Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81251.t1 | XP_003617930.1 | 98.8 | 424 | 5 | 0 | 1 | 424 | 57 | 480 | 3.60E-245 | 857.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81251.t1 | Q9FKH1 | 46.6 | 427 | 206 | 7 | 2 | 421 | 32 | 443 | 2.8e-97 | 357.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81251.t1 | G7KEL4 | 98.8 | 424 | 5 | 0 | 1 | 424 | 57 | 480 | 2.6e-245 | 857.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene81251.t1 | TF | SAP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81251.t1 | MTR_5g097060 | 98.821 | 424 | 5 | 0 | 1 | 424 | 57 | 480 | 0.0 | 854 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81251.t1 | AT5G35770 | 46.370 | 427 | 207 | 7 | 2 | 421 | 32 | 443 | 1.53e-112 | 338 |
Find 133 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACTCTTCTATACATTTAT+TGG | 0.108359 | 5.2:+81391385 | MS.gene81251:CDS |
| TTATTAGGGTGCATGAATTT+AGG | 0.164199 | 5.2:+81391197 | MS.gene81251:CDS |
| TCATGGTTAAGAGGTTTATT+AGG | 0.167477 | 5.2:+81391182 | MS.gene81251:CDS |
| GTTTACATTGCTATTATTAA+TGG | 0.176388 | 5.2:+81390675 | MS.gene81251:CDS |
| TGCCATCCTTGAACCGTTTC+CGG | 0.223972 | 5.2:-81390894 | None:intergenic |
| GCGTGAGTAGGTTTAGATTA+AGG | 0.227131 | 5.2:+81391156 | MS.gene81251:CDS |
| GGTCTGGTTTGTTGAGAGTA+TGG | 0.250834 | 5.2:+81391243 | MS.gene81251:CDS |
| CCTGCACGACGGGCAATTAA+TGG | 0.265227 | 5.2:+81390723 | MS.gene81251:CDS |
| CCTTCTCCATCATCTCTAAC+TGG | 0.275457 | 5.2:-81391305 | None:intergenic |
| GGGTATGTTATAACATATTC+TGG | 0.276633 | 5.2:+81391218 | MS.gene81251:CDS |
| TCCGTTTCGGGAATTGTAAT+TGG | 0.284357 | 5.2:+81390615 | MS.gene81251:CDS |
| TATTAGGGTGCATGAATTTA+GGG | 0.289123 | 5.2:+81391198 | MS.gene81251:CDS |
| GTGCACATGTTAGCACATTT+TGG | 0.290721 | 5.2:+81390556 | MS.gene81251:CDS |
| CGTGAGTAGGTTTAGATTAA+GGG | 0.323549 | 5.2:+81391157 | MS.gene81251:CDS |
| CATGGTTAAGAGGTTTATTA+GGG | 0.328702 | 5.2:+81391183 | MS.gene81251:CDS |
| CTCGCCTTCGCGAGATTAGA+TGG | 0.334905 | 5.2:+81390648 | MS.gene81251:CDS |
| TTTACATTGCTATTATTAAT+GGG | 0.338881 | 5.2:+81390676 | MS.gene81251:CDS |
| GCAGGAATGGGCCCGGGTAT+TGG | 0.339605 | 5.2:-81390705 | None:intergenic |
| TCCAACCATGGTCTTCTATT+CGG | 0.353047 | 5.2:+81390579 | MS.gene81251:CDS |
| ATAACATATTCTGGTGGGTC+TGG | 0.372539 | 5.2:+81391227 | MS.gene81251:CDS |
| GGCAGCGGCAGATGAGGTTT+TGG | 0.378783 | 5.2:-81390461 | None:intergenic |
| TATATGCTGGCCATGCGGGC+GGG | 0.383931 | 5.2:+81390808 | MS.gene81251:CDS |
| AGCTACTACATATTCTCTTT+CGG | 0.384245 | 5.2:-81390961 | None:intergenic |
| ACGGAACAGCGCGTGTTTGT+TGG | 0.386206 | 5.2:+81390855 | MS.gene81251:CDS |
| AGGATTCATTGTAGGATCAT+TGG | 0.389444 | 5.2:+81391058 | MS.gene81251:CDS |
| CGTGATGTAGTGTCCATAAC+AGG | 0.395954 | 5.2:+81391038 | MS.gene81251:CDS |
| GGTTTAGATTAAGGGCTTCA+TGG | 0.398867 | 5.2:+81391165 | MS.gene81251:CDS |
| TTCATTAACCGATCCGGAAA+CGG | 0.410471 | 5.2:+81390881 | MS.gene81251:CDS |
| CACCGGGAGACATGCTTTAG+TGG | 0.414725 | 5.2:+81390410 | MS.gene81251:CDS |
| CCCGAAACGGATTGTGAAAA+CGG | 0.417479 | 5.2:-81390603 | None:intergenic |
| ACATCACGTAATAGAACCTC+TGG | 0.422231 | 5.2:-81391023 | None:intergenic |
| AGCTTGCACAAGTACAAGAT+TGG | 0.422430 | 5.2:+81390980 | MS.gene81251:CDS |
| ATATGCTGGCCATGCGGGCG+GGG | 0.423497 | 5.2:+81390809 | MS.gene81251:CDS |
| ACCGACCGGTTCAACTAATT+CGG | 0.424968 | 5.2:-81390925 | None:intergenic |
| AGAGGCTCACGAGACGCATC+TGG | 0.428365 | 5.2:+81390313 | MS.gene81251:CDS |
| GTAGCCAATGCTTCAACAAC+AGG | 0.432980 | 5.2:-81386538 | None:intergenic |
| TCCAATTACAATTCCCGAAA+CGG | 0.436742 | 5.2:-81390616 | None:intergenic |
| CGGGCCCATTCCTGCACGAC+GGG | 0.438206 | 5.2:+81390713 | MS.gene81251:CDS |
| GGCTCTAGTCGTTGGTGGGT+TGG | 0.439072 | 5.2:+81390783 | MS.gene81251:CDS |
| TCCTACAATGAATCCTGTTA+TGG | 0.441153 | 5.2:-81391051 | None:intergenic |
| TCTCCCGGTGGTAAAGTTCC+TGG | 0.441224 | 5.2:-81390397 | None:intergenic |
| TCCTTGAACCGTTTCCGGAT+CGG | 0.441558 | 5.2:-81390889 | None:intergenic |
| CCATTAATTGCCCGTCGTGC+AGG | 0.443293 | 5.2:-81390723 | None:intergenic |
| TTAAGGGCTTCATGGTTAAG+AGG | 0.447013 | 5.2:+81391173 | MS.gene81251:CDS |
| AATTGCCCGTCGTGCAGGAA+TGG | 0.458917 | 5.2:-81390718 | None:intergenic |
| ATTGCCCGTCGTGCAGGAAT+GGG | 0.459648 | 5.2:-81390717 | None:intergenic |
| ACCGATCCGGAAACGGTTCA+AGG | 0.460400 | 5.2:+81390888 | MS.gene81251:CDS |
| CCGTCGTGCAGGAATGGGCC+CGG | 0.461152 | 5.2:-81390712 | None:intergenic |
| ATGGGCCCGGGTATTGGTCC+AGG | 0.465999 | 5.2:-81390699 | None:intergenic |
| ATTGCTATTATTAATGGGCC+TGG | 0.468535 | 5.2:+81390681 | MS.gene81251:CDS |
| GGTTTATATGCTGGCCATGC+GGG | 0.468935 | 5.2:+81390804 | MS.gene81251:CDS |
| TGGTGGGTTGGTTTATATGC+TGG | 0.470180 | 5.2:+81390795 | MS.gene81251:CDS |
| TGAACCTGTTGTTGAAGCAT+TGG | 0.473412 | 5.2:+81386534 | MS.gene81251:CDS |
| GTTAACCGAATTAGTTGAAC+CGG | 0.476077 | 5.2:+81390920 | MS.gene81251:CDS |
| ATTGATGCTTCTCATTATCA+TGG | 0.480019 | 5.2:+81386571 | MS.gene81251:CDS |
| TTGCCGGCTCTAGTCGTTGG+TGG | 0.480637 | 5.2:+81390778 | MS.gene81251:CDS |
| CATATTCTCTTTCGGTGACT+CGG | 0.481267 | 5.2:-81390953 | None:intergenic |
| TGCCGGCTCTAGTCGTTGGT+GGG | 0.484033 | 5.2:+81390779 | MS.gene81251:CDS |
| ATGATAATGAGAAGCATCAA+TGG | 0.484575 | 5.2:-81386569 | None:intergenic |
| CGACGAAGCCGCAGGCGAGG+TGG | 0.487527 | 5.2:-81390500 | None:intergenic |
