AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80828

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80828.t1 MTR_1g110460 77.477 111 25 0 3 113 19 129 2.19e-59 185
MS.gene80828.t1 MTR_7g035075 70.476 105 31 0 3 107 7 111 4.22e-54 168
MS.gene80828.t1 MTR_6g006030 70.476 105 31 0 3 107 7 111 8.10e-54 167
MS.gene80828.t1 MTR_1g086510 67.925 106 32 1 4 107 13 118 1.07e-49 159
MS.gene80828.t1 MTR_1g086530 62.385 109 41 0 5 113 28 136 2.21e-48 155
MS.gene80828.t1 MTR_2g033170 71.028 107 31 0 1 107 15 121 5.26e-47 154
MS.gene80828.t1 MTR_4g123040 67.290 107 35 0 1 107 15 121 9.44e-45 147
MS.gene80828.t1 MTR_1g073170 64.948 97 34 0 11 107 21 117 2.38e-44 145
MS.gene80828.t1 MTR_1g045610 65.979 97 33 0 11 107 22 118 3.21e-44 144
MS.gene80828.t1 MTR_2g096380 63.636 99 36 0 9 107 5 103 5.14e-42 138
MS.gene80828.t1 MTR_4g063100 63.918 97 35 0 11 107 8 104 2.79e-41 137
MS.gene80828.t1 MTR_8g020490 61.224 98 38 0 9 106 7 104 2.38e-40 134
MS.gene80828.t1 MTR_8g027345 64.948 97 34 0 10 106 12 108 4.17e-40 135
MS.gene80828.t1 MTR_1g062940 62.245 98 37 0 10 107 6 103 8.48e-40 132
MS.gene80828.t1 MTR_0008s0280 59.223 103 42 0 6 108 8 110 2.30e-39 131
MS.gene80828.t1 MTR_7g117730 63.918 97 35 0 10 106 12 108 2.43e-39 132
MS.gene80828.t1 MTR_4g073420 65.263 95 33 0 12 106 14 108 4.99e-39 132
MS.gene80828.t1 MTR_3g074520 58.416 101 42 0 6 106 8 108 1.04e-38 132
MS.gene80828.t1 MTR_1g043080 60.825 97 38 0 10 106 12 108 1.88e-38 129
MS.gene80828.t1 MTR_7g110830 56.731 104 45 0 10 113 12 115 4.06e-38 131
MS.gene80828.t1 MTR_8g095390 62.105 95 36 0 12 106 14 108 5.60e-38 130
MS.gene80828.t1 MTR_8g042410 58.763 97 40 0 10 106 37 133 6.51e-38 134
MS.gene80828.t1 MTR_3g011610 58.763 97 40 0 10 106 37 133 7.43e-38 133
MS.gene80828.t1 MTR_1g100653 57.732 97 41 0 10 106 12 108 8.09e-38 129
MS.gene80828.t1 MTR_4g125520 61.856 97 37 0 10 106 12 108 1.15e-37 129
MS.gene80828.t1 MTR_4g478180 58.416 101 42 0 6 106 9 109 1.18e-37 130
MS.gene80828.t1 MTR_5g007370 56.311 103 45 0 4 106 6 108 1.29e-37 129
MS.gene80828.t1 MTR_4g121460 59.794 97 39 0 10 106 12 108 1.32e-37 129
MS.gene80828.t1 MTR_1g076150 59.794 97 39 0 10 106 12 108 1.38e-37 127
MS.gene80828.t1 MTR_1g085640 56.311 103 45 0 10 112 12 114 1.43e-37 130
MS.gene80828.t1 MTR_5g029840 59.406 101 41 0 6 106 8 108 1.66e-37 129
MS.gene80828.t1 MTR_7g115650 56.701 97 42 0 10 106 12 108 2.15e-37 125
MS.gene80828.t1 MTR_3g097450 63.158 95 35 0 12 106 14 108 2.61e-37 128
MS.gene80828.t1 MTR_2g011660 60.000 100 40 0 7 106 10 109 2.63e-37 129
MS.gene80828.t1 MTR_2g034790 58.763 97 40 0 10 106 12 108 2.80e-37 128
MS.gene80828.t1 MTR_7g096930 61.856 97 37 0 10 106 12 108 3.53e-37 127
MS.gene80828.t1 MTR_4g100720 61.856 97 37 0 10 106 13 109 4.36e-37 124
MS.gene80828.t1 MTR_3g052430 57.732 97 41 0 10 106 41 137 4.76e-37 131
MS.gene80828.t1 MTR_2g089620 59.406 101 41 0 6 106 8 108 6.02e-37 127
MS.gene80828.t1 MTR_2g089450 57.009 107 46 0 6 112 8 114 7.36e-37 125
MS.gene80828.t1 MTR_4g091490 59.000 100 41 0 7 106 10 109 7.53e-37 128
MS.gene80828.t1 MTR_8g017440 51.429 105 51 0 9 113 11 115 7.93e-37 127
MS.gene80828.t1 MTR_0008s0390 57.547 106 45 0 10 115 13 118 8.08e-37 126
MS.gene80828.t1 MTR_3g052450 55.446 101 45 0 6 106 36 136 8.87e-37 130
MS.gene80828.t1 MTR_0251s0050 60.825 97 38 0 10 106 13 109 9.40e-37 125
MS.gene80828.t1 MTR_3g083540 58.763 97 40 0 10 106 41 137 1.01e-36 126
MS.gene80828.t1 MTR_1g085040 54.808 104 47 0 9 112 11 114 1.15e-36 127
MS.gene80828.t1 MTR_5g079670 55.446 101 45 0 6 106 7 107 2.65e-36 123
MS.gene80828.t1 MTR_5g010020 52.381 105 50 0 2 106 4 108 2.82e-36 126
MS.gene80828.t1 MTR_1g043050 57.732 97 41 0 10 106 12 108 4.32e-36 124
MS.gene80828.t1 MTR_4g065017 53.271 107 50 0 7 113 14 120 4.71e-36 125
MS.gene80828.t1 MTR_2g097910 53.846 104 48 0 10 113 20 123 5.07e-36 125
MS.gene80828.t1 MTR_8g098860 52.381 105 50 0 2 106 4 108 5.40e-36 125
MS.gene80828.t1 MTR_2g099740 49.074 108 55 0 6 113 8 115 6.68e-36 126
MS.gene80828.t1 MTR_0063s0090 55.340 103 46 0 6 108 8 110 7.36e-36 122
MS.gene80828.t1 MTR_2g064160 50.000 106 53 0 10 115 11 116 7.81e-36 124
MS.gene80828.t1 MTR_3g028740 50.450 111 55 0 3 113 15 125 1.09e-35 124
MS.gene80828.t1 MTR_6g055910 52.381 105 50 0 11 115 15 119 1.75e-35 122
MS.gene80828.t1 MTR_8g017540 50.476 105 52 0 9 113 57 161 1.92e-35 125
MS.gene80828.t1 MTR_7g076740 56.863 102 43 1 6 106 8 109 2.08e-35 123
MS.gene80828.t1 MTR_2g089420 54.545 110 50 0 6 115 7 116 2.25e-35 125
MS.gene80828.t1 MTR_7g011170 57.732 97 41 0 10 106 12 108 2.30e-35 123
MS.gene80828.t1 MTR_4g485530 57.895 95 40 0 12 106 14 108 2.40e-35 120
