AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80858

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80858.t1 MTR_7g035300 39.506 243 96 12 21 225 4 233 9.54e-41 139
MS.gene80858.t1 MTR_7g037260 37.037 216 67 4 73 224 147 357 1.40e-38 137
MS.gene80858.t1 MTR_7g037130 35.648 216 70 4 73 224 147 357 1.99e-34 126
MS.gene80858.t1 MTR_7g451170 53.398 103 47 1 73 175 193 294 3.25e-34 126
MS.gene80858.t1 MTR_3g463400 44.167 120 66 1 73 192 135 253 3.65e-32 121
MS.gene80858.t1 MTR_4g088015 50.485 103 50 1 73 175 223 324 4.24e-32 121
MS.gene80858.t1 MTR_7g450950 56.122 98 42 1 73 170 159 255 1.24e-31 118
MS.gene80858.t1 MTR_3g077650 50.485 103 50 1 73 175 183 284 1.86e-31 119
MS.gene80858.t1 MTR_1g057980 46.154 117 55 2 73 189 82 190 3.70e-31 116
MS.gene80858.t1 MTR_4g105660 47.573 103 53 1 73 175 182 283 5.39e-30 115
MS.gene80858.t1 MTR_7g035350 38.816 152 61 2 74 194 228 378 5.38e-29 113
MS.gene80858.t1 MTR_5g070020 46.602 103 54 1 73 175 124 225 5.54e-29 111
MS.gene80858.t1 MTR_5g049190 47.619 105 54 1 73 177 21 124 1.19e-28 108
MS.gene80858.t1 MTR_1g026870 42.553 94 53 1 74 167 88 180 1.91e-22 95.5
MS.gene80858.t1 MTR_1g026870 33.333 93 62 0 73 165 35 127 2.47e-14 72.0
MS.gene80858.t1 MTR_7g061330 44.681 94 51 1 74 167 116 208 2.22e-22 95.1
MS.gene80858.t1 MTR_7g461410 44.681 94 51 1 74 167 116 208 2.22e-22 95.1
MS.gene80858.t1 MTR_7g061330 44.681 94 51 1 74 167 80 172 2.26e-22 95.1
MS.gene80858.t1 MTR_5g038910 38.971 136 76 3 68 198 23 156 1.41e-21 92.4
MS.gene80858.t1 MTR_5g038910 38.971 136 76 3 68 198 23 156 1.64e-21 91.7
MS.gene80858.t1 MTR_3g110028 41.489 94 54 1 74 167 88 180 5.16e-21 91.3
MS.gene80858.t1 MTR_5g010650 43.011 93 52 1 74 166 113 204 1.14e-20 90.1
MS.gene80858.t1 MTR_8g468380 41.509 106 61 1 68 173 19 123 4.97e-20 88.2
MS.gene80858.t1 MTR_4g019370 38.000 100 61 1 74 173 41 139 9.99e-20 86.7
MS.gene80858.t1 MTR_6g027340 41.414 99 57 1 74 172 19 116 1.91e-19 83.2
MS.gene80858.t1 MTR_3g101290 34.211 114 74 1 74 187 40 152 1.03e-18 81.6
MS.gene80858.t1 MTR_4g082040 35.484 124 63 2 61 168 79 201 3.50e-18 82.8
MS.gene80858.t1 MTR_6g027360 40.404 99 58 1 74 172 81 178 3.57e-18 81.6
MS.gene80858.t1 MTR_4g065017 39.007 141 64 7 65 197 11 137 1.06e-17 80.5
MS.gene80858.t1 MTR_7g115650 42.708 96 49 3 74 166 17 109 1.09e-17 78.6
MS.gene80858.t1 MTR_5g041570 36.111 108 66 2 63 168 124 230 2.39e-17 80.5
MS.gene80858.t1 MTR_8g017540 37.500 104 63 2 65 167 54 156 4.81e-17 79.3
MS.gene80858.t1 MTR_8g017440 37.500 104 63 2 65 167 8 110 5.16e-17 79.0
MS.gene80858.t1 MTR_2g064160 38.947 95 56 2 74 167 16 109 5.62e-17 78.6
MS.gene80858.t1 MTR_2g089420 37.500 104 63 2 74 176 16 118 1.19e-16 78.6
MS.gene80858.t1 MTR_1g085640 30.405 148 97 5 74 219 17 160 1.51e-16 77.8
MS.gene80858.t1 MTR_3g077110 37.895 95 57 2 74 167 17 110 1.70e-16 77.4
MS.gene80858.t1 MTR_1g112760 37.895 95 57 2 74 167 18 111 1.71e-16 75.9
MS.gene80858.t1 MTR_1g045610 40.860 93 53 2 74 165 26 117 2.95e-16 75.5
MS.gene80858.t1 MTR_8g031360 36.449 107 61 3 64 166 8 111 3.06e-16 76.3
MS.gene80858.t1 MTR_1g085040 38.000 100 60 2 74 172 17 115 3.12e-16 76.6
MS.gene80858.t1 MTR_2g099740 36.538 104 64 2 65 167 8 110 3.40e-16 77.0
MS.gene80858.t1 MTR_5g088610 38.095 105 62 2 68 170 8 111 3.94e-16 76.3
MS.gene80858.t1 MTR_4g100720 38.947 95 56 2 74 167 18 111 4.42e-16 73.6
MS.gene80858.t1 MTR_8g017500 38.095 105 61 3 65 167 8 110 4.45e-16 76.3
MS.gene80858.t1 MTR_3g028740 36.842 114 60 4 65 172 18 125 4.75e-16 76.3
MS.gene80858.t1 MTR_0008s0390 34.211 114 73 2 64 176 8 120 4.92e-16 75.1
MS.gene80858.t1 MTR_6g074860 35.922 103 64 2 74 175 7 108 5.84e-16 74.7
MS.gene80858.t1 MTR_7g076740 38.614 101 55 3 70 166 13 110 6.79e-16 75.5
MS.gene80858.t1 MTR_0008s0470 35.577 104 65 2 74 176 18 120 8.06e-16 75.1
MS.gene80858.t1 MTR_2g097910 35.385 130 64 5 74 197 25 140 9.83e-16 75.1
MS.gene80858.t1 MTR_0251s0050 33.898 118 76 2 64 180 8 124 1.08e-15 74.3
MS.gene80858.t1 MTR_1g073170 38.710 93 55 2 74 165 25 116 1.08e-15 73.9
MS.gene80858.t1 MTR_4g125520 38.947 95 56 2 74 167 17 110 1.22e-15 74.7
MS.gene80858.t1 MTR_7g110830 38.542 96 57 2 74 168 17 111 1.24e-15 75.1
MS.gene80858.t1 MTR_4g105130 37.500 96 58 2 74 168 17 111 1.28e-15 75.1
MS.gene80858.t1 MTR_0197s0010 38.776 98 56 3 72 167 4 99 1.32e-15 73.6
MS.gene80858.t1 MTR_3g074520 37.864 103 62 2 65 166 8 109 1.33e-15 74.7
MS.gene80858.t1 MTR_5g062790 37.736 106 61 2 68 170 8 111 1.37e-15 74.3
MS.gene80858.t1 MTR_4g091490 34.109 129 80 3 70 197 14 138 1.40e-15 74.7
MS.gene80858.t1 MTR_1g110460 37.624 101 61 2 66 165 23 122 2.49e-15 73.9
MS.gene80858.t1 MTR_8g017390 38.542 96 56 3 74 167 17 111 2.64e-15 74.7