| GGAGTATTAGTAGAATTTGC+CGG | 0.489467 | 5.2:+81390762 | MS.gene81251:CDS |
| ACGCTCCCAGTTAGAGATGA+TGG | 0.491914 | 5.2:+81391299 | MS.gene81251:CDS |
| ATCTAATCTCGCGAAGGCGA+GGG | 0.494316 | 5.2:-81390646 | None:intergenic |
| TCAAATATGGGACGCGCACA+CGG | 0.496233 | 5.2:+81390836 | MS.gene81251:CDS |
| CCGAAACGGATTGTGAAAAC+GGG | 0.497568 | 5.2:-81390602 | None:intergenic |
| TGGCGGTTCATTAACCGATC+CGG | 0.497586 | 5.2:+81390875 | MS.gene81251:CDS |
| CATCTAATCTCGCGAAGGCG+AGG | 0.498179 | 5.2:-81390647 | None:intergenic |
| TGATCTCCTGGATCATATTG+TGG | 0.499584 | 5.2:-81390435 | None:intergenic |
| AACGTGCTATGAATGAAGTA+TGG | 0.501621 | 5.2:+81386509 | None:intergenic |
| TTATATGCTGGCCATGCGGG+CGG | 0.503776 | 5.2:+81390807 | MS.gene81251:CDS |
| GAACAGCGCGTGTTTGTTGG+CGG | 0.505393 | 5.2:+81390858 | MS.gene81251:CDS |
| TGTCGGAGAGAGTGAGGCAG+CGG | 0.506671 | 5.2:-81390476 | None:intergenic |
| AATGGTGATGTTGTCAATAA+CGG | 0.506851 | 5.2:+81390741 | MS.gene81251:CDS |
| TCCATAACAGGATTCATTGT+AGG | 0.509536 | 5.2:+81391050 | MS.gene81251:CDS |
| CTTCTCCATCATCTCTAACT+GGG | 0.510502 | 5.2:-81391304 | None:intergenic |
| AACCCACCAACGACTAGAGC+CGG | 0.516179 | 5.2:-81390781 | None:intergenic |
| CTCGCCTGCGGCTTCGTCGA+CGG | 0.523192 | 5.2:+81390504 | MS.gene81251:CDS |
| GTCTGGTTTGTTGAGAGTAT+GGG | 0.524284 | 5.2:+81391244 | MS.gene81251:CDS |
| GAGTGAGGCAGCGGCAGATG+AGG | 0.527259 | 5.2:-81390467 | None:intergenic |
| GTTCGGATCTACTGTGGCAG+AGG | 0.528047 | 5.2:+81390295 | MS.gene81251:CDS |
| GACGAAGCCGCAGGCGAGGT+GGG | 0.529764 | 5.2:-81390499 | None:intergenic |
| GGCGCAGAACATATAGATTG+AGG | 0.532902 | 5.2:+81390334 | MS.gene81251:CDS |
| GGCAGTTAGAATACATCTAC+TGG | 0.534095 | 5.2:+81390364 | MS.gene81251:CDS |
| GTGGTCCCACAATATGATCC+AGG | 0.534362 | 5.2:+81390429 | MS.gene81251:CDS |
| GCCGCAGGCGAGGTGGGTGT+CGG | 0.536831 | 5.2:-81390493 | None:intergenic |
| GTGATACACAATCGCGCCGC+AGG | 0.537724 | 5.2:-81391278 | None:intergenic |
| ATGGAGAGAAGTGTCACGTT+CGG | 0.540623 | 5.2:+81390278 | MS.gene81251:CDS |
| GCGCAGAACATATAGATTGA+GGG | 0.543876 | 5.2:+81390335 | MS.gene81251:CDS |
| GATCTCCTGGATCATATTGT+GGG | 0.544786 | 5.2:-81390434 | None:intergenic |
| CGTCGTGCAGGAATGGGCCC+GGG | 0.546050 | 5.2:-81390711 | None:intergenic |
| AATTTGCCGGCTCTAGTCGT+TGG | 0.546832 | 5.2:+81390775 | MS.gene81251:CDS |
| GTGGTGGAAAGAAGTGGTGT+TGG | 0.551066 | 5.2:+81391104 | MS.gene81251:CDS |
| ATGTTATAACATATTCTGGT+GGG | 0.553968 | 5.2:+81391222 | MS.gene81251:CDS |
| AATGGGCCTGGACCAATACC+CGG | 0.556865 | 5.2:+81390693 | MS.gene81251:CDS |
| GCCGAATAGAAGACCATGGT+TGG | 0.558339 | 5.2:-81390580 | None:intergenic |
| TCTACTGGCATCGAACGGCC+AGG | 0.565427 | 5.2:+81390379 | MS.gene81251:CDS |
| TTTGTTGTGGTGGAAAGAAG+TGG | 0.565574 | 5.2:+81391098 | MS.gene81251:CDS |
| TTTGAAAAGCCCCGCCCGCA+TGG | 0.566257 | 5.2:-81390818 | None:intergenic |
| GAAGTGGTGTTGGAACTGTT+CGG | 0.568741 | 5.2:+81391114 | MS.gene81251:CDS |
| GGTGGGTGTCGGAGAGAGTG+AGG | 0.568818 | 5.2:-81390482 | None:intergenic |
| CGTCGACGAAGCCGCAGGCG+AGG | 0.570217 | 5.2:-81390503 | None:intergenic |
| ATGGGCCTGGACCAATACCC+GGG | 0.577553 | 5.2:+81390694 | MS.gene81251:CDS |
| GTGACTCGGACTCGACCGAC+CGG | 0.586956 | 5.2:-81390939 | None:intergenic |
| ATCCGGAAACGGTTCAAGGA+TGG | 0.588593 | 5.2:+81390892 | MS.gene81251:CDS |
| GACCACTAAAGCATGTCTCC+CGG | 0.592351 | 5.2:-81390412 | None:intergenic |
| GCATGCAGGTTTGTTCAACA+TGG | 0.597878 | 5.2:+81390259 | MS.gene81251:intron |
| TGGTTTATATGCTGGCCATG+CGG | 0.599044 | 5.2:+81390803 | MS.gene81251:CDS |
| ACTGCCGTCGACGAAGCCGC+AGG | 0.600288 | 5.2:-81390508 | None:intergenic |
| ACGGCCAGGAACTTTACCAC+CGG | 0.601863 | 5.2:+81390393 | MS.gene81251:CDS |
| ATAATTTCGAGCGCGTGAGT+AGG | 0.604680 | 5.2:+81391144 | MS.gene81251:CDS |
| CGGCCAGGAACTTTACCACC+GGG | 0.607000 | 5.2:+81390394 | MS.gene81251:CDS |
| CCAGTTAGAGATGATGGAGA+AGG | 0.611674 | 5.2:+81391305 | MS.gene81251:CDS |
| GATGGAGAAGGACAAGTACA+TGG | 0.613846 | 5.2:+81391317 | MS.gene81251:CDS |
| TCCGACACCCACCTCGCCTG+CGG | 0.615146 | 5.2:+81390492 | MS.gene81251:CDS |
| ATCTCCATCTAATCTCGCGA+AGG | 0.620003 | 5.2:-81390652 | None:intergenic |
| TATGTTATAACATATTCTGG+TGG | 0.621514 | 5.2:+81391221 | MS.gene81251:CDS |
| ATCATTGGATGTTAGCCATG+AGG | 0.625954 | 5.2:+81391073 | MS.gene81251:CDS |
| TGCTAACATGTGCACCGGTG+TGG | 0.634853 | 5.2:-81390548 | None:intergenic |
| ACAAGTACATGGCAATAGCA+TGG | 0.638195 | 5.2:+81391328 | MS.gene81251:CDS |
| CATATAGATTGAGGGACACG+TGG | 0.643287 | 5.2:+81390343 | MS.gene81251:CDS |
| CGGTGTGGAGATCGAAGAGT+CGG | 0.650728 | 5.2:-81390533 | None:intergenic |
| CCGGGCCCATTCCTGCACGA+CGG | 0.655323 | 5.2:+81390712 | MS.gene81251:CDS |
| AAATGTGCTAACATGTGCAC+CGG | 0.656474 | 5.2:-81390553 | None:intergenic |
| ATACATCTACTGGCATCGAA+CGG | 0.658565 | 5.2:+81390374 | MS.gene81251:CDS |
| CATCACGTAATAGAACCTCT+GGG | 0.662087 | 5.2:-81391022 | None:intergenic |
| CGACTCTTCGATCTCCACAC+CGG | 0.677791 | 5.2:+81390534 | MS.gene81251:CDS |
| ACCGAATTAGTTGAACCGGT+CGG | 0.683053 | 5.2:+81390924 | MS.gene81251:CDS |
| TGTCACGTTCGGATCTACTG+TGG | 0.685634 | 5.2:+81390289 | MS.gene81251:CDS |
| TTTCAACTTAAGAAACCCAG+AGG | 0.687724 | 5.2:+81391007 | MS.gene81251:CDS |
| ATGGGACATACATGAACCTG+CGG | 0.688958 | 5.2:+81391262 | MS.gene81251:CDS |
