Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81070.t1 | XP_013444514.1 | 87.4 | 406 | 44 | 3 | 1 | 405 | 1 | 400 | 1.30E-199 | 705.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81070.t1 | F4JN35 | 58.9 | 158 | 56 | 4 | 10 | 161 | 9 | 163 | 4.8e-46 | 186.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81070.t1 | G7ZZI3 | 87.4 | 406 | 44 | 3 | 1 | 405 | 1 | 400 | 9.1e-200 | 705.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene81070.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81070.t1 | MTR_8g023840 | 87.438 | 406 | 44 | 3 | 1 | 405 | 1 | 400 | 0.0 | 711 |
MS.gene81070.t1 | MTR_8g023860 | 63.470 | 438 | 106 | 8 | 1 | 403 | 1 | 419 | 0.0 | 512 |
MS.gene81070.t1 | MTR_8g023930 | 66.786 | 280 | 89 | 3 | 8 | 285 | 22 | 299 | 2.09e-127 | 376 |
MS.gene81070.t1 | MTR_8g023900 | 63.481 | 293 | 99 | 3 | 1 | 291 | 184 | 470 | 4.89e-126 | 372 |
MS.gene81070.t1 | MTR_8g023900 | 68.649 | 185 | 54 | 3 | 1 | 181 | 1 | 185 | 8.25e-84 | 264 |
MS.gene81070.t1 | MTR_8g023880 | 43.110 | 283 | 122 | 9 | 10 | 278 | 7 | 264 | 1.79e-57 | 189 |
MS.gene81070.t1 | MTR_3g093040 | 54.651 | 172 | 65 | 6 | 10 | 175 | 108 | 272 | 1.21e-53 | 181 |
MS.gene81070.t1 | MTR_5g069030 | 57.233 | 159 | 59 | 4 | 8 | 160 | 23 | 178 | 1.34e-51 | 183 |
MS.gene81070.t1 | MTR_3g093050 | 55.556 | 162 | 63 | 5 | 8 | 163 | 20 | 178 | 7.02e-51 | 180 |
MS.gene81070.t1 | MTR_3g093050 | 55.556 | 162 | 63 | 5 | 8 | 163 | 20 | 178 | 1.60e-50 | 180 |
MS.gene81070.t1 | MTR_2g086880 | 36.688 | 308 | 165 | 11 | 13 | 305 | 21 | 313 | 1.04e-45 | 165 |
MS.gene81070.t1 | MTR_2g086880 | 36.688 | 308 | 165 | 11 | 13 | 305 | 21 | 313 | 1.98e-45 | 165 |
MS.gene81070.t1 | MTR_6g477900 | 52.597 | 154 | 64 | 5 | 10 | 157 | 6 | 156 | 1.33e-44 | 155 |
MS.gene81070.t1 | MTR_2g064090 | 48.795 | 166 | 72 | 5 | 10 | 165 | 6 | 168 | 1.16e-43 | 155 |
MS.gene81070.t1 | MTR_5g014300 | 49.398 | 166 | 71 | 5 | 10 | 165 | 6 | 168 | 8.58e-43 | 153 |
MS.gene81070.t1 | MTR_5g076850 | 51.613 | 155 | 66 | 4 | 10 | 158 | 6 | 157 | 1.78e-42 | 158 |
MS.gene81070.t1 | MTR_3g064580 | 46.154 | 182 | 88 | 5 | 10 | 184 | 6 | 184 | 4.20e-42 | 157 |
MS.gene81070.t1 | MTR_1g090723 | 51.656 | 151 | 66 | 3 | 13 | 158 | 11 | 159 | 5.94e-41 | 153 |
MS.gene81070.t1 | MTR_1g090723 | 51.656 | 151 | 66 | 3 | 13 | 158 | 11 | 159 | 9.39e-41 | 153 |
MS.gene81070.t1 | MTR_7g085220 | 42.708 | 192 | 81 | 7 | 6 | 175 | 4 | 188 | 1.04e-40 | 147 |
MS.gene81070.t1 | MTR_2g080010 | 39.056 | 233 | 126 | 8 | 10 | 237 | 15 | 236 | 1.88e-40 | 147 |
MS.gene81070.t1 | MTR_1g090723 | 50.658 | 152 | 67 | 3 | 13 | 158 | 11 | 160 | 6.18e-40 | 150 |
MS.gene81070.t1 | MTR_4g098630 | 46.154 | 182 | 86 | 6 | 10 | 183 | 6 | 183 | 8.14e-40 | 144 |
MS.gene81070.t1 | MTR_4g089135 | 48.276 | 145 | 71 | 3 | 6 | 149 | 11 | 152 | 5.45e-39 | 143 |
MS.gene81070.t1 | MTR_3g096140 | 47.682 | 151 | 70 | 5 | 13 | 157 | 10 | 157 | 1.81e-38 | 140 |
MS.gene81070.t1 | MTR_3g096920 | 48.750 | 160 | 67 | 6 | 10 | 160 | 7 | 160 | 2.88e-38 | 140 |
MS.gene81070.t1 | MTR_2157s0010 | 46.061 | 165 | 70 | 6 | 10 | 158 | 8 | 169 | 8.92e-38 | 137 |
MS.gene81070.t1 | MTR_3g109340 | 49.020 | 153 | 71 | 5 | 10 | 158 | 22 | 171 | 8.98e-38 | 140 |
MS.gene81070.t1 | MTR_3g096140 | 47.682 | 151 | 70 | 5 | 13 | 157 | 10 | 157 | 1.34e-37 | 139 |
MS.gene81070.t1 | MTR_5g012080 | 43.429 | 175 | 89 | 6 | 3 | 171 | 2 | 172 | 1.52e-37 | 139 |
MS.gene81070.t1 | MTR_4g036030 | 47.205 | 161 | 73 | 7 | 3 | 157 | 2 | 156 | 2.49e-37 | 139 |
MS.gene81070.t1 | MTR_0036s0150 | 49.677 | 155 | 71 | 3 | 9 | 158 | 4 | 156 | 3.73e-37 | 142 |
MS.gene81070.t1 | MTR_3g088110 | 46.497 | 157 | 69 | 5 | 10 | 157 | 7 | 157 | 7.11e-37 | 136 |
MS.gene81070.t1 | MTR_8g094580 | 44.848 | 165 | 67 | 6 | 10 | 160 | 7 | 161 | 8.85e-37 | 135 |
MS.gene81070.t1 | MTR_7g005280 | 43.636 | 165 | 83 | 4 | 10 | 170 | 15 | 173 | 1.06e-36 | 134 |
MS.gene81070.t1 | MTR_2g079990 | 46.835 | 158 | 65 | 6 | 10 | 157 | 16 | 164 | 1.07e-36 | 137 |
MS.gene81070.t1 | MTR_3g109340 | 49.351 | 154 | 70 | 6 | 10 | 158 | 22 | 172 | 1.17e-36 | 137 |
MS.gene81070.t1 | MTR_4g081870 | 45.679 | 162 | 65 | 6 | 10 | 157 | 9 | 161 | 3.76e-36 | 133 |
MS.gene81070.t1 | MTR_4g035590 | 48.026 | 152 | 72 | 5 | 10 | 157 | 8 | 156 | 6.19e-36 | 135 |
MS.gene81070.t1 | MTR_2g078700 | 53.846 | 130 | 56 | 3 | 9 | 137 | 22 | 148 | 6.50e-36 | 135 |
MS.gene81070.t1 | MTR_6g084430 | 45.963 | 161 | 76 | 6 | 10 | 164 | 5 | 160 | 7.98e-36 | 134 |
MS.gene81070.t1 | MTR_4g101680 | 45.000 | 160 | 78 | 6 | 3 | 157 | 2 | 156 | 1.11e-35 | 134 |
MS.gene81070.t1 | MTR_3g096920 | 51.852 | 135 | 58 | 4 | 10 | 143 | 7 | 135 | 1.20e-35 | 134 |
MS.gene81070.t1 | MTR_8g063550 | 43.046 | 151 | 77 | 4 | 13 | 157 | 9 | 156 | 2.72e-35 | 133 |
MS.gene81070.t1 | MTR_8g099750 | 43.590 | 156 | 72 | 4 | 10 | 154 | 14 | 164 | 2.75e-35 | 130 |
