AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81071

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81071.t1 MTR_8g023860 87.828 419 45 1 1 413 1 419 0.0 727
MS.gene81071.t1 MTR_8g023840 64.583 432 100 7 1 413 1 398 0.0 515
MS.gene81071.t1 MTR_8g023930 67.910 268 78 2 10 269 22 289 1.54e-131 387
MS.gene81071.t1 MTR_8g023900 64.014 289 93 4 1 280 184 470 1.13e-128 379
MS.gene81071.t1 MTR_8g023900 63.784 185 65 2 1 183 1 185 3.92e-79 252
MS.gene81071.t1 MTR_8g023880 43.478 276 117 9 12 269 7 261 6.02e-56 186
MS.gene81071.t1 MTR_3g093040 50.820 183 74 6 1 177 100 272 3.05e-52 177
MS.gene81071.t1 MTR_5g069030 43.348 233 104 7 8 229 21 236 6.25e-52 184
MS.gene81071.t1 MTR_3g093050 53.659 164 67 4 8 165 18 178 9.24e-51 180
MS.gene81071.t1 MTR_3g093050 53.659 164 67 4 8 165 18 178 1.75e-50 180
MS.gene81071.t1 MTR_6g477900 51.299 154 66 5 12 159 6 156 9.87e-43 150
MS.gene81071.t1 MTR_3g064580 45.055 182 90 4 12 186 6 184 5.85e-42 157
MS.gene81071.t1 MTR_5g014300 45.509 167 82 4 12 170 6 171 6.78e-41 148
MS.gene81071.t1 MTR_2g064090 46.154 156 74 4 12 160 6 158 2.22e-38 142
MS.gene81071.t1 MTR_4g098630 43.750 208 104 9 12 210 6 209 2.88e-38 140
MS.gene81071.t1 MTR_2g086880 48.649 148 69 5 15 161 21 162 7.20e-38 144
MS.gene81071.t1 MTR_2g086880 48.649 148 69 5 15 161 21 162 9.71e-38 143
MS.gene81071.t1 MTR_1g090723 44.767 172 84 5 15 177 11 180 1.83e-37 144
MS.gene81071.t1 MTR_1g090723 44.444 171 85 5 15 177 11 179 3.31e-37 142
MS.gene81071.t1 MTR_1g090723 44.444 171 85 5 15 177 11 179 4.68e-37 142
MS.gene81071.t1 MTR_5g076850 43.976 166 84 4 12 171 6 168 6.10e-37 142
MS.gene81071.t1 MTR_3g109340 46.405 153 75 4 12 160 22 171 6.69e-37 138
MS.gene81071.t1 MTR_5g012080 29.255 376 226 12 9 376 4 347 2.52e-36 136
MS.gene81071.t1 MTR_8g063550 42.384 151 78 5 15 159 9 156 9.17e-36 134
MS.gene81071.t1 MTR_3g109340 46.104 154 75 5 12 160 22 172 9.49e-36 135
MS.gene81071.t1 MTR_3g096140 43.046 151 77 5 15 159 10 157 1.10e-35 132
MS.gene81071.t1 MTR_4g036030 45.223 157 78 5 8 159 3 156 1.92e-35 134
MS.gene81071.t1 MTR_8g063550 42.384 151 78 5 15 159 9 156 2.00e-35 135
MS.gene81071.t1 MTR_8g063550 36.245 229 128 9 15 233 9 229 5.28e-35 134
MS.gene81071.t1 MTR_3g096140 43.046 151 77 5 15 159 10 157 6.41e-35 132
MS.gene81071.t1 MTR_3g070030 47.239 163 69 8 13 163 20 177 9.02e-35 132
MS.gene81071.t1 MTR_8g093580 43.046 151 77 5 15 159 9 156 2.05e-34 134
MS.gene81071.t1 MTR_3g435150 47.134 157 70 8 12 160 16 167 3.47e-34 129
MS.gene81071.t1 MTR_2g080010 39.521 167 81 4 11 160 14 177 3.60e-34 130
MS.gene81071.t1 MTR_8g099750 42.767 159 75 4 9 156 11 164 4.17e-34 127
MS.gene81071.t1 MTR_2g078700 43.671 158 78 4 11 160 22 176 7.47e-34 130
MS.gene81071.t1 MTR_1g069805 41.447 152 84 4 12 161 10 158 9.82e-34 127
MS.gene81071.t1 MTR_4g108760 44.586 157 74 7 12 160 17 168 1.19e-33 129
MS.gene81071.t1 MTR_4g101680 41.379 174 92 6 8 174 3 173 1.24e-33 129
MS.gene81071.t1 MTR_6g084430 42.424 165 84 7 10 168 3 162 2.73e-33 127
MS.gene81071.t1 MTR_0036s0150 42.771 166 85 4 15 172 8 171 3.47e-33 130
MS.gene81071.t1 MTR_2g093810 43.671 158 76 5 13 160 15 169 3.52e-33 127
MS.gene81071.t1 MTR_1g096430 39.535 172 96 5 12 178 7 175 4.29e-33 127
MS.gene81071.t1 MTR_1g008740 42.208 154 82 4 12 160 13 164 4.48e-33 127
MS.gene81071.t1 MTR_1g008740 42.208 154 82 4 12 160 27 178 5.14e-33 127
MS.gene81071.t1 MTR_4g089135 43.662 142 76 3 11 151 14 152 5.18e-33 127
MS.gene81071.t1 MTR_7g100990 40.252 159 82 5 11 159 10 165 6.76e-33 126
MS.gene81071.t1 MTR_1g097300 47.097 155 72 6 5 158 13 158 6.90e-33 130
MS.gene81071.t1 MTR_4g035590 45.912 159 65 7 12 159 8 156 6.93e-33 127
MS.gene81071.t1 MTR_4g081870 44.375 160 70 7 12 159 9 161 7.51e-33 125
MS.gene81071.t1 MTR_2g062730 33.058 242 139 9 12 239 10 242 1.74e-32 125
MS.gene81071.t1 MTR_7g011130 51.969 127 55 5 14 139 21 142 3.05e-32 125
MS.gene81071.t1 MTR_8g467490 39.521 167 83 5 15 166 17 180 3.16e-32 126
MS.gene81071.t1 MTR_7g005280 40.252 159 85 4 11 165 14 166 3.22e-32 122
MS.gene81071.t1 MTR_7g085220 39.412 170 79 6 11 161 7 171 3.62e-32 124
MS.gene81071.t1 MTR_7g097090 41.892 148 81 4 12 157 10 154 6.59e-32 123
MS.gene81071.t1 MTR_8g076110 41.830 153 81 5 12 159 6 155 8.54e-32 123
MS.gene81071.t1 MTR_6g012670 45.752 153 71 6 12 163 20 161 8.80e-32 123
MS.gene81071.t1 MTR_2g064470 40.237 169 87 5 12 173 11 172 9.44e-32 122
MS.gene81071.t1 MTR_3g116070 45.736 129 67 2 12 139 23 149 1.21e-31 123
MS.gene81071.t1 MTR_5g021710 43.137 153 79 5 12 159 8 157 2.33e-31 122
MS.gene81071.t1 MTR_4g134460 42.581 155 81 5 10 160 52 202 2.42e-31 124
MS.gene81071.t1 MTR_5g040420 38.150 173 89 5 9 166 10 179 2.74e-31 123
MS.gene81071.t1 MTR_7g011120 50.781 128 57 5 14 140 10 132 3.24e-31 121