MS.gene80828.t1 MTR_4g105130 52.381 105 50 0 9 113 11 115 2.87e-35 124
MS.gene80828.t1 MTR_1g112760 55.102 98 44 0 9 106 12 109 2.97e-35 120
MS.gene80828.t1 MTR_0008s0470 54.717 106 48 0 10 115 13 118 3.27e-35 122
MS.gene80828.t1 MTR_1g017000 52.941 102 47 1 6 106 8 109 3.40e-35 121
MS.gene80828.t1 MTR_1g021230 53.608 97 45 0 10 106 57 153 5.41e-35 124
MS.gene80828.t1 MTR_1g100667 53.922 102 47 0 11 112 14 115 6.85e-35 121
MS.gene80828.t1 MTR_7g111290 56.122 98 43 0 9 106 11 108 8.05e-35 123
MS.gene80828.t1 MTR_4g102380 56.701 97 42 0 10 106 12 108 1.26e-34 120
MS.gene80828.t1 MTR_8g031360 58.163 98 40 1 10 106 13 110 1.83e-34 120
MS.gene80828.t1 MTR_8g017500 49.524 105 53 0 9 113 11 115 2.50e-34 121
MS.gene80828.t1 MTR_4g082290 57.732 97 41 0 10 106 12 108 2.51e-34 122
MS.gene80828.t1 MTR_4g082230 57.732 97 41 0 10 106 12 108 3.30e-34 122
MS.gene80828.t1 MTR_6g012690 56.701 97 42 0 10 106 12 108 4.14e-34 120
MS.gene80828.t1 MTR_7g010210 52.475 101 48 0 6 106 8 108 4.29e-34 119
MS.gene80828.t1 MTR_8g060940 57.732 97 41 0 10 106 7 103 5.45e-34 118
MS.gene80828.t1 MTR_6g012180 52.475 101 48 0 6 106 8 108 6.19e-34 119
MS.gene80828.t1 MTR_2g088170 55.140 107 44 1 4 106 19 125 8.56e-34 121
MS.gene80828.t1 MTR_0197s0010 59.783 92 37 0 15 106 6 97 1.13e-33 117
MS.gene80828.t1 MTR_7g010210 52.475 101 48 0 6 106 8 108 1.20e-33 119
MS.gene80828.t1 MTR_3g077110 51.429 105 51 0 9 113 11 115 1.53e-33 119
MS.gene80828.t1 MTR_6g009430 50.495 101 50 0 6 106 8 108 4.03e-33 118
MS.gene80828.t1 MTR_0140s0030 53.608 97 45 0 10 106 13 109 6.07e-33 117
MS.gene80828.t1 MTR_0489s0020 53.608 97 45 0 10 106 13 109 6.07e-33 117
MS.gene80828.t1 MTR_3g065440 54.639 97 44 0 10 106 12 108 6.95e-33 117
MS.gene80828.t1 MTR_7g109320 56.701 97 42 0 10 106 12 108 6.98e-33 117
MS.gene80828.t1 MTR_5g078140 54.639 97 44 0 10 106 12 108 7.18e-33 117
MS.gene80828.t1 MTR_3g039990 52.577 97 46 0 10 106 13 109 8.87e-33 116
MS.gene80828.t1 MTR_5g079120 54.639 97 44 0 10 106 61 157 9.15e-33 116
MS.gene80828.t1 MTR_7g087130 52.577 97 46 0 10 106 12 108 9.53e-33 117
MS.gene80828.t1 MTR_8g017390 47.748 111 57 1 6 115 8 118 9.75e-33 119
MS.gene80828.t1 MTR_3g461490 51.546 97 47 0 10 106 12 108 1.15e-32 116
MS.gene80828.t1 MTR_3g103570 55.882 102 44 1 6 106 8 109 1.36e-32 117
MS.gene80828.t1 MTR_2g095520 54.902 102 45 1 6 106 8 109 1.68e-32 115
MS.gene80828.t1 MTR_8g006470 46.729 107 56 1 1 106 1 107 2.27e-32 115
MS.gene80828.t1 MTR_5g078950 54.639 97 44 0 10 106 7 103 2.41e-32 114
MS.gene80828.t1 MTR_5g079290 54.639 97 44 0 10 106 17 113 2.44e-32 114
MS.gene80828.t1 MTR_5g078910 54.082 98 45 0 9 106 6 103 2.49e-32 115
MS.gene80828.t1 MTR_2g067420 51.485 101 49 0 6 106 10 110 3.15e-32 115
MS.gene80828.t1 MTR_5g042030 54.639 97 44 0 10 106 7 103 3.19e-32 114
MS.gene80828.t1 MTR_8g017340 50.000 106 52 1 9 113 11 116 3.34e-32 117
MS.gene80828.t1 MTR_0247s0040 53.608 97 45 0 10 106 7 103 5.12e-32 111
MS.gene80828.t1 MTR_6g090405 52.941 102 47 1 6 106 8 109 5.72e-32 113
MS.gene80828.t1 MTR_4g063100 69.014 71 22 0 37 107 5 75 8.00e-32 112
MS.gene80828.t1 MTR_8g017350 49.057 106 53 1 9 113 11 116 9.80e-32 117
MS.gene80828.t1 MTR_1g083630 50.962 104 51 0 3 106 5 108 1.50e-31 117
MS.gene80828.t1 MTR_4g057635 52.941 102 47 1 6 106 8 109 2.15e-31 113
MS.gene80828.t1 MTR_0001s0360 54.639 97 44 0 10 106 7 103 3.46e-31 111
MS.gene80828.t1 MTR_2g096380 68.056 72 23 0 36 107 13 84 4.87e-31 109
MS.gene80828.t1 MTR_7g017260 53.535 99 44 1 10 106 25 123 6.30e-31 110
MS.gene80828.t1 MTR_5g079220 52.577 97 46 0 10 106 21 117 7.38e-31 110
MS.gene80828.t1 MTR_5g078800 53.608 97 45 0 10 106 7 103 9.40e-31 110
MS.gene80828.t1 MTR_1g017140 52.941 102 47 1 6 106 8 109 9.67e-31 112
MS.gene80828.t1 MTR_4g097570 51.961 102 48 1 6 106 8 109 1.02e-30 110
MS.gene80828.t1 MTR_5g014990 52.941 102 47 1 6 106 8 109 1.12e-30 111
MS.gene80828.t1 MTR_5g088080 44.762 105 57 1 9 112 11 115 1.19e-30 110
MS.gene80828.t1 MTR_5g088150 44.762 105 57 1 9 112 11 115 1.19e-30 110
MS.gene80828.t1 MTR_5g488210 44.762 105 57 1 9 112 11 115 1.19e-30 110
MS.gene80828.t1 MTR_5g488170 44.340 106 58 1 8 112 10 115 1.20e-30 109
MS.gene80828.t1 MTR_4g128670 53.922 102 46 1 6 106 8 109 1.61e-30 111
MS.gene80828.t1 MTR_5g088640 44.762 105 57 1 9 112 11 115 1.72e-30 109
MS.gene80828.t1 MTR_5g078860 53.608 97 45 0 10 106 7 103 2.64e-30 110
MS.gene80828.t1 MTR_5g062790 43.810 105 58 1 9 112 8 112 3.53e-30 109
MS.gene80828.t1 MTR_4g097570 50.962 104 47 2 6 106 8 110 9.04e-30 108
MS.gene80828.t1 MTR_0193s0090 49.485 97 49 0 10 106 7 103 2.33e-29 105
MS.gene80828.t1 MTR_4g029540 43.396 106 59 1 10 114 10 115 4.61e-29 106