MS.gene81070.t1 | MTR_1g090720 | 48.408 | 157 | 66 | 4 | 13 | 157 | 45 | 198 | 3.73e-35 | 135 |
MS.gene81070.t1 | MTR_8g059170 | 44.311 | 167 | 72 | 6 | 10 | 164 | 14 | 171 | 3.82e-35 | 132 |
MS.gene81070.t1 | MTR_8g063550 | 43.046 | 151 | 77 | 4 | 13 | 157 | 9 | 156 | 6.73e-35 | 134 |
MS.gene81070.t1 | MTR_1g008740 | 44.805 | 154 | 78 | 3 | 10 | 158 | 13 | 164 | 1.03e-34 | 131 |
MS.gene81070.t1 | MTR_3g070030 | 45.810 | 179 | 80 | 8 | 11 | 177 | 20 | 193 | 1.17e-34 | 131 |
MS.gene81070.t1 | MTR_1g008740 | 44.805 | 154 | 78 | 3 | 10 | 158 | 27 | 178 | 1.29e-34 | 132 |
MS.gene81070.t1 | MTR_8g076110 | 42.169 | 166 | 85 | 6 | 10 | 167 | 6 | 168 | 1.36e-34 | 130 |
MS.gene81070.t1 | MTR_3g435150 | 46.497 | 157 | 71 | 6 | 10 | 158 | 16 | 167 | 1.43e-34 | 130 |
MS.gene81070.t1 | MTR_2g093810 | 43.210 | 162 | 71 | 5 | 11 | 158 | 15 | 169 | 1.81e-34 | 130 |
MS.gene81070.t1 | MTR_2g062730 | 39.801 | 201 | 103 | 8 | 10 | 195 | 10 | 207 | 3.02e-34 | 130 |
MS.gene81070.t1 | MTR_8g063550 | 43.046 | 151 | 77 | 4 | 13 | 157 | 9 | 156 | 3.13e-34 | 132 |
MS.gene81070.t1 | MTR_4g108760 | 45.399 | 163 | 74 | 7 | 10 | 162 | 17 | 174 | 4.89e-34 | 130 |
MS.gene81070.t1 | MTR_5g021710 | 45.455 | 154 | 74 | 6 | 10 | 157 | 8 | 157 | 5.46e-34 | 130 |
MS.gene81070.t1 | MTR_1g069805 | 39.487 | 195 | 96 | 7 | 10 | 202 | 10 | 184 | 5.82e-34 | 127 |
MS.gene81070.t1 | MTR_4g134460 | 44.937 | 158 | 75 | 6 | 7 | 158 | 51 | 202 | 7.85e-34 | 131 |
MS.gene81070.t1 | MTR_2g079990 | 50.388 | 129 | 58 | 4 | 10 | 137 | 16 | 139 | 8.99e-34 | 130 |
MS.gene81070.t1 | MTR_8g467490 | 41.250 | 160 | 76 | 4 | 13 | 157 | 17 | 173 | 9.07e-34 | 130 |
MS.gene81070.t1 | MTR_5g041940 | 42.442 | 172 | 76 | 7 | 10 | 167 | 3 | 165 | 1.86e-33 | 126 |
MS.gene81070.t1 | MTR_7g100990 | 40.244 | 164 | 83 | 6 | 6 | 157 | 5 | 165 | 2.05e-33 | 127 |
MS.gene81070.t1 | MTR_1g096430 | 35.470 | 234 | 133 | 10 | 10 | 235 | 7 | 230 | 2.33e-33 | 127 |
MS.gene81070.t1 | MTR_7g097090 | 44.218 | 147 | 77 | 4 | 10 | 154 | 10 | 153 | 3.62e-33 | 126 |
MS.gene81070.t1 | MTR_1g097300 | 51.034 | 145 | 62 | 5 | 13 | 156 | 22 | 158 | 8.77e-33 | 130 |
MS.gene81070.t1 | MTR_3g116070 | 47.794 | 136 | 66 | 3 | 10 | 142 | 23 | 156 | 1.01e-32 | 126 |
MS.gene81070.t1 | MTR_2g064470 | 43.226 | 155 | 74 | 5 | 10 | 157 | 11 | 158 | 1.27e-32 | 125 |
MS.gene81070.t1 | MTR_4g052620 | 42.581 | 155 | 77 | 4 | 11 | 154 | 6 | 159 | 3.44e-32 | 122 |
MS.gene81070.t1 | MTR_7g011130 | 54.331 | 127 | 52 | 5 | 12 | 137 | 21 | 142 | 4.11e-32 | 124 |
MS.gene81070.t1 | MTR_6g012670 | 46.405 | 153 | 70 | 5 | 10 | 161 | 20 | 161 | 5.38e-32 | 124 |
MS.gene81070.t1 | MTR_8g093580 | 41.722 | 151 | 79 | 4 | 13 | 157 | 9 | 156 | 6.40e-32 | 126 |
MS.gene81070.t1 | MTR_5g040420 | 39.375 | 160 | 80 | 4 | 13 | 158 | 17 | 173 | 1.21e-31 | 124 |
MS.gene81070.t1 | MTR_7g085260 | 48.092 | 131 | 62 | 4 | 10 | 137 | 17 | 144 | 1.66e-31 | 124 |
MS.gene81070.t1 | MTR_6g011860 | 40.994 | 161 | 76 | 5 | 13 | 158 | 18 | 174 | 2.32e-31 | 123 |
MS.gene81070.t1 | MTR_8g024480 | 40.642 | 187 | 89 | 7 | 10 | 180 | 15 | 195 | 2.52e-31 | 124 |
MS.gene81070.t1 | MTR_4g075980 | 43.243 | 148 | 79 | 4 | 13 | 158 | 18 | 162 | 6.26e-31 | 120 |
MS.gene81070.t1 | MTR_7g011120 | 53.543 | 127 | 53 | 5 | 12 | 137 | 10 | 131 | 9.42e-31 | 120 |
MS.gene81070.t1 | MTR_6g032770 | 46.565 | 131 | 64 | 4 | 10 | 138 | 18 | 144 | 9.85e-31 | 121 |
MS.gene81070.t1 | MTR_3g096140 | 44.928 | 138 | 67 | 5 | 26 | 157 | 2 | 136 | 1.88e-30 | 120 |
MS.gene81070.t1 | MTR_2g068920 | 39.286 | 168 | 80 | 6 | 10 | 157 | 20 | 185 | 3.28e-30 | 118 |
MS.gene81070.t1 | MTR_2g068880 | 38.202 | 178 | 88 | 6 | 10 | 167 | 21 | 196 | 3.38e-30 | 118 |
MS.gene81070.t1 | MTR_2g086690 | 42.308 | 156 | 77 | 5 | 11 | 154 | 5 | 159 | 6.35e-30 | 116 |
MS.gene81070.t1 | MTR_3g098810 | 37.500 | 168 | 86 | 5 | 10 | 163 | 14 | 176 | 1.02e-28 | 112 |
MS.gene81070.t1 | MTR_3g098810 | 41.912 | 136 | 71 | 4 | 10 | 142 | 14 | 144 | 3.46e-28 | 109 |
MS.gene81070.t1 | MTR_5g090970 | 45.669 | 127 | 64 | 4 | 13 | 137 | 21 | 144 | 2.74e-27 | 110 |
MS.gene81070.t1 | MTR_5g090970 | 44.882 | 127 | 64 | 4 | 13 | 137 | 21 | 143 | 8.69e-27 | 109 |
MS.gene81070.t1 | MTR_3g070040 | 51.181 | 127 | 53 | 6 | 12 | 137 | 10 | 128 | 1.42e-26 | 109 |
MS.gene81070.t1 | MTR_7g105170 | 35.976 | 164 | 90 | 5 | 10 | 159 | 4 | 166 | 4.50e-24 | 100 |
MS.gene81070.t1 | MTR_8g094580 | 44.860 | 107 | 38 | 4 | 68 | 160 | 8 | 107 | 4.61e-21 | 91.7 |
MS.gene81070.t1 | MTR_8g093790 | 33.939 | 165 | 88 | 6 | 10 | 173 | 10 | 154 | 6.37e-19 | 84.3 |
MS.gene81070.t1 | MTR_4g094302 | 29.545 | 176 | 97 | 6 | 10 | 171 | 11 | 173 | 8.21e-18 | 81.3 |
MS.gene81070.t1 | MTR_4g094302 | 35.115 | 131 | 69 | 5 | 10 | 137 | 11 | 128 | 3.75e-17 | 78.6 |
MS.gene81070.t1 | MTR_7g070140 | 42.857 | 84 | 46 | 2 | 56 | 137 | 6 | 89 | 1.58e-16 | 76.3 |