MS.gene81071.t1 MTR_3g088110 40.506 158 79 5 11 159 6 157 6.25e-31 120
MS.gene81071.t1 MTR_2g068920 38.824 170 82 6 10 159 18 185 6.60e-31 120
MS.gene81071.t1 MTR_1g090720 42.675 157 75 4 15 159 45 198 6.87e-31 124
MS.gene81071.t1 MTR_2157s0010 39.394 165 81 6 12 160 8 169 7.23e-31 119
MS.gene81071.t1 MTR_2g068880 38.122 181 90 6 10 170 19 197 8.32e-31 120
MS.gene81071.t1 MTR_4g052620 39.521 167 82 5 1 156 1 159 8.33e-31 119
MS.gene81071.t1 MTR_6g032770 43.846 130 69 3 12 140 18 144 8.41e-31 122
MS.gene81071.t1 MTR_8g094580 33.945 218 110 9 12 209 7 210 9.56e-31 119
MS.gene81071.t1 MTR_6g011860 40.719 167 80 6 9 160 12 174 9.86e-31 122
MS.gene81071.t1 MTR_3g096920 41.718 163 74 6 12 162 7 160 1.01e-30 119
MS.gene81071.t1 MTR_5g041940 41.772 158 77 7 12 159 3 155 1.63e-30 118
MS.gene81071.t1 MTR_7g085260 46.667 135 65 5 8 139 14 144 1.79e-30 121
MS.gene81071.t1 MTR_3g096920 46.512 129 62 4 12 139 7 129 1.86e-29 117
MS.gene81071.t1 MTR_8g024480 38.830 188 93 8 11 182 14 195 5.30e-29 117
MS.gene81071.t1 MTR_2g079990 35.294 204 112 8 12 206 16 208 5.63e-29 116
MS.gene81071.t1 MTR_4g075980 41.892 148 81 4 15 160 18 162 1.69e-28 114
MS.gene81071.t1 MTR_3g098810 37.500 168 86 5 12 165 14 176 2.72e-28 112
MS.gene81071.t1 MTR_8g059170 34.862 218 124 9 12 218 14 224 5.91e-28 113
MS.gene81071.t1 MTR_7g105170 36.905 168 89 6 9 161 1 166 8.11e-28 110
MS.gene81071.t1 MTR_3g096140 39.855 138 74 5 28 159 2 136 8.57e-28 112
MS.gene81071.t1 MTR_3g070040 39.881 168 83 6 14 171 10 169 1.16e-27 112
MS.gene81071.t1 MTR_3g098810 42.537 134 69 4 9 139 11 139 1.72e-27 107
MS.gene81071.t1 MTR_5g090970 31.481 270 146 10 15 252 21 283 2.70e-27 110
MS.gene81071.t1 MTR_2g086690 39.103 156 82 5 13 156 5 159 2.80e-27 109
MS.gene81071.t1 MTR_5g090970 31.111 270 146 10 15 252 21 282 7.87e-27 109
MS.gene81071.t1 MTR_2g079990 41.860 129 69 4 12 139 16 139 1.03e-26 110
MS.gene81071.t1 MTR_8g093790 33.333 165 89 6 12 175 10 154 1.00e-19 86.7
MS.gene81071.t1 MTR_4g094302 28.409 176 99 7 12 173 11 173 2.86e-19 85.5
MS.gene81071.t1 MTR_4g094302 34.351 131 70 6 12 139 11 128 1.66e-18 82.4
MS.gene81071.t1 MTR_8g094580 31.250 160 79 7 70 209 8 156 1.24e-16 79.0
MS.gene81071.t1 MTR_3g096400 31.250 176 96 4 12 171 7 173 1.81e-16 78.2
MS.gene81071.t1 MTR_7g083330 30.636 173 99 7 12 174 18 179 9.62e-16 75.9
MS.gene81071.t1 MTR_7g070140 38.095 84 50 2 58 139 6 89 8.20e-14 68.6
MS.gene81071.t1 MTR_7g083360 30.827 133 78 5 12 139 10 133 4.28e-12 64.3
MS.gene81071.t1 MTR_7g116460 26.425 193 116 8 18 194 11 193 2.00e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81071.t1 AT4G01550 51.724 174 79 3 14 185 6 176 2.98e-53 184
MS.gene81071.t1 AT4G35580 52.469 162 68 4 8 163 5 163 9.82e-52 182
MS.gene81071.t1 AT4G35580 52.469 162 68 4 8 163 5 163 1.07e-51 181
MS.gene81071.t1 AT4G35580 52.469 162 68 4 8 163 5 163 1.09e-51 181
MS.gene81071.t1 AT3G49530 51.235 162 67 5 8 161 9 166 9.46e-50 174
MS.gene81071.t1 AT3G49530 51.235 162 67 5 8 161 9 166 2.66e-49 174
MS.gene81071.t1 AT1G33060 53.797 158 64 4 8 159 20 174 3.01e-49 177
MS.gene81071.t1 AT1G33060 53.797 158 64 4 8 159 20 174 3.39e-49 177
MS.gene81071.t1 AT5G24590 51.875 160 69 4 8 161 9 166 2.18e-48 171
MS.gene81071.t1 AT4G01520 37.991 229 121 7 13 228 5 225 5.81e-44 155
MS.gene81071.t1 AT4G17980 48.101 158 73 3 12 161 6 162 1.14e-42 150
MS.gene81071.t1 AT4G01540 38.158 228 120 7 14 228 6 225 2.58e-42 153
MS.gene81071.t1 AT4G17980 48.101 158 73 3 12 161 6 162 3.31e-42 150
MS.gene81071.t1 AT4G01540 38.158 228 120 7 14 228 6 225 3.42e-42 154
MS.gene81071.t1 AT4G01540 37.445 227 123 6 14 228 6 225 3.50e-42 154
MS.gene81071.t1 AT4G01540 38.158 228 120 7 14 228 6 225 5.46e-42 154
MS.gene81071.t1 AT3G10490 48.026 152 69 4 15 159 30 178 4.47e-41 145
MS.gene81071.t1 AT5G17260 49.032 155 69 4 12 159 6 157 9.63e-41 151
MS.gene81071.t1 AT3G17730 45.251 179 79 6 12 184 6 171 1.29e-40 145
MS.gene81071.t1 AT3G10480 47.368 152 70 4 15 159 30 178 3.34e-40 149
MS.gene81071.t1 AT3G10480 47.682 151 70 4 15 159 30 177 3.83e-40 149
MS.gene81071.t1 AT3G10490 48.026 152 69 4 15 159 30 178 7.01e-40 148
MS.gene81071.t1 AT5G46590 48.750 160 73 5 12 164 6 163 3.21e-39 142
MS.gene81071.t1 AT1G65910 49.032 155 70 4 12 160 6 157 8.53e-39 147
MS.gene81071.t1 AT3G03200 45.294 170 81 5 12 172 6 172 3.01e-38 144
MS.gene81071.t1 AT1G02230 45.098 153 79 4 13 162 4 154 6.66e-37 138
MS.gene81071.t1 AT1G32510 45.029 171 73 6 12 166 6 171 1.59e-36 135
MS.gene81071.t1 AT5G46590 51.538 130 60 3 12 140 6 133 2.92e-36 134
MS.gene81071.t1 AT2G27300 39.086 197 102 7 1 193 11 193 3.43e-36 135
MS.gene81071.t1 AT5G61430 46.497 157 71 7 12 160 16 167 4.26e-36 135
MS.gene81071.t1 AT2G24430 44.516 155 78 5 12 161 16 167 9.43e-36 134
