:92678534-92678553 MS.gene80203:CDS 30.0%
!! ATGATTTTAAGTCTTCTCTC+GGG + chr3.4:92679901-92679920 None:intergenic 30.0%
!! CTGGAATTTAAGTTGATCAT+TGG + chr3.4:92678819-92678838 None:intergenic 30.0%
!! CTTTAGGATCAAATCTAACT+GGG - chr3.4:92676576-92676595 MS.gene80203:intron 30.0%
!! GTGATACTTATTTCTGATTG+GGG - chr3.4:92677408-92677427 MS.gene80203:CDS 30.0%
!! TCTTTAGGATCAAATCTAAC+TGG - chr3.4:92676575-92676594 MS.gene80203:intron 30.0%
!! TTCACTGTTGCTTTCTTTAT+TGG - chr3.4:92677345-92677364 MS.gene80203:CDS 30.0%
!! TTCATTTTGTTTAGTGGCTT+TGG - chr3.4:92677001-92677020 MS.gene80203:CDS 30.0%
!! TTTGTTTTTCTATCCTGGAT+TGG - chr3.4:92680085-92680104 MS.gene80203:intron 30.0%
!!! TAATGTTGTTTTACTTGCAG+AGG - chr3.4:92678381-92678400 MS.gene80203:intron 30.0%
!!! TGGTCAACCATTTTTTGTTT+TGG - chr3.4:92677041-92677060 MS.gene80203:CDS 30.0%
AAACAAAGACAAGTTTGACC+TGG - chr3.4:92677484-92677503 MS.gene80203:CDS 35.0%
AAAGAAGCCATGTTATCTGA+AGG + chr3.4:92679274-92679293 None:intergenic 35.0%
AATATTCCGGAGTTTAGTCA+GGG - chr3.4:92677116-92677135 MS.gene80203:CDS 35.0%
AATTATCCCACTAGGTGAAA+AGG + chr3.4:92678702-92678721 None:intergenic 35.0%
ACAAATATAACCATGCTGAC+TGG + chr3.4:92679872-92679891 None:intergenic 35.0%
ACAAGTTATTGTACCAATCC+AGG + chr3.4:92680101-92680120 None:intergenic 35.0%
ACATTTGGCAGCATGTAATT+AGG - chr3.4:92677825-92677844 MS.gene80203:CDS 35.0%
ACTAGAAAAATACCTGGAGA+TGG + chr3.4:92678471-92678490 None:intergenic 35.0%
AGATTACCAATTATCCCACT+AGG + chr3.4:92678710-92678729 None:intergenic 35.0%
ATATGCGATAATTACTCCGA+CGG - chr3.4:92680308-92680327 MS.gene80203:CDS 35.0%
ATCCACAAGTAACATTTGAG+TGG + chr3.4:92679435-92679454 None:intergenic 35.0%
ATTCTGATTAACGGGAGTTA+TGG + chr3.4:92678846-92678865 None:intergenic 35.0%
ATTTAAGCTGCTTGAACTTG+TGG - chr3.4:92677541-92677560 MS.gene80203:CDS 35.0%
ATTTCAGTGTTGTCTGCATA+TGG - chr3.4:92677719-92677738 MS.gene80203:CDS 35.0%
CAAATAAATTCCCGGATCAA+CGG - chr3.4:92678975-92678994 MS.gene80203:intron 35.0%
CACTTAATTATGTGCTTGCT+TGG - chr3.4:92676862-92676881 MS.gene80203:intron 35.0%
CTAAAGGACATCGAAAGTTA+CGG + chr3.4:92680042-92680061 None:intergenic 35.0%
CTAATCAGTATATGTGGTCA+AGG + chr3.4:92679810-92679829 None:intergenic 35.0%
GAAATGAAATTCATCCCAAG+TGG + chr3.4:92678294-92678313 None:intergenic 35.0%
GAAGATGAGGATAAAGAGAA+TGG - chr3.4:92677998-92678017 MS.gene80203:CDS 35.0%
GACAAAACTACTTCTGATAG+TGG - chr3.4:92677893-92677912 MS.gene80203:CDS 35.0%
GACTAAGAAAAGAAAGGATC+AGG - chr3.4:92677967-92677986 MS.gene80203:CDS 35.0%
GATCAAATCTAACTGGGAAA+TGG - chr3.4:92676582-92676601 MS.gene80203:intron 35.0%
GTTGACTATAACCAAGTGAT+TGG + chr3.4:92677229-92677248 None:intergenic 35.0%
GTTGATCCGGGAATTTATTT+GGG + chr3.4:92678976-92678995 None:intergenic 35.0%
TAAAGTATGCAATGCTCGTT+TGG - chr3.4:92680170-92680189 MS.gene80203:intron 35.0%
TAATATTCCGGAGTTTAGTC+AGG - chr3.4:92677115-92677134 MS.gene80203:CDS 35.0%
TAGAGGAGCTAAAGAACATT+TGG - chr3.4:92677810-92677829 MS.gene80203:CDS 35.0%
TGACTAAACTCCGGAATATT+AGG + chr3.4:92677116-92677135 None:intergenic 35.0%