| CACTAAAGCATGTCTCCCGG+TGG | 0.706707 | 5.2:-81390409 | None:intergenic |
| GGTTGCTAATCAAACTCACG+TGG | 0.706916 | 5.2:+81391349 | MS.gene81251:CDS |
| ACGGGCCGAATAGAAGACCA+TGG | 0.711737 | 5.2:-81390584 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGTTAATATAATCAAAT+AGG | + | chr5.2:81386696-81386715 | MS.gene81251:intron | 10.0% |
| !!! | AAACCTATTTTAAAATTAAA+TGG | - | chr5.2:81388725-81388744 | None:intergenic | 10.0% |
| !!! | AATAATACAAGAAATATTTT+AGG | + | chr5.2:81388114-81388133 | MS.gene81251:intron | 10.0% |
| !!! | AGAGTATTATAATTATATAA+TGG | + | chr5.2:81388532-81388551 | MS.gene81251:intron | 10.0% |
| !!! | TCTTATTATTTTTACATAAA+GGG | - | chr5.2:81386906-81386925 | None:intergenic | 10.0% |
| !!! | TGAATTTTATTTTTTTTTGA+AGG | + | chr5.2:81387943-81387962 | MS.gene81251:intron | 10.0% |
| !!! | TTCTTATTATTTTTACATAA+AGG | - | chr5.2:81386907-81386926 | None:intergenic | 10.0% |
| !! | AATGAAATATTAGTAAAACA+TGG | - | chr5.2:81389478-81389497 | None:intergenic | 15.0% |
| !! | AATTATATAATGGCATAAAA+TGG | + | chr5.2:81388542-81388561 | MS.gene81251:intron | 15.0% |
| !! | ATAAAATTTATGATATGATG+TGG | - | chr5.2:81389598-81389617 | None:intergenic | 15.0% |
| !! | ATCATACTATTTAATGTATT+GGG | - | chr5.2:81388678-81388697 | None:intergenic | 15.0% |
| !! | TATAATACCAAATGAAAAAA+AGG | - | chr5.2:81387223-81387242 | None:intergenic | 15.0% |
| !! | TATCATACTATTTAATGTAT+TGG | - | chr5.2:81388679-81388698 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5.2:81389746-81389765 | None:intergenic | 15.0% |
| !! | TTACAAAAAAAATGTGTATT+TGG | - | chr5.2:81388442-81388461 | None:intergenic | 15.0% |
| !! | TTATACACAATATATTTACA+TGG | + | chr5.2:81389147-81389166 | MS.gene81251:intron | 15.0% |
| !!! | ATTAATATTACTTGTTAGTA+AGG | - | chr5.2:81388937-81388956 | None:intergenic | 15.0% |
| !!! | GACACTTTTTTTTAAAAAAT+GGG | - | chr5.2:81389676-81389695 | None:intergenic | 15.0% |
| !!! | GATCCATTTAATTTTAAAAT+AGG | + | chr5.2:81388719-81388738 | MS.gene81251:intron | 15.0% |
| !!! | GTCAATTTTCTATTTAATTT+TGG | + | chr5.2:81390064-81390083 | MS.gene81251:intron | 15.0% |
| !!! | TTAGTTTCTAAAAACATTTA+AGG | + | chr5.2:81387909-81387928 | MS.gene81251:intron | 15.0% |
| !!! | TTCACTCAATTTTTTTTTTA+GGG | - | chr5.2:81388238-81388257 | None:intergenic | 15.0% |
| !!! | TTTACATTGCTATTATTAAT+GGG | + | chr5.2:81390676-81390695 | MS.gene81251:CDS | 15.0% |
| !!! | TTTCACTCAATTTTTTTTTT+AGG | - | chr5.2:81388239-81388258 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTGCATGATAT+GGG | + | chr5.2:81390209-81390228 | MS.gene81251:intron | 15.0% |
| !!! | TTTTTTTTTTTTGCATGATA+TGG | + | chr5.2:81390208-81390227 | MS.gene81251:intron | 15.0% |
| !! | AAAATACTGTTCCTTAAAAA+CGG | + | chr5.2:81387105-81387124 | MS.gene81251:intron | 20.0% |
| !! | AAATGAAAGTGAAATATATG+TGG | + | chr5.2:81389419-81389438 | MS.gene81251:intron | 20.0% |
| !! | AATGAAAGTGAAATATATGT+GGG | + | chr5.2:81389420-81389439 | MS.gene81251:intron | 20.0% |
| !! | ACAAAATAATTCTTCATTGT+TGG | - | chr5.2:81386747-81386766 | None:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr5.2:81389713-81389732 | None:intergenic | 20.0% |
| !! | ATAATAATATGAAACCAAAC+CGG | - | chr5.2:81387592-81387611 | None:intergenic | 20.0% |
| !! | ATTTCTACGAATATAATCTT+AGG | - | chr5.2:81387685-81387704 | None:intergenic | 20.0% |
| !! | CATTTGGTATTATATGAAAA+AGG | + | chr5.2:81387229-81387248 | MS.gene81251:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | - | chr5.2:81389712-81389731 | None:intergenic | 20.0% |
| !! | TATCTAATCTAATAAATCCA+TGG | + | chr5.2:81387331-81387350 | MS.gene81251:intron | 20.0% |
| !! | TCAGAAAATAGACAAATTAT+TGG | + | chr5.2:81386833-81386852 | MS.gene81251:intron | 20.0% |
| !! | TTTCTACGAATATAATCTTA+GGG | - | chr5.2:81387684-81387703 | None:intergenic | 20.0% |
| !!! | AAGAAAAGTGTATAAATGAA+GGG | - | chr5.2:81389810-81389829 | None:intergenic | 20.0% |
| !!! | AAGAACAATACCTTTTTTAA+GGG | - | chr5.2:81388034-81388053 | None:intergenic | 20.0% |
| !!! | CAATGAAAATGTACAATTTT+TGG | + | chr5.2:81387565-81387584 | MS.gene81251:intron | 20.0% |
| !!! | GATGTTTTTAGATAGAAAAA+AGG | - | chr5.2:81387361-81387380 | None:intergenic | 20.0% |
| !!! | GGACACTTTTTTTTAAAAAA+TGG | - | chr5.2:81389677-81389696 | None:intergenic | 20.0% |
| !!! | GTTTACATTGCTATTATTAA+TGG | + | chr5.2:81390675-81390694 | MS.gene81251:CDS | 20.0% |
| !!! | GTTTGAATTGTTATTATTGT+TGG | + | chr5.2:81387975-81387994 | MS.gene81251:intron | 20.0% |
| !!! | TAAGAAAAGTGTATAAATGA+AGG | - | chr5.2:81389811-81389830 | None:intergenic | 20.0% |
| !!! | TAAGAACAATACCTTTTTTA+AGG | - | chr5.2:81388035-81388054 | None:intergenic | 20.0% |
| !!! | TAGAATTGATTCTAATTGAA+GGG | - | chr5.2:81388352-81388371 | None:intergenic | 20.0% |
| !!! | TTGTTTTCTTAAATAACACA+AGG | + | chr5.2:81387414-81387433 | MS.gene81251:intron | 20.0% |
| !!! | TTTAAATTGTTTCTTCCTTT+GGG | + | chr5.2:81389179-81389198 | MS.gene81251:intron | 20.0% |
| !!! | TTTTAAATTGTTTCTTCCTT+TGG | + | chr5.2:81389178-81389197 | MS.gene81251:intron | 20.0% |
| !!! | TTTTATTCCCAACTTTTTTT+TGG | + | chr5.2:81388169-81388188 | MS.gene81251:intron | 20.0% |
| !!! | TTTTTTTTTAAGAAAGGAGA+CGG | + | chr5.2:81388507-81388526 | MS.gene81251:intron | 20.0% |
| ! | AAATGTGACCTGAAAAATAA+TGG | - | chr5.2:81386623-81386642 | None:intergenic | 25.0% |