MS.gene80858.t1 MTR_2g089620 37.500 104 63 2 70 172 13 115 3.09e-15 73.6
MS.gene80858.t1 MTR_4g063100 35.922 103 64 2 74 175 12 113 3.34e-15 72.8
MS.gene80858.t1 MTR_5g078950 36.893 103 63 2 64 165 2 103 3.41e-15 72.8
MS.gene80858.t1 MTR_2g096380 33.858 127 81 3 74 198 11 136 3.78e-15 72.4
MS.gene80858.t1 MTR_5g007370 35.577 104 65 2 64 166 7 109 3.83e-15 73.2
MS.gene80858.t1 MTR_4g128190 36.634 101 52 2 70 170 12 100 5.13e-15 72.0
MS.gene80858.t1 MTR_1g100667 36.607 112 59 4 74 179 18 123 5.62e-15 72.4
MS.gene80858.t1 MTR_2g011660 37.000 100 61 2 74 172 18 116 5.71e-15 73.2
MS.gene80858.t1 MTR_4g478180 36.893 103 63 2 65 166 9 110 6.09e-15 73.2
MS.gene80858.t1 MTR_7g111290 38.298 94 56 2 74 166 17 109 7.25e-15 73.2
MS.gene80858.t1 MTR_3g089045 37.895 95 58 1 74 168 19 112 7.26e-15 72.4
MS.gene80858.t1 MTR_6g009430 35.714 98 61 2 74 170 17 113 7.53e-15 72.8
MS.gene80858.t1 MTR_1g086510 34.286 105 67 2 62 165 14 117 8.92e-15 71.6
MS.gene80858.t1 MTR_5g079670 37.736 106 61 4 64 167 7 109 9.27e-15 70.9
MS.gene80858.t1 MTR_1g062940 36.559 93 57 2 74 165 11 102 9.54e-15 70.9
MS.gene80858.t1 MTR_7g086960 39.394 99 59 1 74 172 92 189 1.12e-14 72.4
MS.gene80858.t1 MTR_8g017350 38.542 96 56 3 74 167 17 111 1.13e-14 72.8
MS.gene80858.t1 MTR_7g096930 35.455 110 65 3 70 176 13 119 1.15e-14 71.6
MS.gene80858.t1 MTR_8g020490 38.298 94 56 2 74 166 13 105 1.17e-14 71.2
MS.gene80858.t1 MTR_5g082910 35.106 94 60 1 74 167 22 114 1.28e-14 71.6
MS.gene80858.t1 MTR_5g088640 35.514 107 64 2 67 170 10 114 1.33e-14 71.2
MS.gene80858.t1 MTR_5g029840 35.354 99 62 2 70 167 13 110 1.36e-14 72.0
MS.gene80858.t1 MTR_8g017340 38.542 96 56 3 74 167 17 111 1.60e-14 72.4
MS.gene80858.t1 MTR_5g088080 35.514 107 64 2 67 170 10 114 1.87e-14 70.9
MS.gene80858.t1 MTR_5g088150 35.514 107 64 2 67 170 10 114 1.87e-14 70.9
MS.gene80858.t1 MTR_5g488210 35.514 107 64 2 67 170 10 114 1.87e-14 70.9
MS.gene80858.t1 MTR_3g461490 39.796 98 57 2 70 166 13 109 1.92e-14 71.2
MS.gene80858.t1 MTR_5g010020 34.615 104 66 2 65 167 8 110 2.49e-14 71.2
MS.gene80858.t1 MTR_2g089450 33.333 126 74 4 74 190 17 141 2.77e-14 70.1
MS.gene80858.t1 MTR_3g083540 38.000 100 56 3 70 166 42 138 2.94e-14 70.9
MS.gene80858.t1 MTR_5g488170 35.514 107 64 2 67 170 10 114 3.20e-14 69.7
MS.gene80858.t1 MTR_1g043050 32.680 153 83 6 70 205 13 162 3.25e-14 70.1
MS.gene80858.t1 MTR_1g021230 29.341 167 105 6 70 225 58 222 3.54e-14 71.2
MS.gene80858.t1 MTR_3g097450 37.755 98 51 4 74 166 17 109 3.62e-14 70.5
MS.gene80858.t1 MTR_8g027345 35.052 97 57 3 74 167 17 110 3.67e-14 70.5
MS.gene80858.t1 MTR_7g035075 38.710 93 55 2 74 165 19 110 4.14e-14 68.9
MS.gene80858.t1 MTR_8g098860 34.615 104 66 2 65 167 8 110 4.18e-14 70.5
MS.gene80858.t1 MTR_4g102380 37.755 98 59 2 70 166 13 109 4.47e-14 69.7
MS.gene80858.t1 MTR_4g485530 38.144 97 54 3 74 167 17 110 4.65e-14 68.6
MS.gene80858.t1 MTR_4g121460 38.614 101 56 3 70 167 13 110 5.58e-14 70.1
MS.gene80858.t1 MTR_0247s0040 39.423 104 59 3 65 166 3 104 6.32e-14 67.8
MS.gene80858.t1 MTR_4g029540 37.288 118 67 5 64 176 2 117 6.41e-14 69.7
MS.gene80858.t1 MTR_2g034790 39.604 101 55 3 70 167 13 110 6.71e-14 70.1
MS.gene80858.t1 MTR_1g086530 34.286 105 65 3 74 175 38 141 6.99e-14 69.3
MS.gene80858.t1 MTR_7g017260 37.383 107 63 2 64 167 20 125 7.72e-14 69.3
MS.gene80858.t1 MTR_4g073420 36.735 98 52 4 74 166 17 109 7.76e-14 69.3
MS.gene80858.t1 MTR_6g006030 36.634 101 62 2 66 165 11 110 8.40e-14 68.2
MS.gene80858.t1 MTR_1g100653 35.455 110 63 4 70 174 13 119 9.06e-14 69.3
MS.gene80858.t1 MTR_8g006470 38.384 99 58 3 74 170 15 112 1.01e-13 68.9
MS.gene80858.t1 MTR_8g095390 35.354 99 52 4 74 166 17 109 1.02e-13 69.3
MS.gene80858.t1 MTR_7g117730 34.021 97 58 3 74 167 17 110 1.09e-13 68.6
MS.gene80858.t1 MTR_1g008970 44.000 75 40 2 94 167 113 186 1.12e-13 68.6
MS.gene80858.t1 MTR_5g078140 39.394 99 50 4 74 167 17 110 1.16e-13 69.3
MS.gene80858.t1 MTR_4g082290 33.083 133 84 3 70 201 13 141 1.25e-13 69.3
MS.gene80858.t1 MTR_3g052450 33.028 109 71 2 65 172 36 143 1.28e-13 69.7
MS.gene80858.t1 MTR_3g065440 39.394 99 50 4 74 167 17 110 1.32e-13 68.9
MS.gene80858.t1 MTR_4g094982 32.979 94 62 1 74 167 8 100 1.70e-13 68.2
MS.gene80858.t1 MTR_5g079290 37.895 95 55 3 74 166 22 114 2.12e-13 67.8
MS.gene80858.t1 MTR_5g078910 38.298 94 54 3 74 165 12 103 2.17e-13 68.2
MS.gene80858.t1 MTR_7g010210 33.051 118 77 2 70 186 13 129 2.21e-13 68.6
MS.gene80858.t1 MTR_7g010210 33.051 118 77 2 70 186 13 129 2.80e-13 67.8
MS.gene80858.t1 MTR_1g076150 31.298 131 84 3 70 197 13 140 3.02e-13 67.4
MS.gene80858.t1 MTR_5g079220 39.362 94 53 3 74 165 26 117 3.43e-13 67.4
MS.gene80858.t1 MTR_4g082230 32.331 133 85 3 70 201 13 141 3.72e-13 68.2