MS.gene81070.t1 | MTR_3g096400 | 32.919 | 161 | 83 | 6 | 10 | 154 | 7 | 158 | 1.78e-15 | 75.1 |
MS.gene81070.t1 | MTR_7g083330 | 28.743 | 167 | 110 | 5 | 10 | 172 | 18 | 179 | 3.75e-14 | 71.2 |
MS.gene81070.t1 | MTR_7g083360 | 33.077 | 130 | 79 | 5 | 10 | 137 | 10 | 133 | 7.01e-12 | 63.5 |
MS.gene81070.t1 | MTR_1g087190 | 54.000 | 50 | 23 | 0 | 9 | 58 | 4 | 53 | 5.81e-11 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81070.t1 | AT4G35580 | 58.491 | 159 | 57 | 4 | 10 | 162 | 9 | 164 | 2.06e-55 | 191 |
MS.gene81070.t1 | AT4G35580 | 58.491 | 159 | 57 | 4 | 10 | 162 | 9 | 164 | 2.31e-55 | 191 |
MS.gene81070.t1 | AT4G35580 | 58.491 | 159 | 57 | 4 | 10 | 162 | 9 | 164 | 2.41e-55 | 191 |
MS.gene81070.t1 | AT1G33060 | 57.143 | 154 | 57 | 4 | 10 | 157 | 24 | 174 | 1.95e-51 | 182 |
MS.gene81070.t1 | AT1G33060 | 57.143 | 154 | 57 | 4 | 10 | 157 | 24 | 174 | 2.09e-51 | 182 |
MS.gene81070.t1 | AT3G49530 | 53.086 | 162 | 68 | 4 | 10 | 165 | 13 | 172 | 8.00e-51 | 176 |
MS.gene81070.t1 | AT4G01550 | 50.000 | 174 | 82 | 3 | 12 | 183 | 6 | 176 | 2.26e-50 | 176 |
MS.gene81070.t1 | AT3G49530 | 53.086 | 162 | 68 | 4 | 10 | 165 | 13 | 172 | 3.06e-50 | 176 |
MS.gene81070.t1 | AT5G24590 | 53.205 | 156 | 65 | 4 | 10 | 159 | 13 | 166 | 7.57e-49 | 172 |
MS.gene81070.t1 | AT3G17730 | 49.102 | 167 | 76 | 4 | 10 | 170 | 6 | 169 | 1.78e-45 | 157 |
MS.gene81070.t1 | AT5G17260 | 52.532 | 158 | 59 | 5 | 10 | 157 | 6 | 157 | 2.90e-45 | 163 |
MS.gene81070.t1 | AT4G17980 | 48.734 | 158 | 72 | 3 | 10 | 159 | 6 | 162 | 1.16e-44 | 155 |
MS.gene81070.t1 | AT4G17980 | 48.734 | 158 | 72 | 3 | 10 | 159 | 6 | 162 | 2.99e-44 | 155 |
MS.gene81070.t1 | AT3G03200 | 52.532 | 158 | 59 | 5 | 10 | 157 | 6 | 157 | 3.22e-44 | 160 |
MS.gene81070.t1 | AT4G01520 | 38.532 | 218 | 120 | 6 | 11 | 216 | 5 | 220 | 2.58e-43 | 153 |
MS.gene81070.t1 | AT4G01540 | 38.710 | 217 | 119 | 6 | 12 | 216 | 6 | 220 | 3.90e-42 | 152 |
MS.gene81070.t1 | AT1G65910 | 51.220 | 164 | 69 | 5 | 10 | 165 | 6 | 166 | 5.45e-42 | 156 |
MS.gene81070.t1 | AT4G01540 | 39.286 | 224 | 108 | 8 | 12 | 216 | 6 | 220 | 8.63e-42 | 152 |
MS.gene81070.t1 | AT4G01540 | 38.710 | 217 | 119 | 6 | 12 | 216 | 6 | 220 | 9.40e-42 | 152 |
MS.gene81070.t1 | AT4G01540 | 39.286 | 224 | 108 | 8 | 12 | 216 | 6 | 220 | 1.60e-41 | 152 |
MS.gene81070.t1 | AT5G46590 | 47.305 | 167 | 79 | 4 | 10 | 169 | 6 | 170 | 2.01e-41 | 148 |
MS.gene81070.t1 | AT3G10480 | 50.000 | 152 | 66 | 4 | 13 | 157 | 30 | 178 | 4.08e-41 | 151 |
MS.gene81070.t1 | AT3G10490 | 49.342 | 152 | 67 | 4 | 13 | 157 | 30 | 178 | 9.43e-41 | 145 |
MS.gene81070.t1 | AT3G10480 | 49.669 | 151 | 67 | 4 | 13 | 157 | 30 | 177 | 2.19e-40 | 149 |
MS.gene81070.t1 | AT1G02230 | 47.059 | 153 | 76 | 4 | 11 | 160 | 4 | 154 | 3.39e-40 | 147 |
MS.gene81070.t1 | AT3G10490 | 49.342 | 152 | 67 | 4 | 13 | 157 | 30 | 178 | 9.25e-40 | 147 |
MS.gene81070.t1 | AT3G04070 | 38.326 | 227 | 108 | 8 | 1 | 209 | 1 | 213 | 1.25e-38 | 142 |
MS.gene81070.t1 | AT3G15500 | 43.605 | 172 | 78 | 6 | 10 | 171 | 14 | 176 | 3.68e-38 | 140 |
MS.gene81070.t1 | AT1G54330 | 50.331 | 151 | 69 | 4 | 10 | 157 | 6 | 153 | 6.09e-38 | 139 |
MS.gene81070.t1 | AT1G52890 | 44.318 | 176 | 79 | 6 | 10 | 175 | 14 | 180 | 6.32e-38 | 139 |
MS.gene81070.t1 | AT1G12260 | 45.963 | 161 | 75 | 7 | 3 | 157 | 2 | 156 | 7.02e-38 | 140 |
MS.gene81070.t1 | AT5G09330 | 50.331 | 151 | 66 | 4 | 13 | 157 | 9 | 156 | 8.82e-38 | 143 |
MS.gene81070.t1 | AT5G09330 | 50.331 | 151 | 66 | 4 | 13 | 157 | 9 | 156 | 8.82e-38 | 143 |
MS.gene81070.t1 | AT5G09330 | 50.331 | 151 | 66 | 4 | 13 | 157 | 9 | 156 | 8.82e-38 | 143 |
MS.gene81070.t1 | AT5G09330 | 50.331 | 151 | 66 | 4 | 13 | 157 | 9 | 156 | 8.82e-38 | 143 |
MS.gene81070.t1 | AT5G09330 | 50.331 | 151 | 66 | 4 | 13 | 157 | 9 | 156 | 8.82e-38 | 143 |
MS.gene81070.t1 | AT5G08790 | 46.541 | 159 | 68 | 6 | 10 | 157 | 7 | 159 | 9.78e-38 | 138 |
MS.gene81070.t1 | AT5G46590 | 50.725 | 138 | 65 | 3 | 10 | 146 | 6 | 141 | 1.37e-37 | 137 |
MS.gene81070.t1 | AT1G01720 | 45.570 | 158 | 70 | 5 | 10 | 157 | 7 | 158 | 1.48e-37 | 138 |
MS.gene81070.t1 | AT1G12260 | 45.963 | 161 | 75 | 7 | 3 | 157 | 2 | 156 | 1.87e-37 | 140 |
MS.gene81070.t1 | AT2G27300 | 40.513 | 195 | 106 | 6 | 13 | 203 | 17 | 205 | 2.06e-37 | 139 |
MS.gene81070.t1 | AT4G27410 | 46.203 | 158 | 66 | 6 | 10 | 157 | 14 | 162 | 2.09e-37 | 137 |
MS.gene81070.t1 | AT3G04070 | 48.936 | 141 | 65 | 4 | 1 | 137 | 1 | 138 | 5.74e-37 | 138 |
MS.gene81070.t1 | AT3G10500 | 51.316 | 152 | 65 | 5 | 13 | 158 | 12 | 160 | 7.82e-37 | 141 |
MS.gene81070.t1 | AT5G66300 | 46.753 | 154 | 73 | 5 | 10 | 157 | 12 | 162 | 7.94e-37 | 136 |
MS.gene81070.t1 | AT3G15510 | 40.196 | 204 | 92 | 7 | 14 | 190 | 21 | 221 | 1.05e-36 | 137 |
MS.gene81070.t1 | AT5G04410 | 50.000 | 152 | 67 | 4 | 13 | 158 | 12 | 160 | 1.11e-36 | 141 |