MS.gene80828.t1 MTR_7g102110 50.980 102 49 1 6 106 8 109 6.69e-29 105
MS.gene80828.t1 MTR_5g078930 47.619 105 55 0 11 115 10 114 3.04e-28 102
MS.gene80828.t1 MTR_6g055910 55.696 79 35 0 37 115 12 90 5.27e-27 100
MS.gene80828.t1 MTR_5g088610 41.905 105 60 1 9 112 8 112 1.17e-26 101
MS.gene80828.t1 MTR_5g007300 57.143 77 33 0 10 86 64 140 2.45e-25 93.2
MS.gene80828.t1 MTR_6g027340 45.455 99 53 1 12 110 16 113 4.39e-25 94.4
MS.gene80828.t1 MTR_7g111290 64.615 65 23 0 42 106 2 66 5.10e-25 96.7
MS.gene80828.t1 MTR_6g027360 44.762 105 55 2 7 110 73 175 5.15e-25 96.3
MS.gene80828.t1 MTR_7g061330 44.762 105 57 1 9 113 110 213 1.13e-24 97.4
MS.gene80828.t1 MTR_7g461410 44.762 105 57 1 9 113 110 213 1.13e-24 97.4
MS.gene80828.t1 MTR_4g128190 41.228 114 52 3 1 112 1 101 1.72e-24 93.6
MS.gene80828.t1 MTR_7g061330 46.939 98 51 1 9 106 74 170 3.14e-24 95.9
MS.gene80828.t1 MTR_5g049190 41.346 104 60 1 10 113 17 119 3.18e-24 92.8
MS.gene80828.t1 MTR_6g015455 46.316 95 50 1 12 106 5 98 4.70e-24 95.9
MS.gene80828.t1 MTR_5g070020 44.762 105 57 1 10 114 120 223 4.88e-24 94.4
MS.gene80828.t1 MTR_4g019370 43.269 104 58 1 12 115 38 140 7.20e-24 94.0
MS.gene80828.t1 MTR_3g077650 43.137 102 57 1 12 113 181 281 1.00e-23 94.4
MS.gene80828.t1 MTR_4g105660 39.286 112 67 1 2 113 170 280 1.12e-23 94.0
MS.gene80828.t1 MTR_5g016510 45.263 95 51 1 12 106 5 98 2.84e-23 91.7
MS.gene80828.t1 MTR_3g101290 42.105 95 54 1 12 106 37 130 3.20e-23 89.7
MS.gene80828.t1 MTR_1g026870 41.121 107 61 2 9 114 82 187 6.78e-23 92.4
MS.gene80828.t1 MTR_1g026870 35.417 96 60 2 12 106 33 127 6.09e-12 61.2
MS.gene80828.t1 MTR_6g074860 46.875 96 48 2 12 106 4 97 9.68e-23 89.0
MS.gene80828.t1 MTR_3g463400 42.857 105 59 1 10 114 131 234 2.21e-22 90.5
MS.gene80828.t1 MTR_1g085880 43.966 116 62 3 1 113 1 116 2.65e-22 86.7
MS.gene80828.t1 MTR_3g110028 40.187 107 62 2 9 114 82 187 5.08e-22 90.1
MS.gene80828.t1 MTR_3g110028 35.417 96 60 2 12 106 33 127 1.45e-11 60.1
MS.gene80828.t1 MTR_4g094982 42.105 95 54 1 12 106 5 98 5.85e-22 87.4
MS.gene80828.t1 MTR_7g061550 41.346 104 59 1 12 113 7 110 1.12e-21 87.8
MS.gene80828.t1 MTR_5g082910 42.105 95 54 1 12 106 19 112 1.16e-21 87.0
MS.gene80828.t1 MTR_1g085770 44.348 115 61 3 1 112 1 115 1.23e-21 87.0
MS.gene80828.t1 MTR_5g010650 45.000 100 54 1 7 106 105 203 1.39e-21 88.6
MS.gene80828.t1 MTR_3g045430 40.206 97 58 0 10 106 13 109 2.60e-21 86.3
MS.gene80828.t1 MTR_5g041570 43.878 98 54 1 12 109 134 230 4.63e-21 87.0
MS.gene80828.t1 MTR_7g451170 40.541 111 62 3 5 114 185 292 6.48e-21 86.3
MS.gene80828.t1 MTR_4g082040 42.857 98 55 1 12 109 105 201 1.29e-20 85.5
MS.gene80828.t1 MTR_7g037260 40.187 107 63 1 7 113 140 245 1.74e-20 84.7
MS.gene80828.t1 MTR_1g057980 41.176 102 57 2 10 110 78 177 3.87e-20 83.2
MS.gene80828.t1 MTR_4g088015 38.889 108 65 1 7 114 216 322 1.10e-19 83.2
MS.gene80828.t1 MTR_8g468380 43.269 104 55 2 15 115 25 127 1.78e-19 82.4
MS.gene80828.t1 MTR_7g450950 38.000 100 59 2 12 110 157 254 2.08e-19 81.6
MS.gene80828.t1 MTR_3g089045 41.121 107 60 2 4 109 8 112 2.95e-19 80.5
MS.gene80828.t1 MTR_7g086960 41.837 98 56 1 12 109 89 185 6.45e-19 80.5
MS.gene80828.t1 MTR_7g035350 41.667 96 55 1 15 110 228 322 9.77e-19 80.5
MS.gene80828.t1 MTR_6g027370 41.837 98 56 1 12 109 99 195 2.11e-18 79.0
MS.gene80828.t1 MTR_5g038910 40.816 98 57 1 15 112 29 125 9.44e-18 77.4
MS.gene80828.t1 MTR_5g038910 40.816 98 57 1 15 112 29 125 1.15e-17 77.4
MS.gene80828.t1 MTR_0023s0210 42.857 77 44 0 10 86 7 83 1.99e-16 68.6
MS.gene80828.t1 MTR_4g063100 75.000 40 10 0 68 107 1 40 3.63e-16 70.9
MS.gene80828.t1 MTR_7g037130 37.500 104 64 1 7 110 140 242 6.36e-16 72.0
MS.gene80828.t1 MTR_2g096380 72.500 40 11 0 68 107 1 40 4.27e-15 67.8
MS.gene80828.t1 MTR_6g055910 52.083 48 23 0 68 115 2 49 2.74e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80828.t1 AT5G40350 71.287 101 29 0 7 107 14 114 1.43e-52 164
MS.gene80828.t1 AT1G68320 71.963 107 30 0 7 113 16 122 2.20e-52 166
MS.gene80828.t1 AT3G27810 70.707 99 29 0 9 107 19 117 7.20e-52 163
MS.gene80828.t1 AT1G25340 72.381 105 29 0 9 113 17 121 2.31e-51 163
MS.gene80828.t1 AT2G47190 64.220 109 39 0 5 113 15 123 5.37e-50 160
MS.gene80828.t1 AT1G48000 68.687 99 31 0 9 107 31 129 9.77e-49 155
MS.gene80828.t1 AT3G01530 64.078 103 37 0 5 107 20 122 2.59e-48 153
MS.gene80828.t1 AT1G25340 69.524 105 27 1 9 113 17 116 3.10e-46 150
MS.gene80828.t1 AT1G25340 69.524 105 27 1 9 113 17 116 4.00e-46 150
MS.gene80828.t1 AT3G24310 67.010 97 32 0 11 107 19 115 2.05e-44 145
MS.gene80828.t1 AT3G30210 64.286 98 35 0 10 107 27 124 2.09e-44 145
MS.gene80828.t1 AT4G13480 65.979 97 33 0 11 107 7 103 4.42e-44 144