| ! | AATACCAAATGAAAAAAAGG+AGG | - | chr5.2:81387220-81387239 | None:intergenic | 25.0% |
| ! | AATAGAAAATTGACTGTTCA+AGG | - | chr5.2:81390058-81390077 | None:intergenic | 25.0% |
| ! | AATATGCATATATATGTGCT+TGG | - | chr5.2:81388785-81388804 | None:intergenic | 25.0% |
| ! | AATATTTCAATGCATACAAG+AGG | - | chr5.2:81389107-81389126 | None:intergenic | 25.0% |
| ! | AATCAAATAGGTCATGTTTA+AGG | + | chr5.2:81386708-81386727 | MS.gene81251:intron | 25.0% |
| ! | AATTGAATGTACCAATGTAT+TGG | - | chr5.2:81387025-81387044 | None:intergenic | 25.0% |
| ! | ACACTATAGAATATGCATAT+AGG | - | chr5.2:81390098-81390117 | None:intergenic | 25.0% |
| ! | ACTAGCATTAGATTAATATG+AGG | - | chr5.2:81389563-81389582 | None:intergenic | 25.0% |
| ! | ATATGCATATATATGTGCTT+GGG | - | chr5.2:81388784-81388803 | None:intergenic | 25.0% |
| ! | ATCTTCTAATCCCTTAAAAA+AGG | + | chr5.2:81388021-81388040 | MS.gene81251:intron | 25.0% |
| ! | ATGAAAGTGAAATATATGTG+GGG | + | chr5.2:81389421-81389440 | MS.gene81251:intron | 25.0% |
| ! | ATGTTATAACATATTCTGGT+GGG | + | chr5.2:81391222-81391241 | MS.gene81251:CDS | 25.0% |
| ! | ATTCTGAATTCAAATCCAAA+AGG | - | chr5.2:81387773-81387792 | None:intergenic | 25.0% |
| ! | ATTCTTCCATAGATAAGATA+TGG | - | chr5.2:81389954-81389973 | None:intergenic | 25.0% |
| ! | ATTGAATGTACCAATGTATT+GGG | - | chr5.2:81387024-81387043 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr5.2:81389787-81389806 | None:intergenic | 25.0% |
| ! | GAAGATATTCTCAATCAAAA+AGG | - | chr5.2:81389929-81389948 | None:intergenic | 25.0% |
| ! | GTACATTCAATTCAACTAAT+TGG | + | chr5.2:81387033-81387052 | MS.gene81251:intron | 25.0% |
| ! | TAGAATATGCATATAGGTAT+AGG | - | chr5.2:81390092-81390111 | None:intergenic | 25.0% |
| ! | TATAAAAGCCAAAAATCACA+TGG | + | chr5.2:81388582-81388601 | MS.gene81251:intron | 25.0% |
| ! | TATGTTATAACATATTCTGG+TGG | + | chr5.2:81391221-81391240 | MS.gene81251:CDS | 25.0% |
| ! | TCAATTCAACTAATTGGATT+AGG | + | chr5.2:81387039-81387058 | MS.gene81251:intron | 25.0% |
| ! | TGACTCTTCTATACATTTAT+TGG | + | chr5.2:81391385-81391404 | MS.gene81251:CDS | 25.0% |
| ! | TGAGTAAAATGACATTATTC+AGG | - | chr5.2:81387831-81387850 | None:intergenic | 25.0% |
| ! | TTAAAAAGCTCAGTCAAAAT+AGG | - | chr5.2:81387292-81387311 | None:intergenic | 25.0% |
| ! | TTCACTTTCATTTCCAATAA+AGG | - | chr5.2:81389412-81389431 | None:intergenic | 25.0% |
| ! | TTTAAAAAGTGAACTACTCT+TGG | + | chr5.2:81388984-81389003 | MS.gene81251:intron | 25.0% |
| ! | TTTCATTTCCAATAAAGGTA+TGG | - | chr5.2:81389407-81389426 | None:intergenic | 25.0% |
| ! | TTTCTTAAATAACACAAGGA+GGG | + | chr5.2:81387418-81387437 | MS.gene81251:intron | 25.0% |
| !! | AGAAAAGTGTATAAATGAAG+GGG | - | chr5.2:81389809-81389828 | None:intergenic | 25.0% |
| !! | GTAGAATTGATTCTAATTGA+AGG | - | chr5.2:81388353-81388372 | None:intergenic | 25.0% |
| !! | TTTAAGGAACAGTATTTTCT+AGG | - | chr5.2:81387103-81387122 | None:intergenic | 25.0% |
| !! | TTTTCTTAAATAACACAAGG+AGG | + | chr5.2:81387417-81387436 | MS.gene81251:intron | 25.0% |
| !!! | AAAATGTACAATTTTTGGTC+CGG | + | chr5.2:81387570-81387589 | MS.gene81251:intron | 25.0% |
| !!! | ATTTTGATGTTTACCTTTCT+TGG | + | chr5.2:81387258-81387277 | MS.gene81251:intron | 25.0% |
| !!! | TGTGTATTTGGTTCTAATTT+TGG | - | chr5.2:81388430-81388449 | None:intergenic | 25.0% |
| AACACAGACCAAAAAAAAGT+TGG | - | chr5.2:81388180-81388199 | None:intergenic | 30.0% | |
| AACATAGGTACAAAAGGAAT+GGG | - | chr5.2:81388633-81388652 | None:intergenic | 30.0% | |
| AAGTTTACTCTTAACACAGT+TGG | + | chr5.2:81389008-81389027 | MS.gene81251:intron | 30.0% | |
| ACACAGACCAAAAAAAAGTT+GGG | - | chr5.2:81388179-81388198 | None:intergenic | 30.0% | |
| ACATGTGTATTCAATTGACA+GGG | - | chr5.2:81388473-81388492 | None:intergenic | 30.0% | |
| AGCTACTACATATTCTCTTT+CGG | - | chr5.2:81390964-81390983 | None:intergenic | 30.0% | |
| AGTTTACTCTTAACACAGTT+GGG | + | chr5.2:81389009-81389028 | MS.gene81251:intron | 30.0% | |
| ATATTTGTCTTTAGGCTTGT+TGG | + | chr5.2:81389319-81389338 | MS.gene81251:intron | 30.0% | |
| ATTGATGCTTCTCATTATCA+TGG | + | chr5.2:81386571-81386590 | MS.gene81251:CDS | 30.0% | |
| CATGGTTAAGAGGTTTATTA+GGG | + | chr5.2:81391183-81391202 | MS.gene81251:CDS | 30.0% | |
| GATATTCTCAATCAAAAAGG+AGG | - | chr5.2:81389926-81389945 | None:intergenic | 30.0% | |
| GGGTATGTTATAACATATTC+TGG | + | chr5.2:81391218-81391237 | MS.gene81251:CDS | 30.0% | |
| TAACATAGGTACAAAAGGAA+TGG | - | chr5.2:81388634-81388653 | None:intergenic | 30.0% | |
| TACATGTGTATTCAATTGAC+AGG | - | chr5.2:81388474-81388493 | None:intergenic | 30.0% | |
| TATGCATATATATGTGCTTG+GGG | - | chr5.2:81388783-81388802 | None:intergenic | 30.0% | |
| TATTAGGGTGCATGAATTTA+GGG | + | chr5.2:81391198-81391217 | MS.gene81251:CDS | 30.0% | |
| TCATGGTTAAGAGGTTTATT+AGG | + | chr5.2:81391182-81391201 | MS.gene81251:CDS | 30.0% | |
| TCTAATGCTAGTATAGACTA+TGG | + | chr5.2:81389571-81389590 | MS.gene81251:intron | 30.0% | |
| TGAGAATAACAAAAACCCAA+AGG | - | chr5.2:81389197-81389216 | None:intergenic | 30.0% | |
| TTAAGGGATTAGAAGATCAA+TGG | - | chr5.2:81388018-81388037 | None:intergenic | 30.0% | |
| TTATTAGGGTGCATGAATTT+AGG | + | chr5.2:81391197-81391216 | MS.gene81251:CDS | 30.0% | |
| ! | AATGGTGATGTTGTCAATAA+CGG | + | chr5.2:81390741-81390760 | MS.gene81251:CDS | 30.0% |
| ! | ACATTTACCCTTTTTGTGAA+AGG | - | chr5.2:81387172-81387191 | None:intergenic | 30.0% |