MS.gene80858.t1 MTR_7g111290 44.444 63 34 1 104 166 6 67 4.09e-13 67.8
MS.gene80858.t1 MTR_0001s0360 36.170 94 58 2 74 166 12 104 4.21e-13 67.0
MS.gene80858.t1 MTR_7g011170 36.449 107 66 2 70 175 13 118 4.44e-13 67.4
MS.gene80858.t1 MTR_3g052430 34.286 105 65 3 70 172 42 144 6.21e-13 67.8
MS.gene80858.t1 MTR_6g090405 30.968 155 98 6 65 213 8 159 6.33e-13 66.2
MS.gene80858.t1 MTR_5g078930 38.947 95 54 3 74 166 14 106 7.19e-13 65.9
MS.gene80858.t1 MTR_6g027370 36.842 95 59 1 74 168 102 195 7.41e-13 67.0
MS.gene80858.t1 MTR_5g078800 38.298 94 54 3 74 165 12 103 1.51e-12 65.5
MS.gene80858.t1 MTR_0193s0090 37.815 119 67 4 65 178 3 119 1.69e-12 64.3
MS.gene80858.t1 MTR_0008s0280 31.858 113 75 2 74 185 17 128 1.95e-12 64.7
MS.gene80858.t1 MTR_0140s0030 31.933 119 79 2 70 187 14 131 2.15e-12 65.5
MS.gene80858.t1 MTR_0489s0020 31.933 119 79 2 70 187 14 131 2.15e-12 65.5
MS.gene80858.t1 MTR_3g011610 30.769 104 70 2 70 172 38 140 3.13e-12 65.5
MS.gene80858.t1 MTR_6g055910 29.851 134 85 4 68 198 11 138 3.94e-12 64.3
MS.gene80858.t1 MTR_2g067420 34.615 104 66 2 65 167 10 112 4.24e-12 64.7
MS.gene80858.t1 MTR_5g078860 37.234 94 55 3 74 165 12 103 4.26e-12 64.7
MS.gene80858.t1 MTR_8g060940 35.484 93 58 2 74 165 12 103 4.93e-12 63.9
MS.gene80858.t1 MTR_3g039990 33.913 115 74 2 70 183 14 127 6.64e-12 63.9
MS.gene80858.t1 MTR_6g055910 30.769 104 64 3 97 198 12 109 6.99e-12 63.5
MS.gene80858.t1 MTR_4g063100 36.364 88 49 3 88 175 4 84 9.84e-12 62.8
MS.gene80858.t1 MTR_5g016510 30.851 94 64 1 74 167 8 100 1.18e-11 63.5
MS.gene80858.t1 MTR_2g096380 42.254 71 38 2 97 165 14 83 1.45e-11 62.0
MS.gene80858.t1 MTR_4g097570 35.294 102 58 4 70 166 13 111 1.76e-11 62.8
MS.gene80858.t1 MTR_5g079120 33.028 109 69 3 60 166 52 158 1.96e-11 62.8
MS.gene80858.t1 MTR_0063s0090 28.455 123 81 4 70 188 13 132 2.07e-11 61.6
MS.gene80858.t1 MTR_1g017000 34.653 101 59 4 70 166 13 110 2.10e-11 62.0
MS.gene80858.t1 MTR_1g043080 34.737 95 56 3 74 165 17 108 2.82e-11 61.6
MS.gene80858.t1 MTR_1g083630 25.641 156 105 3 70 215 13 167 3.19e-11 62.8
MS.gene80858.t1 MTR_6g012690 33.333 120 75 3 70 188 13 128 3.72e-11 62.0
MS.gene80858.t1 MTR_4g057635 37.000 100 52 5 74 167 17 111 5.15e-11 61.6
MS.gene80858.t1 MTR_6g080360 30.435 92 62 1 74 165 482 571 7.46e-11 61.6
MS.gene80858.t1 MTR_4g097570 35.644 101 58 4 70 166 13 110 7.63e-11 60.8
MS.gene80858.t1 MTR_1g085880 38.393 112 64 2 62 170 5 114 7.66e-11 59.7
MS.gene80858.t1 MTR_2g095520 40.625 64 37 1 104 167 49 111 8.97e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80858.t1 AT4G18770 53.398 103 47 1 73 175 219 320 5.36e-34 126
MS.gene80858.t1 AT3G27785 45.631 103 55 1 73 175 191 292 7.56e-30 115
MS.gene80858.t1 AT5G58850 45.614 114 61 1 73 186 107 219 2.79e-29 113
MS.gene80858.t1 AT5G40360 45.217 115 58 2 73 183 160 273 1.48e-28 110
MS.gene80858.t1 AT5G11050 41.176 119 69 1 73 191 107 224 5.55e-27 107
MS.gene80858.t1 AT2G25230 42.727 110 61 2 72 180 27 135 9.82e-26 100
MS.gene80858.t1 AT5G40430 43.119 109 59 3 73 180 56 162 2.02e-24 97.8
MS.gene80858.t1 AT5G11510 41.489 94 54 1 74 167 84 176 4.27e-22 94.7
MS.gene80858.t1 AT5G11510 41.489 94 54 1 74 167 84 176 4.35e-22 94.7
MS.gene80858.t1 AT5G11510 41.489 94 54 1 74 167 84 176 4.35e-22 94.7
MS.gene80858.t1 AT5G11510 41.489 94 54 1 74 167 84 176 4.35e-22 94.7
MS.gene80858.t1 AT5G11510 41.489 94 54 1 74 167 84 176 4.43e-22 94.7
MS.gene80858.t1 AT3G09370 43.617 94 52 1 74 167 138 230 5.23e-21 91.3
MS.gene80858.t1 AT3G09370 43.617 94 52 1 74 167 133 225 5.48e-21 91.3
MS.gene80858.t1 AT3G09370 43.617 94 52 1 74 167 146 238 6.21e-21 90.9
MS.gene80858.t1 AT5G02320 42.553 94 53 1 74 167 130 222 1.37e-20 90.1
MS.gene80858.t1 AT5G02320 34.783 92 60 0 74 165 78 169 1.04e-13 70.1
MS.gene80858.t1 AT5G02320 42.553 94 53 1 74 167 130 222 1.37e-20 90.1
MS.gene80858.t1 AT5G02320 34.783 92 60 0 74 165 78 169 1.04e-13 70.1
MS.gene80858.t1 AT5G02320 42.553 94 53 1 74 167 70 162 1.46e-20 89.7
MS.gene80858.t1 AT5G02320 34.409 93 61 0 74 166 18 110 1.14e-13 69.7
MS.gene80858.t1 AT4G00540 44.330 97 50 2 74 167 106 201 2.40e-20 88.6
MS.gene80858.t1 AT4G00540 36.000 100 56 2 74 165 49 148 4.83e-13 67.8
MS.gene80858.t1 AT4G00540 44.330 97 50 2 74 167 104 199 3.65e-20 88.6
MS.gene80858.t1 AT4G00540 36.000 100 56 2 74 165 47 146 6.29e-13 67.4
MS.gene80858.t1 AT4G32730 39.362 94 56 1 74 167 90 182 7.33e-20 88.2
MS.gene80858.t1 AT4G32730 39.362 94 56 1 74 167 90 182 7.44e-20 88.2
MS.gene80858.t1 AT4G32730 39.362 94 56 1 74 167 90 182 7.44e-20 88.2
MS.gene80858.t1 AT4G32730 39.362 94 56 1 74 167 90 182 7.44e-20 88.2
MS.gene80858.t1 AT4G32730 39.362 94 56 1 74 167 90 182 7.44e-20 88.2
MS.gene80858.t1 AT2G02820 38.843 121 72 2 63 183 22 140 9.78e-20 86.3