MS.gene81071.t1 AT2G24430 44.516 155 78 5 12 161 16 167 9.43e-36 134
MS.gene81071.t1 AT1G12260 43.312 157 81 5 8 159 3 156 4.33e-35 132
MS.gene81071.t1 AT1G54330 47.682 151 73 4 12 159 6 153 5.99e-35 131
MS.gene81071.t1 AT1G12260 43.312 157 81 5 8 159 3 156 8.96e-35 133
MS.gene81071.t1 AT3G44290 43.210 162 77 6 1 161 11 158 1.05e-34 129
MS.gene81071.t1 AT5G04410 43.353 173 84 6 15 177 12 180 1.15e-34 135
MS.gene81071.t1 AT5G39610 44.872 156 73 6 12 159 20 170 1.32e-34 130
MS.gene81071.t1 AT5G39820 48.551 138 67 3 10 146 18 152 1.46e-34 131
MS.gene81071.t1 AT5G62380 36.364 231 125 8 8 228 3 221 2.88e-34 130
MS.gene81071.t1 AT5G62380 36.364 231 125 8 8 228 3 221 2.88e-34 130
MS.gene81071.t1 AT5G07680 45.570 158 71 7 12 160 17 168 2.96e-34 130
MS.gene81071.t1 AT5G07680 45.570 158 71 7 12 160 3 154 3.09e-34 130
MS.gene81071.t1 AT1G69490 42.405 158 76 6 12 159 9 161 3.17e-34 128
MS.gene81071.t1 AT3G10480 40.000 185 68 6 15 159 30 211 4.14e-34 133
MS.gene81071.t1 AT3G15170 45.223 157 75 5 12 160 20 173 5.93e-34 129
MS.gene81071.t1 AT3G10500 47.368 152 71 5 15 160 12 160 7.46e-34 133
MS.gene81071.t1 AT1G62700 39.891 183 99 6 8 185 3 179 8.58e-34 130
MS.gene81071.t1 AT1G62700 39.891 183 99 6 8 185 3 179 8.58e-34 130
MS.gene81071.t1 AT3G44290 43.210 162 77 6 1 161 11 158 1.44e-33 128
MS.gene81071.t1 AT5G22290 33.735 249 141 9 2 247 19 246 1.50e-33 128
MS.gene81071.t1 AT1G33280 46.053 152 75 5 12 159 8 156 1.68e-33 127
MS.gene81071.t1 AT3G04060 42.308 156 78 6 12 159 20 171 3.79e-33 127
MS.gene81071.t1 AT5G53950 48.855 131 63 3 10 139 15 142 4.44e-33 128
MS.gene81071.t1 AT1G76420 42.038 157 77 5 12 160 22 172 5.42e-33 127
MS.gene81071.t1 AT1G01720 42.236 161 77 6 9 159 4 158 6.41e-33 125
MS.gene81071.t1 AT3G18400 42.593 162 81 6 10 164 3 159 7.52e-33 126
MS.gene81071.t1 AT3G29035 49.612 129 59 5 12 139 24 147 8.51e-33 126
MS.gene81071.t1 AT1G26870 42.857 161 74 5 15 160 19 176 9.77e-33 128
MS.gene81071.t1 AT5G66300 42.857 154 79 5 12 159 12 162 1.06e-32 125
MS.gene81071.t1 AT1G56010 36.453 203 98 5 12 187 19 217 1.29e-32 125
MS.gene81071.t1 AT2G18060 40.113 177 94 6 12 179 9 182 2.27e-32 125
MS.gene81071.t1 AT2G18060 40.113 177 94 6 12 179 9 182 2.27e-32 125
MS.gene81071.t1 AT1G79580 45.395 152 77 5 12 159 17 166 2.38e-32 126
MS.gene81071.t1 AT1G79580 45.395 152 77 5 12 159 17 166 2.38e-32 126
MS.gene81071.t1 AT1G79580 45.395 152 77 5 12 159 17 166 2.38e-32 126
MS.gene81071.t1 AT1G79580 45.395 152 77 5 12 159 17 166 2.38e-32 126
MS.gene81071.t1 AT1G79580 45.395 152 77 5 12 159 17 166 2.38e-32 126
MS.gene81071.t1 AT1G34190 46.753 154 69 5 15 160 19 167 2.73e-32 128
MS.gene81071.t1 AT5G08790 41.250 160 77 6 11 159 6 159 3.65e-32 123
MS.gene81071.t1 AT3G04070 35.160 219 114 7 12 214 10 216 4.14e-32 124
MS.gene81071.t1 AT1G71930 43.137 153 79 5 12 159 9 158 4.43e-32 124
MS.gene81071.t1 AT1G71930 43.137 153 79 5 12 159 9 158 4.43e-32 124
MS.gene81071.t1 AT1G61110 40.936 171 79 6 7 159 11 177 5.43e-32 124
MS.gene81071.t1 AT3G15510 39.062 192 91 7 16 184 21 209 6.19e-32 124
MS.gene81071.t1 AT1G34180 46.053 152 73 4 15 160 19 167 1.98e-31 125
MS.gene81071.t1 AT4G27410 35.545 211 109 9 12 210 14 209 2.20e-31 121
MS.gene81071.t1 AT4G36160 36.449 214 106 9 12 199 14 223 2.28e-31 123
MS.gene81071.t1 AT4G36160 36.449 214 106 9 12 199 10 219 2.48e-31 123
MS.gene81071.t1 AT4G36160 36.449 214 106 9 12 199 10 219 2.48e-31 123
MS.gene81071.t1 AT3G15500 35.321 218 122 9 12 220 14 221 2.55e-31 122
MS.gene81071.t1 AT2G02450 42.953 149 77 5 15 159 54 198 3.27e-31 123
MS.gene81071.t1 AT4G10350 42.604 169 86 6 12 172 9 174 3.93e-31 122
MS.gene81071.t1 AT2G02450 42.953 149 77 5 15 159 54 198 4.10e-31 123
MS.gene81071.t1 AT5G18270 41.509 159 81 5 9 159 18 172 4.17e-31 122
MS.gene81071.t1 AT1G34180 46.053 152 73 4 15 160 19 167 5.36e-31 125
MS.gene81071.t1 AT5G09330 43.709 151 76 4 15 159 9 156 1.06e-30 123
MS.gene81071.t1 AT5G09330 43.709 151 76 4 15 159 9 156 1.06e-30 123
MS.gene81071.t1 AT5G09330 43.709 151 76 4 15 159 9 156 1.06e-30 123
MS.gene81071.t1 AT5G09330 43.709 151 76 4 15 159 9 156 1.06e-30 123
MS.gene81071.t1 AT5G09330 43.709 151 76 4 15 159 9 156 1.06e-30 123
MS.gene81071.t1 AT2G17040 40.741 162 85 5 15 168 9 167 1.25e-30 119
MS.gene81071.t1 AT5G18270 40.881 159 82 5 9 159 18 172 1.52e-30 120
MS.gene81071.t1 AT5G13180 39.610 154 82 4 11 159 13 160 1.54e-30 118
MS.gene81071.t1 AT5G04395 42.254 142 68 4 12 140 28 168 1.69e-30 116
MS.gene81071.t1 AT5G22380 41.139 158 81 5 10 156 3 159 2.89e-30 117
MS.gene81071.t1 AT3G61910 39.645 169 79 6 11 159 10 175 4.05e-30 119
MS.gene81071.t1 AT1G52890 37.912 182 98 6 6 179 8 182 4.39e-30 118
MS.gene81071.t1 AT3G04070 44.697 132 66 4 12 139 10 138 6.29e-30 119