| ! | ATGGGTCTTGATGTTTTATA+TGG | + | chr5.2:81390227-81390246 | MS.gene81251:intron | 30.0% |
| ! | ATTGGAATCCATGTGATTTT+TGG | - | chr5.2:81388593-81388612 | None:intergenic | 30.0% |
| ! | ATTTTCTGAACTGAAAAAGC+TGG | - | chr5.2:81386822-81386841 | None:intergenic | 30.0% |
| ! | CATTTACCCTTTTTGTGAAA+GGG | - | chr5.2:81387171-81387190 | None:intergenic | 30.0% |
| ! | GTCTTGATGTTTTATATGGT+TGG | + | chr5.2:81390231-81390250 | MS.gene81251:intron | 30.0% |
| ! | TACAAAAGTGCATTTATCGA+AGG | + | chr5.2:81388890-81388909 | MS.gene81251:intron | 30.0% |
| ! | TCAGAATAGTACTCACATTT+TGG | + | chr5.2:81387786-81387805 | MS.gene81251:intron | 30.0% |
| ! | TGCTTAATTTTACCACGAAT+GGG | - | chr5.2:81387880-81387899 | None:intergenic | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | - | chr5.2:81389699-81389718 | None:intergenic | 30.0% |
| ! | TTTTCTTGTATGTTCTGTCT+TGG | + | chr5.2:81387193-81387212 | MS.gene81251:intron | 30.0% |
| !! | AAGTTGATAGATTCTCTTGT+TGG | + | chr5.2:81389363-81389382 | MS.gene81251:intron | 30.0% |
| !! | ATGATAATGAGAAGCATCAA+TGG | - | chr5.2:81386572-81386591 | None:intergenic | 30.0% |
| !! | GCTTTTTACTTTGTTTCAGA+AGG | + | chr5.2:81387390-81387409 | MS.gene81251:intron | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | - | chr5.2:81389698-81389717 | None:intergenic | 30.0% |
| !!! | ACTTTTTTTTGGTCTGTGTT+AGG | + | chr5.2:81388180-81388199 | MS.gene81251:intron | 30.0% |
| !!! | CTTAAAAACGGCTACTTTTA+AGG | + | chr5.2:81387117-81387136 | MS.gene81251:intron | 30.0% |
| !!! | CTTAAAAGTAGCCGTTTTTA+AGG | - | chr5.2:81387119-81387138 | None:intergenic | 30.0% |
| !!! | GTATTTGGTTCTAATTTTGG+AGG | - | chr5.2:81388427-81388446 | None:intergenic | 30.0% |
| AAAAATGGGTCAGTTATTCC+AGG | - | chr5.2:81389662-81389681 | None:intergenic | 35.0% | |
| AAAGGGACACACATTTAGTT+TGG | - | chr5.2:81387154-81387173 | None:intergenic | 35.0% | |
| AATTAGCTAGAGAAAAGCTG+TGG | - | chr5.2:81387654-81387673 | None:intergenic | 35.0% | |
| ACATAGGTACAAAAGGAATG+GGG | - | chr5.2:81388632-81388651 | None:intergenic | 35.0% | |
| AGGAAAGTCTGCACATAAAA+TGG | + | chr5.2:81388134-81388153 | MS.gene81251:intron | 35.0% | |
| AGGATTCATTGTAGGATCAT+TGG | + | chr5.2:81391058-81391077 | MS.gene81251:CDS | 35.0% | |
| ATAGGATTTCATGCCAAGAA+AGG | - | chr5.2:81387274-81387293 | None:intergenic | 35.0% | |
| ATGACCGGATATTTGTCTTT+AGG | + | chr5.2:81389311-81389330 | MS.gene81251:intron | 35.0% | |
| ATGCATATATATGTGCTTGG+GGG | - | chr5.2:81388782-81388801 | None:intergenic | 35.0% | |
| CAAGCCTAAAGACAAATATC+CGG | - | chr5.2:81389318-81389337 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | + | chr5.2:81389845-81389864 | MS.gene81251:intron | 35.0% | |
| CGTGAGTAGGTTTAGATTAA+GGG | + | chr5.2:81391157-81391176 | MS.gene81251:CDS | 35.0% | |
| CTATGTTAGAAGCTCTCATT+GGG | + | chr5.2:81388646-81388665 | MS.gene81251:intron | 35.0% | |
| CTCTAACTAACTGTGTAAAG+TGG | - | chr5.2:81387545-81387564 | None:intergenic | 35.0% | |
| CTGAATTCAAATCCAAAAGG+TGG | - | chr5.2:81387770-81387789 | None:intergenic | 35.0% | |
| CTTCCACCATATCTTATCTA+TGG | + | chr5.2:81389945-81389964 | MS.gene81251:intron | 35.0% | |
| CTTCCATAGATAAGATATGG+TGG | - | chr5.2:81389951-81389970 | None:intergenic | 35.0% | |
| GAACTTTAGACCCAATACAT+TGG | + | chr5.2:81387011-81387030 | MS.gene81251:intron | 35.0% | |
| GCTTCTAACATAGGTACAAA+AGG | - | chr5.2:81388639-81388658 | None:intergenic | 35.0% | |
| GTAGAATTATTACCCATTCG+TGG | + | chr5.2:81387865-81387884 | MS.gene81251:intron | 35.0% | |
| GTTAACCGAATTAGTTGAAC+CGG | + | chr5.2:81390920-81390939 | MS.gene81251:CDS | 35.0% | |
| TATTCGTAGAAATCTGCAGT+TGG | + | chr5.2:81387692-81387711 | MS.gene81251:intron | 35.0% | |
| TCAATCAAAAAGGAGGTAGT+TGG | - | chr5.2:81389919-81389938 | None:intergenic | 35.0% | |
| TCCAATTACAATTCCCGAAA+CGG | - | chr5.2:81390619-81390638 | None:intergenic | 35.0% | |
| TCCATAACAGGATTCATTGT+AGG | + | chr5.2:81391050-81391069 | MS.gene81251:CDS | 35.0% | |
| TCCTACAATGAATCCTGTTA+TGG | - | chr5.2:81391054-81391073 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr5.2:81389832-81389851 | MS.gene81251:intron | 35.0% | |
| TCTTAACACAGTTGGGTTTA+GGG | + | chr5.2:81389016-81389035 | MS.gene81251:intron | 35.0% | |
| TGTATAAATGAAGGGGAAAG+TGG | - | chr5.2:81389802-81389821 | None:intergenic | 35.0% | |
| TTTCAACTTAAGAAACCCAG+AGG | + | chr5.2:81391007-81391026 | MS.gene81251:CDS | 35.0% | |
| ! | ACAGCTTTTCTCTAGCTAAT+TGG | + | chr5.2:81387653-81387672 | MS.gene81251:intron | 35.0% |
| ! | ATTGCTACTCCTTTAGAAGA+TGG | + | chr5.2:81389251-81389270 | MS.gene81251:intron | 35.0% |
| ! | ATTGCTATTATTAATGGGCC+TGG | + | chr5.2:81390681-81390700 | MS.gene81251:CDS | 35.0% |
| ! | GAAGGGGAGTATATGATAAT+AGG | + | chr5.2:81389872-81389891 | MS.gene81251:intron | 35.0% |
| ! | GGAGTATTAGTAGAATTTGC+CGG | + | chr5.2:81390762-81390781 | MS.gene81251:CDS | 35.0% |
| ! | GTGCTTAATTTTACCACGAA+TGG | - | chr5.2:81387881-81387900 | None:intergenic | 35.0% |
| ! | TTCCAATAAAGGTATGGTCA+AGG | - | chr5.2:81389401-81389420 | None:intergenic | 35.0% |
| ! | TTGCTACTCCTTTAGAAGAT+GGG | + | chr5.2:81389252-81389271 | MS.gene81251:intron | 35.0% |
| !! | TAGAGTACTGTATGGTAGAA+AGG | - | chr5.2:81387480-81387499 | None:intergenic | 35.0% |