TGGACTGAATATGCACTTTA+TGG - chr3.4:92677021-92677040 MS.gene80203:CDS 35.0%
TTATGATGATAGATGCCACT+TGG - chr3.4:92678276-92678295 MS.gene80203:intron 35.0%
TTCCCATAAATGCTTCTGTA+TGG - chr3.4:92679719-92679738 MS.gene80203:intron 35.0%
TTTAAGCTGCTTGAACTTGT+GGG - chr3.4:92677542-92677561 MS.gene80203:CDS 35.0%
! AACGGTAATTTGCCATTTCA+AGG - chr3.4:92679379-92679398 MS.gene80203:intron 35.0%
! ACTGTTGTTGCTTAGATTTC+AGG - chr3.4:92677279-92677298 MS.gene80203:CDS 35.0%
! ATGAGCAACTTTTCCTACTA+CGG + chr3.4:92676967-92676986 None:intergenic 35.0%
! CAATCTTATTTGAGAATGGG+TGG - chr3.4:92678644-92678663 MS.gene80203:CDS 35.0%
! GTAATTTGCCATTTCAAGGA+TGG - chr3.4:92679383-92679402 MS.gene80203:intron 35.0%
! TACCACTCAAATGTTACTTG+TGG - chr3.4:92679430-92679449 MS.gene80203:intron 35.0%
! TATGATGATAGATGCCACTT+GGG - chr3.4:92678277-92678296 MS.gene80203:intron 35.0%
! TGTTATTGCTTGACTAGTTG+TGG + chr3.4:92677444-92677463 None:intergenic 35.0%
! TTTTCACCTAGTGGGATAAT+TGG - chr3.4:92678701-92678720 MS.gene80203:CDS 35.0%
!! AACACTCCAACTAGTCTTAA+CGG - chr3.4:92678731-92678750 MS.gene80203:CDS 35.0%
!! AAGCCATACAGAAGCATTTA+TGG + chr3.4:92679725-92679744 None:intergenic 35.0%
!! AGCCATACAGAAGCATTTAT+GGG + chr3.4:92679724-92679743 None:intergenic 35.0%
!! GTCCTTTAGAACATTCACAT+AGG - chr3.4:92680053-92680072 MS.gene80203:intron 35.0%
!!! AGTAGTTTTGTCTGGTTTAC+TGG + chr3.4:92677885-92677904 None:intergenic 35.0%
!!! CTATCAGAAGTAGTTTTGTC+TGG + chr3.4:92677893-92677912 None:intergenic 35.0%
!!! CTGGTTTTGTTTTTCTCCTT+TGG + chr3.4:92677866-92677885 None:intergenic 35.0%
!!! GTCTTTGTTTTCTCTCAACA+TGG + chr3.4:92677474-92677493 None:intergenic 35.0%
AAACCAACAAGCTAGTATGG+TGG - chr3.4:92678601-92678620 MS.gene80203:CDS 40.0%
AAATATCACAAGGGAGAACG+TGG - chr3.4:92678441-92678460 MS.gene80203:intron 40.0%
AACTCTCTTGCTCCAGTTAA+CGG - chr3.4:92679460-92679479 MS.gene80203:intron 40.0%
AGATCCCCACTTACTTATGA+CGG + chr3.4:92677585-92677604 None:intergenic 40.0%
AGCTTAAATCCATCCATGTC+AGG + chr3.4:92677530-92677549 None:intergenic 40.0%
AGGTTTCAGCAGATAATCAC+AGG + chr3.4:92677783-92677802 None:intergenic 40.0%
AGTCTCGGTATCTCAAACAA+TGG - chr3.4:92679031-92679050 MS.gene80203:CDS 40.0%
ATACTTGGCGAGTTCAATGA+TGG - chr3.4:92679660-92679679 MS.gene80203:intron 40.0%
ATCCGGGAATTTATTTGGGA+TGG + chr3.4:92678972-92678991 None:intergenic 40.0%
CCAGCATGCTTCATTTGTAT+GGG + chr3.4:92679547-92679566 None:intergenic 40.0%
CGAAAGTTACGGTGGTTAAT+TGG + chr3.4:92680031-92680050 None:intergenic 40.0%
CGTTGATCCGGGAATTTATT+TGG + chr3.4:92678977-92678996 None:intergenic 40.0%
CTAAACTCCGGAATATTAGG+AGG + chr3.4:92677113-92677132 None:intergenic 40.0%
CTCAAACAATGGCTTGATGT+CGG - chr3.4:92679042-92679061 MS.gene80203:CDS 40.0%
GAAGAAGAAGTCTGATCCAA+AGG - chr3.4:92677847-92677866 MS.gene80203:CDS 40.0%
GATCACTTGCAAAACAGCAA+GGG - chr3.4:92678899-92678918 MS.gene80203:intron 40.0%
GGTAAGTAGCATCCTGATTA+CGG + chr3.4:92679414-92679433 None:intergenic 40.0%
GTGATGAAAGGAATTTCCCA+TGG - chr3.4:92677755-92677774 MS.gene80203:CDS 40.0%
