AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81427

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81427.t1 MTR_5g093940 97.669 815 19 0 1 815 1 815 0.0 1641
MS.gene81427.t1 MTR_5g093940 95.673 832 19 1 1 815 1 832 0.0 1630
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81427.t1 AT1G50620 33.229 641 332 17 3 626 2 563 2.31e-84 282
MS.gene81427.t1 AT3G20280 34.756 492 222 15 10 491 5 407 7.57e-69 242
MS.gene81427.t1 AT3G20280 34.756 492 222 15 10 491 5 407 7.57e-69 242
MS.gene81427.t1 AT3G20280 34.959 492 220 15 10 491 5 406 2.79e-68 241
MS.gene81427.t1 AT3G20280 34.959 492 220 15 10 491 5 406 2.79e-68 241
MS.gene81427.t1 AT3G20280 43.704 135 74 2 358 491 13 146 2.73e-34 138

Find 214 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGAACCTCTAACAGAATT+TGG 0.177379 5.2:+79266703 None:intergenic
CGCATCACACGGCCATATTT+TGG 0.179992 5.2:+79267303 None:intergenic
AACAAACCTGCAAAGGAAAA+TGG 0.206689 5.2:+79264991 None:intergenic
GCTTTGGTATTAACAACTTC+TGG 0.239867 5.2:+79267559 None:intergenic
CCAAATTCTGTTAGAGGTTC+TGG 0.240625 5.2:-79266703 MS.gene81427:CDS
GCTGAATTAGAGGGAAAATT+TGG 0.254184 5.2:+79267264 None:intergenic
TACCAATCTTGCTGCATTGA+TGG 0.287633 5.2:-79266577 MS.gene81427:CDS
AGATTCAGAAGTATCTTTAC+AGG 0.291754 5.2:+79266939 None:intergenic
AACCCACTTCACCCCAGTTT+TGG 0.292600 5.2:+79266062 None:intergenic
CCTTGTATATCTCTCGTATC+TGG 0.292839 5.2:+79267099 None:intergenic
TACTATGCACCAGCCGTTGC+AGG 0.304496 5.2:-79267640 MS.gene81427:CDS
AAGCCTTTGCCTCCAAAATA+TGG 0.319020 5.2:-79267315 MS.gene81427:CDS
GCACAACCAAATTCTGTTAG+AGG 0.323203 5.2:-79266709 MS.gene81427:CDS
TGCTGAACAAATAGATTCTA+AGG 0.324390 5.2:-79266968 MS.gene81427:CDS
CTACTTTCCTGATGATTTGC+CGG 0.326963 5.2:-79266025 MS.gene81427:CDS
ATGTGGGAAGATTCCAAAAC+TGG 0.327053 5.2:-79266075 MS.gene81427:CDS
TGGGGCTCCTTATGTCCTTC+AGG 0.331452 5.2:-79268502 MS.gene81427:CDS
ACCTTCGGATCTAAGTTATC+TGG 0.333379 5.2:+79267213 None:intergenic
GCAGATTTCACACATATGTT+TGG 0.346253 5.2:+79267030 None:intergenic
CTAAACTGTAGCAAATTCAT+TGG 0.350286 5.2:-79267874 MS.gene81427:intron
AATGACAGAAGATGTCAATT+TGG 0.360459 5.2:-79265040 MS.gene81427:CDS
TTGCTTGCCTGAAGTTTAGA+AGG 0.364469 5.2:+79266496 None:intergenic
GCCGTTGCAGGGTGGGAATA+TGG 0.364784 5.2:-79267628 MS.gene81427:CDS
TTGAATACCAGCTGAATTAG+AGG 0.365719 5.2:+79267254 None:intergenic
TCTGGTTTCTTCTCTGAAGA+TGG 0.371119 5.2:+79267231 None:intergenic
GATGATTTGCCGGGGAATAT+TGG 0.377341 5.2:-79266015 MS.gene81427:CDS
CTCCATCAATGCAGCAAGAT+TGG 0.380179 5.2:+79266575 None:intergenic
TCTTGTTTAAATTTATCATA+TGG 0.381248 5.2:+79265064 None:intergenic
TAACAGCAGCTCAGAACATT+AGG 0.389751 5.2:-79267698 MS.gene81427:CDS