MS.gene81070.t1 | AT5G53950 | 54.198 | 131 | 56 | 3 | 8 | 137 | 15 | 142 | 1.71e-36 | 137 |
MS.gene81070.t1 | AT3G44290 | 46.250 | 160 | 73 | 7 | 1 | 159 | 11 | 158 | 1.74e-36 | 133 |
MS.gene81070.t1 | AT1G32510 | 44.512 | 164 | 78 | 4 | 8 | 159 | 4 | 166 | 1.75e-36 | 135 |
MS.gene81070.t1 | AT1G62700 | 41.935 | 186 | 95 | 7 | 3 | 183 | 2 | 179 | 1.94e-36 | 137 |
MS.gene81070.t1 | AT1G62700 | 41.935 | 186 | 95 | 7 | 3 | 183 | 2 | 179 | 1.94e-36 | 137 |
MS.gene81070.t1 | AT3G18400 | 40.201 | 199 | 106 | 6 | 10 | 200 | 5 | 198 | 2.05e-36 | 135 |
MS.gene81070.t1 | AT2G24430 | 47.097 | 155 | 74 | 4 | 10 | 159 | 16 | 167 | 3.08e-36 | 135 |
MS.gene81070.t1 | AT2G24430 | 47.097 | 155 | 74 | 4 | 10 | 159 | 16 | 167 | 3.08e-36 | 135 |
MS.gene81070.t1 | AT5G39610 | 45.455 | 165 | 77 | 6 | 7 | 163 | 17 | 176 | 4.87e-36 | 134 |
MS.gene81070.t1 | AT1G02250 | 44.805 | 154 | 80 | 4 | 11 | 161 | 4 | 155 | 9.04e-36 | 135 |
MS.gene81070.t1 | AT3G04060 | 34.859 | 284 | 142 | 12 | 10 | 264 | 20 | 289 | 1.57e-35 | 134 |
MS.gene81070.t1 | AT1G69490 | 45.570 | 158 | 71 | 7 | 10 | 157 | 9 | 161 | 1.61e-35 | 132 |
MS.gene81070.t1 | AT5G63790 | 35.662 | 272 | 147 | 9 | 10 | 269 | 50 | 305 | 1.82e-35 | 133 |
MS.gene81070.t1 | AT1G61110 | 44.379 | 169 | 72 | 6 | 7 | 157 | 13 | 177 | 1.90e-35 | 133 |
MS.gene81070.t1 | AT5G63790 | 35.662 | 272 | 147 | 9 | 10 | 269 | 60 | 315 | 2.04e-35 | 133 |
MS.gene81070.t1 | AT5G64060 | 46.753 | 154 | 67 | 5 | 13 | 157 | 9 | 156 | 2.92e-35 | 133 |
MS.gene81070.t1 | AT5G62380 | 45.161 | 155 | 75 | 6 | 9 | 157 | 6 | 156 | 3.29e-35 | 133 |
MS.gene81070.t1 | AT5G62380 | 45.161 | 155 | 75 | 6 | 9 | 157 | 6 | 156 | 3.29e-35 | 133 |
MS.gene81070.t1 | AT3G44290 | 46.250 | 160 | 73 | 7 | 1 | 159 | 11 | 158 | 3.54e-35 | 132 |
MS.gene81070.t1 | AT5G61430 | 46.497 | 157 | 71 | 7 | 10 | 158 | 16 | 167 | 4.97e-35 | 132 |
MS.gene81070.t1 | AT5G22290 | 47.333 | 150 | 69 | 7 | 13 | 159 | 24 | 166 | 5.39e-35 | 132 |
MS.gene81070.t1 | AT1G71930 | 44.444 | 153 | 77 | 5 | 10 | 157 | 9 | 158 | 6.40e-35 | 132 |
MS.gene81070.t1 | AT1G71930 | 44.444 | 153 | 77 | 5 | 10 | 157 | 9 | 158 | 6.40e-35 | 132 |
MS.gene81070.t1 | AT3G29035 | 52.713 | 129 | 55 | 5 | 10 | 137 | 24 | 147 | 6.77e-35 | 131 |
MS.gene81070.t1 | AT4G27410 | 42.775 | 173 | 67 | 7 | 10 | 157 | 14 | 179 | 1.29e-34 | 130 |
MS.gene81070.t1 | AT5G04395 | 42.405 | 158 | 77 | 4 | 1 | 145 | 19 | 175 | 1.54e-34 | 127 |
MS.gene81070.t1 | AT3G10480 | 41.622 | 185 | 65 | 6 | 13 | 157 | 30 | 211 | 1.82e-34 | 134 |
MS.gene81070.t1 | AT4G10350 | 46.452 | 155 | 73 | 5 | 10 | 157 | 9 | 160 | 1.82e-34 | 130 |
MS.gene81070.t1 | AT2G17040 | 45.946 | 148 | 75 | 4 | 13 | 158 | 9 | 153 | 1.96e-34 | 129 |
MS.gene81070.t1 | AT1G33280 | 46.711 | 152 | 74 | 5 | 10 | 157 | 8 | 156 | 2.15e-34 | 130 |
MS.gene81070.t1 | AT3G15170 | 51.163 | 129 | 59 | 3 | 10 | 137 | 20 | 145 | 2.17e-34 | 130 |
MS.gene81070.t1 | AT5G07680 | 46.154 | 156 | 71 | 6 | 10 | 157 | 3 | 153 | 3.25e-34 | 129 |
MS.gene81070.t1 | AT5G07680 | 52.713 | 129 | 55 | 5 | 10 | 137 | 17 | 140 | 3.31e-34 | 130 |
MS.gene81070.t1 | AT1G34190 | 47.742 | 155 | 66 | 5 | 13 | 158 | 19 | 167 | 3.75e-34 | 134 |
MS.gene81070.t1 | AT2G33480 | 48.052 | 154 | 64 | 6 | 10 | 157 | 15 | 158 | 5.13e-34 | 127 |
MS.gene81070.t1 | AT5G39820 | 46.715 | 137 | 69 | 3 | 13 | 148 | 23 | 156 | 5.80e-34 | 129 |
MS.gene81070.t1 | AT1G76420 | 44.156 | 154 | 76 | 5 | 10 | 157 | 22 | 171 | 6.43e-34 | 129 |
MS.gene81070.t1 | AT2G18060 | 42.135 | 178 | 89 | 7 | 10 | 177 | 9 | 182 | 6.53e-34 | 130 |
MS.gene81070.t1 | AT2G18060 | 42.135 | 178 | 89 | 7 | 10 | 177 | 9 | 182 | 6.53e-34 | 130 |
MS.gene81070.t1 | AT2G33480 | 46.753 | 154 | 68 | 5 | 10 | 157 | 15 | 160 | 7.11e-34 | 127 |
MS.gene81070.t1 | AT2G02450 | 40.782 | 179 | 88 | 6 | 13 | 187 | 54 | 218 | 8.67e-34 | 130 |
MS.gene81070.t1 | AT2G02450 | 40.331 | 181 | 90 | 6 | 13 | 189 | 54 | 220 | 1.53e-33 | 130 |
MS.gene81070.t1 | AT1G26870 | 38.000 | 200 | 92 | 6 | 13 | 183 | 19 | 215 | 2.64e-33 | 129 |
MS.gene81070.t1 | AT1G77450 | 35.417 | 240 | 118 | 10 | 11 | 235 | 11 | 228 | 2.67e-33 | 125 |
MS.gene81070.t1 | AT1G34180 | 52.381 | 126 | 56 | 3 | 13 | 137 | 19 | 141 | 3.28e-33 | 129 |
MS.gene81070.t1 | AT4G36160 | 44.156 | 154 | 76 | 6 | 10 | 157 | 10 | 159 | 3.79e-33 | 128 |
MS.gene81070.t1 | AT4G36160 | 44.156 | 154 | 76 | 6 | 10 | 157 | 10 | 159 | 3.79e-33 | 128 |
MS.gene81070.t1 | AT4G36160 | 44.156 | 154 | 76 | 6 | 10 | 157 | 14 | 163 | 4.27e-33 | 128 |
MS.gene81070.t1 | AT1G56010 | 37.129 | 202 | 96 | 5 | 10 | 184 | 19 | 216 | 6.75e-33 | 126 |
MS.gene81070.t1 | AT1G34180 | 42.268 | 194 | 90 | 8 | 13 | 195 | 19 | 201 | 6.91e-33 | 130 |
MS.gene81070.t1 | AT5G13180 | 42.484 | 153 | 77 | 4 | 10 | 157 | 14 | 160 | 7.46e-33 | 124 |
MS.gene81070.t1 | AT2G43000 | 37.949 | 195 | 102 | 8 | 13 | 193 | 21 | 210 | 7.82e-32 | 122 |