| !! | TAGAGTAGTAGAGTACTGTA+TGG | - | chr5.2:81387488-81387507 | None:intergenic | 35.0% |
| !! | TGCTCTTGCCATTATTTTTC+AGG | + | chr5.2:81386612-81386631 | MS.gene81251:CDS | 35.0% |
| !!! | AAAAACGGCTACTTTTAAGG+CGG | + | chr5.2:81387120-81387139 | MS.gene81251:intron | 35.0% |
| !!! | TGGACCTCCTTTTTTTCATT+TGG | + | chr5.2:81387213-81387232 | MS.gene81251:intron | 35.0% |
| AAATGTGCTAACATGTGCAC+CGG | - | chr5.2:81390556-81390575 | None:intergenic | 40.0% | |
| AACCCAACTGTGCATATGTT+AGG | - | chr5.2:81387724-81387743 | None:intergenic | 40.0% | |
| ACAAGTACATGGCAATAGCA+TGG | + | chr5.2:81391328-81391347 | MS.gene81251:CDS | 40.0% | |
| ACATCACGTAATAGAACCTC+TGG | - | chr5.2:81391026-81391045 | None:intergenic | 40.0% | |
| ACCCAACTGTGCATATGTTA+GGG | - | chr5.2:81387723-81387742 | None:intergenic | 40.0% | |
| AGCCTTGACCATACCTTTAT+TGG | + | chr5.2:81389396-81389415 | MS.gene81251:intron | 40.0% | |
| AGCTTGCACAAGTACAAGAT+TGG | + | chr5.2:81390980-81390999 | MS.gene81251:CDS | 40.0% | |
| ATCAAAAGCTATAGCTAGCG+TGG | - | chr5.2:81389449-81389468 | None:intergenic | 40.0% | |
| ATCATTGGATGTTAGCCATG+AGG | + | chr5.2:81391073-81391092 | MS.gene81251:CDS | 40.0% | |
| ATGTTGTGTTCCCATTCAGA+GGG | - | chr5.2:81390033-81390052 | None:intergenic | 40.0% | |
| CATATTCTCTTTCGGTGACT+CGG | - | chr5.2:81390956-81390975 | None:intergenic | 40.0% | |
| CATCACGTAATAGAACCTCT+GGG | - | chr5.2:81391025-81391044 | None:intergenic | 40.0% | |
| CATGTAGCAAGAAAGATGAC+CGG | + | chr5.2:81389296-81389315 | MS.gene81251:intron | 40.0% | |
| CCAATGAGAGCTTCTAACAT+AGG | - | chr5.2:81388648-81388667 | None:intergenic | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | - | chr5.2:81389848-81389867 | None:intergenic | 40.0% | |
| CCTATGTTAGAAGCTCTCAT+TGG | + | chr5.2:81388645-81388664 | MS.gene81251:intron | 40.0% | |
| CTCTTAACACAGTTGGGTTT+AGG | + | chr5.2:81389015-81389034 | MS.gene81251:intron | 40.0% | |
| CTTCTCCATCATCTCTAACT+GGG | - | chr5.2:81391307-81391326 | None:intergenic | 40.0% | |
| GATAGAAAAAAGGCAAGCCA+TGG | - | chr5.2:81387351-81387370 | None:intergenic | 40.0% | |
| GATCTCCTGGATCATATTGT+GGG | - | chr5.2:81390437-81390456 | None:intergenic | 40.0% | |
| GCGCAGAACATATAGATTGA+GGG | + | chr5.2:81390335-81390354 | MS.gene81251:CDS | 40.0% | |
| GCGTGAGTAGGTTTAGATTA+AGG | + | chr5.2:81391156-81391175 | MS.gene81251:CDS | 40.0% | |
| GGCAGTTAGAATACATCTAC+TGG | + | chr5.2:81390364-81390383 | MS.gene81251:CDS | 40.0% | |
| GGTATTGTCAAGGCAAGAAT+TGG | - | chr5.2:81388611-81388630 | None:intergenic | 40.0% | |
| GGTTTAGATTAAGGGCTTCA+TGG | + | chr5.2:81391165-81391184 | MS.gene81251:CDS | 40.0% | |
| GTAGGTCAATTATACCGGAA+CGG | + | chr5.2:81389850-81389869 | MS.gene81251:intron | 40.0% | |
| GTGTGTCCCTTTCACAAAAA+GGG | + | chr5.2:81387162-81387181 | MS.gene81251:intron | 40.0% | |
| TAACATATGCACAGTTGGGT+TGG | + | chr5.2:81387723-81387742 | MS.gene81251:intron | 40.0% | |
| TATGGTTGGAAAATGCATGC+AGG | + | chr5.2:81390245-81390264 | MS.gene81251:intron | 40.0% | |
| TCAATTATACCGGAACGGAA+GGG | + | chr5.2:81389855-81389874 | MS.gene81251:intron | 40.0% | |
| TCCAACCATGGTCTTCTATT+CGG | + | chr5.2:81390579-81390598 | MS.gene81251:CDS | 40.0% | |
| TCCGTTTCGGGAATTGTAAT+TGG | + | chr5.2:81390615-81390634 | MS.gene81251:CDS | 40.0% | |
| TGAACCTGTTGTTGAAGCAT+TGG | + | chr5.2:81386534-81386553 | MS.gene81251:CDS | 40.0% | |
| TGATCTCCTGGATCATATTG+TGG | - | chr5.2:81390438-81390457 | None:intergenic | 40.0% | |
| TGCATATATATGTGCTTGGG+GGG | - | chr5.2:81388781-81388800 | None:intergenic | 40.0% | |
| TGTGTGTCCCTTTCACAAAA+AGG | + | chr5.2:81387161-81387180 | MS.gene81251:intron | 40.0% | |
| TTAAGGGCTTCATGGTTAAG+AGG | + | chr5.2:81391173-81391192 | MS.gene81251:CDS | 40.0% | |
| TTCATTAACCGATCCGGAAA+CGG | + | chr5.2:81390881-81390900 | MS.gene81251:CDS | 40.0% | |
| ! | AAGTGGTTAGATCCACCTTT+TGG | + | chr5.2:81387755-81387774 | MS.gene81251:intron | 40.0% |
| ! | ATAACATATTCTGGTGGGTC+TGG | + | chr5.2:81391227-81391246 | MS.gene81251:CDS | 40.0% |
| ! | ATACATCTACTGGCATCGAA+CGG | + | chr5.2:81390374-81390393 | MS.gene81251:CDS | 40.0% |
| ! | GTGCACATGTTAGCACATTT+TGG | + | chr5.2:81390556-81390575 | MS.gene81251:CDS | 40.0% |
| ! | TAGCCATGAGGTTTTTGTTG+TGG | + | chr5.2:81391085-81391104 | MS.gene81251:CDS | 40.0% |
| ! | TGCTACTCCTTTAGAAGATG+GGG | + | chr5.2:81389253-81389272 | MS.gene81251:intron | 40.0% |
| ! | TTGGTCTGTGTTAGGTTTTG+CGG | + | chr5.2:81388188-81388207 | MS.gene81251:intron | 40.0% |
| ! | TTTGTTGTGGTGGAAAGAAG+TGG | + | chr5.2:81391098-81391117 | MS.gene81251:CDS | 40.0% |
| !! | AAAGGAATGGGGTATTGTCA+AGG | - | chr5.2:81388621-81388640 | None:intergenic | 40.0% |
| !! | GTCTGGTTTGTTGAGAGTAT+GGG | + | chr5.2:81391244-81391263 | MS.gene81251:CDS | 40.0% |
| !! | TTGTCTTTAGGCTTGTTGGA+GGG | + | chr5.2:81389323-81389342 | MS.gene81251:intron | 40.0% |
| !! | TTTGTCTTTAGGCTTGTTGG+AGG | + | chr5.2:81389322-81389341 | MS.gene81251:intron | 40.0% |
| !!! | AAAACGGCTACTTTTAAGGC+GGG | + | chr5.2:81387121-81387140 | MS.gene81251:intron | 40.0% |
| !!! | GTACAATTTTTGGTCCGGTT+TGG | + | chr5.2:81387575-81387594 | MS.gene81251:intron | 40.0% |
| AAGGAGGTAGTTGGATGAGA+TGG | - | chr5.2:81389910-81389929 | None:intergenic | 45.0% | |
| ACCGAATTAGTTGAACCGGT+CGG | + | chr5.2:81390924-81390943 | MS.gene81251:CDS | 45.0% | |