GTTGCTGCTGTTAATCAGTT+AGG - chr3.4:92678094-92678113 MS.gene80203:intron 40.0%
TAACAGCAGCAACAAACTTG+CGG + chr3.4:92678087-92678106 None:intergenic 40.0%
TACTTGGCGAGTTCAATGAT+GGG - chr3.4:92679661-92679680 MS.gene80203:intron 40.0%
TAGAGCTTCATTGCTTGTAG+AGG - chr3.4:92676936-92676955 MS.gene80203:CDS 40.0%
TATGCGATAATTACTCCGAC+GGG - chr3.4:92680309-92680328 MS.gene80203:CDS 40.0%
TATTTGAGAATGGGTGGTTC+TGG - chr3.4:92678650-92678669 MS.gene80203:CDS 40.0%
TCCAAAACCATGAGACAAGT+TGG + chr3.4:92676333-92676352 None:intergenic 40.0%
TCCAGCATGCTTCATTTGTA+TGG + chr3.4:92679548-92679567 None:intergenic 40.0%
TCCCATCCCAAATAAATTCC+CGG - chr3.4:92678967-92678986 MS.gene80203:intron 40.0%
TCTAACTGGGAAATGGAGTT+AGG - chr3.4:92676589-92676608 MS.gene80203:intron 40.0%
TCTTGGTTCACTGGAATACT+TGG - chr3.4:92679645-92679664 MS.gene80203:intron 40.0%
TCTTTCTCTATGCTGGATCA+AGG - chr3.4:92679151-92679170 MS.gene80203:CDS 40.0%
TGAACTTGTGGGACTTGAAA+TGG - chr3.4:92677553-92677572 MS.gene80203:CDS 40.0%
TGAGCTGCATTCAGTTAACT+CGG + chr3.4:92679575-92679594 None:intergenic 40.0%
TGATCAAACCCTATGGACAT+TGG + chr3.4:92678884-92678903 None:intergenic 40.0%
TGATCACTTGCAAAACAGCA+AGG - chr3.4:92678898-92678917 MS.gene80203:intron 40.0%
TGATTGGGATCAAGAGGTTA+AGG + chr3.4:92677213-92677232 None:intergenic 40.0%
TGCAAACCAACAAGCTAGTA+TGG - chr3.4:92678598-92678617 MS.gene80203:CDS 40.0%
TGCATATGGTGATACAAAGC+TGG - chr3.4:92677733-92677752 MS.gene80203:CDS 40.0%
TGTTCCTCCTTCAGATAACA+TGG - chr3.4:92679264-92679283 MS.gene80203:intron 40.0%
TTGCAAGTGATCAAACCCTA+TGG + chr3.4:92678891-92678910 None:intergenic 40.0%
! AAACACGGAGGTATAGGAAT+AGG - chr3.4:92679082-92679101 MS.gene80203:CDS 40.0%
! AGAGAATGGTAATGACAACG+AGG - chr3.4:92678012-92678031 MS.gene80203:CDS 40.0%
! ATACCTCCGTGTTTTCTTTC+AGG + chr3.4:92679076-92679095 None:intergenic 40.0%
! ATCTGAATTTTCTGCTCCTG+CGG + chr3.4:92677933-92677952 None:intergenic 40.0%
! GAAAGAAAACACGGAGGTAT+AGG - chr3.4:92679076-92679095 MS.gene80203:CDS 40.0%
! GAGTCATGATTTAGGGTCAA+AGG - chr3.4:92676675-92676694 MS.gene80203:intron 40.0%
! GATACAAAGCTGGTGATGAA+AGG - chr3.4:92677743-92677762 MS.gene80203:CDS 40.0%
! GGAGGTATAGGAATAGGATA+TGG - chr3.4:92679088-92679107 MS.gene80203:CDS 40.0%
! TACCTCCGTGTTTTCTTTCA+GGG + chr3.4:92679075-92679094 None:intergenic 40.0%
! TCAGATCCTTTTCACCTAGT+GGG - chr3.4:92678693-92678712 MS.gene80203:CDS 40.0%
! TCCAACTTGTCTCATGGTTT+TGG - chr3.4:92676329-92676348 MS.gene80203:intron 40.0%
! TCCGGGAATTTATTTGGGAT+GGG + chr3.4:92678971-92678990 None:intergenic 40.0%
! TGTTTGAGATACCGAGACTT+GGG + chr3.4:92679030-92679049 None:intergenic 40.0%
! TTCAGATCCTTTTCACCTAG+TGG - chr3.4:92678692-92678711 MS.gene80203:CDS 40.0%
! TTGTTTGAGATACCGAGACT+TGG + chr3.4:92679031-92679050 None:intergenic 40.0%
! TTTAGCTCCTCTAATCTCAC+AGG + chr3.4:92677803-92677822 None:intergenic 40.0%
!! ACACTCCAACTAGTCTTAAC+GGG - chr3.4:92678732-92678751 MS.gene80203:CDS 40.0%
!! TGCTGGCTTATGATATTAGC+TGG + chr3.4:92679610-92679629 None:intergenic 40.0%