MS.gene81070.t1 | AT5G18270 | 50.388 | 129 | 59 | 4 | 10 | 137 | 21 | 145 | 9.37e-32 | 123 |
MS.gene81070.t1 | AT3G12910 | 40.361 | 166 | 76 | 5 | 13 | 158 | 24 | 186 | 9.56e-32 | 122 |
MS.gene81070.t1 | AT1G01010 | 44.231 | 156 | 77 | 4 | 12 | 159 | 5 | 158 | 1.33e-31 | 125 |
MS.gene81070.t1 | AT1G79580 | 44.516 | 155 | 74 | 6 | 10 | 157 | 17 | 166 | 1.57e-31 | 123 |
MS.gene81070.t1 | AT1G79580 | 44.516 | 155 | 74 | 6 | 10 | 157 | 17 | 166 | 1.57e-31 | 123 |
MS.gene81070.t1 | AT1G79580 | 44.516 | 155 | 74 | 6 | 10 | 157 | 17 | 166 | 1.57e-31 | 123 |
MS.gene81070.t1 | AT1G79580 | 44.516 | 155 | 74 | 6 | 10 | 157 | 17 | 166 | 1.57e-31 | 123 |
MS.gene81070.t1 | AT1G79580 | 44.516 | 155 | 74 | 6 | 10 | 157 | 17 | 166 | 1.57e-31 | 123 |
MS.gene81070.t1 | AT5G18270 | 49.612 | 129 | 60 | 4 | 10 | 137 | 21 | 145 | 2.27e-31 | 122 |
MS.gene81070.t1 | AT2G46770 | 34.052 | 232 | 118 | 9 | 10 | 213 | 16 | 240 | 1.21e-30 | 121 |
MS.gene81070.t1 | AT3G61910 | 34.956 | 226 | 116 | 9 | 10 | 214 | 11 | 226 | 2.74e-30 | 119 |
MS.gene81070.t1 | AT3G04420 | 41.722 | 151 | 84 | 3 | 11 | 159 | 4 | 152 | 3.47e-30 | 118 |
MS.gene81070.t1 | AT3G04420 | 41.722 | 151 | 84 | 4 | 11 | 159 | 4 | 152 | 4.69e-30 | 119 |
MS.gene81070.t1 | AT1G34180 | 47.826 | 138 | 56 | 4 | 13 | 137 | 19 | 153 | 5.98e-30 | 120 |
MS.gene81070.t1 | AT1G52880 | 46.012 | 163 | 63 | 6 | 14 | 157 | 21 | 177 | 6.94e-30 | 118 |
MS.gene81070.t1 | AT1G34180 | 39.806 | 206 | 90 | 9 | 13 | 195 | 19 | 213 | 9.99e-30 | 121 |
MS.gene81070.t1 | AT4G28530 | 39.157 | 166 | 82 | 4 | 10 | 158 | 10 | 173 | 2.02e-29 | 117 |
MS.gene81070.t1 | AT1G32770 | 41.566 | 166 | 75 | 7 | 10 | 157 | 16 | 177 | 2.11e-29 | 117 |
MS.gene81070.t1 | AT3G12977 | 37.433 | 187 | 91 | 7 | 10 | 182 | 18 | 192 | 5.74e-29 | 114 |
MS.gene81070.t1 | AT5G22380 | 41.026 | 156 | 80 | 5 | 10 | 154 | 5 | 159 | 1.18e-28 | 112 |
MS.gene81070.t1 | AT1G02220 | 41.781 | 146 | 80 | 4 | 11 | 155 | 4 | 145 | 4.83e-28 | 114 |
MS.gene81070.t1 | AT1G32870 | 45.455 | 154 | 71 | 6 | 13 | 158 | 13 | 161 | 6.89e-26 | 109 |
MS.gene81070.t1 | AT1G32870 | 45.455 | 154 | 71 | 6 | 13 | 158 | 13 | 161 | 7.05e-26 | 109 |
MS.gene81070.t1 | AT1G32870 | 45.455 | 154 | 71 | 6 | 13 | 158 | 49 | 197 | 1.03e-25 | 109 |
MS.gene81070.t1 | AT3G44350 | 37.821 | 156 | 87 | 4 | 12 | 158 | 7 | 161 | 1.87e-25 | 103 |
MS.gene81070.t1 | AT3G44350 | 40.909 | 132 | 74 | 3 | 12 | 140 | 7 | 137 | 9.12e-25 | 99.8 |
MS.gene81070.t1 | AT3G04430 | 40.441 | 136 | 65 | 5 | 16 | 139 | 6 | 137 | 3.21e-20 | 88.6 |
MS.gene81070.t1 | AT4G28530 | 43.119 | 109 | 45 | 2 | 10 | 103 | 10 | 116 | 6.01e-19 | 87.4 |
MS.gene81070.t1 | AT4G10350 | 42.857 | 105 | 52 | 3 | 59 | 157 | 11 | 113 | 1.57e-18 | 85.9 |
MS.gene81070.t1 | AT5G64530 | 36.923 | 130 | 64 | 5 | 10 | 137 | 3 | 116 | 2.02e-18 | 82.4 |
MS.gene81070.t1 | AT5G61430 | 43.396 | 106 | 50 | 5 | 61 | 158 | 1 | 104 | 2.93e-18 | 84.7 |
MS.gene81070.t1 | AT5G64530 | 36.923 | 130 | 64 | 5 | 10 | 137 | 3 | 116 | 6.10e-18 | 81.6 |
MS.gene81070.t1 | AT1G56010 | 35.417 | 144 | 64 | 4 | 68 | 184 | 8 | 149 | 6.70e-18 | 83.2 |
MS.gene81070.t1 | AT3G12977 | 33.939 | 165 | 82 | 7 | 68 | 210 | 20 | 179 | 7.66e-18 | 82.4 |
MS.gene81070.t1 | AT2G33480 | 44.898 | 98 | 46 | 3 | 66 | 157 | 8 | 103 | 2.43e-17 | 80.5 |
MS.gene81070.t1 | AT3G56530 | 35.333 | 150 | 87 | 7 | 11 | 154 | 53 | 198 | 4.12e-14 | 73.2 |
MS.gene81070.t1 | AT2G43000 | 35.338 | 133 | 70 | 6 | 75 | 193 | 2 | 132 | 2.15e-13 | 68.9 |
MS.gene81070.t1 | AT3G55210 | 32.298 | 161 | 88 | 9 | 10 | 154 | 11 | 166 | 3.10e-12 | 67.0 |
Find 67 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCATTTCGAGATGATTTC+GGG | 0.227385 | 8.4:-71242828 | MS.gene81070:CDS |
AGAGGTACTGAAAATGTTAT+TGG | 0.269464 | 8.4:-71243837 | MS.gene81070:CDS |
ACAAATACGCAAATAGTAAA+AGG | 0.269504 | 8.4:-71243923 | MS.gene81070:CDS |
GCATCATTTCGAGATGATTT+CGG | 0.275502 | 8.4:-71242829 | MS.gene81070:CDS |
TGGTCTTGACCGTAAGATTA+AGG | 0.284539 | 8.4:-71243862 | MS.gene81070:CDS |
GAATATGGAACCAATGTTTC+AGG | 0.286511 | 8.4:-71243368 | MS.gene81070:CDS |
TTTACAGTGTGGCAATGTTC+TGG | 0.292487 | 8.4:-71242899 | MS.gene81070:intron |
GCAGAGTTCGTTTGAAACTA+TGG | 0.297255 | 8.4:-71243218 | MS.gene81070:CDS |
CTCCTGGTGTTAATAGCAAC+TGG | 0.300575 | 8.4:-71243779 | MS.gene81070:CDS |
TACTATAATGGTTGTGCTCC+TGG | 0.345726 | 8.4:-71243795 | MS.gene81070:CDS |
AAAACACTTGTGTACTATAA+TGG | 0.357000 | 8.4:-71243807 | MS.gene81070:CDS |
GACATGGTGGTGGTTGGTCT+TGG | 0.361614 | 8.4:+71242691 | None:intergenic |
CATATCAATGTGTCCACTTT+CGG | 0.371587 | 8.4:+71243240 | None:intergenic |
TCGTTGAGAATGATTTACTA+TGG | 0.400930 | 8.4:-71243079 | MS.gene81070:CDS |
CTTGTTGAACATCCTAGTTC+AGG | 0.403607 | 8.4:-71242862 | MS.gene81070:CDS |
GAGGTACTGAAAATGTTATT+GGG | 0.407217 | 8.4:-71243836 | MS.gene81070:CDS |