ACTAACACCTTCTAAACTTC+AGG 0.394509 5.2:-79266503 MS.gene81427:intron
CATCAGTGAATGCTCCTTCA+TGG 0.395283 5.2:-79267842 MS.gene81427:CDS
AGGTGTTAGTTTGCCATGGC+TGG 0.400222 5.2:+79266516 None:intergenic
GGAGTCCATGTGGGATGATC+AGG 0.400694 5.2:+79267534 None:intergenic
TCCACCGGTGTTTGTTTGAA+AGG 0.401303 5.2:+79268800 None:intergenic
TTAGCCAGCTCAGATATGTT+AGG 0.403134 5.2:+79266907 None:intergenic
CTCTGTGATGCCTGTGAAAA+GGG 0.404413 5.2:-79267432 MS.gene81427:CDS
AAGGGTGTGGATCAGAGGTT+AGG 0.406808 5.2:-79269791 MS.gene81427:CDS
CCTTATGTCCTTCAGGTTCA+AGG 0.407142 5.2:-79268495 MS.gene81427:intron
TGGATCAGGCTTCTCGTCAA+TGG 0.408193 5.2:+79267050 None:intergenic
GGTGGAGGAGAAAGAGAATT+CGG 0.409063 5.2:-79270023 MS.gene81427:CDS
CCATTTGTTGTTAACATCTG+TGG 0.410839 5.2:+79267186 None:intergenic
GCAGTTCCTTCAACCTTGAC+AGG 0.411352 5.2:+79267753 None:intergenic
CAGACTCAACCTGTGTCATT+AGG 0.411643 5.2:-79267813 MS.gene81427:CDS
TTCACACATATGTTTGGATC+AGG 0.414156 5.2:+79267036 None:intergenic
TGCATAGTAGACATATTTCC+AGG 0.419884 5.2:+79267654 None:intergenic
AAGGAGCATTCACTGATGAT+TGG 0.420539 5.2:+79267847 None:intergenic
TAATAGTGATAGAGTTGAAA+TGG 0.426583 5.2:-79265119 MS.gene81427:CDS
ACGAGTGGCGGAGATTGTTT+TGG 0.427221 5.2:-79269987 MS.gene81427:CDS
CCACCGGTGTTTGTTTGAAA+GGG 0.428372 5.2:+79268801 None:intergenic
CTAGGCAATGCTACAGAAGA+TGG 0.430376 5.2:+79268564 None:intergenic
GGTAGTGTGATTGATGATCT+TGG 0.433796 5.2:-79269824 MS.gene81427:CDS
TACTTTCCTGATGATTTGCC+GGG 0.434354 5.2:-79266024 MS.gene81427:CDS
GTGGGATGATCAGGAAGCTT+TGG 0.435804 5.2:+79267543 None:intergenic
CTTTATTATTAGTAATCAAA+AGG 0.437685 5.2:-79266788 MS.gene81427:CDS
TGGCACTGCATGAAGTGCTT+GGG 0.438105 5.2:-79267351 MS.gene81427:CDS
AACATCTGTGGGCTGACCTT+CGG 0.439150 5.2:+79267198 None:intergenic
CTTGTATATCTCTCGTATCT+GGG 0.448811 5.2:+79267100 None:intergenic
CATAACCCTGTCAAGGTTGA+AGG 0.449038 5.2:-79267759 MS.gene81427:CDS
TAGGCCATTCATTACTCAAA+CGG 0.450525 5.2:-79267679 MS.gene81427:CDS
TGCAGGGTGGGAATATGGTT+CGG 0.450729 5.2:-79267623 MS.gene81427:CDS
AACTGGGGTGAAGTGGGTTA+AGG 0.454696 5.2:-79266058 MS.gene81427:CDS
CCACAGATGTTAACAACAAA+TGG 0.455029 5.2:-79267186 MS.gene81427:CDS
CTCAGTATTGTGATTGGTAC+TGG 0.457635 5.2:+79267143 None:intergenic
ATTGTTGGTGGTGAAGCTAT+TGG 0.458790 5.2:-79269845 MS.gene81427:CDS
TGAGATGTATATGTTGTAGA+AGG 0.461719 5.2:+79268825 None:intergenic
AATGGAAACTCTGTTCCAAC+TGG 0.462215 5.2:-79267168 MS.gene81427:CDS
AGGCCATTCATTACTCAAAC+GGG 0.462455 5.2:-79267678 MS.gene81427:CDS
GGCATTACACCAGAAACAAT+GGG 0.462964 5.2:+79268609 None:intergenic
ACAAACCTGCAAAGGAAAAT+GGG 0.463372 5.2:+79264992 None:intergenic
AGAAGATCCTGCAGCAAGAT+GGG 0.463622 5.2:+79268674 None:intergenic