MS.gene80828.t1 AT5G49620 66.990 103 34 0 5 107 21 123 1.08e-42 142
MS.gene80828.t1 AT5G59780 63.636 99 36 0 9 107 7 105 1.38e-42 139
MS.gene80828.t1 AT3G06490 66.667 105 35 0 3 107 12 116 1.57e-42 142
MS.gene80828.t1 AT5G16770 65.347 101 35 0 6 106 8 108 5.11e-42 140
MS.gene80828.t1 AT5G16770 65.347 101 35 0 6 106 8 108 5.11e-42 140
MS.gene80828.t1 AT5G16770 65.347 101 35 0 6 106 8 108 8.06e-42 140
MS.gene80828.t1 AT5G16770 65.347 101 35 0 6 106 8 108 8.06e-42 140
MS.gene80828.t1 AT3G46130 63.918 97 35 0 11 107 10 106 1.09e-41 138
MS.gene80828.t1 AT3G53200 58.559 111 45 1 5 114 4 114 2.06e-41 137
MS.gene80828.t1 AT5G14750 59.000 100 41 0 7 106 13 112 3.61e-41 135
MS.gene80828.t1 AT3G27920 54.808 104 47 0 3 106 7 110 1.48e-40 134
MS.gene80828.t1 AT5G40330 57.000 100 43 0 7 106 9 108 4.71e-40 132
MS.gene80828.t1 AT4G34990 66.316 95 32 0 12 106 14 108 6.38e-40 134
MS.gene80828.t1 AT3G02940 62.376 101 38 0 6 106 8 108 1.05e-39 134
MS.gene80828.t1 AT3G02940 62.376 101 38 0 6 106 8 108 1.37e-39 134
MS.gene80828.t1 AT3G02940 62.376 101 38 0 6 106 8 108 1.37e-39 134
MS.gene80828.t1 AT1G22640 62.887 97 36 0 10 106 12 108 1.71e-39 132
MS.gene80828.t1 AT5G06100 57.426 101 43 0 6 106 28 128 8.42e-39 135
MS.gene80828.t1 AT5G49620 58.974 117 34 1 5 107 21 137 8.45e-39 132
MS.gene80828.t1 AT1G35515 62.887 97 36 0 10 106 12 108 8.51e-39 129
MS.gene80828.t1 AT4G09460 63.158 95 35 0 12 106 14 108 1.86e-38 129
MS.gene80828.t1 AT1G09540 60.204 98 39 0 9 106 11 108 1.89e-38 132
MS.gene80828.t1 AT4G38620 63.158 95 35 0 12 106 14 108 2.27e-38 130
MS.gene80828.t1 AT5G06100 57.426 101 43 0 6 106 28 128 2.32e-38 135
MS.gene80828.t1 AT5G06100 57.426 101 43 0 6 106 28 128 2.32e-38 135
MS.gene80828.t1 AT5G06100 57.426 101 43 0 6 106 28 128 2.32e-38 135
MS.gene80828.t1 AT5G06100 57.426 101 43 0 6 106 28 128 2.32e-38 135
MS.gene80828.t1 AT2G16720 60.825 97 38 0 10 106 12 108 2.86e-38 129
MS.gene80828.t1 AT3G13540 58.763 97 40 0 10 106 23 119 4.08e-38 129
MS.gene80828.t1 AT3G23250 60.825 97 38 0 10 106 12 108 9.43e-38 129
MS.gene80828.t1 AT1G57560 55.238 105 47 0 9 113 11 115 1.25e-37 128
MS.gene80828.t1 AT3G62610 60.825 97 38 0 10 106 12 108 1.33e-37 129
MS.gene80828.t1 AT1G57560 55.238 105 47 0 9 113 11 115 2.09e-37 128
MS.gene80828.t1 AT5G26660 54.286 105 48 0 9 113 11 115 3.32e-37 129
MS.gene80828.t1 AT5G49330 59.794 97 39 0 10 106 12 108 3.36e-37 129
MS.gene80828.t1 AT3G11440 55.670 97 43 0 10 106 41 137 3.59e-37 130
MS.gene80828.t1 AT4G28110 58.416 101 42 0 6 106 8 108 4.91e-37 127
MS.gene80828.t1 AT2G32460 56.701 97 42 0 10 106 6 102 5.14e-37 130
MS.gene80828.t1 AT3G61250 57.732 97 41 0 10 106 12 108 5.66e-37 127
MS.gene80828.t1 AT2G32460 56.701 97 42 0 10 106 18 114 5.72e-37 130
MS.gene80828.t1 AT4G01680 53.333 105 49 0 9 113 11 115 6.52e-37 125
MS.gene80828.t1 AT5G61420 59.794 97 39 0 10 106 12 108 7.07e-37 128
MS.gene80828.t1 AT2G47460 58.763 97 40 0 10 106 12 108 7.33e-37 128
MS.gene80828.t1 AT5G07690 59.794 97 39 0 10 106 12 108 8.74e-37 127
MS.gene80828.t1 AT2G26960 52.336 107 47 1 4 106 10 116 9.98e-37 129
MS.gene80828.t1 AT5G35550 59.184 98 40 0 9 106 13 110 1.10e-36 125
MS.gene80828.t1 AT3G11440 55.670 97 43 0 10 106 41 137 1.19e-36 130
MS.gene80828.t1 AT3G11440 55.670 97 43 0 10 106 41 137 1.19e-36 130
MS.gene80828.t1 AT3G11440 55.670 97 43 0 10 106 41 137 1.19e-36 130
MS.gene80828.t1 AT3G08500 54.286 105 48 0 9 113 29 133 1.31e-36 127
MS.gene80828.t1 AT5G65230 56.311 103 45 0 4 106 6 108 1.32e-36 126
MS.gene80828.t1 AT4G05100 60.606 99 39 0 8 106 11 109 1.41e-36 126
MS.gene80828.t1 AT5G07700 58.763 97 40 0 10 106 12 108 1.55e-36 127
MS.gene80828.t1 AT5G07700 58.763 97 40 0 10 106 12 108 1.55e-36 127
MS.gene80828.t1 AT4G21440 58.586 99 41 0 8 106 10 108 3.92e-36 126
MS.gene80828.t1 AT4G26930 54.639 97 44 0 10 106 19 115 4.31e-36 127
MS.gene80828.t1 AT3G01140 57.426 101 43 0 6 106 8 108 5.12e-36 125
MS.gene80828.t1 AT4G01680 53.333 105 49 0 9 113 11 115 6.96e-36 125
MS.gene80828.t1 AT5G54230 56.701 97 42 0 10 106 12 108 7.55e-36 124
MS.gene80828.t1 AT3G01140 57.426 101 43 0 6 106 51 151 7.97e-36 126
MS.gene80828.t1 AT3G13890 53.061 98 46 0 9 106 11 108 8.83e-36 125
MS.gene80828.t1 AT5G10280 53.922 102 47 0 5 106 7 108 1.38e-35 124
MS.gene80828.t1 AT1G18570 58.763 97 40 0 10 106 13 109 1.66e-35 124
MS.gene80828.t1 AT5G55020 54.639 97 44 0 10 106 26 122 1.83e-35 127
MS.gene80828.t1 AT5G52600 53.846 104 48 0 10 113 12 115 2.18e-35 120
MS.gene80828.t1 AT5G15310 57.732 97 41 0 10 106 12 108 3.06e-35 121
MS.gene80828.t1 AT1G63910 55.102 98 44 0 9 106 11 108 3.10e-35 124