MS.gene80858.t1 AT2G02820 38.843 121 72 2 63 183 22 140 9.79e-20 87.4
MS.gene80858.t1 AT2G02820 38.843 121 72 2 63 183 22 140 1.02e-19 87.4
MS.gene80858.t1 AT1G14350 40.171 117 68 2 63 179 17 131 2.00e-19 86.3
MS.gene80858.t1 AT1G14350 40.171 117 68 2 63 179 17 131 2.00e-19 86.3
MS.gene80858.t1 AT5G14750 39.815 108 61 3 62 167 9 114 1.78e-18 80.5
MS.gene80858.t1 AT3G28470 39.362 94 55 2 74 166 17 109 8.13e-18 80.9
MS.gene80858.t1 AT4G33450 36.842 114 71 1 74 187 22 134 1.06e-17 79.3
MS.gene80858.t1 AT3G13890 36.283 113 61 2 65 167 8 119 1.77e-17 80.5
MS.gene80858.t1 AT5G40330 40.566 106 59 3 63 166 6 109 1.77e-17 78.2
MS.gene80858.t1 AT3G55730 35.246 122 70 2 74 187 59 179 2.08e-17 80.5
MS.gene80858.t1 AT3G29020 37.895 95 58 1 74 168 68 161 6.10e-17 77.0
MS.gene80858.t1 AT1G17950 31.852 135 88 2 74 205 8 141 7.89e-17 77.0
MS.gene80858.t1 AT5G12870 37.963 108 55 4 74 175 23 124 1.18e-16 77.0
MS.gene80858.t1 AT3G29020 37.895 95 58 1 74 168 70 163 1.21e-16 77.4
MS.gene80858.t1 AT1G69560 37.895 95 58 1 74 168 110 203 1.30e-16 77.8
MS.gene80858.t1 AT1G69560 37.895 95 58 1 74 168 126 219 1.39e-16 77.8
MS.gene80858.t1 AT3G13890 36.538 104 64 2 65 167 8 110 1.46e-16 77.8
MS.gene80858.t1 AT4G28110 39.423 104 61 2 70 172 13 115 1.68e-16 76.6
MS.gene80858.t1 AT2G39880 35.652 115 71 2 62 174 39 152 1.80e-16 77.4
MS.gene80858.t1 AT3G27920 39.252 107 58 4 65 166 7 111 3.62e-16 75.1
MS.gene80858.t1 AT3G24310 41.935 93 52 2 74 165 23 114 4.40e-16 75.5
MS.gene80858.t1 AT1G09540 40.000 95 55 2 74 167 17 110 4.99e-16 76.3
MS.gene80858.t1 AT5G26660 38.947 95 56 2 74 167 17 110 6.41e-16 75.9
MS.gene80858.t1 AT3G08500 35.088 114 68 3 62 172 23 133 9.23e-16 75.5
MS.gene80858.t1 AT1G26780 36.842 95 59 1 74 168 101 194 1.09e-15 74.3
MS.gene80858.t1 AT4G13480 40.860 93 53 2 74 165 11 102 1.09e-15 74.3
MS.gene80858.t1 AT1G57560 31.410 156 94 5 74 221 17 167 1.15e-15 74.7
MS.gene80858.t1 AT3G12720 36.842 95 58 2 74 167 27 120 1.19e-15 74.7
MS.gene80858.t1 AT1G26780 36.842 95 59 1 74 168 101 194 1.34e-15 75.1
MS.gene80858.t1 AT4G01680 38.947 95 56 2 74 167 17 110 1.40e-15 74.7
MS.gene80858.t1 AT5G35550 35.897 117 73 2 74 189 19 134 1.48e-15 73.9
MS.gene80858.t1 AT1G57560 40.206 97 54 3 74 168 17 111 1.73e-15 73.9
MS.gene80858.t1 AT3G61250 37.000 100 57 3 70 166 13 109 1.76e-15 74.3
MS.gene80858.t1 AT4G01680 38.947 95 56 2 74 167 17 110 1.91e-15 73.2
MS.gene80858.t1 AT2G26950 38.235 102 58 4 73 172 20 118 2.05e-15 74.7
MS.gene80858.t1 AT3G27810 32.331 133 88 2 66 197 17 148 2.44e-15 72.8
MS.gene80858.t1 AT4G05100 36.449 107 66 2 70 175 14 119 2.78e-15 73.9
MS.gene80858.t1 AT5G17800 32.609 138 82 3 74 206 96 227 2.79e-15 73.9
MS.gene80858.t1 AT4G01680 37.383 107 53 3 74 167 17 122 2.99e-15 73.9
MS.gene80858.t1 AT3G09230 35.354 99 63 1 74 172 58 155 5.40e-15 73.6
MS.gene80858.t1 AT2G47190 37.624 101 61 2 66 165 17 116 5.50e-15 72.4
MS.gene80858.t1 AT3G30210 39.785 93 54 2 74 165 32 123 5.57e-15 72.4
MS.gene80858.t1 AT4G12350 39.362 94 55 2 74 166 17 109 7.10e-15 72.4
MS.gene80858.t1 AT1G73410 37.374 99 61 1 74 172 9 106 9.12e-15 71.2
MS.gene80858.t1 AT3G46130 36.634 101 62 2 66 165 6 105 1.05e-14 71.6
MS.gene80858.t1 AT1G73410 37.895 95 58 1 74 168 9 102 1.43e-14 70.1
MS.gene80858.t1 AT1G63910 35.577 104 65 2 65 167 8 110 1.44e-14 72.0
MS.gene80858.t1 AT4G21440 33.600 125 78 3 74 197 17 137 1.52e-14 72.0
MS.gene80858.t1 AT3G13540 38.000 100 56 3 70 166 24 120 1.62e-14 70.9
MS.gene80858.t1 AT4G22680 38.384 99 59 2 70 167 13 110 1.72e-14 70.9
MS.gene80858.t1 AT2G31180 35.000 120 70 4 70 184 13 129 1.96e-14 70.5
MS.gene80858.t1 AT3G48920 40.000 100 48 4 74 167 23 116 2.03e-14 70.9
MS.gene80858.t1 AT1G74430 36.190 105 65 2 74 177 17 120 3.14e-14 70.5
MS.gene80858.t1 AT5G56110 39.806 103 59 3 66 166 8 109 3.17e-14 70.9
MS.gene80858.t1 AT5G26660 45.312 64 34 1 104 167 17 79 3.48e-14 70.9
MS.gene80858.t1 AT4G09460 37.755 98 51 4 74 166 17 109 3.51e-14 69.7
MS.gene80858.t1 AT2G32460 28.667 150 95 5 70 216 7 147 3.63e-14 71.2
MS.gene80858.t1 AT2G32460 28.667 150 95 5 70 216 19 159 3.71e-14 71.2
MS.gene80858.t1 AT3G53200 34.906 106 65 3 74 177 14 117 4.28e-14 69.3
MS.gene80858.t1 AT5G35550 38.372 86 52 1 104 189 53 137 4.41e-14 69.7
MS.gene80858.t1 AT1G34670 35.922 103 64 2 65 166 8 109 5.44e-14 70.5
MS.gene80858.t1 AT5G65230 36.893 103 63 2 65 166 8 109 6.59e-14 69.7
MS.gene80858.t1 AT5G52600 37.736 106 61 3 66 167 6 110 6.91e-14 68.2
MS.gene80858.t1 AT5G59780 36.559 93 57 2 74 165 13 104 7.07e-14 68.9
MS.gene80858.t1 AT3G11440 32.710 107 69 3 70 174 42 147 7.09e-14 70.5
MS.gene80858.t1 AT5G40350 36.634 101 62 2 66 165 14 113 7.84e-14 68.2
MS.gene80858.t1 AT5G06100 33.858 127 66 5 62 174 16 138 7.84e-14 70.1