TACCTTGCCAGAAAAGAATA+TGG | 0.417346 | 8.4:-71243383 | MS.gene81070:CDS |
GAAGGACACAGTGTGGATAC+TGG | 0.428296 | 8.4:-71243893 | MS.gene81070:CDS |
TGATGAGGTTCCTGAAACAT+TGG | 0.441580 | 8.4:+71243358 | None:intergenic |
GACCGTAAGATTAAGGTTAG+AGG | 0.442904 | 8.4:-71243855 | MS.gene81070:CDS |
TGGTTGGTCTTGGATGATAC+TGG | 0.447272 | 8.4:+71242701 | None:intergenic |
TGTTTGCAAGTTCGAACCTT+GGG | 0.454947 | 8.4:-71244091 | MS.gene81070:CDS |
AATGTTTCAGGAACCTCATC+AGG | 0.459890 | 8.4:-71243356 | MS.gene81070:CDS |
CTCGGACTGGACAGGAAAGC+TGG | 0.467178 | 8.4:+71243102 | None:intergenic |
TTGTTTCTTCTTAGAGTGGA+AGG | 0.468867 | 8.4:+71242727 | None:intergenic |
TCATTCTCAACGACTCGGAC+TGG | 0.469733 | 8.4:+71243089 | None:intergenic |
CCTCATAACTATGTTCCTGT+TGG | 0.475870 | 8.4:-71244216 | MS.gene81070:CDS |
GCATAGTATTCGCCTGAACT+AGG | 0.492328 | 8.4:+71242850 | None:intergenic |
TTCGTTTGAAACTATGGAAG+AGG | 0.492535 | 8.4:-71243212 | MS.gene81070:CDS |
TTTACAAGCTCTTCATCTGT+TGG | 0.494683 | 8.4:+71244180 | None:intergenic |
GGACGGAATCTGAATCCAAC+AGG | 0.495067 | 8.4:+71244201 | None:intergenic |
TACCTCTAACCTTAATCTTA+CGG | 0.495515 | 8.4:+71243853 | None:intergenic |
GAAAATCATGAAACAGTTGA+AGG | 0.499163 | 8.4:-71243509 | MS.gene81070:CDS |
TCGGAACTCATGTGTCTACT+TGG | 0.499283 | 8.4:+71243536 | None:intergenic |
TTCAATCTCTGAAAATGAGA+TGG | 0.499943 | 8.4:-71243296 | MS.gene81070:CDS |
GACTGGTATGTCGACGAGAA+AGG | 0.509371 | 8.4:+71243319 | None:intergenic |
CCAACAGGAACATAGTTATG+AGG | 0.518146 | 8.4:+71244216 | None:intergenic |
TTCGAACCTTGGGACTTACC+AGG | 0.522061 | 8.4:-71244081 | MS.gene81070:intron |
TAATTGTTTCAGGTAATAAG+TGG | 0.529271 | 8.4:-71243406 | MS.gene81070:intron |
ATCAATTCAATGTTAAATGA+CGG | 0.532646 | 8.4:-71243178 | MS.gene81070:CDS |
GATAGAATGATATGTGATGA+AGG | 0.532647 | 8.4:-71243563 | MS.gene81070:CDS |
GAAGTATCTTTATCGAACTC+AGG | 0.533769 | 8.4:-71243274 | MS.gene81070:CDS |
TGCTGAATTAGTCTCTATGC+CGG | 0.535468 | 8.4:-71243041 | MS.gene81070:intron |
GTTATTGTTTCTTCTTAGAG+TGG | 0.539752 | 8.4:+71242723 | None:intergenic |
CTCAACGACTCGGACTGGAC+AGG | 0.555897 | 8.4:+71243094 | None:intergenic |
CAAGCTCTTCATCTGTTGGA+CGG | 0.560584 | 8.4:+71244184 | None:intergenic |
CAATGTTCTGGATACTTCAA+CGG | 0.563840 | 8.4:-71242887 | MS.gene81070:CDS |
ACAAACCTGGTTATCATCAA+AGG | 0.564326 | 8.4:+71243731 | None:intergenic |
TACCACCTTTGATGATAACC+AGG | 0.567592 | 8.4:-71243736 | MS.gene81070:intron |
ATGTTTGCAAGTTCGAACCT+TGG | 0.568862 | 8.4:-71244092 | MS.gene81070:CDS |
ATAGTAAAAGGTTTAACAGA+AGG | 0.579914 | 8.4:-71243911 | MS.gene81070:CDS |
TCCTGGTGTTAATAGCAACT+GGG | 0.584943 | 8.4:-71243778 | MS.gene81070:CDS |
ATAGAATGATATGTGATGAA+GGG | 0.590150 | 8.4:-71243562 | MS.gene81070:CDS |
TGTGGATACTGGAAAGCCAC+TGG | 0.602459 | 8.4:-71243882 | MS.gene81070:CDS |
AGCTATAACATTGTTGACAG+TGG | 0.605859 | 8.4:+71244122 | None:intergenic |
TTGCAATTGATCATCTCTAG+AGG | 0.607895 | 8.4:+71242766 | None:intergenic |
ATGATTTACTATGGAAGCAG+TGG | 0.614801 | 8.4:-71243070 | MS.gene81070:CDS |
AATCTTACGGTCAAGACCAG+TGG | 0.626820 | 8.4:+71243866 | None:intergenic |
ACCCAGTTGCTATTAACACC+AGG | 0.638889 | 8.4:+71243777 | None:intergenic |
TAAAATCCGATGATCCCGAA+TGG | 0.649145 | 8.4:-71243968 | MS.gene81070:CDS |
ATCATTTCGAGATGATTTCG+GGG | 0.650121 | 8.4:-71242827 | MS.gene81070:CDS |
GTAAATCATTCTCAACGACT+CGG | 0.660341 | 8.4:+71243084 | None:intergenic |
AACCTGGTTATCATCAAAGG+TGG | 0.663139 | 8.4:+71243734 | None:intergenic |
TAGAATGATATGTGATGAAG+GGG | 0.664187 | 8.4:-71243561 | MS.gene81070:CDS |
TCATTTCGAGATGATTTCGG+GGG | 0.671935 | 8.4:-71242826 | MS.gene81070:CDS |
TTTGCGTATTTGTAATCACG+AGG | 0.676971 | 8.4:+71243933 | None:intergenic |
TTTAACAGAAGGACACAGTG+TGG | 0.694289 | 8.4:-71243900 | MS.gene81070:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATGAGAAAATAATGAT+GGG | + | chr8.4:71242851-71242870 | None:intergenic | 15.0% |
!!! | TTTTTATGAGAAAATAATGA+TGG | + | chr8.4:71242852-71242871 | None:intergenic | 15.0% |
!! | ATACACACTTTAATATCATT+TGG | + | chr8.4:71243894-71243913 | None:intergenic | 20.0% |
!! | ATCAATTCAATGTTAAATGA+CGG | - | chr8.4:71243710-71243729 | MS.gene81070:intron | 20.0% |
!! | TTTATGAGAAAATAATGATG+GGG | + | chr8.4:71242850-71242869 | None:intergenic | 20.0% |
! | AAAACACTTGTGTACTATAA+TGG | - | chr8.4:71243081-71243100 | MS.gene81070:CDS | 25.0% |
! | ACAAATACGCAAATAGTAAA+AGG | - | chr8.4:71242965-71242984 | MS.gene81070:intron | 25.0% |
! | ATAGAATGATATGTGATGAA+GGG | - | chr8.4:71243326-71243345 | MS.gene81070:CDS | 25.0% |
! | ATAGTAAAAGGTTTAACAGA+AGG | - | chr8.4:71242977-71242996 | MS.gene81070:intron | 25.0% |
! | GTTTACACTTTATGAGTATA+TGG | - | chr8.4:71243194-71243213 | MS.gene81070:CDS | 25.0% |
! | TATCTCAAAAACAAGTTACT+TGG | - | chr8.4:71242735-71242754 | MS.gene81070:CDS | 25.0% |