AAAATTTGGTGATGTAATTG+AGG 0.464766 5.2:+79267278 None:intergenic
ATATTCCCCGGCAAATCATC+AGG 0.467697 5.2:+79266018 None:intergenic
CCTTGAACCTGAAGGACATA+AGG 0.468335 5.2:+79268495 None:intergenic
ATGCCTCCCCATCTTGCTGC+AGG 0.468712 5.2:-79268681 MS.gene81427:CDS
TTGGCACTGCATGAAGTGCT+TGG 0.469894 5.2:-79267352 MS.gene81427:CDS
TCTCTGTGATGCCTGTGAAA+AGG 0.471396 5.2:-79267433 MS.gene81427:CDS
TTCTGAGCTGCTGTTACTTG+TGG 0.472825 5.2:+79267705 None:intergenic
AACATTCGAACAGCAGTTGT+TGG 0.473666 5.2:+79268759 None:intergenic
TTCATTACTCAAACGGGACC+TGG 0.476773 5.2:-79267672 MS.gene81427:CDS
CTGCTGATGCAACTGTATCA+AGG 0.483528 5.2:-79267734 MS.gene81427:CDS
CTCTCCGATGGAGGACGTGC+CGG 0.485673 5.2:-79270131 None:intergenic
GAATTCATAATAGAGTTGAT+TGG 0.486542 5.2:-79267371 MS.gene81427:CDS
TTTCTCCCCATGTGACTGCT+AGG 0.489377 5.2:+79268588 None:intergenic
GAGAGAAGCGAGGACGAAGC+TGG 0.490332 5.2:-79269900 MS.gene81427:CDS
CATTTGTTGTTAACATCTGT+GGG 0.495351 5.2:+79267187 None:intergenic
CTCTAATGACTGATGGCTGC+AGG 0.498012 5.2:+79267394 None:intergenic
CTGCAGCCATCAGTCATTAG+AGG 0.498511 5.2:-79267393 MS.gene81427:CDS
TATTCCCACCCTGCAACGGC+TGG 0.501073 5.2:+79267631 None:intergenic
ATAGCTCACATGCTGTAGAA+TGG 0.501093 5.2:-79266639 MS.gene81427:CDS
TTACTCATATAATCTCTTGA+CGG 0.504323 5.2:+79267510 None:intergenic
ACCTTGACAGGGTTATGAGC+AGG 0.504718 5.2:+79267765 None:intergenic
CCACAGTTTAAAGTTACTGC+AGG 0.508542 5.2:-79268531 MS.gene81427:CDS
CAGAAGATCCTGCAGCAAGA+TGG 0.511296 5.2:+79268673 None:intergenic
CTGCAGTAACTTTAAACTGT+GGG 0.511405 5.2:+79268532 None:intergenic
TTCTCAGCAATCGACATCTT+CGG 0.512043 5.2:+79269758 None:intergenic
AAGTTACTGCAGGATTGAGT+GGG 0.513481 5.2:-79268521 MS.gene81427:CDS
GTTTAAATTTATCATATGGA+AGG 0.514272 5.2:+79265068 None:intergenic
AGTTGAGAATGCAGTGTCAC+AGG 0.514317 5.2:-79266851 MS.gene81427:CDS
AATTTGGTTGTGCAGCATCT+AGG 0.516895 5.2:+79266719 None:intergenic
CCGCCACTGGAGATTGAAAA+CGG 0.520193 5.2:-79270088 MS.gene81427:CDS
GAGCAAGAAGGCGAAGGTGG+AGG 0.520743 5.2:-79270038 MS.gene81427:CDS
TTCAATGCTAGATGAAATGT+TGG 0.520996 5.2:+79267074 None:intergenic
AGCTCAACCTCAACAGCAGT+TGG 0.521719 5.2:+79269926 None:intergenic
TCAAACAAACACCGGTGGAA+TGG 0.521960 5.2:-79268796 MS.gene81427:CDS
GACGCCATGGAAACTGTAGA+AGG 0.525946 5.2:+79268705 None:intergenic
TGCACCAGCCGTTGCAGGGT+GGG 0.526817 5.2:-79267635 MS.gene81427:CDS
ACCGACGCTGGATCCGCCAC+TGG 0.529519 5.2:-79270101 MS.gene81427:CDS
GTTGAGCAAGAAGGCGAAGG+TGG 0.534577 5.2:-79270041 MS.gene81427:CDS
AATGCCTTCTACAGTTTCCA+TGG 0.538341 5.2:-79268709 MS.gene81427:CDS
TAGAAGGTGTTAGTTTGCCA+TGG 0.541388 5.2:+79266512 None:intergenic
ATGTCAAGGGATTGCTCCGA+AGG 0.543374 5.2:-79269870 MS.gene81427:CDS