AAGACATACTCCAGTCAGCA+TGG - chr3.4:92679859-92679878 MS.gene80203:intron 45.0%
AAGGACATCGAAAGTTACGG+TGG + chr3.4:92680039-92680058 None:intergenic 45.0%
AAGGTAGGCACGGTGATAAT+TGG - chr3.4:92679170-92679189 MS.gene80203:intron 45.0%
ACCAAGTGATTGGGATCAAG+AGG + chr3.4:92677219-92677238 None:intergenic 45.0%
ACCTCTTGATCCCAATCACT+TGG - chr3.4:92677215-92677234 MS.gene80203:CDS 45.0%
ACCTTCCCGTCATAAGTAAG+TGG - chr3.4:92677576-92677595 MS.gene80203:CDS 45.0%
ACGCACCCTGAAAGAAAACA+CGG - chr3.4:92679067-92679086 MS.gene80203:CDS 45.0%
AGATTGATCTGCACTCCCTA+AGG + chr3.4:92678630-92678649 None:intergenic 45.0%
AGGGAATGCCAATGTCCATA+GGG - chr3.4:92678873-92678892 MS.gene80203:intron 45.0%
ATGCGATAATTACTCCGACG+GGG - chr3.4:92680310-92680329 MS.gene80203:CDS 45.0%
CAGATAATCACAGGCACCAT+GGG + chr3.4:92677774-92677793 None:intergenic 45.0%
CCCATACAAATGAAGCATGC+TGG - chr3.4:92679544-92679563 MS.gene80203:intron 45.0%
CCTTCCCGTCATAAGTAAGT+GGG - chr3.4:92677577-92677596 MS.gene80203:CDS 45.0%
CTCCGTAGATGTCAATACCA+CGG - chr3.4:92676360-92676379 MS.gene80203:intron 45.0%
CTCTCGAATGATTCCTCCTA+GGG - chr3.4:92677182-92677201 MS.gene80203:CDS 45.0%
CTTCCCGTCATAAGTAAGTG+GGG - chr3.4:92677578-92677597 MS.gene80203:CDS 45.0%
GAACTAGAGGTGGCAAAACT+TGG + chr3.4:92679001-92679020 None:intergenic 45.0%
GAAGCCATGTTATCTGAAGG+AGG + chr3.4:92679271-92679290 None:intergenic 45.0%
GATCCCCACTTACTTATGAC+GGG + chr3.4:92677584-92677603 None:intergenic 45.0%
GCTGAAACCTGTGAGATTAG+AGG - chr3.4:92677793-92677812 MS.gene80203:CDS 45.0%
GTCAATACCACGGTCAGATT+CGG - chr3.4:92676370-92676389 MS.gene80203:intron 45.0%
GTCAGGGAGGTAATTGAACT+CGG - chr3.4:92677132-92677151 MS.gene80203:CDS 45.0%
TCAGGATGAAGACGAAGATG+AGG - chr3.4:92677985-92678004 MS.gene80203:CDS 45.0%
TCAGGGAGGTAATTGAACTC+GGG - chr3.4:92677133-92677152 MS.gene80203:CDS 45.0%
TCTCGAATGATTCCTCCTAG+GGG - chr3.4:92677183-92677202 MS.gene80203:CDS 45.0%
TCTCTATGCTGGATCAAGGT+AGG - chr3.4:92679155-92679174 MS.gene80203:CDS 45.0%
TCTCTCGAATGATTCCTCCT+AGG - chr3.4:92677181-92677200 MS.gene80203:CDS 45.0%
TGTAGAGGTAGTACCGTAGT+AGG - chr3.4:92676951-92676970 MS.gene80203:CDS 45.0%
TTACCTCCCTGACTAAACTC+CGG + chr3.4:92677125-92677144 None:intergenic 45.0%
! ACAAGTTGGATCGTCGTCAA+CGG + chr3.4:92676319-92676338 None:intergenic 45.0%
! ATTCCTTGGGAGTGCATATC+TGG + chr3.4:92679331-92679350 None:intergenic 45.0%
! GTTTGAGATACCGAGACTTG+GGG + chr3.4:92679029-92679048 None:intergenic 45.0%
! TGTGCACATCACTGATTACC+AGG + chr3.4:92677505-92677524 None:intergenic 45.0%
! TTTGAGATACCGAGACTTGG+GGG + chr3.4:92679028-92679047 None:intergenic 45.0%
!! ACTACTTCTGATAGTGGCAG+TGG - chr3.4:92677899-92677918 MS.gene80203:CDS 45.0%
!! GACCGTGGTATTGACATCTA+CGG + chr3.4:92676365-92676384 None:intergenic 45.0%
ACTAGATCCGAATCTGACCG+TGG + chr3.4:92676380-92676399 None:intergenic 50.0%
ACTTGGGGGATGAGAACTAG+AGG + chr3.4:92679014-92679033 None:intergenic 50.0%
AGAACCCGAGCTTGATTCAC+AGG + chr3.4:92677164-92677183 None:intergenic 50.0%