MS.gene80858.t1 AT5G06100 33.858 127 66 5 62 174 16 138 8.51e-14 70.1
MS.gene80858.t1 AT5G06100 33.858 127 66 5 62 174 16 138 8.51e-14 70.1
MS.gene80858.t1 AT5G06100 33.858 127 66 5 62 174 16 138 8.51e-14 70.1
MS.gene80858.t1 AT5G06100 33.858 127 66 5 62 174 16 138 8.51e-14 70.1
MS.gene80858.t1 AT1G68320 37.634 93 56 2 74 165 24 115 9.51e-14 69.3
MS.gene80858.t1 AT3G11440 32.710 107 69 3 70 174 42 147 1.00e-13 70.1
MS.gene80858.t1 AT3G11440 32.710 107 69 3 70 174 42 147 1.00e-13 70.1
MS.gene80858.t1 AT3G11440 32.710 107 69 3 70 174 42 147 1.00e-13 70.1
MS.gene80858.t1 AT5G10280 35.577 104 65 2 65 167 8 110 1.06e-13 69.3
MS.gene80858.t1 AT1G66380 41.053 95 52 3 74 166 13 105 1.06e-13 66.2
MS.gene80858.t1 AT5G54230 32.558 129 82 3 70 197 13 137 1.16e-13 69.3
MS.gene80858.t1 AT5G62470 31.579 133 87 2 70 202 13 141 1.19e-13 69.3
MS.gene80858.t1 AT1G22640 37.000 100 49 5 74 166 17 109 1.21e-13 68.6
MS.gene80858.t1 AT4G38620 36.735 98 52 4 74 166 17 109 1.35e-13 68.6
MS.gene80858.t1 AT3G60460 38.095 105 62 3 68 170 10 113 1.54e-13 68.6
MS.gene80858.t1 AT3G50060 30.275 109 75 1 74 182 9 116 1.94e-13 68.6
MS.gene80858.t1 AT1G06180 36.364 99 57 3 70 165 13 108 1.95e-13 67.8
MS.gene80858.t1 AT3G01530 36.364 110 66 4 74 180 30 138 2.09e-13 67.0
MS.gene80858.t1 AT1G48000 37.634 93 56 2 74 165 37 128 2.61e-13 67.4
MS.gene80858.t1 AT3G02940 34.615 104 66 2 65 167 8 110 2.80e-13 68.2
MS.gene80858.t1 AT5G16770 33.654 104 67 2 70 172 13 115 2.95e-13 68.2
MS.gene80858.t1 AT5G16770 33.654 104 67 2 70 172 13 115 2.95e-13 68.2
MS.gene80858.t1 AT1G66370 37.500 96 56 3 74 167 13 106 3.17e-13 67.0
MS.gene80858.t1 AT3G23250 36.364 99 57 3 70 165 13 108 3.46e-13 67.4
MS.gene80858.t1 AT1G35515 35.789 95 59 2 74 167 17 110 3.47e-13 66.6
MS.gene80858.t1 AT5G16770 33.028 109 71 2 65 172 8 115 3.80e-13 67.8
MS.gene80858.t1 AT5G16770 33.028 109 71 2 65 172 8 115 3.80e-13 67.8
MS.gene80858.t1 AT3G02940 34.615 104 66 2 65 167 8 110 3.89e-13 67.8
MS.gene80858.t1 AT3G02940 34.615 104 66 2 65 167 8 110 3.89e-13 67.8
MS.gene80858.t1 AT2G26960 33.645 107 67 3 63 166 12 117 3.90e-13 68.2
MS.gene80858.t1 AT2G16720 36.735 98 52 4 74 166 17 109 4.06e-13 67.0
MS.gene80858.t1 AT1G66230 38.384 99 51 4 74 167 17 110 4.57e-13 67.0
MS.gene80858.t1 AT5G14750 43.750 64 35 1 104 167 18 80 5.18e-13 65.1
MS.gene80858.t1 AT3G47600 36.735 98 60 2 70 166 13 109 7.56e-13 67.0
MS.gene80858.t1 AT5G14340 37.864 103 54 4 70 167 25 122 9.26e-13 66.2
MS.gene80858.t1 AT1G25340 35.354 99 59 2 67 165 16 109 9.41e-13 66.2
MS.gene80858.t1 AT5G49330 37.624 101 57 3 70 167 13 110 1.01e-12 66.6
MS.gene80858.t1 AT5G67300 32.979 94 62 1 74 167 9 101 1.43e-12 65.9
MS.gene80858.t1 AT1G25340 35.354 99 59 2 67 165 16 109 1.56e-12 65.9
MS.gene80858.t1 AT4G34990 34.737 95 60 2 74 167 17 110 1.74e-12 65.5
MS.gene80858.t1 AT1G25340 36.000 100 62 2 67 165 16 114 1.95e-12 65.5
MS.gene80858.t1 AT5G39700 34.737 95 61 1 74 168 59 152 2.21e-12 63.9
MS.gene80858.t1 AT5G62470 31.343 134 87 3 70 202 13 142 3.36e-12 65.1
MS.gene80858.t1 AT1G74080 36.735 98 60 2 70 166 13 109 3.53e-12 65.1
MS.gene80858.t1 AT3G27810 32.979 94 62 1 104 197 7 99 3.75e-12 63.2
MS.gene80858.t1 AT1G56160 34.906 106 63 3 70 172 15 117 3.88e-12 64.7
MS.gene80858.t1 AT1G18570 36.735 98 60 2 70 166 14 110 4.60e-12 64.7
MS.gene80858.t1 AT5G55020 34.343 99 61 3 70 166 27 123 4.92e-12 65.1
MS.gene80858.t1 AT1G08810 33.051 118 77 2 70 186 13 129 5.00e-12 64.3
MS.gene80858.t1 AT5G16600 36.893 103 55 4 70 167 13 110 5.76e-12 64.3
MS.gene80858.t1 AT4G37260 31.915 94 63 1 74 167 16 108 6.02e-12 64.3
MS.gene80858.t1 AT1G74650 36.000 100 62 2 68 166 11 109 7.01e-12 64.3
MS.gene80858.t1 AT3G53200 39.189 74 44 1 104 177 12 84 7.09e-12 62.8
MS.gene80858.t1 AT2G47460 36.634 101 58 3 70 167 13 110 7.99e-12 64.3
MS.gene80858.t1 AT1G79180 33.607 122 73 4 70 188 15 131 8.56e-12 63.5
MS.gene80858.t1 AT5G07690 37.755 98 59 2 70 166 13 109 1.02e-11 63.5
MS.gene80858.t1 AT2G23290 33.684 95 60 2 74 167 16 108 1.18e-11 63.5
MS.gene80858.t1 AT1G16490 32.632 95 63 1 104 198 50 143 1.22e-11 63.2
MS.gene80858.t1 AT4G26930 30.000 110 70 4 62 166 9 116 1.39e-11 63.5
MS.gene80858.t1 AT3G18100 35.870 92 58 1 74 165 498 588 2.44e-11 63.2
MS.gene80858.t1 AT3G18100 35.870 92 58 1 74 165 450 540 3.29e-11 62.8
MS.gene80858.t1 AT5G07700 37.755 98 59 2 70 166 13 109 3.40e-11 62.4
MS.gene80858.t1 AT5G07700 37.755 98 59 2 70 166 13 109 3.40e-11 62.4
MS.gene80858.t1 AT1G56650 37.234 94 57 2 74 166 13 105 3.46e-11 61.6
MS.gene80858.t1 AT3G18100 35.870 92 58 1 74 165 337 427 3.86e-11 62.4
MS.gene80858.t1 AT4G25560 31.818 110 73 2 74 182 15 123 3.94e-11 61.6
MS.gene80858.t1 AT3G18100 35.870 92 58 1 74 165 285 375 4.73e-11 62.4