MS.gene80828.t1 AT1G06180 58.763 97 40 0 10 106 12 108 3.30e-35 121
MS.gene80828.t1 AT1G74430 53.704 108 50 0 6 113 8 115 3.38e-35 122
MS.gene80828.t1 AT5G12870 50.962 104 51 0 9 112 17 120 5.01e-35 121
MS.gene80828.t1 AT3G27810 72.059 68 19 0 40 107 1 68 7.86e-35 118
MS.gene80828.t1 AT5G60890 56.701 97 42 0 10 106 12 108 8.96e-35 121
MS.gene80828.t1 AT5G15310 57.732 97 41 0 10 106 12 108 9.61e-35 122
MS.gene80828.t1 AT1G34670 57.426 101 43 0 6 106 8 108 9.67e-35 122
MS.gene80828.t1 AT5G15310 57.732 97 41 0 10 106 12 108 9.90e-35 121
MS.gene80828.t1 AT1G66370 58.763 97 40 0 10 106 8 104 1.09e-34 120
MS.gene80828.t1 AT2G31180 56.701 97 42 0 10 106 12 108 1.16e-34 120
MS.gene80828.t1 AT1G79180 54.455 101 46 0 6 106 10 110 1.58e-34 120
MS.gene80828.t1 AT3G48920 48.246 114 54 1 5 113 13 126 3.33e-34 119
MS.gene80828.t1 AT5G40350 73.846 65 17 0 43 107 5 69 6.06e-34 115
MS.gene80828.t1 AT1G74650 54.082 98 45 0 9 106 11 108 6.58e-34 120
MS.gene80828.t1 AT1G74080 56.701 97 42 0 10 106 12 108 6.60e-34 120
MS.gene80828.t1 AT4G22680 55.670 97 43 0 10 106 12 108 7.49e-34 118
MS.gene80828.t1 AT3G47600 54.639 97 44 0 10 106 12 108 9.27e-34 119
MS.gene80828.t1 AT1G66230 56.701 97 42 0 10 106 12 108 1.28e-33 118
MS.gene80828.t1 AT3G12720 44.762 105 58 0 9 113 21 125 1.55e-33 118
MS.gene80828.t1 AT4G12350 56.701 97 42 0 10 106 12 108 1.68e-33 117
MS.gene80828.t1 AT5G62470 54.639 97 44 0 10 106 12 108 3.36e-33 118
MS.gene80828.t1 AT3G28910 52.475 101 48 0 6 106 8 108 4.07e-33 117
MS.gene80828.t1 AT5G56110 51.546 97 47 0 10 106 12 108 4.38e-33 117
MS.gene80828.t1 AT3G28470 49.505 101 51 0 6 106 8 108 4.45e-33 117
MS.gene80828.t1 AT5G16600 56.701 97 42 0 10 106 12 108 5.60e-33 117
MS.gene80828.t1 AT1G16490 51.485 101 49 0 6 106 10 110 6.15e-33 116
MS.gene80828.t1 AT3G13890 48.598 107 46 1 9 106 11 117 7.99e-33 117
MS.gene80828.t1 AT4G17785 54.000 100 46 0 7 106 10 109 8.97e-33 117
MS.gene80828.t1 AT1G08810 52.577 97 46 0 10 106 12 108 9.34e-33 115
MS.gene80828.t1 AT4G17785 54.000 100 46 0 7 106 10 109 1.04e-32 117
MS.gene80828.t1 AT3G12820 52.475 101 48 0 6 106 10 110 1.07e-32 114
MS.gene80828.t1 AT5G14340 55.670 97 43 0 10 106 24 120 1.47e-32 115
MS.gene80828.t1 AT5G52260 53.922 102 47 0 11 112 13 114 1.85e-32 114
MS.gene80828.t1 AT1G66380 57.732 97 41 0 10 106 8 104 2.08e-32 110
MS.gene80828.t1 AT4G01680 47.863 117 49 1 9 113 11 127 2.12e-32 116
MS.gene80828.t1 AT5G23000 52.941 102 47 1 6 106 8 109 2.53e-32 115
MS.gene80828.t1 AT1G56160 51.485 101 49 0 6 106 10 110 2.89e-32 115
MS.gene80828.t1 AT4G37780 52.941 102 47 1 6 106 8 109 3.37e-32 115
MS.gene80828.t1 AT4G25560 52.041 98 47 0 11 108 11 108 3.95e-32 114
MS.gene80828.t1 AT5G62320 51.852 108 45 1 6 106 9 116 4.20e-32 113
MS.gene80828.t1 AT1G18710 50.000 108 54 0 6 113 8 115 1.22e-31 112
MS.gene80828.t1 AT3G46130 71.642 67 19 0 41 107 8 74 1.59e-31 111
MS.gene80828.t1 AT1G56650 58.763 97 40 0 10 106 8 104 1.78e-31 111
MS.gene80828.t1 AT5G65790 54.902 102 45 1 6 106 8 109 7.71e-31 112
MS.gene80828.t1 AT3G60460 48.485 99 50 1 9 106 10 108 8.46e-31 111
MS.gene80828.t1 AT5G59780 72.308 65 18 0 43 107 20 84 1.04e-30 108
MS.gene80828.t1 AT5G62470 53.608 97 44 1 10 106 12 107 1.10e-30 112
MS.gene80828.t1 AT3G49690 53.922 102 46 1 6 106 8 109 1.11e-30 111
MS.gene80828.t1 AT3G46130 72.308 65 18 0 43 107 20 84 1.34e-30 109
MS.gene80828.t1 AT1G66390 58.763 97 40 0 10 106 8 104 2.39e-30 108
MS.gene80828.t1 AT2G36890 51.961 102 48 1 6 106 8 109 6.96e-30 108
MS.gene80828.t1 AT5G57620 52.941 102 47 1 6 106 8 109 7.87e-30 109
MS.gene80828.t1 AT2G36890 51.961 102 48 1 6 106 49 150 1.10e-29 108
MS.gene80828.t1 AT3G53200 64.384 73 25 1 43 114 9 81 1.18e-29 105
MS.gene80828.t1 AT1G79180 41.045 134 46 1 6 106 10 143 7.39e-28 103
MS.gene80828.t1 AT5G26660 60.563 71 28 0 43 113 14 84 6.30e-27 101
MS.gene80828.t1 AT2G26950 43.434 99 56 0 12 110 18 116 7.31e-27 102
MS.gene80828.t1 AT5G35550 64.286 70 25 0 37 106 44 113 6.11e-26 97.8
MS.gene80828.t1 AT5G14750 67.213 61 20 0 46 106 18 78 7.97e-26 95.1
MS.gene80828.t1 AT3G12820 67.213 61 20 0 46 106 2 62 1.88e-25 94.7
MS.gene80828.t1 AT3G27785 45.631 103 53 2 12 113 189 289 4.26e-25 98.2
MS.gene80828.t1 AT5G02320 42.857 105 59 1 9 113 124 227 7.08e-24 95.1
MS.gene80828.t1 AT5G02320 36.458 96 59 2 12 106 75 169 5.49e-11 58.5
MS.gene80828.t1 AT5G02320 42.857 105 59 1 9 113 124 227 7.08e-24 95.1
MS.gene80828.t1 AT5G02320 36.458 96 59 2 12 106 75 169 5.49e-11 58.5
MS.gene80828.t1 AT5G58850 44.340 106 56 2 10 114 103 206 1.05e-23 94.4
MS.gene80828.t1 AT4G18770 42.308 104 59 1 10 113 215 317 1.20e-23 94.0
MS.gene80828.t1 AT5G02320 44.898 98 53 1 9 106 64 160 1.74e-23 94.0