MS.gene81071.t1 AT5G64060 41.558 154 75 5 15 159 9 156 1.09e-29 118
MS.gene81071.t1 AT1G02250 42.208 154 84 4 13 163 4 155 1.21e-29 118
MS.gene81071.t1 AT2G33480 41.176 153 78 5 11 159 14 158 3.99e-29 114
MS.gene81071.t1 AT4G27410 33.628 226 110 10 12 210 14 226 4.02e-29 115
MS.gene81071.t1 AT5G63790 39.375 160 80 6 11 159 49 202 6.21e-29 115
MS.gene81071.t1 AT2G33480 40.645 155 78 5 11 159 14 160 6.86e-29 114
MS.gene81071.t1 AT5G63790 39.375 160 80 6 11 159 59 212 7.57e-29 115
MS.gene81071.t1 AT1G77450 38.095 168 89 5 11 169 9 170 9.41e-29 113
MS.gene81071.t1 AT2G43000 34.872 195 108 7 15 195 21 210 9.87e-29 114
MS.gene81071.t1 AT1G01010 42.949 156 79 4 14 161 5 158 1.72e-28 116
MS.gene81071.t1 AT3G04420 40.000 170 98 4 13 180 4 171 1.79e-28 113
MS.gene81071.t1 AT3G12910 29.964 277 157 9 15 262 24 292 1.91e-28 114
MS.gene81071.t1 AT4G28530 37.952 166 84 5 12 160 10 173 2.33e-28 114
MS.gene81071.t1 AT3G04420 40.000 170 98 4 13 180 4 171 2.94e-28 114
MS.gene81071.t1 AT3G12977 36.957 184 96 7 12 184 18 192 3.14e-28 112
MS.gene81071.t1 AT1G34180 42.683 164 73 5 15 160 19 179 3.63e-28 115
MS.gene81071.t1 AT2G46770 38.462 169 81 6 11 159 15 180 6.41e-28 113
MS.gene81071.t1 AT1G34180 42.683 164 73 5 15 160 19 179 7.75e-28 115
MS.gene81071.t1 AT1G02220 42.857 147 79 4 12 157 3 145 2.46e-27 112
MS.gene81071.t1 AT1G32770 40.120 167 76 7 12 159 16 177 4.02e-27 111
MS.gene81071.t1 AT3G44350 32.967 182 109 6 10 179 3 183 5.86e-27 108
MS.gene81071.t1 AT1G52880 35.377 212 112 7 16 211 21 223 8.49e-27 109
MS.gene81071.t1 AT3G44350 37.594 133 79 3 10 139 3 134 1.70e-25 102
MS.gene81071.t1 AT1G32870 44.156 154 73 6 15 160 13 161 2.67e-24 105
MS.gene81071.t1 AT1G32870 44.156 154 73 6 15 160 13 161 3.31e-24 105
MS.gene81071.t1 AT1G32870 44.156 154 73 6 15 160 49 197 4.12e-24 105
MS.gene81071.t1 AT3G04430 37.037 135 69 5 18 140 6 136 5.53e-21 90.5
MS.gene81071.t1 AT5G64530 36.154 130 65 6 12 139 3 116 5.67e-19 84.0
MS.gene81071.t1 AT5G64530 36.154 130 65 6 12 139 3 116 1.32e-18 83.6
MS.gene81071.t1 AT1G56010 34.483 145 66 4 70 187 8 150 2.29e-18 84.7
MS.gene81071.t1 AT5G61430 41.509 106 52 5 63 160 1 104 4.49e-18 84.3
MS.gene81071.t1 AT3G12977 37.600 125 63 5 70 184 20 139 1.33e-17 81.6
MS.gene81071.t1 AT4G28530 41.284 109 47 3 12 105 10 116 9.34e-17 80.9
MS.gene81071.t1 AT4G10350 38.655 119 64 4 61 172 11 127 1.12e-16 80.5
MS.gene81071.t1 AT3G10490 46.250 80 34 3 87 159 1 78 2.05e-15 77.4
MS.gene81071.t1 AT3G10490 46.250 80 34 3 87 159 1 78 2.05e-15 77.4
MS.gene81071.t1 AT3G56530 32.000 150 94 5 12 156 52 198 1.75e-13 71.2
MS.gene81071.t1 AT2G33480 36.735 98 54 3 68 159 8 103 8.39e-13 67.8
MS.gene81071.t1 AT3G55210 30.723 166 97 9 6 156 4 166 4.10e-12 66.6
MS.gene81071.t1 AT2G18060 39.362 94 47 4 94 179 3 94 8.67e-12 65.9
MS.gene81071.t1 AT5G14000 30.357 112 71 3 12 123 15 119 1.27e-11 62.8
MS.gene81071.t1 AT5G14490 28.409 176 102 6 12 169 58 227 5.79e-11 63.9
MS.gene81071.t1 AT5G14490 28.409 176 102 6 12 169 55 224 6.13e-11 63.9
MS.gene81071.t1 AT5G14490 28.409 176 102 6 12 169 58 227 9.09e-11 63.5
MS.gene81071.t1 AT5G14490 28.409 176 102 6 12 169 55 224 9.99e-11 62.8

Find 70 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGATTCCATATTTATTTC+TGG 0.145339 8.4:+71236848 None:intergenic
AGTACCTTTCGAGATGATTT+TGG 0.182200 8.4:-71235637 MS.gene81071:CDS
AGGGGTAGCAATAATATTAT+TGG 0.231520 8.4:-71237737 MS.gene81071:CDS
GCATCGTGAATTGGCGAGTT+TGG 0.245634 8.4:+71236761 None:intergenic
AAATATGGAATCAATATTTC+AGG 0.281347 8.4:-71236840 MS.gene81071:CDS
AATGATTATTGACGGGGATT+TGG 0.293193 8.4:-71236663 MS.gene81071:CDS
GATGTTGTCATTTCTAAAAT+AGG 0.297612 8.4:+71236739 None:intergenic
TACTATAGTGGTCGTGTTCC+TGG 0.304206 8.4:-71237695 MS.gene81071:CDS
CAAAGAGCAAGAGGTTTAAA+AGG 0.322782 8.4:-71237814 MS.gene81071:CDS
TTTAAAAGGACAACTAATAA+TGG 0.327657 8.4:-71237800 MS.gene81071:CDS
GGGGTAGCAATAATATTATT+GGG 0.331309 8.4:-71237736 MS.gene81071:CDS
TTCAACTGCAGATATATCTT+TGG 0.332842 8.4:-71235590 MS.gene81071:CDS
TGGAAAGGATCGAAAGATTA+AGG 0.337849 8.4:-71237762 MS.gene81071:CDS
CTAAAATAGGCATCGTGAAT+TGG 0.340882 8.4:+71236752 None:intergenic
GTCAAGAGTCGGAGGAAATA+AGG 0.354940 8.4:+71238133 None:intergenic
CATCGTGAATTGGCGAGTTT+GGG 0.364030 8.4:+71236762 None:intergenic
TCAACGCGTGGTAATGTTCC+TGG 0.366029 8.4:-71235712 MS.gene81071:CDS
TACTTTGCCAGAAATAAATA+TGG 0.372071 8.4:-71236855 MS.gene81071:CDS
TCCTCTTCAATGGTTTCAAA+TGG 0.379573 8.4:+71236704 None:intergenic
GGATCGAAAGATTAAGGTTA+GGG 0.381317 8.4:-71237756 MS.gene81071:CDS
TTTCTTGAACATCCTAGTTC+AGG 0.382346 8.4:-71235763 MS.gene81071:CDS
GATAGAAAACAGGTGCTTCC+AGG 0.383330 8.4:+71235694 None:intergenic
TTTGCATACTTATAATCAAT+AGG 0.394789 8.4:+71237833 None:intergenic