AGGATGGGAAGACCGTAATC+AGG - chr3.4:92679399-92679418 MS.gene80203:intron 50.0%
AGGTGGAGCTAGTTGTTGTC+TGG + chr3.4:92679504-92679523 None:intergenic 50.0%
AGTTCTCATCCCCCAAGTCT+CGG - chr3.4:92679016-92679035 MS.gene80203:intron 50.0%
ATATCTGGCAACGAACCACC+AGG + chr3.4:92679316-92679335 None:intergenic 50.0%
ATCAGCTCAGAAGAAGCCTC+GGG - chr3.4:92678039-92678058 MS.gene80203:intron 50.0%
ATGCTGGATCAAGGTAGGCA+CGG - chr3.4:92679160-92679179 MS.gene80203:intron 50.0%
ATTCCGGAGTTTAGTCAGGG+AGG - chr3.4:92677119-92677138 MS.gene80203:CDS 50.0%
CAAAACTTGGCCGTTGATCC+GGG + chr3.4:92678988-92679007 None:intergenic 50.0%
CACCCTGAAAGAAAACACGG+AGG - chr3.4:92679070-92679089 MS.gene80203:CDS 50.0%
CACGCATTCCGATGGGAAAA+CGG + chr3.4:92676290-92676309 None:intergenic 50.0%
CAGGGAATGCCAATGTCCAT+AGG - chr3.4:92678872-92678891 MS.gene80203:intron 50.0%
CATCAGCTCAGAAGAAGCCT+CGG - chr3.4:92678038-92678057 MS.gene80203:intron 50.0%
CCATGCCCGTTAAGACTAGT+TGG + chr3.4:92678740-92678759 None:intergenic 50.0%
CGACGATCCAACTTGTCTCA+TGG - chr3.4:92676323-92676342 MS.gene80203:intron 50.0%
CGGTCTTCCCATCCTTGAAA+TGG + chr3.4:92679394-92679413 None:intergenic 50.0%
CTAGTATGGTGGCAGCCTTA+GGG - chr3.4:92678612-92678631 MS.gene80203:CDS 50.0%
CTCGAATGATTCCTCCTAGG+GGG - chr3.4:92677184-92677203 MS.gene80203:CDS 50.0%
GACAACAACTAGCTCCACCT+TGG - chr3.4:92679504-92679523 MS.gene80203:intron 50.0%
GAGGCTTCTTCTGAGCTGAT+GGG + chr3.4:92678039-92678058 None:intergenic 50.0%
GCAAAACTTGGCCGTTGATC+CGG + chr3.4:92678989-92679008 None:intergenic 50.0%
GCAGATAATCACAGGCACCA+TGG + chr3.4:92677775-92677794 None:intergenic 50.0%
GGAAAAACGGCACCGTTAAC+TGG + chr3.4:92679475-92679494 None:intergenic 50.0%
GTTAATCCTCCTGCTCTCGA+GGG - chr3.4:92677065-92677084 MS.gene80203:CDS 50.0%
TAACGGGAGTTATGGCTGAC+TGG + chr3.4:92678838-92678857 None:intergenic 50.0%
TCAAGCGACGTACCGTTATC+TGG - chr3.4:92679193-92679212 MS.gene80203:intron 50.0%
TCGAATGATTCCTCCTAGGG+GGG - chr3.4:92677185-92677204 MS.gene80203:CDS 50.0%
TGATGTGCACATGCCTGACA+TGG - chr3.4:92677514-92677533 MS.gene80203:CDS 50.0%
TGTCTGGCCTGGTGGAAAAA+CGG + chr3.4:92679488-92679507 None:intergenic 50.0%
TGTTAATCCTCCTGCTCTCG+AGG - chr3.4:92677064-92677083 MS.gene80203:CDS 50.0%
TTCCGCCTGTGAATCAAGCT+CGG - chr3.4:92677156-92677175 MS.gene80203:CDS 50.0%
TTGCCAGATATGCACTCCCA+AGG - chr3.4:92679325-92679344 MS.gene80203:intron 50.0%
! AGAAGAAGCCTCGGGTTGTT+TGG - chr3.4:92678047-92678066 MS.gene80203:intron 50.0%
! CCCACTTACTTATGACGGGA+AGG + chr3.4:92677580-92677599 None:intergenic 50.0%
! CGGGCATGGATTTTCTCCTT+CGG - chr3.4:92678751-92678770 MS.gene80203:CDS 50.0%
! CTGCCACCATACTAGCTTGT+TGG + chr3.4:92678607-92678626 None:intergenic 50.0%
! GGCATGGATTTTCTCCTTCG+GGG - chr3.4:92678753-92678772 MS.gene80203:CDS 50.0%
! GGGCATGGATTTTCTCCTTC+GGG - chr3.4:92678752-92678771 MS.gene80203:CDS 50.0%
!! CCAACTAGTCTTAACGGGCA+TGG - chr3.4:92678737-92678756 MS.gene80203:CDS 50.0%
ACCCGAGCTTGATTCACAGG+CGG + chr3.4:92677161-92677180 None:intergenic 55.0%
CCTTCGGGGCTTCTTCAGTT+GGG - chr3.4:92678767-92678786 MS.gene80203:CDS 55.0%