MS.gene80828.t1 AT5G11050 44.231 104 55 2 12 114 105 206 1.91e-23 93.6
MS.gene80828.t1 AT3G09230 45.192 104 56 1 12 115 55 157 2.30e-23 92.8
MS.gene80828.t1 AT3G09370 41.905 105 60 1 9 113 140 243 2.68e-23 93.6
MS.gene80828.t1 AT3G09370 37.500 96 58 2 12 106 91 185 9.39e-11 57.8
MS.gene80828.t1 AT3G09370 41.905 105 60 1 9 113 132 235 4.48e-23 92.8
MS.gene80828.t1 AT3G09370 41.905 105 60 1 9 113 127 230 4.75e-23 92.8
MS.gene80828.t1 AT2G23290 46.316 95 50 1 12 106 13 106 5.27e-23 90.9
MS.gene80828.t1 AT3G47600 62.500 64 24 0 43 106 39 102 1.26e-22 90.1
MS.gene80828.t1 AT5G40360 42.000 100 55 2 12 110 158 255 1.30e-22 90.5
MS.gene80828.t1 AT4G33450 44.000 100 55 1 10 109 17 115 1.92e-22 88.6
MS.gene80828.t1 AT4G37260 44.211 95 52 1 12 106 13 106 3.04e-22 89.0
MS.gene80828.t1 AT5G17800 44.211 95 52 1 12 106 93 186 3.45e-22 89.0
MS.gene80828.t1 AT1G69560 43.564 101 54 2 10 109 105 203 6.34e-22 88.2
MS.gene80828.t1 AT1G69560 43.564 101 54 2 10 109 121 219 6.69e-22 88.6
MS.gene80828.t1 AT2G39880 45.833 96 49 2 12 106 50 143 9.64e-22 88.2
MS.gene80828.t1 AT1G66380 55.128 78 35 0 10 87 8 85 1.12e-21 82.8
MS.gene80828.t1 AT5G11510 42.593 108 58 3 9 114 78 183 1.29e-21 89.0
MS.gene80828.t1 AT1G17950 46.465 99 50 2 12 109 5 101 1.31e-21 86.3
MS.gene80828.t1 AT5G11510 42.593 108 58 3 9 114 78 183 1.34e-21 89.0
MS.gene80828.t1 AT5G11510 42.593 108 58 3 9 114 78 183 1.34e-21 89.0
MS.gene80828.t1 AT5G11510 42.593 108 58 3 9 114 78 183 1.34e-21 89.0
MS.gene80828.t1 AT5G11510 42.593 108 58 3 9 114 78 183 1.40e-21 88.6
MS.gene80828.t1 AT1G26780 44.000 100 55 1 10 109 96 194 2.83e-21 85.9
MS.gene80828.t1 AT4G32730 38.318 107 64 2 9 114 84 189 3.85e-21 87.4
MS.gene80828.t1 AT4G32730 34.375 96 61 2 12 106 35 129 1.69e-11 60.1
MS.gene80828.t1 AT4G32730 38.318 107 64 2 9 114 84 189 3.85e-21 87.4
MS.gene80828.t1 AT4G32730 34.375 96 61 2 12 106 35 129 1.69e-11 60.1
MS.gene80828.t1 AT4G32730 38.318 107 64 2 9 114 84 189 3.85e-21 87.4
MS.gene80828.t1 AT4G32730 34.375 96 61 2 12 106 35 129 1.69e-11 60.1
MS.gene80828.t1 AT4G32730 38.318 107 64 2 9 114 84 189 3.85e-21 87.4
MS.gene80828.t1 AT4G32730 34.375 96 61 2 12 106 35 129 1.69e-11 60.1
MS.gene80828.t1 AT2G37630 42.157 102 57 1 15 114 7 108 4.13e-21 86.7
MS.gene80828.t1 AT3G29020 43.158 95 53 1 12 106 65 158 4.49e-21 84.3
MS.gene80828.t1 AT1G26780 44.000 100 55 1 10 109 96 194 4.99e-21 86.3
MS.gene80828.t1 AT3G55730 45.833 96 49 2 12 106 56 149 5.13e-21 86.7
MS.gene80828.t1 AT3G29020 43.158 95 53 1 12 106 67 160 1.07e-20 84.7
MS.gene80828.t1 AT1G73410 44.898 98 53 1 12 109 6 102 1.69e-20 82.4
MS.gene80828.t1 AT1G73410 44.898 98 53 1 12 109 6 102 2.02e-20 82.8
MS.gene80828.t1 AT5G67300 41.053 95 55 1 12 106 6 99 4.59e-20 83.2
MS.gene80828.t1 AT1G66380 62.500 64 24 0 43 106 8 71 1.18e-19 77.8
MS.gene80828.t1 AT5G39700 38.393 112 68 1 1 112 45 155 1.54e-19 79.7
MS.gene80828.t1 AT4G32730 38.318 107 64 2 9 114 84 189 2.93e-19 82.0
MS.gene80828.t1 AT3G50060 40.000 95 56 1 12 106 6 99 5.62e-19 80.1
MS.gene80828.t1 AT2G25230 40.367 109 60 2 8 112 22 129 1.75e-18 77.8
MS.gene80828.t1 AT1G22640 66.667 51 17 0 56 106 1 51 2.91e-18 76.6
MS.gene80828.t1 AT5G14750 62.745 51 19 0 56 106 1 51 4.19e-18 74.7
MS.gene80828.t1 AT5G14750 62.745 51 19 0 56 106 1 51 4.19e-18 74.7
MS.gene80828.t1 AT3G23250 66.667 51 17 0 56 106 1 51 6.87e-18 75.9
MS.gene80828.t1 AT2G02820 39.423 104 59 2 6 106 21 123 4.46e-17 75.1
MS.gene80828.t1 AT4G00540 41.176 102 58 2 7 106 98 199 4.78e-17 75.5
MS.gene80828.t1 AT4G00540 41.176 102 58 2 7 106 96 197 5.94e-17 75.5
MS.gene80828.t1 AT2G02820 39.423 104 59 2 6 106 21 123 9.83e-17 74.7
MS.gene80828.t1 AT2G02820 39.423 104 59 2 6 106 21 123 1.10e-16 74.7
MS.gene80828.t1 AT1G71030 46.575 73 38 1 34 106 5 76 2.58e-16 71.2
MS.gene80828.t1 AT1G14350 40.217 92 54 1 15 106 28 118 5.98e-16 72.4
MS.gene80828.t1 AT1G14350 40.217 92 54 1 15 106 28 118 5.98e-16 72.4
MS.gene80828.t1 AT1G71030 51.724 58 28 0 49 106 5 62 8.81e-16 69.7
MS.gene80828.t1 AT5G59780 70.000 40 12 0 68 107 1 40 1.49e-15 68.9
MS.gene80828.t1 AT3G46130 70.000 40 12 0 68 107 1 40 2.05e-15 68.9
MS.gene80828.t1 AT5G40430 33.945 109 66 3 8 112 50 156 1.20e-14 67.8
MS.gene80828.t1 AT1G18960 43.750 64 34 1 43 106 40 101 1.34e-13 65.5
MS.gene80828.t1 AT3G18100 37.755 98 58 2 11 107 332 427 7.27e-13 63.9
MS.gene80828.t1 AT3G18100 37.755 98 58 2 11 107 497 592 8.26e-13 63.5
MS.gene80828.t1 AT3G18100 37.755 98 58 2 11 107 384 479 8.64e-13 63.5
MS.gene80828.t1 AT3G18100 37.755 98 58 2 11 107 545 640 9.42e-13 63.5

Find 21 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCATTGTCTGTTCTTCC+TGG 0.248753 6.2:+82686755 None:intergenic