! | TTATGAGAAAATAATGATGG+GGG | + | chr8.4:71242849-71242868 | None:intergenic | 25.0% |
!! | ACTTGTTTGTTAATTGTTTC+AGG | - | chr8.4:71243472-71243491 | MS.gene81070:intron | 25.0% |
!! | TAATTGTTTCAGGTAATAAG+TGG | - | chr8.4:71243482-71243501 | MS.gene81070:intron | 25.0% |
!! | TTCTTCTAAATTTTACAGTG+TGG | - | chr8.4:71243978-71243997 | MS.gene81070:CDS | 25.0% |
!! | TTTTGAGCAGAAATATTTAC+CGG | + | chr8.4:71243869-71243888 | None:intergenic | 25.0% |
!!! | AAAAGTCCTCTAGAAAATTT+TGG | + | chr8.4:71243254-71243273 | None:intergenic | 25.0% |
!!! | AAATGACGGATATTTTGTTA+AGG | - | chr8.4:71243724-71243743 | MS.gene81070:intron | 25.0% |
!!! | CTTATTTTTGAACAAGTACT+TGG | - | chr8.4:71243916-71243935 | MS.gene81070:CDS | 25.0% |
AAGAATGAAATCCTTACATC+AGG | + | chr8.4:71243409-71243428 | None:intergenic | 30.0% | |
AGGACTAAAGAAAAACCATT+CGG | + | chr8.4:71242938-71242957 | None:intergenic | 30.0% | |
GAAAATCATGAAACAGTTGA+AGG | - | chr8.4:71243379-71243398 | MS.gene81070:CDS | 30.0% | |
GATAGAATGATATGTGATGA+AGG | - | chr8.4:71243325-71243344 | MS.gene81070:CDS | 30.0% | |
TACCTCTAACCTTAATCTTA+CGG | + | chr8.4:71243038-71243057 | None:intergenic | 30.0% | |
TAGAATGATATGTGATGAAG+GGG | - | chr8.4:71243327-71243346 | MS.gene81070:CDS | 30.0% | |
TCGTTGAGAATGATTTACTA+TGG | - | chr8.4:71243809-71243828 | MS.gene81070:CDS | 30.0% | |
TTGTTGATACAAAACAAACC+TGG | + | chr8.4:71243173-71243192 | None:intergenic | 30.0% | |
! | ATGAAATGTCTAAGTTGAGT+TGG | - | chr8.4:71243944-71243963 | MS.gene81070:CDS | 30.0% |
! | GTTATTGTTTCTTCTTAGAG+TGG | + | chr8.4:71244168-71244187 | None:intergenic | 30.0% |
! | TATCCTCCAAAATTTTCTAG+AGG | - | chr8.4:71243245-71243264 | MS.gene81070:CDS | 30.0% |
! | TGTTTCATGATTTTCGTGAT+CGG | + | chr8.4:71243374-71243393 | None:intergenic | 30.0% |
! | TTCAATCTCTGAAAATGAGA+TGG | - | chr8.4:71243592-71243611 | MS.gene81070:CDS | 30.0% |
!! | AGAGGTACTGAAAATGTTAT+TGG | - | chr8.4:71243051-71243070 | MS.gene81070:CDS | 30.0% |
!! | ATTGGTTCCATATTCTTTTC+TGG | + | chr8.4:71243515-71243534 | None:intergenic | 30.0% |
!! | GAGGTACTGAAAATGTTATT+GGG | - | chr8.4:71243052-71243071 | MS.gene81070:CDS | 30.0% |
!!! | GTAACTTGTTTTTGAGATAG+TGG | + | chr8.4:71242734-71242753 | None:intergenic | 30.0% |
!!! | TTCCTCTTCAGTTTTTTTCT+CGG | + | chr8.4:71243302-71243321 | None:intergenic | 30.0% |
ACAAACCTGGTTATCATCAA+AGG | + | chr8.4:71243160-71243179 | None:intergenic | 35.0% | |
AGCTATAACATTGTTGACAG+TGG | + | chr8.4:71242769-71242788 | None:intergenic | 35.0% | |
ATCATTTCGAGATGATTTCG+GGG | - | chr8.4:71244061-71244080 | MS.gene81070:intron | 35.0% | |
ATGATTTACTATGGAAGCAG+TGG | - | chr8.4:71243818-71243837 | MS.gene81070:CDS | 35.0% | |
CATATCAATGTGTCCACTTT+CGG | + | chr8.4:71243651-71243670 | None:intergenic | 35.0% | |
CATCATTTCGAGATGATTTC+GGG | - | chr8.4:71244060-71244079 | MS.gene81070:intron | 35.0% | |
GAATATGGAACCAATGTTTC+AGG | - | chr8.4:71243520-71243539 | MS.gene81070:CDS | 35.0% | |
GCATCATTTCGAGATGATTT+CGG | - | chr8.4:71244059-71244078 | MS.gene81070:intron | 35.0% | |
GGACTAAAGAAAAACCATTC+GGG | + | chr8.4:71242937-71242956 | None:intergenic | 35.0% | |
GTAAATCATTCTCAACGACT+CGG | + | chr8.4:71243807-71243826 | None:intergenic | 35.0% | |
TACCTTGCCAGAAAAGAATA+TGG | - | chr8.4:71243505-71243524 | MS.gene81070:CDS | 35.0% | |
TTGAAGGAATTCCTGATGTA+AGG | - | chr8.4:71243395-71243414 | MS.gene81070:CDS | 35.0% | |
TTGCAATTGATCATCTCTAG+AGG | + | chr8.4:71244125-71244144 | None:intergenic | 35.0% | |
TTTACAAGCTCTTCATCTGT+TGG | + | chr8.4:71242711-71242730 | None:intergenic | 35.0% | |
TTTGCGTATTTGTAATCACG+AGG | + | chr8.4:71242958-71242977 | None:intergenic | 35.0% | |
! | CAATGTTCTGGATACTTCAA+CGG | - | chr8.4:71244001-71244020 | MS.gene81070:intron | 35.0% |
! | CATTTTCAGAGATTGAAGAC+TGG | + | chr8.4:71243589-71243608 | None:intergenic | 35.0% |
! | GAAGTATCTTTATCGAACTC+AGG | - | chr8.4:71243614-71243633 | MS.gene81070:CDS | 35.0% |
! | GGATTTTATGATTCCGAAAG+TGG | - | chr8.4:71243635-71243654 | MS.gene81070:intron | 35.0% |
! | TGAAGCAGATCTTTTTGACA+TGG | + | chr8.4:71244216-71244235 | None:intergenic | 35.0% |
! | TTCGTTTGAAACTATGGAAG+AGG | - | chr8.4:71243676-71243695 | MS.gene81070:intron | 35.0% |
! | TTGTTTCTTCTTAGAGTGGA+AGG | + | chr8.4:71244164-71244183 | None:intergenic | 35.0% |
!! | AGTCCTCTAGAAAATTTTGG+AGG | + | chr8.4:71243251-71243270 | None:intergenic | 35.0% |
!! | GGTTTGTTTGTGTTTTTACC+TGG | + | chr8.4:71242828-71242847 | None:intergenic | 35.0% |
!! | TTCCATATTCTTTTCTGGCA+AGG | + | chr8.4:71243510-71243529 | None:intergenic | 35.0% |
!!! | TGTCTAAGTTGAGTTGGTTT+TGG | - | chr8.4:71243950-71243969 | MS.gene81070:CDS | 35.0% |
AACCTGGTTATCATCAAAGG+TGG | + | chr8.4:71243157-71243176 | None:intergenic | 40.0% | |
AATGTTTCAGGAACCTCATC+AGG | - | chr8.4:71243532-71243551 | MS.gene81070:CDS | 40.0% | |