TTCCTGGTGTTAACAGCAGC+TGG 0.401870 8.4:-71237679 MS.gene81071:CDS
GAACTTATCTTCCTCTTCAA+TGG 0.404183 8.4:+71236694 None:intergenic
TACTTGCATACATCAACTTC+AGG 0.414938 8.4:+71238005 None:intergenic
AAGACTCTTGTTTACTATAG+TGG 0.415807 8.4:-71237707 MS.gene81071:CDS
CCAGTCCGAGTCGTTGAAAA+TGG 0.421990 8.4:-71236627 MS.gene81071:CDS
TGGCTGGTCTTGGATGATAC+TGG 0.422975 8.4:+71235509 None:intergenic
GACATGAAGATGGCTGGTCT+TGG 0.436307 8.4:+71235499 None:intergenic
CGATATTCTTGATACTTCAA+TGG 0.439525 8.4:-71235788 MS.gene81071:CDS
AGGATCGAAAGATTAAGGTT+AGG 0.440394 8.4:-71237757 MS.gene81071:CDS
TCGTTGAAAATGGTCTACTA+TGG 0.448952 8.4:-71236617 MS.gene81071:CDS
ATTCTTTAAAGATAGAAAAC+AGG 0.461828 8.4:+71235684 None:intergenic
GTCAGTTCAATGATTATTGA+CGG 0.463736 8.4:-71236671 MS.gene81071:CDS
ACTCTTGACCATGTTCCTGT+TGG 0.471228 8.4:-71238119 MS.gene81071:CDS
TTCAATCTCTGAAAATGAGC+AGG 0.480194 8.4:-71236795 MS.gene81071:CDS
TCAGTTCAATGATTATTGAC+GGG 0.480425 8.4:-71236670 MS.gene81071:CDS
TCGAAAAGAGCTGCTTTAAG+AGG 0.483514 8.4:-71235478 MS.gene81071:CDS
GGTCGGAATCTGAATCCAAC+AGG 0.494801 8.4:+71238104 None:intergenic
GCAGAGTATTCGCCTGAACT+AGG 0.495091 8.4:+71235751 None:intergenic
TCGGAACTCATGTGTCTACT+TGG 0.499283 8.4:+71237036 None:intergenic
TCCATTTGAAACCATTGAAG+AGG 0.526651 8.4:-71236705 MS.gene81071:CDS
GATGCATATATATGTGATGA+AGG 0.526843 8.4:-71237063 MS.gene81071:CDS
CTTACAAGCTCTTCATCTGT+TGG 0.528039 8.4:+71238083 None:intergenic
ACAAACCTTGTCATCTTCAA+AGG 0.536374 8.4:+71237631 None:intergenic
GGAATCAATATTTCAGGCAC+AGG 0.539733 8.4:-71236834 MS.gene81071:CDS
TATGAACCTTGGGAGTTACC+AGG 0.553928 8.4:-71237984 MS.gene81071:intron
TGTATGCAAGTATGAACCTT+GGG 0.557609 8.4:-71237994 MS.gene81071:CDS
CAAGCTCTTCATCTGTTGGT+CGG 0.563002 8.4:+71238087 None:intergenic
AGGTATAACATTGTTGACAA+TGG 0.563065 8.4:+71238025 None:intergenic
GTGAATTGGCGAGTTTGGGA+TGG 0.564115 8.4:+71236766 None:intergenic
ATAAGTATGCAAAGAGCAAG+AGG 0.565864 8.4:-71237823 MS.gene81071:CDS
TGCTGAAGTAGTCTCTATGC+CGG 0.566096 8.4:-71236579 MS.gene81071:intron
TCCTGGTGTTAACAGCAGCT+GGG 0.577857 8.4:-71237678 MS.gene81071:CDS
CAGTTCAATGATTATTGACG+GGG 0.578711 8.4:-71236669 MS.gene81071:CDS
ATCTGCAGTTGAATCACAAG+AGG 0.597794 8.4:+71235600 None:intergenic
ATGCATATATATGTGATGAA+GGG 0.603466 8.4:-71237062 MS.gene81071:CDS
ATCTGAATCCAACAGGAACA+TGG 0.603819 8.4:+71238111 None:intergenic
TAAAATCAGATGATCCAGAA+TGG 0.605424 8.4:-71237868 MS.gene81071:CDS
TACCACCTTTGAAGATGACA+AGG 0.610149 8.4:-71237636 MS.gene81071:intron
ACCCAGCTGCTGTTAACACC+AGG 0.624004 8.4:+71237677 None:intergenic
AACCTTGTCATCTTCAAAGG+TGG 0.630537 8.4:+71237634 None:intergenic
ACAGGAACATGGTCAAGAGT+CGG 0.636129 8.4:+71238122 None:intergenic
TGCATATATATGTGATGAAG+GGG 0.640466 8.4:-71237061 MS.gene81071:CDS
GCTGCTTTAAGAGGATCTTG+AGG 0.651591 8.4:-71235469 None:intergenic
ATGTATGCAAGTATGAACCT+TGG 0.657459 8.4:-71237995 MS.gene81071:CDS
GGAACATGGTCAAGAGTCGG+AGG 0.664688 8.4:+71238125 None:intergenic
GATCGAAAGATTAAGGTTAG+GGG 0.678144 8.4:-71237755 MS.gene81071:CDS
AAATTGTTGAAATCAACGCG+TGG 0.727480 8.4:-71235724 MS.gene81071:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGATGAAAAACATTAAAA+AGG + chr8.4:71235706-71235725 None:intergenic 15.0%
!! ATTTCTATTATCATTTATCA+AGG + chr8.4:71236651-71236670 None:intergenic 15.0%
!! TTTGAACAATATATATTTAC+CGG + chr8.4:71237511-71237530 None:intergenic 15.0%
!!! AGAACTTATATTTGTTTTAT+AGG - chr8.4:71236726-71236745 MS.gene81071:CDS 15.0%
!!! TTTTATGAGAAAATAATGAT+GGG + chr8.4:71235677-71235696 None:intergenic 15.0%
!!! TTTTTATGAGAAAATAATGA+TGG + chr8.4:71235678-71235697 None:intergenic 15.0%
!! AAATATGGAATCAATATTTC+AGG - chr8.4:71236771-71236790 MS.gene81071:CDS 20.0%
!! AAGAAAATAAGCATTATGAA+AGG + chr8.4:71237784-71237803 None:intergenic 20.0%
!! ATATGATACCAAAAGAAAAA+AGG + chr8.4:71236176-71236195 None:intergenic 20.0%
!! TATGATACCAAAAGAAAAAA+GGG + chr8.4:71236175-71236194 None:intergenic 20.0%
!! TTTAAAAGGACAACTAATAA+TGG - chr8.4:71235811-71235830 MS.gene81071:intron 20.0%
!! TTTATGAGAAAATAATGATG+GGG + chr8.4:71235676-71235695 None:intergenic 20.0%
!! TTTGCATACTTATAATCAAT+AGG + chr8.4:71235781-71235800 None:intergenic 20.0%
!!! ACTATTTTCCTATATATGAT+TGG - chr8.4:71236094-71236113 MS.gene81071:intron 20.0%
!!! ACTTATATTTGTTTTATAGG+TGG - chr8.4:71236729-71236748 MS.gene81071:CDS 20.0%
!!! ATAAATTGTGAAAAAGTACT+TGG - chr8.4:71237630-71237649 MS.gene81071:intron 20.0%
!!! ATTCTTTAAAGATAGAAAAC+AGG + chr8.4:71237930-71237949 None:intergenic 20.0%
!!! ATTGATTCCATATTTATTTC+TGG + chr8.4:71236766-71236785 None:intergenic 20.0%
!!! CAAAAGTTTCTTTATTTTCA+TGG + chr8.4:71236601-71236620 None:intergenic 20.0%
!!! CTTATATTTGTTTTATAGGT+GGG - chr8.4:71236730-71236749 MS.gene81071:CDS 20.0%