TTATGATAATTGTAGGATTA+AGG 0.277246 6.2:-82687081 MS.gene80828:intron
AAGTTTCCTCTCTTTATGTT+TGG 0.340228 6.2:+82687013 None:intergenic
AATTTCTTGGCTATGAGTTC+AGG 0.367797 6.2:-82687377 MS.gene80828:intron
TCCACTCGAAGTGGGGAAAC+AGG 0.405467 6.2:-82686958 MS.gene80828:intron
TGAAGGGAGATGGAATTTCT+TGG 0.408000 6.2:-82687390 MS.gene80828:CDS
AGATGATAATGAACTTAGAA+AGG 0.477972 6.2:-82687468 MS.gene80828:CDS
ATCAAACACATTGCTAATCA+TGG 0.478221 6.2:-82687413 MS.gene80828:CDS
CTAATCATGGTGAAGGGAGA+TGG 0.493171 6.2:-82687400 MS.gene80828:CDS
GATGATAATGAACTTAGAAA+GGG 0.505183 6.2:-82687467 MS.gene80828:CDS
ATTGTAGGATTAAGGAGGAC+AGG 0.509642 6.2:-82687073 MS.gene80828:intron
ACCTGTTTCCCCACTTCGAG+TGG 0.528762 6.2:+82686957 None:intergenic
CACATTGCTAATCATGGTGA+AGG 0.537248 6.2:-82687407 MS.gene80828:CDS
AGGATTGCACAAAACATGCC+AGG 0.567167 6.2:-82686773 MS.gene80828:CDS
ATGAACTTAGAAAGGGACAT+TGG 0.569263 6.2:-82687460 MS.gene80828:CDS
TTAAAGCCAAACATAAAGAG+AGG 0.593066 6.2:-82687019 MS.gene80828:CDS
TGATAATTGTAGGATTAAGG+AGG 0.597540 6.2:-82687078 MS.gene80828:intron
TTTGAACTCCACTCGAAGTG+GGG 0.618894 6.2:-82686965 MS.gene80828:CDS
GGGACATTGGACTCTTGAAG+AGG 0.637178 6.2:-82687447 MS.gene80828:CDS
ACATTGCTAATCATGGTGAA+GGG 0.652661 6.2:-82687406 MS.gene80828:CDS
GATTAGCAATGTGTTTGATG+AGG 0.678454 6.2:+82687417 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATAAGTACAAAATTT+GGG - chr6.2:82686910-82686929 MS.gene80828:intron 10.0%
!!! AAATTTTGTACTTATTTATT+GGG + chr6.2:82686910-82686929 None:intergenic 10.0%
!! CAATAAATAAGTACAAAATT+TGG - chr6.2:82686909-82686928 MS.gene80828:intron 15.0%
!!! AAGAACTAAGAAATTTTTTT+AGG + chr6.2:82686969-82686988 None:intergenic 15.0%
!!! AATTTTGTACTTATTTATTG+GGG + chr6.2:82686909-82686928 None:intergenic 15.0%
!!! AGAACTAAGAAATTTTTTTA+GGG + chr6.2:82686968-82686987 None:intergenic 15.0%
!!! CAAATTTTGTACTTATTTAT+TGG + chr6.2:82686911-82686930 None:intergenic 15.0%
!! ACAATGAAATCAAAAACTAT+TGG - chr6.2:82687452-82687471 MS.gene80828:CDS 20.0%
!! TTATGATAATTGTAGGATTA+AGG - chr6.2:82687113-82687132 MS.gene80828:intron 20.0%
! AGTTGTGTTTACAAATAGTT+TGG - chr6.2:82687275-82687294 MS.gene80828:intron 25.0%
! CAGCTAATTATGATAATTGT+AGG - chr6.2:82687106-82687125 MS.gene80828:intron 25.0%
!! AATCAAAAACTTTTCTTCTG+TGG + chr6.2:82687209-82687228 None:intergenic 25.0%
!! AGATGATAATGAACTTAGAA+AGG - chr6.2:82686726-82686745 MS.gene80828:CDS 25.0%
!! GATGATAATGAACTTAGAAA+GGG - chr6.2:82686727-82686746 MS.gene80828:CDS 25.0%
!! TATTTCTCTTGTGGATTTTT+AGG - chr6.2:82687392-82687411 MS.gene80828:CDS 25.0%
AAGTTTCCTCTCTTTATGTT+TGG + chr6.2:82687184-82687203 None:intergenic 30.0%
ATCAAACACATTGCTAATCA+TGG - chr6.2:82686781-82686800 MS.gene80828:CDS 30.0%
CAAATAGTTTGGATTCTCTA+CGG - chr6.2:82687286-82687305 MS.gene80828:intron 30.0%
GAAAAAGCTGTAGATTAAGA+TGG - chr6.2:82687143-82687162 MS.gene80828:intron 30.0%
GAAATCAAAAACTATTGGAG+AGG - chr6.2:82687457-82687476 MS.gene80828:CDS 30.0%
TGATAATTGTAGGATTAAGG+AGG - chr6.2:82687116-82687135 MS.gene80828:intron 30.0%
TTAAAGCCAAACATAAAGAG+AGG - chr6.2:82687175-82687194 MS.gene80828:intron 30.0%
! ACCCCCTAAACAAAAATTTT+GGG + chr6.2:82686937-82686956 None:intergenic 30.0%
! CTAGTTAATCTCGTTTGTTT+TGG - chr6.2:82687364-82687383 MS.gene80828:intron 30.0%
! TTGGATTCTTATTTCTCTTG+TGG - chr6.2:82687383-82687402 MS.gene80828:CDS 30.0%
!! GGTCCCAAAATTTTTGTTTA+GGG - chr6.2:82686931-82686950 MS.gene80828:intron 30.0%
!! GTCCCAAAATTTTTGTTTAG+GGG - chr6.2:82686932-82686951 MS.gene80828:intron 30.0%
!! TCCCAAAATTTTTGTTTAGG+GGG - chr6.2:82686933-82686952 MS.gene80828:intron 30.0%
AAATACCATATGTTGCACTC+AGG + chr6.2:82687067-82687086 None:intergenic 35.0%
AATACCATATGTTGCACTCA+GGG + chr6.2:82687066-82687085 None:intergenic 35.0%
AATTTCTTGGCTATGAGTTC+AGG - chr6.2:82686817-82686836 MS.gene80828:intron 35.0%
ACATTGCTAATCATGGTGAA+GGG - chr6.2:82686788-82686807 MS.gene80828:intron 35.0%
ATAGCTAAGACCCAAATTGT+AGG - chr6.2:82687008-82687027 MS.gene80828:CDS 35.0%
ATGAACTTAGAAAGGGACAT+TGG - chr6.2:82686734-82686753 MS.gene80828:CDS 35.0%
ATTTCATTGTCTGTTCTTCC+TGG + chr6.2:82687442-82687461 None:intergenic 35.0%
GATTAGCAATGTGTTTGATG+AGG + chr6.2:82686780-82686799 None:intergenic 35.0%
TACTTATTTATTGGGGCCTA+GGG + chr6.2:82686902-82686921 None:intergenic 35.0%
TTAGGGCAAACCTACAATTT+GGG + chr6.2:82687021-82687040 None:intergenic 35.0%
! GACCCCCTAAACAAAAATTT+TGG + chr6.2:82686938-82686957 None:intergenic 35.0%
!! GGGTCCCAAAATTTTTGTTT+AGG - chr6.2:82686930-82686949 MS.gene80828:intron 35.0%
!! TTCTCTTGTGGATTTTTAGG+TGG - chr6.2:82687395-82687414 MS.gene80828:CDS 35.0%