MS.gene80858.t1 AT5G23000 34.545 110 55 4 70 170 13 114 6.05e-11 61.6
MS.gene80858.t1 AT1G66390 38.298 94 56 2 74 166 13 105 6.61e-11 60.8
MS.gene80858.t1 AT3G62610 34.343 99 63 2 70 167 13 110 7.19e-11 61.2
MS.gene80858.t1 AT1G18710 30.275 109 74 2 70 177 13 120 7.19e-11 60.8
MS.gene80858.t1 AT5G40350 41.935 62 35 1 104 165 8 68 7.84e-11 59.3
MS.gene80858.t1 AT5G61420 30.464 151 90 4 70 206 13 162 7.88e-11 61.2
MS.gene80858.t1 AT3G12820 40.278 72 42 1 104 175 2 72 8.07e-11 59.7

Find 42 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAAGGAATATCATGTAAA+TGG 0.158160 7.4:-69777273 MS.gene80858:CDS
AAGTCGTTTAGCAACCTTTA+AGG 0.177380 7.4:-69775512 None:intergenic
TAGCATTCTTCTGGAATCTA+TGG 0.225382 7.4:-69776978 MS.gene80858:CDS
CGTGTTCATTGAGTTGTTCT+TGG 0.251185 7.4:+69775649 None:intergenic
AAAATGTAGTTGAGAATAAT+TGG 0.251203 7.4:-69775754 MS.gene80858:CDS
TTGAGTTGTTCTTGGCATTC+CGG 0.325493 7.4:+69775657 None:intergenic
GAAATTGTTAAGAGATTTCC+AGG 0.336421 7.4:-69775728 MS.gene80858:CDS
TTAAGGAATATCATGTAAAT+GGG 0.361686 7.4:-69777272 MS.gene80858:CDS
AAGATAGGCACCTTAGTATC+TGG 0.405000 7.4:+69776860 None:intergenic
TCATCACTAATATTAACATT+TGG 0.410601 7.4:+69775608 None:intergenic
CATATTGCTACCTTTCTAGA+TGG 0.420484 7.4:-69776929 MS.gene80858:CDS
TTCAGAGTGTGATTATGAAA+TGG 0.434618 7.4:-69775582 MS.gene80858:CDS
GGAATGCCATTGAGCGTGTC+CGG 0.456600 7.4:-69775676 MS.gene80858:CDS
TTCAGTCTTGCCATCTAGAA+AGG 0.458563 7.4:+69776919 None:intergenic
AGCATTCTTCTGGAATCTAT+GGG 0.458629 7.4:-69776977 MS.gene80858:CDS
CAGAGAACAAATATGTCAAA+TGG 0.471361 7.4:-69777149 MS.gene80858:CDS
CACTAATATTAACATTTGGT+TGG 0.486948 7.4:+69775612 None:intergenic
AGAGTTCAGTTAAGAACCAT+TGG 0.497650 7.4:-69775697 MS.gene80858:CDS
AGATCGGGTACATGGAGAAT+AGG 0.502294 7.4:+69777202 None:intergenic
CAAGCTTGTAATAAGAGATC+GGG 0.505248 7.4:+69777187 None:intergenic
TGTCAAATGGACCGCGGAAG+AGG 0.506887 7.4:-69777136 MS.gene80858:CDS
GGCATTCCGGACACGCTCAA+TGG 0.510370 7.4:+69775670 None:intergenic
CTATCTTCGACCAGATACTA+AGG 0.518324 7.4:-69776870 MS.gene80858:intron
GCAAGCTTGTAATAAGAGAT+CGG 0.519747 7.4:+69777186 None:intergenic
GTACATGGAGAATAGGTTGT+TGG 0.521390 7.4:+69777209 None:intergenic
CATGGAGAATAGGTTGTTGG+AGG 0.533287 7.4:+69777212 None:intergenic
AATGGACCGCGGAAGAGGAT+AGG 0.542446 7.4:-69777131 MS.gene80858:intron
ACTGAACTCTCAGTACGGCC+TGG 0.548161 7.4:+69775710 None:intergenic
AAGAGTAGAACTTTCATGCA+AGG 0.551994 7.4:+69777341 None:intergenic
GTTGCTTTGAGCTTAAAGAA+TGG 0.554111 7.4:-69776955 MS.gene80858:CDS
GTAATAAGAGATCGGGTACA+TGG 0.559791 7.4:+69777194 None:intergenic
TAAGGAATATCATGTAAATG+GGG 0.578900 7.4:-69777271 MS.gene80858:CDS
AGAGTAGAACTTTCATGCAA+GGG 0.592633 7.4:+69777342 None:intergenic
CACGCTCAATGGCATTCCAA+TGG 0.603862 7.4:+69775681 None:intergenic
TTGTAGCGAAACTAGAGTGA+TGG 0.606093 7.4:+69777244 None:intergenic
AAGGTGGTGTAATGTGATGG+TGG 0.618036 7.4:+69777312 None:intergenic
TCTTAACTGAACTCTCAGTA+CGG 0.632743 7.4:+69775705 None:intergenic
GATATACCTATCCTCTTCCG+CGG 0.644396 7.4:+69777125 None:intergenic
CAAGAACAACTCAATGAACA+CGG 0.646667 7.4:-69775648 MS.gene80858:CDS
AACAAGGTGGTGTAATGTGA+TGG 0.651680 7.4:+69777309 None:intergenic
TATGCTTGCAGGATGAACCA+TGG 0.685451 7.4:-69775814 MS.gene80858:intron
CAAATATGTCAAATGGACCG+CGG 0.716250 7.4:-69777142 MS.gene80858:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATATAAATAACTAGA+AGG + chr7.4:69777019-69777038 None:intergenic 10.0%
!! TAAGTAAAAATAATTAAAGT+CGG + chr7.4:69776270-69776289 None:intergenic 10.0%
!! AAAAAATATATATAAACGTC+CGG - chr7.4:69776413-69776432 MS.gene80858:intron 15.0%
!! AATAACTATAGATAAAACTT+AGG + chr7.4:69776862-69776881 None:intergenic 15.0%
!! ATAACATCAAATTGATTAAA+TGG - chr7.4:69776158-69776177 MS.gene80858:intron 15.0%
!! GAATTAGGTTATAAAAATAA+GGG + chr7.4:69776081-69776100 None:intergenic 15.0%
!! TAAAAAAGAATTGAAAAGAT+AGG + chr7.4:69776020-69776039 None:intergenic 15.0%
!! TAACATCAAATTGATTAAAT+GGG - chr7.4:69776159-69776178 MS.gene80858:intron 15.0%
!!! AATCTTTATTTTTTTCAAGA+AGG + chr7.4:69776448-69776467 None:intergenic 15.0%
!!! AATGTTTTCATATTTTAGTA+TGG - chr7.4:69775796-69775815 MS.gene80858:CDS 15.0%
!!! GAATATATCATTTTTTTATG+TGG - chr7.4:69776354-69776373 MS.gene80858:intron 15.0%
!! AAAAATAACATATCTATCGT+AGG + chr7.4:69776808-69776827 None:intergenic 20.0%
!! AAAATGTAGTTGAGAATAAT+TGG - chr7.4:69777108-69777127 MS.gene80858:intron 20.0%
!! AAGATAAACGTTTCAATAAT+GGG - chr7.4:69776129-69776148 MS.gene80858:intron 20.0%
!! GGAATTAGGTTATAAAAATA+AGG + chr7.4:69776082-69776101 None:intergenic 20.0%
!! TCATCACTAATATTAACATT+TGG + chr7.4:69777257-69777276 None:intergenic 20.0%
!! TTAAGGAATATCATGTAAAT+GGG - chr7.4:69775590-69775609 MS.gene80858:CDS 20.0%