!!! GAAAATAAAGAAACTTTTGA+AGG - chr8.4:71236602-71236621 MS.gene81071:CDS 20.0%
!!! TGTTTTCTATCTTTAAAGAA+TGG - chr8.4:71237929-71237948 MS.gene81071:intron 20.0%
!!! TTCAGTTTTTGAATGTTAAT+AGG - chr8.4:71236355-71236374 MS.gene81071:intron 20.0%
!!! TTGTTTGTTTTTTTTTTACC+TGG + chr8.4:71235648-71235667 None:intergenic 20.0%
! AAAACACAAATCACAAACAA+TGG - chr8.4:71236231-71236250 MS.gene81071:intron 25.0%
! ACACTGTCTTTGTAATTAAA+AGG + chr8.4:71236264-71236283 None:intergenic 25.0%
! ATACACACTTTCATATCATT+TGG + chr8.4:71237536-71237555 None:intergenic 25.0%
! ATGCATATATATGTGATGAA+GGG - chr8.4:71236549-71236568 MS.gene81071:intron 25.0%
! CAGGAACAATATATATTTAC+CGG + chr8.4:71237054-71237073 None:intergenic 25.0%
! TACTTTGCCAGAAATAAATA+TGG - chr8.4:71236756-71236775 MS.gene81071:CDS 25.0%
! TATATATTGTTCCTGATGTA+AGG - chr8.4:71237059-71237078 MS.gene81071:CDS 25.0%
!! AAATTTTGCCAACAAAGTTT+TGG - chr8.4:71237124-71237143 MS.gene81071:CDS 25.0%
!! AAATTTTGCGAACAAAGTTT+TGG - chr8.4:71236667-71236686 MS.gene81071:CDS 25.0%
!! TTTGGTATCATATTTGTTAG+AGG - chr8.4:71236183-71236202 MS.gene81071:intron 25.0%
!!! AGTTTCTTTATTTTCATGGT+CGG + chr8.4:71236597-71236616 None:intergenic 25.0%
!!! GATGTTGTCATTTCTAAAAT+AGG + chr8.4:71236875-71236894 None:intergenic 25.0%
!!! GGTTTGTTTTGTTACAATAA+AGG - chr8.4:71235996-71236015 MS.gene81071:intron 25.0%
AAAAGACTAAAAGAGTGACT+TGG + chr8.4:71236336-71236355 None:intergenic 30.0%
AAAAGTCCGCTACAAAATTT+CGG + chr8.4:71236477-71236496 None:intergenic 30.0%
AGGGGTAGCAATAATATTAT+TGG - chr8.4:71235874-71235893 MS.gene81071:intron 30.0%
AGGTATAACATTGTTGACAA+TGG + chr8.4:71235589-71235608 None:intergenic 30.0%
CATTCTAGTAGCATTTCAAA+AGG + chr8.4:71237760-71237779 None:intergenic 30.0%
CGATATTCTTGATACTTCAA+TGG - chr8.4:71237823-71237842 MS.gene81071:CDS 30.0%
GACAAAACATGAGTTTATTC+AGG - chr8.4:71236067-71236086 MS.gene81071:intron 30.0%
GATGCATATATATGTGATGA+AGG - chr8.4:71236548-71236567 MS.gene81071:intron 30.0%
GGGGTAGCAATAATATTATT+GGG - chr8.4:71235875-71235894 MS.gene81071:intron 30.0%
GTCAGTTCAATGATTATTGA+CGG - chr8.4:71236940-71236959 MS.gene81071:intron 30.0%
TAAAATCAGATGATCCAGAA+TGG - chr8.4:71235743-71235762 MS.gene81071:CDS 30.0%
TCAGTTCAATGATTATTGAC+GGG - chr8.4:71236941-71236960 MS.gene81071:intron 30.0%
TGCATATATATGTGATGAAG+GGG - chr8.4:71236550-71236569 MS.gene81071:intron 30.0%
TTCAACTGCAGATATATCTT+TGG - chr8.4:71238021-71238040 MS.gene81071:CDS 30.0%
TTGGATGAAATGAAATGTCT+AGG - chr8.4:71237649-71237668 MS.gene81071:CDS 30.0%
! AAGACTCTTGTTTACTATAG+TGG - chr8.4:71235904-71235923 MS.gene81071:intron 30.0%
! GGACAACTAATAATGGTTTT+TGG - chr8.4:71235818-71235837 MS.gene81071:intron 30.0%
! GTTTTTGCGTTTTCTTATAG+TGG + chr8.4:71238083-71238102 None:intergenic 30.0%
! TATCATCCGAAATTTTGTAG+CGG - chr8.4:71236468-71236487 MS.gene81071:intron 30.0%
! TCTTCTACAATTTTACAGTG+TGG - chr8.4:71237800-71237819 MS.gene81071:CDS 30.0%
!! CTTTAAAGCCAAAACTTTGT+TGG + chr8.4:71236678-71236697 None:intergenic 30.0%
!! GATGTTGTCCTTTCTAAAAT+AGG + chr8.4:71237332-71237351 None:intergenic 30.0%
!!! CTTTGAACCCTTTTTTCTTT+TGG - chr8.4:71236165-71236184 MS.gene81071:intron 30.0%
!!! GTAACTTGTTTTTGAGATAG+TGG + chr8.4:71235554-71235573 None:intergenic 30.0%
AAATTGTTGAAATCAACGCG+TGG - chr8.4:71237887-71237906 MS.gene81071:intron 35.0%
AATGATTATTGACGGGGATT+TGG - chr8.4:71236948-71236967 MS.gene81071:intron 35.0%
ACAAACCTTGTCATCTTCAA+AGG + chr8.4:71235983-71236002 None:intergenic 35.0%
AGCTGAGAAAAAAGCTGAAA+AGG - chr8.4:71236520-71236539 MS.gene81071:intron 35.0%
AGGATCGAAAGATTAAGGTT+AGG - chr8.4:71235854-71235873 MS.gene81071:intron 35.0%
ATAAGTATGCAAAGAGCAAG+AGG - chr8.4:71235788-71235807 MS.gene81071:CDS 35.0%
ATGTATGCAAGTATGAACCT+TGG - chr8.4:71235616-71235635 MS.gene81071:CDS 35.0%
CAAAGAGCAAGAGGTTTAAA+AGG - chr8.4:71235797-71235816 MS.gene81071:intron 35.0%
CAGAACAGCCAATCATATAT+AGG + chr8.4:71236105-71236124 None:intergenic 35.0%
CAGTTCAATGATTATTGACG+GGG - chr8.4:71236942-71236961 MS.gene81071:intron 35.0%
GAACTTATCTTCCTCTTCAA+TGG + chr8.4:71236920-71236939 None:intergenic 35.0%
GATCGAAAGATTAAGGTTAG+GGG - chr8.4:71235856-71235875 MS.gene81071:intron 35.0%
GGATCGAAAGATTAAGGTTA+GGG - chr8.4:71235855-71235874 MS.gene81071:intron 35.0%
TACTTGCATACATCAACTTC+AGG + chr8.4:71235609-71235628 None:intergenic 35.0%
TATTAGTGAACCATCCATTG+CGG - chr8.4:71237560-71237579 MS.gene81071:intron 35.0%
TCAGCATGTTTCATGTAGAA+AGG + chr8.4:71236707-71236726 None:intergenic 35.0%
TCCTCTTCAATGGTTTCAAA+TGG + chr8.4:71236910-71236929 None:intergenic 35.0%
TCGTTGAAAATGGTCTACTA+TGG - chr8.4:71236994-71237013 MS.gene81071:intron 35.0%
TGGAAAGGATCGAAAGATTA+AGG - chr8.4:71235849-71235868 MS.gene81071:intron 35.0%
TGTATGCAAGTATGAACCTT+GGG - chr8.4:71235617-71235636 MS.gene81071:CDS 35.0%