!! TTTTGTTTAGGGGGTCTATT+AGG - chr6.2:82686942-82686961 MS.gene80828:intron 35.0%
ATTGTAGGATTAAGGAGGAC+AGG - chr6.2:82687121-82687140 MS.gene80828:intron 40.0%
CACATTGCTAATCATGGTGA+AGG - chr6.2:82686787-82686806 MS.gene80828:intron 40.0%
CTTAGGGCAAACCTACAATT+TGG + chr6.2:82687022-82687041 None:intergenic 40.0%
GTACTTATTTATTGGGGCCT+AGG + chr6.2:82686903-82686922 None:intergenic 40.0%
TGAAGGGAGATGGAATTTCT+TGG - chr6.2:82686804-82686823 MS.gene80828:intron 40.0%
! TTTTGAACTCCACTCGAAGT+GGG - chr6.2:82687228-82687247 MS.gene80828:intron 40.0%
! TTTTTGAACTCCACTCGAAG+TGG - chr6.2:82687227-82687246 MS.gene80828:intron 40.0%
!! AAAAGTTTGCTAGTGCAACC+AGG - chr6.2:82686843-82686862 MS.gene80828:intron 40.0%
!! AAAGTTTGCTAGTGCAACCA+GGG - chr6.2:82686844-82686863 MS.gene80828:intron 40.0%
!!! TGTGGATTTTTAGGTGGTCA+AGG - chr6.2:82687401-82687420 MS.gene80828:CDS 40.0%
AGCCACCAAAATCCCAGAAA+CGG - chr6.2:82687040-82687059 MS.gene80828:CDS 45.0%
AGGATTGCACAAAACATGCC+AGG - chr6.2:82687421-82687440 MS.gene80828:CDS 45.0%
CTAATCATGGTGAAGGGAGA+TGG - chr6.2:82686794-82686813 MS.gene80828:intron 45.0%
TACAATTGCTACAGAGCCGA+TGG - chr6.2:82687325-82687344 MS.gene80828:intron 45.0%
TTATTTATTGGGGCCTAGGG+CGG + chr6.2:82686899-82686918 None:intergenic 45.0%
TTTGAACTCCACTCGAAGTG+GGG - chr6.2:82687229-82687248 MS.gene80828:intron 45.0%
! ATCGGCTCTGTAGCAATTGT+AGG + chr6.2:82687326-82687345 None:intergenic 45.0%
!! TCTGGGATTTTGGTGGCTTA+GGG + chr6.2:82687038-82687057 None:intergenic 45.0%
!!! TTCTGGGATTTTGGTGGCTT+AGG + chr6.2:82687039-82687058 None:intergenic 45.0%
GGGACATTGGACTCTTGAAG+AGG - chr6.2:82686747-82686766 MS.gene80828:CDS 50.0%
ACCTGTTTCCCCACTTCGAG+TGG + chr6.2:82687240-82687259 None:intergenic 55.0%
ACGGCCCTGAGTGCAACATA+TGG - chr6.2:82687059-82687078 MS.gene80828:CDS 55.0%
TCCACTCGAAGTGGGGAAAC+AGG - chr6.2:82687236-82687255 MS.gene80828:intron 55.0%
TCTTCGCCCTGCCTCAGATA+CGG + chr6.2:82686870-82686889 None:intergenic 55.0%
TTGCACTCAGGGCCGTTTCT+GGG + chr6.2:82687055-82687074 None:intergenic 55.0%
! TATCTGAGGCAGGGCGAAGA+GGG - chr6.2:82686870-82686889 MS.gene80828:intron 55.0%
!! CTACACCGCTCTAGAGCCAT+CGG + chr6.2:82687344-82687363 None:intergenic 55.0%
!!! CAGGGCCGTTTCTGGGATTT+TGG + chr6.2:82687048-82687067 None:intergenic 55.0%
!!! GGCCGTTTCTGGGATTTTGG+TGG + chr6.2:82687045-82687064 None:intergenic 55.0%
GTTGCACTCAGGGCCGTTTC+TGG + chr6.2:82687056-82687075 None:intergenic 60.0%
TGCAACCAGGGCCGTATCTG+AGG - chr6.2:82686856-82686875 MS.gene80828:intron 60.0%
! GTATCTGAGGCAGGGCGAAG+AGG - chr6.2:82686869-82686888 MS.gene80828:intron 60.0%
!! CAGAGCCGATGGCTCTAGAG+CGG - chr6.2:82687336-82687355 MS.gene80828:intron 60.0%
! ACCAGGGCCGTATCTGAGGC+AGG - chr6.2:82686860-82686879 MS.gene80828:intron 65.0%
! CCAGGGCCGTATCTGAGGCA+GGG - chr6.2:82686861-82686880 MS.gene80828:intron 65.0%
CCCTGCCTCAGATACGGCCC+TGG + chr6.2:82686864-82686883 None:intergenic 70.0%
GCGAAGAGGGCGACCGCCCT+AGG - chr6.2:82686883-82686902 MS.gene80828:intron 75.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 82686712 82687504 82686712 ID=MS.gene80828
chr6.2 mRNA 82686712 82687504 82686712 ID=MS.gene80828.t1;Parent=MS.gene80828
chr6.2 exon 82687378 82687504 82687378 ID=MS.gene80828.t1.exon1;Parent=MS.gene80828.t1
chr6.2 CDS 82687378 82687504 82687378 ID=cds.MS.gene80828.t1;Parent=MS.gene80828.t1
chr6.2 exon 82686959 82687088 82686959 ID=MS.gene80828.t1.exon2;Parent=MS.gene80828.t1
chr6.2 CDS 82686959 82687088 82686959 ID=cds.MS.gene80828.t1;Parent=MS.gene80828.t1
chr6.2 exon 82686712 82686802 82686712 ID=MS.gene80828.t1.exon3;Parent=MS.gene80828.t1
chr6.2 CDS 82686712 82686802 82686712 ID=cds.MS.gene80828.t1;Parent=MS.gene80828.t1
Gene Sequence

>MS.gene80828

ATGTATAATAGTAAAGATGATAATGAACTTAGAAAGGGACATTGGACTCTTGAAGAGGATGATCTCCTCATCAAACACATTGCTAATCATGGTGAAGGGAGATGGAATTTCTTGGCTATGAGTTCAGGTTAAAAAGTTTGCTAGTGCAACCAGGGCCGTATCTGAGGCAGGGCGAAGAGGGCGACCGCCCTAGGCCCCAATAAATAAGTACAAAATTTGGGTCCCAAAATTTTTGTTTAGGGGGTCTATTAGGCCCTAAAAAAATTTCTTAGTTCTTTGTATCAAGTTTGATGTTTATAGCTAAGACCCAAATTGTAGGTTTGCCCTAAGCCACCAAAATCCCAGAAACGGCCCTGAGTGCAACATATGGTATTTTTTCTGCAAGATATGAGTTCAGCTAATTATGATAATTGTAGGATTAAGGAGGACAGGAAAAAGCTGTAGATTAAGATGGCTAAATTATTTAAAGCCAAACATAAAGAGAGGAAACTTAACCACAGAAGAAAAGTTTTTGATTTTTGAACTCCACTCGAAGTGGGGAAACAGGTACTTATCTTAGTCTTAGTTGTGTTTACAAATAGTTTGGATTCTCTACGGTAGCTGCAGCTGCGCCTACAATTGCTACAGAGCCGATGGCTCTAGAGCGGTGTAGCTAGTTAATCTCGTTTGTTTTGGATTCTTATTTCTCTTGTGGATTTTTAGGTGGTCAAGGATTGCACAAAACATGCCAGGAAGAACAGACAATGAAATCAAAAACTATTGGAGAGGAGTAAGAAACAAGCAAGACATTTAG
Protein sequence

>MS.gene80828.t1

MYNSKDDNELRKGHWTLEEDDLLIKHIANHGEGRWNFLAMSSGLRRTGKSCRLRWLNYLKPNIKRGNLTTEEKFLIFELHSKWGNRWSRIAQNMPGRTDNEIKNYWRGVRNKQDI