!! TTTAAGGAATATCATGTAAA+TGG - chr7.4:69775589-69775608 MS.gene80858:CDS 20.0%
!!! AAATTGATTTTGAGAAAACA+AGG + chr7.4:69775572-69775591 None:intergenic 20.0%
!!! ATAATTTTTTAGCATTCTTC+TGG - chr7.4:69775875-69775894 MS.gene80858:intron 20.0%
!!! CAAAGAGACTTTTAAAAAAA+CGG + chr7.4:69776598-69776617 None:intergenic 20.0%
!!! GGTTTTATTATATACACTAT+TGG - chr7.4:69775817-69775836 MS.gene80858:intron 20.0%
!!! GTTTTCTCAAAATCAATTTA+AGG - chr7.4:69775573-69775592 MS.gene80858:CDS 20.0%
!!! TTTTTATGTGGATTTTATGT+GGG - chr7.4:69776366-69776385 MS.gene80858:intron 20.0%
!!! TTTTTTATGTGGATTTTATG+TGG - chr7.4:69776365-69776384 MS.gene80858:intron 20.0%
! AGATAAACGTTTCAATAATG+GGG - chr7.4:69776130-69776149 MS.gene80858:intron 25.0%
! CACTAATATTAACATTTGGT+TGG + chr7.4:69777253-69777272 None:intergenic 25.0%
! GAAGATAAACGTTTCAATAA+TGG - chr7.4:69776128-69776147 MS.gene80858:intron 25.0%
! TAAGGAATATCATGTAAATG+GGG - chr7.4:69775591-69775610 MS.gene80858:CDS 25.0%
! TACTACATTAGCATTATTCA+AGG - chr7.4:69776390-69776409 MS.gene80858:intron 25.0%
! TATAATAGCCCAAATTCAAT+TGG - chr7.4:69776292-69776311 MS.gene80858:intron 25.0%
! TCTAATCTTCTTCTTAAATG+CGG - chr7.4:69776504-69776523 MS.gene80858:intron 25.0%
! TCTTTGAATTTAGCTAATGT+AGG - chr7.4:69776612-69776631 MS.gene80858:intron 25.0%
!! ATTCAATTTTCTATCGACAT+TGG - chr7.4:69776544-69776563 MS.gene80858:intron 25.0%
!!! TTCAATTTGCAGTTTTAGTT+GGG - chr7.4:69776235-69776254 MS.gene80858:intron 25.0%
AGCGTTCAAAATTAACAAGA+AGG + chr7.4:69776962-69776981 None:intergenic 30.0%
CAGAGAACAAATATGTCAAA+TGG - chr7.4:69775713-69775732 MS.gene80858:CDS 30.0%
CATATCTATCGTAGGATTTA+AGG + chr7.4:69776800-69776819 None:intergenic 30.0%
GAAATTGTTAAGAGATTTCC+AGG - chr7.4:69777134-69777153 MS.gene80858:CDS 30.0%
GGAACTATCCAATTGAATTT+GGG + chr7.4:69776303-69776322 None:intergenic 30.0%
GTACATATATGTTGCATCTT+AGG + chr7.4:69776840-69776859 None:intergenic 30.0%
TGGAACTATCCAATTGAATT+TGG + chr7.4:69776304-69776323 None:intergenic 30.0%
TTCAGAGTGTGATTATGAAA+TGG - chr7.4:69777280-69777299 MS.gene80858:CDS 30.0%
! TATTTCTTTTGTATGCTTGC+AGG - chr7.4:69777037-69777056 MS.gene80858:intron 30.0%
!! ACATGCAAAAGCATTATATG+TGG + chr7.4:69776048-69776067 None:intergenic 30.0%
!! CTTCAATTTGCAGTTTTAGT+TGG - chr7.4:69776234-69776253 MS.gene80858:intron 30.0%
!! TTGATTTTGAGAAAACAAGG+TGG + chr7.4:69775569-69775588 None:intergenic 30.0%
!!! GTTTCTTCTTTTTTACTCCA+TGG + chr7.4:69777068-69777087 None:intergenic 30.0%
AAGAGTAGAACTTTCATGCA+AGG + chr7.4:69775524-69775543 None:intergenic 35.0%
AGAGTAGAACTTTCATGCAA+GGG + chr7.4:69775523-69775542 None:intergenic 35.0%
AGAGTTCAGTTAAGAACCAT+TGG - chr7.4:69777165-69777184 MS.gene80858:CDS 35.0%
CAAGAACAACTCAATGAACA+CGG - chr7.4:69777214-69777233 MS.gene80858:CDS 35.0%
CAAGACTGAAAAACAATGCA+GGG - chr7.4:69775956-69775975 MS.gene80858:intron 35.0%
CAAGCTTGTAATAAGAGATC+GGG + chr7.4:69775678-69775697 None:intergenic 35.0%
CATATTGCTACCTTTCTAGA+TGG - chr7.4:69775933-69775952 MS.gene80858:intron 35.0%
GAGAGGACAAAATTGGAATT+AGG + chr7.4:69776096-69776115 None:intergenic 35.0%
GCAAGCTTGTAATAAGAGAT+CGG + chr7.4:69775679-69775698 None:intergenic 35.0%
GGATAGTTCCAAATCAAACA+GGG - chr7.4:69776313-69776332 MS.gene80858:intron 35.0%
GTAACTTTCCCTGTTTGATT+TGG + chr7.4:69776324-69776343 None:intergenic 35.0%
TCTTAACTGAACTCTCAGTA+CGG + chr7.4:69777160-69777179 None:intergenic 35.0%
TGGATAGTTCCAAATCAAAC+AGG - chr7.4:69776312-69776331 MS.gene80858:intron 35.0%
! GTTGCTTTGAGCTTAAAGAA+TGG - chr7.4:69775907-69775926 MS.gene80858:intron 35.0%
! TTCAAGAAGGCATAACATTC+CGG + chr7.4:69776435-69776454 None:intergenic 35.0%
!! AGCATTCTTCTGGAATCTAT+GGG - chr7.4:69775885-69775904 MS.gene80858:intron 35.0%
!! TAGCATTCTTCTGGAATCTA+TGG - chr7.4:69775884-69775903 MS.gene80858:intron 35.0%
!!! TGAAATGGAGTTTTTTCCTG+AGG - chr7.4:69777295-69777314 MS.gene80858:CDS 35.0%
AAAAACAATGCAGGGAGAGA+TGG - chr7.4:69775964-69775983 MS.gene80858:intron 40.0%
AACAAGGTGGTGTAATGTGA+TGG + chr7.4:69775556-69775575 None:intergenic 40.0%
AAGATAGGCACCTTAGTATC+TGG + chr7.4:69776005-69776024 None:intergenic 40.0%
ATATTAGCACATAAGACCCG+TGG - chr7.4:69776737-69776756 MS.gene80858:intron 40.0%
CAAATATGTCAAATGGACCG+CGG - chr7.4:69775720-69775739 MS.gene80858:CDS 40.0%
CTATCTTCGACCAGATACTA+AGG - chr7.4:69775992-69776011 MS.gene80858:intron 40.0%
GCAAGACTGAAAAACAATGC+AGG - chr7.4:69775955-69775974 MS.gene80858:intron 40.0%
GTAATAAGAGATCGGGTACA+TGG + chr7.4:69775671-69775690 None:intergenic 40.0%
GTACATGGAGAATAGGTTGT+TGG + chr7.4:69775656-69775675 None:intergenic 40.0%
TATTAGCACATAAGACCCGT+GGG - chr7.4:69776738-69776757 MS.gene80858:intron 40.0%
TCTTCATTCTTGTGAGTGAG+AGG + chr7.4:69776113-69776132 None:intergenic 40.0%