CGAGGCTTCTTCTGAGCTGA+TGG + chr3.4:92678040-92678059 None:intergenic 55.0%
CTAGTTGTTGTCTGGCCTGG+TGG + chr3.4:92679496-92679515 None:intergenic 55.0%
CTTCTTTGCCCTTGCAAGCG+GGG - chr3.4:92679287-92679306 MS.gene80203:intron 55.0%
GAGCTAGTTGTTGTCTGGCC+TGG + chr3.4:92679499-92679518 None:intergenic 55.0%
GCGAGAACACGCATTCCGAT+GGG + chr3.4:92676297-92676316 None:intergenic 55.0%
GCTAGTATGGTGGCAGCCTT+AGG - chr3.4:92678611-92678630 MS.gene80203:CDS 55.0%
GCTTCTTTGCCCTTGCAAGC+GGG - chr3.4:92679286-92679305 MS.gene80203:intron 55.0%
GGCTTCTTTGCCCTTGCAAG+CGG - chr3.4:92679285-92679304 MS.gene80203:intron 55.0%
GGGGAGGCCTCCTAATATTC+CGG - chr3.4:92677103-92677122 MS.gene80203:CDS 55.0%
GTGCACATGCCTGACATGGA+TGG - chr3.4:92677518-92677537 MS.gene80203:CDS 55.0%
TCCACAGACCAAACAACCCG+AGG + chr3.4:92678058-92678077 None:intergenic 55.0%
TCCGATGGGAAAACGGTCAC+CGG + chr3.4:92676283-92676302 None:intergenic 55.0%
TCCGCCTGTGAATCAAGCTC+GGG - chr3.4:92677157-92677176 MS.gene80203:CDS 55.0%
TCCTTCGGGGCTTCTTCAGT+TGG - chr3.4:92678766-92678785 MS.gene80203:CDS 55.0%
TGGGGGATGAGAACTAGAGG+TGG + chr3.4:92679011-92679030 None:intergenic 55.0%
! CCGACGGGGTATCTTTGTGA+AGG - chr3.4:92680324-92680343 MS.gene80203:CDS 55.0%
! GGCGAGTTCAATGATGGGAC+AGG - chr3.4:92679666-92679685 MS.gene80203:intron 55.0%
! TCCGGTGACCGTTTTCCCAT+CGG - chr3.4:92676279-92676298 MS.gene80203:CDS 55.0%
!!! AACGGTGCCGTTTTTCCACC+AGG - chr3.4:92679478-92679497 MS.gene80203:intron 55.0%
ACCAGGATACCCCGCTTGCA+AGG + chr3.4:92679299-92679318 None:intergenic 60.0%
AGAGGTTAAGGAGCCCCCCT+AGG + chr3.4:92677201-92677220 None:intergenic 60.0%
AGGGAAGGACCCCTCTCAAG+GGG - chr3.4:92677084-92677103 MS.gene80203:CDS 60.0%
ATCCTCCTGCTCTCGAGGGA+AGG - chr3.4:92677069-92677088 MS.gene80203:CDS 60.0%
CCAGGATACCCCGCTTGCAA+GGG + chr3.4:92679298-92679317 None:intergenic 60.0%
CCCAACTGAAGAAGCCCCGA+AGG + chr3.4:92678770-92678789 None:intergenic 60.0%
GAACGTGGCAAGCCATCTCC+AGG - chr3.4:92678456-92678475 MS.gene80203:intron 60.0%
GAGGGAAGGACCCCTCTCAA+GGG - chr3.4:92677083-92677102 MS.gene80203:CDS 60.0%
GGCGAGAACACGCATTCCGA+TGG + chr3.4:92676298-92676317 None:intergenic 60.0%
TAGGAGGCCTCCCCTTGAGA+GGG + chr3.4:92677097-92677116 None:intergenic 60.0%
TTAGGAGGCCTCCCCTTGAG+AGG + chr3.4:92677098-92677117 None:intergenic 60.0%
! GCCTCGGGTTGTTTGGTCTG+TGG - chr3.4:92678054-92678073 MS.gene80203:intron 60.0%
! TTGCAAGCGGGGTATCCTGG+TGG - chr3.4:92679298-92679317 MS.gene80203:intron 60.0%
!! GGCAGTGGACTAAGATCCGC+AGG - chr3.4:92677914-92677933 MS.gene80203:CDS 60.0%
AGGAGGCCTCCCCTTGAGAG+GGG + chr3.4:92677096-92677115 None:intergenic 65.0%
CGAGGGAAGGACCCCTCTCA+AGG - chr3.4:92677082-92677101 MS.gene80203:CDS 65.0%
GAAGGACCCCTCTCAAGGGG+AGG - chr3.4:92677087-92677106 MS.gene80203:CDS 65.0%
GGTTAAGGAGCCCCCCTAGG+AGG + chr3.4:92677198-92677217 None:intergenic 65.0%
GTCCTTCCCTCGAGAGCAGG+AGG + chr3.4:92677074-92677093 None:intergenic 65.0%
! CCCTTGCAAGCGGGGTATCC+TGG - chr3.4:92679295-92679314 MS.gene80203:intron 65.0%