TTGAAGGAATTCCTGATGTA+AGG - chr8.4:71236618-71236637 MS.gene81071:CDS 35.0%
TTTCTTGAACATCCTAGTTC+AGG - chr8.4:71237848-71237867 MS.gene81071:CDS 35.0%
! AGTACCTTTCGAGATGATTT+TGG - chr8.4:71237974-71237993 MS.gene81071:intron 35.0%
! CATTTTCAGAGATTGAAGGA+AGG + chr8.4:71236813-71236832 None:intergenic 35.0%
! CTAAAATAGGCATCGTGAAT+TGG + chr8.4:71236862-71236881 None:intergenic 35.0%
! GTACCTTTCGAGATGATTTT+GGG - chr8.4:71237975-71237994 MS.gene81071:intron 35.0%
! TACCTTTCGAGATGATTTTG+GGG - chr8.4:71237976-71237995 MS.gene81071:intron 35.0%
! TCCATTTGAAACCATTGAAG+AGG - chr8.4:71236906-71236925 MS.gene81071:intron 35.0%
! TGCTCATTTTCAGAGATTGA+AGG + chr8.4:71236817-71236836 None:intergenic 35.0%
! TGGATCATCTGATTTTACCA+CGG + chr8.4:71235740-71235759 None:intergenic 35.0%
! TTCAATCTCTGAAAATGAGC+AGG - chr8.4:71236816-71236835 MS.gene81071:CDS 35.0%
!! AATGGTTTTTGGAAAGCTAC+TGG - chr8.4:71235829-71235848 MS.gene81071:intron 35.0%
!! ACTAAAAGAGTGACTTGGTA+AGG + chr8.4:71236331-71236350 None:intergenic 35.0%
!! TCACGATGCCTATTTTAGAA+AGG - chr8.4:71236864-71236883 MS.gene81071:CDS 35.0%
!! TTGCGTTTTCTTATAGTGGA+AGG + chr8.4:71238079-71238098 None:intergenic 35.0%
!! TTTTTGGAAAGCTACTGGAA+AGG - chr8.4:71235834-71235853 MS.gene81071:intron 35.0%
!!! CGCATTAGTTTGTTTTGTCT+TGG - chr8.4:71236408-71236427 MS.gene81071:intron 35.0%
AACCTTGTCATCTTCAAAGG+TGG + chr8.4:71235980-71235999 None:intergenic 40.0%
AAGGATGAACTCCTTACATC+AGG + chr8.4:71236632-71236651 None:intergenic 40.0%
ATCTGAATCCAACAGGAACA+TGG + chr8.4:71235503-71235522 None:intergenic 40.0%
ATCTGCAGTTGAATCACAAG+AGG + chr8.4:71238014-71238033 None:intergenic 40.0%
CATCGTGAATTGGAGAGTTT+GGG + chr8.4:71237309-71237328 None:intergenic 40.0%
CTTACAAGCTCTTCATCTGT+TGG + chr8.4:71235531-71235550 None:intergenic 40.0%
GGAATCAATATTTCAGGCAC+AGG - chr8.4:71236777-71236796 MS.gene81071:CDS 40.0%
GGACACAAGAAAAACCATTC+TGG + chr8.4:71235760-71235779 None:intergenic 40.0%
TGTAAGGAGTTCCTGATGTA+AGG - chr8.4:71237075-71237094 MS.gene81071:CDS 40.0%
! ACCTTTCGAGATGATTTTGG+GGG - chr8.4:71237977-71237996 MS.gene81071:intron 40.0%
! AGCTCTTTTCGACATGAAGA+TGG + chr8.4:71238125-71238144 None:intergenic 40.0%
! CACCAAGCATTGCTAAAATG+TGG + chr8.4:71237600-71237619 None:intergenic 40.0%
! GTAGACCATTTTCAACGACT+CGG + chr8.4:71236992-71237011 None:intergenic 40.0%
! TACCACCTTTGAAGATGACA+AGG - chr8.4:71235975-71235994 MS.gene81071:intron 40.0%
! TCGAAAAGAGCTGCTTTAAG+AGG - chr8.4:71238133-71238152 MS.gene81071:CDS 40.0%
! TTTTTACCTGGTAACTCCCA+AGG + chr8.4:71235636-71235655 None:intergenic 40.0%
!! AGATGATTTTGGGGGATTAG+AGG - chr8.4:71237985-71238004 MS.gene81071:CDS 40.0%
!! GACCACATTTTAGCAATGCT+TGG - chr8.4:71237595-71237614 MS.gene81071:intron 40.0%
!!! ATCTTTTTCAGCTTGTTCCG+TGG - chr8.4:71235720-71235739 MS.gene81071:CDS 40.0%
ACAGGAACATGGTCAAGAGT+CGG + chr8.4:71235492-71235511 None:intergenic 45.0%
ACTCTTGACCATGTTCCTGT+TGG - chr8.4:71235492-71235511 MS.gene81071:CDS 45.0%
CAAGCTCTTCATCTGTTGGT+CGG + chr8.4:71235527-71235546 None:intergenic 45.0%
CATCAGGAACTCCTTACATC+AGG + chr8.4:71237073-71237092 None:intergenic 45.0%
CATCGTGAATTGGCGAGTTT+GGG + chr8.4:71236852-71236871 None:intergenic 45.0%
GATAGAAAACAGGTGCTTCC+AGG + chr8.4:71237920-71237939 None:intergenic 45.0%
GCATCGTGAATTGGAGAGTT+TGG + chr8.4:71237310-71237329 None:intergenic 45.0%
GTCAAGAGTCGGAGGAAATA+AGG + chr8.4:71235481-71235500 None:intergenic 45.0%
GTGAATTGGAGAGTTTGGGA+TGG + chr8.4:71237305-71237324 None:intergenic 45.0%
TACTATAGTGGTCGTGTTCC+TGG - chr8.4:71235916-71235935 MS.gene81071:intron 45.0%
TATGAACCTTGGGAGTTACC+AGG - chr8.4:71235627-71235646 MS.gene81071:CDS 45.0%
TCAAACTCATGTCACCGCAA+TGG + chr8.4:71237577-71237596 None:intergenic 45.0%
TCCCCCAAAATCATCTCGAA+AGG + chr8.4:71237981-71238000 None:intergenic 45.0%
TCGGAACTCATGTGTCTACT+TGG + chr8.4:71236578-71236597 None:intergenic 45.0%
TGCTGAAGTAGTCTCTATGC+CGG - chr8.4:71237032-71237051 MS.gene81071:CDS 45.0%
! CTTTTCGACATGAAGATGGC+TGG + chr8.4:71238121-71238140 None:intergenic 45.0%
ACTCATGTCACCGCAATGGA+TGG + chr8.4:71237573-71237592 None:intergenic 50.0%
CCAGTCCGAGTCGTTGAAAA+TGG - chr8.4:71236984-71237003 MS.gene81071:intron 50.0%
GCATCGTGAATTGGCGAGTT+TGG + chr8.4:71236853-71236872 None:intergenic 50.0%
GGTCGGAATCTGAATCCAAC+AGG + chr8.4:71235510-71235529 None:intergenic 50.0%
GTGAATTGGCGAGTTTGGGA+TGG + chr8.4:71236848-71236867 None:intergenic 50.0%
TGCTGAAGTAGTCTCTACGC+CGG - chr8.4:71237489-71237508 MS.gene81071:intron 50.0%
! GCAGAGTATTCGCCTGAACT+AGG + chr8.4:71237863-71237882 None:intergenic 50.0%
! TCAACGCGTGGTAATGTTCC+TGG - chr8.4:71237899-71237918 MS.gene81071:intron 50.0%
! TCCTGGTGTTAACAGCAGCT+GGG - chr8.4:71235933-71235952 MS.gene81071:intron 50.0%