| ATAATTTCGAGCGCGTGAGT+AGG | + | chr5.2:81391144-81391163 | MS.gene81251:CDS | 45.0% | |
| ATCTCCATCTAATCTCGCGA+AGG | - | chr5.2:81390655-81390674 | None:intergenic | 45.0% | |
| ATGGGACATACATGAACCTG+CGG | + | chr5.2:81391262-81391281 | MS.gene81251:CDS | 45.0% | |
| ATGGGTCAGTTATTCCAGGA+CGG | - | chr5.2:81389658-81389677 | None:intergenic | 45.0% | |
| CAATTATACCGGAACGGAAG+GGG | + | chr5.2:81389856-81389875 | MS.gene81251:intron | 45.0% | |
| CATATAGATTGAGGGACACG+TGG | + | chr5.2:81390343-81390362 | MS.gene81251:CDS | 45.0% | |
| CCACCACAACAAAAACCTCA+TGG | - | chr5.2:81391091-81391110 | None:intergenic | 45.0% | |
| CCATCAACCCCATCTTCTAA+AGG | - | chr5.2:81389263-81389282 | None:intergenic | 45.0% | |
| CCTTCTCCATCATCTCTAAC+TGG | - | chr5.2:81391308-81391327 | None:intergenic | 45.0% | |
| CGTGATGTAGTGTCCATAAC+AGG | + | chr5.2:81391038-81391057 | MS.gene81251:CDS | 45.0% | |
| GATGGAGAAGGACAAGTACA+TGG | + | chr5.2:81391317-81391336 | MS.gene81251:CDS | 45.0% | |
| GATGTTGTGTTCCCATTCAG+AGG | - | chr5.2:81390034-81390053 | None:intergenic | 45.0% | |
| GCCCTAACATATGCACAGTT+GGG | + | chr5.2:81387719-81387738 | MS.gene81251:intron | 45.0% | |
| GGCGCAGAACATATAGATTG+AGG | + | chr5.2:81390334-81390353 | MS.gene81251:CDS | 45.0% | |
| GGTTGCTAATCAAACTCACG+TGG | + | chr5.2:81391349-81391368 | MS.gene81251:CDS | 45.0% | |
| GTAGCCAATGCTTCAACAAC+AGG | - | chr5.2:81386541-81386560 | None:intergenic | 45.0% | |
| GTATCTGCGTATATCTCTGC+AGG | - | chr5.2:81386884-81386903 | None:intergenic | 45.0% | |
| GTCAATTATACCGGAACGGA+AGG | + | chr5.2:81389854-81389873 | MS.gene81251:intron | 45.0% | |
| TGCCCTAACATATGCACAGT+TGG | + | chr5.2:81387718-81387737 | MS.gene81251:intron | 45.0% | |
| TGGTTTATATGCTGGCCATG+CGG | + | chr5.2:81390803-81390822 | MS.gene81251:CDS | 45.0% | |
| ! | ACCGACCGGTTCAACTAATT+CGG | - | chr5.2:81390928-81390947 | None:intergenic | 45.0% |
| ! | CCCGTTTTCACAATCCGTTT+CGG | + | chr5.2:81390602-81390621 | MS.gene81251:CDS | 45.0% |
| ! | CCGTTTTCACAATCCGTTTC+GGG | + | chr5.2:81390603-81390622 | MS.gene81251:CDS | 45.0% |
| ! | CCTTTAGAAGATGGGGTTGA+TGG | + | chr5.2:81389260-81389279 | MS.gene81251:intron | 45.0% |
| ! | GAAGTGGTGTTGGAACTGTT+CGG | + | chr5.2:81391114-81391133 | MS.gene81251:CDS | 45.0% |
| ! | GCATGCAGGTTTGTTCAACA+TGG | + | chr5.2:81390259-81390278 | MS.gene81251:intron | 45.0% |
| !! | AGCACATTTTGGTCCAACCA+TGG | + | chr5.2:81390567-81390586 | MS.gene81251:CDS | 45.0% |
| !! | ATGGAGAGAAGTGTCACGTT+CGG | + | chr5.2:81390278-81390297 | MS.gene81251:CDS | 45.0% |
| !! | CCAGTTAGAGATGATGGAGA+AGG | + | chr5.2:81391305-81391324 | MS.gene81251:CDS | 45.0% |
| !! | CCATGAGGTTTTTGTTGTGG+TGG | + | chr5.2:81391088-81391107 | MS.gene81251:CDS | 45.0% |
| !! | CCCGAAACGGATTGTGAAAA+CGG | - | chr5.2:81390606-81390625 | None:intergenic | 45.0% |
| !! | CCGAAACGGATTGTGAAAAC+GGG | - | chr5.2:81390605-81390624 | None:intergenic | 45.0% |
| !! | GGTCTGGTTTGTTGAGAGTA+TGG | + | chr5.2:81391243-81391262 | MS.gene81251:CDS | 45.0% |
| !! | TATGCACAGTTGGGTTGGAT+CGG | + | chr5.2:81387728-81387747 | MS.gene81251:intron | 45.0% |
| !! | TGGGGTTGATGGTTTGTTAG+TGG | + | chr5.2:81389271-81389290 | MS.gene81251:intron | 45.0% |
| !! | TGGTGGGTTGGTTTATATGC+TGG | + | chr5.2:81390795-81390814 | MS.gene81251:CDS | 45.0% |
| !! | TGTCTTTAGGCTTGTTGGAG+GGG | + | chr5.2:81389324-81389343 | MS.gene81251:intron | 45.0% |
| !!! | AATAATTTTTTTTTTAAGAA+AGG | + | chr5.2:81388501-81388520 | MS.gene81251:intron | 5.0% |
| !!! | TATAAAAATAATATTTCTTT+TGG | + | chr5.2:81386945-81386964 | MS.gene81251:intron | 5.0% |
| AATCGCACCTTCCCTCTGAA+TGG | + | chr5.2:81390019-81390038 | MS.gene81251:intron | 50.0% | |
| ACGCTCCCAGTTAGAGATGA+TGG | + | chr5.2:81391299-81391318 | MS.gene81251:CDS | 50.0% | |
| ATCCGGAAACGGTTCAAGGA+TGG | + | chr5.2:81390892-81390911 | MS.gene81251:CDS | 50.0% | |
| ATCGCACCTTCCCTCTGAAT+GGG | + | chr5.2:81390020-81390039 | MS.gene81251:intron | 50.0% | |
| ATCTAATCTCGCGAAGGCGA+GGG | - | chr5.2:81390649-81390668 | None:intergenic | 50.0% | |
| ATTGTATACTCCCTCCGTCC+TGG | + | chr5.2:81389641-81389660 | MS.gene81251:intron | 50.0% | |
| CATATACTCCCCTTCCGTTC+CGG | - | chr5.2:81389867-81389886 | None:intergenic | 50.0% | |
| GACCACTAAAGCATGTCTCC+CGG | - | chr5.2:81390415-81390434 | None:intergenic | 50.0% | |
| GCCGAATAGAAGACCATGGT+TGG | - | chr5.2:81390583-81390602 | None:intergenic | 50.0% | |
| GGTTTATATGCTGGCCATGC+GGG | + | chr5.2:81390804-81390823 | MS.gene81251:CDS | 50.0% | |
| GTCAGTTATTCCAGGACGGA+GGG | - | chr5.2:81389654-81389673 | None:intergenic | 50.0% | |
| GTGGTCCCACAATATGATCC+AGG | + | chr5.2:81390429-81390448 | MS.gene81251:CDS | 50.0% | |
| TCAAATATGGGACGCGCACA+CGG | + | chr5.2:81390836-81390855 | MS.gene81251:CDS | 50.0% | |
| TCCTTGAACCGTTTCCGGAT+CGG | - | chr5.2:81390892-81390911 | None:intergenic | 50.0% | |
| TGCCATCCTTGAACCGTTTC+CGG | - | chr5.2:81390897-81390916 | None:intergenic | 50.0% | |
| TGGCGGTTCATTAACCGATC+CGG | + | chr5.2:81390875-81390894 | MS.gene81251:CDS | 50.0% | |
| TGTCACGTTCGGATCTACTG+TGG | + | chr5.2:81390289-81390308 | MS.gene81251:CDS | 50.0% | |
| TGTGTTCCCATTCAGAGGGA+AGG | - | chr5.2:81390029-81390048 | None:intergenic | 50.0% | |
| ! | GGGCGGGGCTTTTCAAATAT+GGG | + | chr5.2:81390824-81390843 | MS.gene81251:CDS | 50.0% |
| ! | GTGGTGGAAAGAAGTGGTGT+TGG | + | chr5.2:81391104-81391123 | MS.gene81251:CDS | 50.0% |
| !! | AATTTGCCGGCTCTAGTCGT+TGG | + | chr5.2:81390775-81390794 | MS.gene81251:CDS | 50.0% |
| !! | ATGCACAGTTGGGTTGGATC+GGG | + | chr5.2:81387729-81387748 | MS.gene81251:intron | 50.0% |
| !!! | AGGTTTTGGTGGTGATCTCC+TGG | - | chr5.2:81390450-81390469 | None:intergenic | 50.0% |
| AACCCACCAACGACTAGAGC+CGG | - | chr5.2:81390784-81390803 | None:intergenic | 55.0% | |
| AATGGGCCTGGACCAATACC+CGG | + | chr5.2:81390693-81390712 | MS.gene81251:CDS | 55.0% | |
| AATTGCCCGTCGTGCAGGAA+TGG | - | chr5.2:81390721-81390740 | None:intergenic | 55.0% | |
| ACCGATCCGGAAACGGTTCA+AGG | + | chr5.2:81390888-81390907 | MS.gene81251:CDS | 55.0% | |
| ACGGAACAGCGCGTGTTTGT+TGG | + | chr5.2:81390855-81390874 | MS.gene81251:CDS | 55.0% | |
| ACGGCCAGGAACTTTACCAC+CGG | + | chr5.2:81390393-81390412 | MS.gene81251:CDS | 55.0% | |
| ACGGGCCGAATAGAAGACCA+TGG | - | chr5.2:81390587-81390606 | None:intergenic | 55.0% | |
| ATTGCCCGTCGTGCAGGAAT+GGG | - | chr5.2:81390720-81390739 | None:intergenic | 55.0% | |
| CACCGGGAGACATGCTTTAG+TGG | + | chr5.2:81390410-81390429 | MS.gene81251:CDS | 55.0% | |
| CACTAAAGCATGTCTCCCGG+TGG | - | chr5.2:81390412-81390431 | None:intergenic | 55.0% | |
| CATCTAATCTCGCGAAGGCG+AGG | - | chr5.2:81390650-81390669 | None:intergenic | 55.0% | |
| CCATTAATTGCCCGTCGTGC+AGG | - | chr5.2:81390726-81390745 | None:intergenic | 55.0% | |
| CCTGCACGACGGGCAATTAA+TGG | + | chr5.2:81390723-81390742 | MS.gene81251:CDS | 55.0% | |
| CGACTCTTCGATCTCCACAC+CGG | + | chr5.2:81390534-81390553 | MS.gene81251:CDS | 55.0% | |
| CGGTGTGGAGATCGAAGAGT+CGG | - | chr5.2:81390536-81390555 | None:intergenic | 55.0% | |
| CTCGCCTTCGCGAGATTAGA+TGG | + | chr5.2:81390648-81390667 | MS.gene81251:CDS | 55.0% | |
| GGTCAGTTATTCCAGGACGG+AGG | - | chr5.2:81389655-81389674 | None:intergenic | 55.0% | |
| GTTCGGATCTACTGTGGCAG+AGG | + | chr5.2:81390295-81390314 | MS.gene81251:CDS | 55.0% | |
| TCTCCCGGTGGTAAAGTTCC+TGG | - | chr5.2:81390400-81390419 | None:intergenic | 55.0% | |
| TTATATGCTGGCCATGCGGG+CGG | + | chr5.2:81390807-81390826 | MS.gene81251:CDS | 55.0% | |
| ! | CGGGCGGGGCTTTTCAAATA+TGG | + | chr5.2:81390823-81390842 | MS.gene81251:CDS | 55.0% |
| ! | GAACAGCGCGTGTTTGTTGG+CGG | + | chr5.2:81390858-81390877 | MS.gene81251:CDS | 55.0% |
| ! | TGCTAACATGTGCACCGGTG+TGG | - | chr5.2:81390551-81390570 | None:intergenic | 55.0% |
| ! | TGGGTTGGATCGGGTAGAAG+TGG | + | chr5.2:81387738-81387757 | MS.gene81251:intron | 55.0% |
| !! | AGCGGCAGATGAGGTTTTGG+TGG | - | chr5.2:81390461-81390480 | None:intergenic | 55.0% |
| AGAGGCTCACGAGACGCATC+TGG | + | chr5.2:81390313-81390332 | MS.gene81251:CDS | 60.0% | |
| ATGGGCCTGGACCAATACCC+GGG | + | chr5.2:81390694-81390713 | MS.gene81251:CDS | 60.0% | |
| CGGCCAGGAACTTTACCACC+GGG | + | chr5.2:81390394-81390413 | MS.gene81251:CDS | 60.0% | |
| GTGATACACAATCGCGCCGC+AGG | - | chr5.2:81391281-81391300 | None:intergenic | 60.0% | |
| TATATGCTGGCCATGCGGGC+GGG | + | chr5.2:81390808-81390827 | MS.gene81251:CDS | 60.0% | |
| TGTCGGAGAGAGTGAGGCAG+CGG | - | chr5.2:81390479-81390498 | None:intergenic | 60.0% | |
| TTTGAAAAGCCCCGCCCGCA+TGG | - | chr5.2:81390821-81390840 | None:intergenic | 60.0% | |
| ! | GGCAGCGGCAGATGAGGTTT+TGG | - | chr5.2:81390464-81390483 | None:intergenic | 60.0% |
| ! | GGCTCTAGTCGTTGGTGGGT+TGG | + | chr5.2:81390783-81390802 | MS.gene81251:CDS | 60.0% |
| ! | TCTACTGGCATCGAACGGCC+AGG | + | chr5.2:81390379-81390398 | MS.gene81251:CDS | 60.0% |
| !! | TGCCGGCTCTAGTCGTTGGT+GGG | + | chr5.2:81390779-81390798 | MS.gene81251:CDS | 60.0% |
| !! | TTGCCGGCTCTAGTCGTTGG+TGG | + | chr5.2:81390778-81390797 | MS.gene81251:CDS | 60.0% |
| ATATGCTGGCCATGCGGGCG+GGG | + | chr5.2:81390809-81390828 | MS.gene81251:CDS | 65.0% | |
| GAGTGAGGCAGCGGCAGATG+AGG | - | chr5.2:81390470-81390489 | None:intergenic | 65.0% | |
| GCAGGAATGGGCCCGGGTAT+TGG | - | chr5.2:81390708-81390727 | None:intergenic | 65.0% | |
| ! | GTGACTCGGACTCGACCGAC+CGG | - | chr5.2:81390942-81390961 | None:intergenic | 65.0% |
| !! | ATGGGCCCGGGTATTGGTCC+AGG | - | chr5.2:81390702-81390721 | None:intergenic | 65.0% |
| !! | GGTGGGTGTCGGAGAGAGTG+AGG | - | chr5.2:81390485-81390504 | None:intergenic | 65.0% |
| CCGGGCCCATTCCTGCACGA+CGG | + | chr5.2:81390712-81390731 | MS.gene81251:CDS | 70.0% | |
| CCGTCGTGCAGGAATGGGCC+CGG | - | chr5.2:81390715-81390734 | None:intergenic | 70.0% | |
| CGGGCCCATTCCTGCACGAC+GGG | + | chr5.2:81390713-81390732 | MS.gene81251:CDS | 70.0% | |
| CGTCGTGCAGGAATGGGCCC+GGG | - | chr5.2:81390714-81390733 | None:intergenic | 70.0% | |
| TCCGACACCCACCTCGCCTG+CGG | + | chr5.2:81390492-81390511 | MS.gene81251:CDS | 70.0% | |
| GCCGCAGGCGAGGTGGGTGT+CGG | - | chr5.2:81390496-81390515 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 81386517 | 81391424 | 81386517 | ID=MS.gene81251 |
| chr5.2 | mRNA | 81386517 | 81391424 | 81386517 | ID=MS.gene81251.t1;Parent=MS.gene81251 |
| chr5.2 | exon | 81386517 | 81386633 | 81386517 | ID=MS.gene81251.t1.exon1;Parent=MS.gene81251.t1 |
| chr5.2 | CDS | 81386517 | 81386633 | 81386517 | ID=cds.MS.gene81251.t1;Parent=MS.gene81251.t1 |
| chr5.2 | exon | 81390267 | 81391424 | 81390267 | ID=MS.gene81251.t1.exon2;Parent=MS.gene81251.t1 |
| chr5.2 | CDS | 81390267 | 81391424 | 81390267 | ID=cds.MS.gene81251.t1;Parent=MS.gene81251.t1 |
| Gene Sequence |
| Protein sequence |