GGGGTCCTTCCCTCGAGAGC+AGG + chr3.4:92677077-92677096 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 92676270 92680343 92676270 ID=MS.gene80203
chr3.4 mRNA 92676270 92680343 92676270 ID=MS.gene80203.t1;Parent=MS.gene80203
chr3.4 exon 92680232 92680343 92680232 ID=MS.gene80203.t1.exon1;Parent=MS.gene80203.t1
chr3.4 CDS 92680232 92680343 92680232 ID=cds.MS.gene80203.t1;Parent=MS.gene80203.t1
chr3.4 exon 92679023 92679175 92679023 ID=MS.gene80203.t1.exon2;Parent=MS.gene80203.t1
chr3.4 CDS 92679023 92679175 92679023 ID=cds.MS.gene80203.t1;Parent=MS.gene80203.t1
chr3.4 exon 92678489 92678887 92678489 ID=MS.gene80203.t1.exon3;Parent=MS.gene80203.t1
chr3.4 CDS 92678489 92678887 92678489 ID=cds.MS.gene80203.t1;Parent=MS.gene80203.t1
chr3.4 exon 92678136 92678212 92678136 ID=MS.gene80203.t1.exon4;Parent=MS.gene80203.t1
chr3.4 CDS 92678136 92678212 92678136 ID=cds.MS.gene80203.t1;Parent=MS.gene80203.t1
chr3.4 exon 92676926 92678050 92676926 ID=MS.gene80203.t1.exon5;Parent=MS.gene80203.t1
chr3.4 CDS 92676926 92678050 92676926 ID=cds.MS.gene80203.t1;Parent=MS.gene80203.t1
chr3.4 exon 92676270 92676341 92676270 ID=MS.gene80203.t1.exon6;Parent=MS.gene80203.t1
chr3.4 CDS 92676270 92676341 92676270 ID=cds.MS.gene80203.t1;Parent=MS.gene80203.t1
Gene Sequence

>MS.gene80203

ATGGATGATTCCGGTGACCGTTTTCCCATCGGAATGCGTGTTCTCGCCGTTGACGACGATCCAACTTGTCTCATGGTTTTGGAAACTCTTCTCCGTAGATGTCAATACCACGGTCAGATTCGGATCTAGTGTTTTTTATTTTGATTAAAGTTTTCATTTCTATGCTCTATTTATGTGTATAATCAATGTATCATGATAATTCATAAGTCAATGATATGTGTATAGATATGATTAATTTTTTATATTTATTTTTAGTTTATAAGTGTATAATTGCAATTCCAGAAATTCAAATAAAAAAAAACATGTCTTTAGGATCAAATCTAACTGGGAAATGGAGTTAGGTAGAAATTAACGATATTGTGTAGATATTTGGAACTTTTACTAAGAATAAAGGTAAGATGAAAAGAGTCATGATTTAGGGTCAAAGGTTCCAAATTCATAGTGTGTTGACTTATTTTGACTGACTAACTCCCTGTGATAGTATAAAGAAACAATTTTTACAGATTTTATGTGGAGTTTAATCTTATTTCGTCTACGCTTGTAAAAGCAGCGTCTGCATAGATTCTTATATGATAAACACTTATTGAATAATCACTTAATTATGTGCTTGCTTGGGTAATGTATCCAAGCATATTTTTACTAGATATGTGAAGGATATTCCGTAATTAGAGCTTCATTGCTTGTAGAGGTAGTACCGTAGTAGGAAAAGTTGCTCATAGTGCATAATATATTTCATTTTGTTTAGTGGCTTTGGACTGAATATGCACTTTATGGTCAACCATTTTTTGTTTTGGTGTTAATCCTCCTGCTCTCGAGGGAAGGACCCCTCTCAAGGGGAGGCCTCCTAATATTCCGGAGTTTAGTCAGGGAGGTAATTGAACTCGGGTTCCGCCTGTGAATCAAGCTCGGGTTCTCTCGAATGATTCCTCCTAGGGGGGCTCCTTAACCTCTTGATCCCAATCACTTGGTTATAGTCAACCATTTTTCTTTTCTTGTCTTTGCTCTTGTAACTGTTGTTGCTTAGATTTCAGGATCCTGTATTTCTTCATGATTAGTAATTTTCTTTGACAAACATTTCACTGTTGCTTTCTTTATTGGATGTATATTGTAAATATGATGTGAACTTTGCTTATTCAAAGTGATACTTATTTCTGATTGGGGATTGCAGTAACCACAACTAGTCAAGCAATAACAGCGTTGACCATGTTGAGAGAAAACAAAGACAAGTTTGACCTGGTAATCAGTGATGTGCACATGCCTGACATGGATGGATTTAAGCTGCTTGAACTTGTGGGACTTGAAATGGACCTTCCCGTCATAAGTAAGTGGGGATCTGTCATGTAATCCTCAACTGTTAATTTTTTTCTTCCTTTTCTATTTATTCATTTTGACTCTTGTTTATTGGTACGACTGCTAATCAATGATACTTTTGCTGTTATAAAATGTTTGATTTCAGTGTTGTCTGCATATGGTGATACAAAGCTGGTGATGAAAGGAATTTCCCATGGTGCCTGTGATTATCTGCTGAAACCTGTGAGATTAGAGGAGCTAAAGAACATTTGGCAGCATGTAATTAGGAAGAAGAAGTCTGATCCAAAGGAGAAAAACAAAACCAGTAAACCAGACAAAACTACTTCTGATAGTGGCAGTGGACTAAGATCCGCAGGAGCAGAAAATTCAGATGAAAATGGAAAGCTGACTAAGAAAAGAAAGGATCAGGATGAAGACGAAGATGAGGATAAAGAGAATGGTAATGACAACGAGGACCCATCAGCTCAGAAGAAGCCTCGGGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGACAGTATGTTCTTCACTCTGCCTGCAACACAAACAATTTTTATATCTTATCAATTTCCTCGAGCTTTACTGAATTTTATTTCAAATTTTACATTATCAAAATGTTTTTGAATATCTGGTTCGATGTTTATTTTAAATCCTAGGTTTAAAATGACTTATGATGATAGATGCCACTTGGGATGAATTTCATTTCTGAATCATCACTCAAATTTAAGCCATGTCATAAAGTATTCCATTACTGAATTTGAGTATTATGTTAATAATGTTGTTTTACTTGCAGAGGCTGTGCCCAAAAAAATTCTTGATATGATGAATGTCGAAAATATCACAAGGGAGAACGTGGCAAGCCATCTCCAGGTATTTTTCTAGTTCTTTACACTTTAATTTATGTAAGTTAACCATTTCTTTCACTGAATGTTTCGGGTTTATGAAATGGCTGCAGAAGTATAGACTTTATCTGAAAAGAATTAGCTGTGTTGCAAACCAACAAGCTAGTATGGTGGCAGCCTTAGGGAGTGCAGATCAATCTTATTTGAGAATGGGTGGTTCTGGACATTTTCACAATAATGCTTTCAGATCCTTTTCACCTAGTGGGATAATTGGTAATCTGAACACTCCAACTAGTCTTAACGGGCATGGATTTTCTCCTTCGGGGCTTCTTCAGTTGGGCCAATCACGTAATTTAAACAATTCTTCCAATGATCAACTTAAATTCCAGTCAGCCATAACTCCCGTTAATCAGAATATTCTTCAGGGAATGCCAATGTCCATAGGGTTTGATCACTTGCAAAACAGCAAGGGTGTTATCTCTGTTCAAAACCTGAATACTGATGTGAAAACAACTTTTCCCATCCCAAATAAATTCCCGGATCAACGGCCAAGTTTTGCCACCTCTAGTTCTCATCCCCCAAGTCTCGGTATCTCAAACAATGGCTTGATGTCGGATACGCACCCTGAAAGAAAACACGGAGGTATAGGAATAGGATATGGAAGTTCATCTTCTTCAGTAGCCTCTCAACATTCAGAATTTTCTTTCTCTATGCTGGATCAAGGTAGGCACGGTGATAATTGGTCAAGCGACGTACCGTTATCTGGAATCCAAACAAATTCTTTCTCTTCAAGTGAATGTTTTAGACAGACAGCTGTTCCTCCTTCAGATAACATGGCTTCTTTGCCCTTGCAAGCGGGGTATCCTGGTGGTTCGTTGCCAGATATGCACTCCCAAGGAATGATTTTTACTAATTCACCTGAGTATATAAACGGTAATTTGCCATTTCAAGGATGGGAAGACCGTAATCAGGATGCTACTTACCACTCAAATGTTACTTGTGGATCAATAAACTCTCTTGCTCCAGTTAACGGTGCCGTTTTTCCACCAGGCCAGACAACAACTAGCTCCACCTTGGATACTAAATTTTTTAATCCCATACAAATGAAGCATGCTGGATTTGCCGAGTTAACTGAATGCAGCTCATCAAGACAATCTCCAGCTAATATCATAAGCCAGCAGAAGTTTTCTAATAATCTTGGTTCACTGGAATACTTGGCGAGTTCAATGATGGGACAGGTAATAACATTTTTTGAATATAATGTTGGTTTTCCCATAAATGCTTCTGTATGGCTTCTTTAACATGTATAGTTTTTTTTGCATATGGTTGATACTTGATACCATCTCAAACATTATTTCCTTGACCACATATACTGATTAGATTATAAAAGTACAATCAGTAGCTTTAGAAAGACATACTCCAGTCAGCATGGTTATATTTGTCTTATTCCCGAGAGAAGACTTAAAATCATTACATTGTCAGCATTGAAATTTGAAGATTTAAATTGGTGGAACTCTGTATTGTTGAAACTTTACGAGCCATATATTTCATTGATGTTCTTTGTGATGGATCTGCTAGCCAATTAACCACCGTAACTTTCGATGTCCTTTAGAACATTCACATAGGATGAAAACATTTGTTTTTCTATCCTGGATTGGTACAATAACTTGTCCGTTGAGTATATAGCATGTTGTTTTATTTAACTTAGGTTTAGCATCTTTAAAGTATGCAATGCTCGTTTGGTTGCTGTATCTTGTTTCTTGCCCCTTGTCCTAAATATTTTGCTTCCATAGTAATTTGATACCATGTTCATGACATGCAGGAGCAAGATAAGATGAAATTATTGGGTGGAGACTTCATATGCGATAATTACTCCGACGGGGTATCTTTGTGA
Protein sequence

>MS.gene80203.t1

MDDSGDRFPIGMRVLAVDDDPTCLMVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQHVIRKKKSDPKEKNKTSKPDKTTSDSGSGLRSAGAENSDENGKLTKKRKDQDEDEDEDKENGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENVASHLQKYRLYLKRISCVANQQASMVAALGSADQSYLRMGGSGHFHNNAFRSFSPSGIIGNLNTPTSLNGHGFSPSGLLQLGQSRNLNNSSNDQLKFQSAITPVNQNILQGMPMSIGFDHLQNSKGVISVQNLNTDVKTTFPIPNKFPDQRPSFATSSSHPPSLGISNNGLMSDTHPERKHGGIGIGYGSSSSSVASQHSEFSFSMLDQGRHGDNWSSDVPLSGIQTNSFSSSECFRQTAVPPSDNMASLPLQAGYPGGSLPDMHSQGMIFTNSPEYINGNLPFQGWEDRNQDATYHSNVTCGSINSLAPVNGAVFPPGQTTTSSTLDTKFFNPIQMKHAGFAELTECSSSRQSPANIISQQKFSNNLGSLEYLASSMMGQEQDKMKLLGGDFICDNYSDGVSL