! TTCCTGGTGTTAACAGCAGC+TGG - chr8.4:71235932-71235951 MS.gene81071:intron 50.0%
!! CCATTTTCAACGACTCGGAC+TGG + chr8.4:71236987-71237006 None:intergenic 50.0%
!! GACATGAAGATGGCTGGTCT+TGG + chr8.4:71238115-71238134 None:intergenic 50.0%
!! TGGCTGGTCTTGGATGATAC+TGG + chr8.4:71238105-71238124 None:intergenic 50.0%
ACCCAGCTGCTGTTAACACC+AGG + chr8.4:71235937-71235956 None:intergenic 55.0%
GGAACATGGTCAAGAGTCGG+AGG + chr8.4:71235489-71235508 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 71235471 71238162 71235471 ID=MS.gene81071
chr8.4 mRNA 71235471 71238162 71235471 ID=MS.gene81071.t1;Parent=MS.gene81071
chr8.4 exon 71237985 71238162 71237985 ID=MS.gene81071.t1.exon1;Parent=MS.gene81071.t1
chr8.4 CDS 71237985 71238162 71237985 ID=cds.MS.gene81071.t1;Parent=MS.gene81071.t1
chr8.4 exon 71237637 71237902 71237637 ID=MS.gene81071.t1.exon2;Parent=MS.gene81071.t1
chr8.4 CDS 71237637 71237902 71237637 ID=cds.MS.gene81071.t1;Parent=MS.gene81071.t1
chr8.4 exon 71236999 71237145 71236999 ID=MS.gene81071.t1.exon3;Parent=MS.gene81071.t1
chr8.4 CDS 71236999 71237145 71236999 ID=cds.MS.gene81071.t1;Parent=MS.gene81071.t1
chr8.4 exon 71236580 71236885 71236580 ID=MS.gene81071.t1.exon4;Parent=MS.gene81071.t1
chr8.4 CDS 71236580 71236885 71236580 ID=cds.MS.gene81071.t1;Parent=MS.gene81071.t1
chr8.4 exon 71235471 71235815 71235471 ID=MS.gene81071.t1.exon5;Parent=MS.gene81071.t1
chr8.4 CDS 71235471 71235815 71235471 ID=cds.MS.gene81071.t1;Parent=MS.gene81071.t1
Gene Sequence

>MS.gene81071

ATGACAACCTTATTTCCTCCGACTCTTGACCATGTTCCTGTTGGATTCAGATTCCGACCAACAGATGAAGAGCTTGTAAGCCACTATCTCAAAAACAAGTTACTTGATAACGATTCCATTGTCAACAATGTTATACCTGAAGTTGATGTATGCAAGTATGAACCTTGGGAGTTACCAGGTAAAAAAAAAACAAACAAACAAACCCCATCATTATTTTCTCATAAAAATGCAACCTTTTTAATGTTTTTCATCTTTTTCAGCTTGTTCCGTGGTAAAATCAGATGATCCAGAATGGTTTTTCTTGTGTCCTATTGATTATAAGTATGCAAAGAGCAAGAGGTTTAAAAGGACAACTAATAATGGTTTTTGGAAAGCTACTGGAAAGGATCGAAAGATTAAGGTTAGGGGTAGCAATAATATTATTGGGATTAAGAAGACTCTTGTTTACTATAGTGGTCGTGTTCCTGGTGTTAACAGCAGCTGGGTGATTCATGAATATCATGATACCACCTTTGAAGATGACAAGGTTTGTTTTGTTACAATAAAGGTTTTAAATGACTTTATTTGAGTTATTATTTATTTATTTAAATGAGTATGACAAAACATGAGTTTATTCAGGATTTACTATTTTCCTATATATGATTGGCTGTTCTGAAATTTGATGTTTATTGAATTAATTGTTTGAAAGTTTGAACTTTGAACCCTTTTTTCTTTTGGTATCATATTTGTTAGAGGAACAACTAGTAATAGCAGATTAAAGAAAACACAAATCACAAACAATGGAATATGACCTTTTAATTACAAAGACAGTGTTTGAGATAAAGTTTTTTGTTGAAATGTTATTTTGCTGTATGACACCTTACCAAGTCACTCTTTTAGTCTTTTTCAGTTTTTGAATGTTAATAGGACTGTTCAAGAAACTAGTTTATGATTTTGACGCATTAGTTTGTTTTGTCTTGGTATCTATTTGTATAAATTGCATAAAATAAATGCTGATTATCATCCGAAATTTTGTAGCGGACTTTTGTTTTATGTCGCTTGATGAAGAAAGCTGAGAAAAAAGCTGAAAAGGAAGCTGATGCATATATATGTGATGAAGGGGAGCCAAGTAGACACATGAGTTCCGACCATGAAAATAAAGAAACTTTTGAAGGAATTCCTGATGTAAGGAGTTCATCCTTGATAAATGATAATAGAAATTTTGCGAACAAAGTTTTGGCTTTAAAGTTTAAACCTTTCTACATGAAACATGCTGAGAACTTATATTTGTTTTATAGGTGGGTGATACTTTGCCAGAAATAAATATGGAATCAATATTTCAGGCACAGGCAGAAAAATACCTTCCTTCAATCTCTGAAAATGAGCAGGAAGTATCCATCCCAAACTCGCCAATTCACGATGCCTATTTTAGAAATGACAACATCATTGTTCAGAGTCCATTTGAAACCATTGAAGAGGAAGATAAGTTCGTCAGTTCAATGATTATTGACGGGGATTTGGACAACGCTCATGTCCAGTCCGAGTCGTTGAAAATGGTCTACTATGGAAGCAGTGACACAGATGCTGAAGTAGTCTCTATGCCGGTAAATATATATTGTTCCTGATGTAAGGAGTTCCTGATGTAAGGAGTTCATCCTTGATAAATGATAATAGAAATTTTGCCAACAAAGTTTTGGCTTTAAAGTTTAAACCTTTCTACATGAAACATGCTGAGAACTTATATTTGTTTTATAGGTGGGTGATACTTTGCCAGAAATAAATATGGAATCAATATTTCAGGCACAGGCAGAAAAATACCTTCCTTCAATCTCTGAAAATGAGCAGGAAGTATCCATCCCAAACTCTCCAATTCACGATGCCTATTTTAGAAAGGACAACATCATTCTTCAGAGTCCATTTGAAACCATTGAAGAGGAAGATAAGTTCGTCAGTTCAATGATTATTGACGGGGATTTGGACAACGCTCATGTCCAGTCCGAGTCGTTGAAAATGGTCTACTATGGAAGCAGTGACACAGATGCTGAAGTAGTCTCTACGCCGGTAAATATATATTGTTCAAAGACCAAATGATATGAAAGTGTGTATCTCTTATTAGTGAACCATCCATTGCGGTGACATGAGTTTGACCACATTTTAGCAATGCTTGGTGATTTTCTTTTATAAATTGTGAAAAAGTACTTGGATGAAATGAAATGTCTAGGTTGAGTTAGTTTTGATGCTTTTCTTTAATAGATTCAGAAGTTTTTTTTTTCTTCTCTTTATACTGCATGTTGCTGTTATTCTCTTCCTTTTGAAATGCTACTAGAATGACCTTTCATAATGCTTATTTTCTTCTACAATTTTACAGTGTGGCGATATTCTTGATACTTCAATGGCATTTCTTGAACATCCTAGTTCAGGCGAATACTCTGCATCAAAATTGTTGAAATCAACGCGTGGTAATGTTCCTGGAAGCACCTGTTTTCTATCTTTAAAGAATGGTGAAATCGAAGACAACAACGAGAGTACCTTTCGAGATGATTTTGGGGGATTAGAGGCATCCTCTTGTGATTCAACTGCAGATATATCTTTGGAGACGATCAATTGTATTGAAATTTCTAGTTTACCTTCCACTATAAGAAAACGCAAAAACCAGTATCATCCAAGACCAGCCATCTTCATGTCGAAAAGAGCTGCTTTAAGAGGATCTTGA
Protein sequence

>MS.gene81071.t1

MTTLFPPTLDHVPVGFRFRPTDEELVSHYLKNKLLDNDSIVNNVIPEVDVCKYEPWELPACSVVKSDDPEWFFLCPIDYKYAKSKRFKRTTNNGFWKATGKDRKIKVRGSNNIIGIKKTLVYYSGRVPGVNSSWVIHEYHDTTFEDDKRTFVLCRLMKKAEKKAEKEADAYICDEGEPSRHMSSDHENKETFEGIPDVGDTLPEINMESIFQAQAEKYLPSISENEQEVSIPNSPIHDAYFRNDNIIVQSPFETIEEEDKFVSSMIIDGDLDNAHVQSESLKMVYYGSSDTDAEVVSMPCGDILDTSMAFLEHPSSGEYSASKLLKSTRGNVPGSTCFLSLKNGEIEDNNESTFRDDFGGLEASSCDSTADISLETINCIEISSLPSTIRKRKNQYHPRPAIFMSKRAALRGS