AGCCGAGAAAAAAACTGAAG+AGG | - | chr8.4:71243297-71243316 | MS.gene81070:CDS | 40.0% | |
ATGTTTGCAAGTTCGAACCT+TGG | - | chr8.4:71242796-71242815 | MS.gene81070:CDS | 40.0% | |
CCAACAGGAACATAGTTATG+AGG | + | chr8.4:71242675-71242694 | None:intergenic | 40.0% | |
CCTCATAACTATGTTCCTGT+TGG | - | chr8.4:71242672-71242691 | MS.gene81070:CDS | 40.0% | |
CTTGTTGAACATCCTAGTTC+AGG | - | chr8.4:71244026-71244045 | MS.gene81070:intron | 40.0% | |
GAAAAACCATTCGGGATCAT+CGG | + | chr8.4:71242929-71242948 | None:intergenic | 40.0% | |
GACCGTAAGATTAAGGTTAG+AGG | - | chr8.4:71243033-71243052 | MS.gene81070:intron | 40.0% | |
TAAAATCCGATGATCCCGAA+TGG | - | chr8.4:71242920-71242939 | MS.gene81070:intron | 40.0% | |
TACTATAATGGTTGTGCTCC+TGG | - | chr8.4:71243093-71243112 | MS.gene81070:CDS | 40.0% | |
TCATTTCGAGATGATTTCGG+GGG | - | chr8.4:71244062-71244081 | MS.gene81070:intron | 40.0% | |
TGATGAGGTTCCTGAAACAT+TGG | + | chr8.4:71243533-71243552 | None:intergenic | 40.0% | |
TGTTTGCAAGTTCGAACCTT+GGG | - | chr8.4:71242797-71242816 | MS.gene81070:CDS | 40.0% | |
TTTAACAGAAGGACACAGTG+TGG | - | chr8.4:71242988-71243007 | MS.gene81070:intron | 40.0% | |
TTTACAGTGTGGCAATGTTC+TGG | - | chr8.4:71243989-71244008 | MS.gene81070:intron | 40.0% | |
! | AAGTACTTTTCAGCCTGATG+AGG | + | chr8.4:71243548-71243567 | None:intergenic | 40.0% |
! | AGATCTTTTTGACATGGTGG+TGG | + | chr8.4:71244210-71244229 | None:intergenic | 40.0% |
! | AGCAGATCTTTTTGACATGG+TGG | + | chr8.4:71244213-71244232 | None:intergenic | 40.0% |
! | GCAGAGTTCGTTTGAAACTA+TGG | - | chr8.4:71243670-71243689 | MS.gene81070:intron | 40.0% |
! | TACCACCTTTGATGATAACC+AGG | - | chr8.4:71243152-71243171 | MS.gene81070:CDS | 40.0% |
! | TCCTGGTGTTAATAGCAACT+GGG | - | chr8.4:71243110-71243129 | MS.gene81070:CDS | 40.0% |
! | TGCTGAATTAGTCTCTATGC+CGG | - | chr8.4:71243847-71243866 | MS.gene81070:CDS | 40.0% |
! | TGGTCTTGACCGTAAGATTA+AGG | - | chr8.4:71243026-71243045 | MS.gene81070:intron | 40.0% |
! | TTTTTACCTGGTAAGTCCCA+AGG | + | chr8.4:71242816-71242835 | None:intergenic | 40.0% |
AATCTTACGGTCAAGACCAG+TGG | + | chr8.4:71243025-71243044 | None:intergenic | 45.0% | |
AGATGATTTCGGGGGATTTG+AGG | - | chr8.4:71244070-71244089 | MS.gene81070:intron | 45.0% | |
CAAGCTCTTCATCTGTTGGA+CGG | + | chr8.4:71242707-71242726 | None:intergenic | 45.0% | |
GCATAGTATTCGCCTGAACT+AGG | + | chr8.4:71244041-71244060 | None:intergenic | 45.0% | |
TCGGAACTCATGTGTCTACT+TGG | + | chr8.4:71243355-71243374 | None:intergenic | 45.0% | |
! | ACCCAGTTGCTATTAACACC+AGG | + | chr8.4:71243114-71243133 | None:intergenic | 45.0% |
! | CTCCTGGTGTTAATAGCAAC+TGG | - | chr8.4:71243109-71243128 | MS.gene81070:CDS | 45.0% |
!! | TGGTTGGTCTTGGATGATAC+TGG | + | chr8.4:71244190-71244209 | None:intergenic | 45.0% |
!!! | CTTTTTGACATGGTGGTGGT+TGG | + | chr8.4:71244206-71244225 | None:intergenic | 45.0% |
GAAGGACACAGTGTGGATAC+TGG | - | chr8.4:71242995-71243014 | MS.gene81070:intron | 50.0% | |
GACTGGTATGTCGACGAGAA+AGG | + | chr8.4:71243572-71243591 | None:intergenic | 50.0% | |
GGACGGAATCTGAATCCAAC+AGG | + | chr8.4:71242690-71242709 | None:intergenic | 50.0% | |
TGTGGATACTGGAAAGCCAC+TGG | - | chr8.4:71243006-71243025 | MS.gene81070:intron | 50.0% | |
TTCGAACCTTGGGACTTACC+AGG | - | chr8.4:71242807-71242826 | MS.gene81070:CDS | 50.0% | |
! | TCATTCTCAACGACTCGGAC+TGG | + | chr8.4:71243802-71243821 | None:intergenic | 50.0% |
!! | GACATGGTGGTGGTTGGTCT+TGG | + | chr8.4:71244200-71244219 | None:intergenic | 55.0% |
! | CTCAACGACTCGGACTGGAC+AGG | + | chr8.4:71243797-71243816 | None:intergenic | 60.0% |
! | CTCGGACTGGACAGGAAAGC+TGG | + | chr8.4:71243789-71243808 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 71242657 | 71244253 | 71242657 | ID=MS.gene81070 |
chr8.4 | mRNA | 71242657 | 71244253 | 71242657 | ID=MS.gene81070.t1;Parent=MS.gene81070 |
chr8.4 | exon | 71244082 | 71244253 | 71244082 | ID=MS.gene81070.t1.exon1;Parent=MS.gene81070.t1 |
chr8.4 | CDS | 71244082 | 71244253 | 71244082 | ID=cds.MS.gene81070.t1;Parent=MS.gene81070.t1 |
chr8.4 | exon | 71243737 | 71244002 | 71243737 | ID=MS.gene81070.t1.exon2;Parent=MS.gene81070.t1 |
chr8.4 | CDS | 71243737 | 71244002 | 71243737 | ID=cds.MS.gene81070.t1;Parent=MS.gene81070.t1 |
chr8.4 | exon | 71243499 | 71243645 | 71243499 | ID=MS.gene81070.t1.exon3;Parent=MS.gene81070.t1 |
chr8.4 | CDS | 71243499 | 71243645 | 71243499 | ID=cds.MS.gene81070.t1;Parent=MS.gene81070.t1 |
chr8.4 | exon | 71243042 | 71243416 | 71243042 | ID=MS.gene81070.t1.exon4;Parent=MS.gene81070.t1 |
chr8.4 | CDS | 71243042 | 71243416 | 71243042 | ID=cds.MS.gene81070.t1;Parent=MS.gene81070.t1 |
chr8.4 | exon | 71242657 | 71242914 | 71242657 | ID=MS.gene81070.t1.exon5;Parent=MS.gene81070.t1 |
chr8.4 | CDS | 71242657 | 71242914 | 71242657 | ID=cds.MS.gene81070.t1;Parent=MS.gene81070.t1 |
Gene Sequence |
Protein sequence |