TGTGAGTGAGAGGACAAAAT+TGG + chr7.4:69776103-69776122 None:intergenic 40.0%
TTCAGTCTTGCCATCTAGAA+AGG + chr7.4:69775946-69775965 None:intergenic 40.0%
TTGAACGCTTGAATCACACA+CGG - chr7.4:69776973-69776992 MS.gene80858:CDS 40.0%
TTGTAGCGAAACTAGAGTGA+TGG + chr7.4:69775621-69775640 None:intergenic 40.0%
! CGTGTTCATTGAGTTGTTCT+TGG + chr7.4:69777216-69777235 None:intergenic 40.0%
! TTGAGTTGTTCTTGGCATTC+CGG + chr7.4:69777208-69777227 None:intergenic 40.0%
AAGGTGGTGTAATGTGATGG+TGG + chr7.4:69775553-69775572 None:intergenic 45.0%
AGATCGGGTACATGGAGAAT+AGG + chr7.4:69775663-69775682 None:intergenic 45.0%
CATGGAGAATAGGTTGTTGG+AGG + chr7.4:69775653-69775672 None:intergenic 45.0%
GATATACCTATCCTCTTCCG+CGG + chr7.4:69775740-69775759 None:intergenic 45.0%
TATGCTTGCAGGATGAACCA+TGG - chr7.4:69777048-69777067 MS.gene80858:intron 45.0%
TCCTGCTGCATAAAAACCTC+AGG + chr7.4:69777314-69777333 None:intergenic 45.0%
TGCATACCTTCGATGTACAG+TGG - chr7.4:69776480-69776499 MS.gene80858:intron 45.0%
TTAGAGCCACTGTACATCGA+AGG + chr7.4:69776489-69776508 None:intergenic 45.0%
! TCCTGAGGTTTTTATGCAGC+AGG - chr7.4:69777310-69777329 MS.gene80858:CDS 45.0%
AAAACTAGACTGCCGACCCA+CGG + chr7.4:69776757-69776776 None:intergenic 50.0%
CACGCTCAATGGCATTCCAA+TGG + chr7.4:69777184-69777203 None:intergenic 50.0%
AAACTAGACTGCCGACCCAC+GGG + chr7.4:69776756-69776775 None:intergenic 55.0%
AATGGACCGCGGAAGAGGAT+AGG - chr7.4:69775731-69775750 MS.gene80858:CDS 55.0%
ACTGAACTCTCAGTACGGCC+TGG + chr7.4:69777155-69777174 None:intergenic 55.0%
AGCACATAAGACCCGTGGGT+CGG - chr7.4:69776742-69776761 MS.gene80858:intron 55.0%
GGAATGCCATTGAGCGTGTC+CGG - chr7.4:69777186-69777205 MS.gene80858:CDS 55.0%
TGTCAAATGGACCGCGGAAG+AGG - chr7.4:69775726-69775745 MS.gene80858:CDS 55.0%
GGCATTCCGGACACGCTCAA+TGG + chr7.4:69777195-69777214 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 69775514 69777370 69775514 ID=MS.gene80858
chr7.4 mRNA 69775514 69777370 69775514 ID=MS.gene80858.t1;Parent=MS.gene80858
chr7.4 exon 69777132 69777370 69777132 ID=MS.gene80858.t1.exon1;Parent=MS.gene80858.t1
chr7.4 CDS 69777132 69777370 69777132 ID=cds.MS.gene80858.t1;Parent=MS.gene80858.t1
chr7.4 exon 69776871 69776997 69776871 ID=MS.gene80858.t1.exon2;Parent=MS.gene80858.t1
chr7.4 CDS 69776871 69776997 69776871 ID=cds.MS.gene80858.t1;Parent=MS.gene80858.t1
chr7.4 exon 69775514 69775825 69775514 ID=MS.gene80858.t1.exon3;Parent=MS.gene80858.t1
chr7.4 CDS 69775514 69775825 69775514 ID=cds.MS.gene80858.t1;Parent=MS.gene80858.t1
Gene Sequence

>MS.gene80858

ATGGTTCCCTTGCATGAAAGTTCTACTCTTTCAACTCCACCATCACATTACACCACCTTGTTTTCTCAAAATCAATTTAAGGAATATCATGTAAATGGGGTTAACCATCACTCTAGTTTCGCTACAACGATTTCTTCCTCCAACAACCTATTCTCCATGTACCCGATCTCTTATTACAAGCTTGCAGACGACAATGAATCAGAGAACAAATATGTCAAATGGACCGCGGAAGAGGATAGGTATATCAAATCATTTAAAATTCGAACTCTCTCTCTACTACACAATGTTTTCATATTTTAGTATGGTTTTATTATATACACTATTGGTTCAAGTTCAAGATATGTTTAATTATTTTGTTTTTATAATTTTTTAGCATTCTTCTGGAATCTATGGGTTGCTTTGAGCTTAAAGAATGGTCACATATTGCTACCTTTCTAGATGGCAAGACTGAAAAACAATGCAGGGAGAGATGGTATAACTATCTTCGACCAGATACTAAGGTGCCTATCTTTTCAATTCTTTTTTACTACTCCACATATAATGCTTTTGCATGTACATATTTTACCCTTATTTTTATAACCTAATTCCAATTTTGTCCTCTCACTCACAAGAATGAAGATAAACGTTTCAATAATGGGGAGACAATAACATCAAATTGATTAAATGGGTATATTCAATTGTTTAAGAATGAAATATTAGTATTAAAAATAAAACATTTTACTTCAATTTGCAGTTTTAGTTGGGAATACGCTTCCGACTTTAATTATTTTTACTTATATATAATAGCCCAAATTCAATTGGATAGTTCCAAATCAAACAGGGAAAGTTACGCTTATATTTGAATATATCATTTTTTTATGTGGATTTTATGTGGGCTACTACATTAGCATTATTCAAGGAAAAAATATATATAAACGTCCGGAATGTTATGCCTTCTTGAAAAAAATAAAGATTGTGATGTCTGAATGCATACCTTCGATGTACAGTGGCTCTAATCTTCTTCTTAAATGCGGTGACATGATCATTCTTCATTCAATTTTCTATCGACATTGGTCTATAGTATGTGAGTTTGAATCTTATTCCGTTTTTTTAAAAGTCTCTTTGAATTTAGCTAATGTAGGTAATGCATATTTTTTAATGTTTATATATTTTCGAAGAAATATTTATTTATTATTTTTTTAATGTTTATATATTTTCGAAGAAATATTTATTTATTATAACATATATTAGCACATAAGACCCGTGGGTCGGCAGTCTAGTTTTCTCACGAAATTTTAAAAATACCTTAAATCCTACGATAGATATGTTATTTTTAGTAGAGAACCTAAGATGCAACATATATGTACCTAAGTTTTATCTATAGTTATTTCAGTGAATCATTTTATTGTTTAGTATATAGCACTGACATAAATTTTATTTATTTATTTATTTTTATAAAAATGTATCCTTCTTGTTAATTTTGAACGCTTGAATCACACACGGATGCTATGTTTTAGTAGACTCCTTCTAGTTATTTATATATTTATTTCTTTTGTATGCTTGCAGGATGAACCATGGAGTAAAAAAGAAGAAACTATACTACTTGAACTTCAGAAAAATGTAGTTGAGAATAATTGGACTGAAATTGTTAAGAGATTTCCAGGCCGTACTGAGAGTTCAGTTAAGAACCATTGGAATGCCATTGAGCGTGTCCGGAATGCCAAGAACAACTCAATGAACACGGCTAATGTTGAAAACCAACCAAATGTTAATATTAGTGATGAAAGTTCAGAGTGTGATTATGAAATGGAGTTTTTTCCTGAGGTTTTTATGCAGCAGGAAATTGATTTCATGAAGAAGTCGTTTAGCAACCTTTAA
Protein sequence

>MS.gene80858.t1

MVPLHESSTLSTPPSHYTTLFSQNQFKEYHVNGVNHHSSFATTISSSNNLFSMYPISYYKLADDNESENKYVKWTAEEDSILLESMGCFELKEWSHIATFLDGKTEKQCRERWYNYLRPDTKDEPWSKKEETILLELQKNVVENNWTEIVKRFPGRTESSVKNHWNAIERVRNAKNNSMNTANVENQPNVNISDESSECDYEMEFFPEVFMQQEIDFMKKSFSNL