ATTCCAAAACTGGGGTGAAG+TGG 0.544447 5.2:-79266065 MS.gene81427:CDS
ACCATATTCCCACCCTGCAA+CGG 0.548347 5.2:+79267627 None:intergenic
TCCACTGGCGTGCAGAGTGA+AGG 0.548439 5.2:-79266994 MS.gene81427:CDS
AGGCATTACACCAGAAACAA+TGG 0.552320 5.2:+79268608 None:intergenic
TCTTCCTAACATATCTGAGC+TGG 0.553003 5.2:-79266911 MS.gene81427:CDS
GCATTCTCAACTTGAGAACC+TGG 0.556429 5.2:+79266862 None:intergenic
AAAGTTACTGCAGGATTGAG+TGG 0.556480 5.2:-79268522 MS.gene81427:CDS
GCGGTTGAGCAAGAAGGCGA+AGG 0.557032 5.2:-79270044 MS.gene81427:CDS
AAGATGTCAATTTGGAGTTG+AGG 0.557635 5.2:-79265032 MS.gene81427:CDS
TCACCACCAACAATATCCTT+CGG 0.558219 5.2:+79269854 None:intergenic
TTCCAAAACTGGGGTGAAGT+GGG 0.558948 5.2:-79266064 MS.gene81427:CDS
AGGGTGTGGATCAGAGGTTA+GGG 0.559746 5.2:-79269790 MS.gene81427:CDS
GGGGTATTTGAGTCAAATGA+TGG 0.563344 5.2:+79267120 None:intergenic
ATTGCTCCGAAGGATATTGT+TGG 0.566615 5.2:-79269860 MS.gene81427:CDS
ACCAGATAACTTAGATCCGA+AGG 0.568578 5.2:-79267214 MS.gene81427:CDS
TCAGAGTGACTAGGTATCAA+AGG 0.568771 5.2:+79267597 None:intergenic
TGTAATGCCTAGCAGTCACA+TGG 0.570579 5.2:-79268595 MS.gene81427:CDS
ACCTTCACTCTGCACGCCAG+TGG 0.571113 5.2:+79266993 None:intergenic
AGAGGAGCGGTTGAGCAAGA+AGG 0.576752 5.2:-79270050 MS.gene81427:CDS
TGCTGATGCAACTGTATCAA+GGG 0.577821 5.2:-79267733 MS.gene81427:CDS
AAGCTGGCGGTACTATGTCA+AGG 0.578849 5.2:-79269884 MS.gene81427:CDS
AAGTGCTTGGGTTTAAGCGG+TGG 0.579160 5.2:-79267339 MS.gene81427:CDS
GTATTTGTTCGCAAAATCAA+AGG 0.580117 5.2:-79269735 MS.gene81427:intron
CGGAGAAGGAGAGCAACAAG+AGG 0.580490 5.2:-79270068 MS.gene81427:CDS
AATCAAAAGGAATCTCATGA+AGG 0.581954 5.2:-79266775 MS.gene81427:CDS
ATGCTAAGGGTGTGGATCAG+AGG 0.582901 5.2:-79269796 MS.gene81427:CDS
TGATGGCTCAGTATTGTGAT+TGG 0.583404 5.2:+79267137 None:intergenic
GATGCAACTGTATCAAGGGC+AGG 0.583435 5.2:-79267729 MS.gene81427:CDS
CCTGCAGTAACTTTAAACTG+TGG 0.583662 5.2:+79268531 None:intergenic
TGAATTCCTCTAATGACTGA+TGG 0.584828 5.2:+79267387 None:intergenic
CAGTTCCTTCAACCTTGACA+GGG 0.584947 5.2:+79267754 None:intergenic
GAAGGACTACACAAGGGCCT+CGG 0.586318 5.2:+79265086 None:intergenic
ATGGGGAGGCATAGACGCCA+TGG 0.586488 5.2:+79268692 None:intergenic
GCAGCTTGTAGTGCTTCCAC+TGG 0.588290 5.2:-79267009 MS.gene81427:CDS
ATAAAGAAACAAACCTGCAA+AGG 0.590380 5.2:+79264984 None:intergenic
ACTATGCACCAGCCGTTGCA+GGG 0.591052 5.2:-79267639 MS.gene81427:CDS
GCATTGATGGAGTAACATAT+AGG 0.592756 5.2:-79266564 MS.gene81427:CDS
TGGATTGAATGCTAAGGGTG+TGG 0.593379 5.2:-79269804 MS.gene81427:CDS
TCCAGCGTCGGTTCTGACAC+CGG 0.594083 5.2:+79270112 None:intergenic
GCTCCGAAGGATATTGTTGG+TGG 0.596231 5.2:-79269857 MS.gene81427:CDS
GACACCGGCACGTCCTCCAT+CGG 0.596510 5.2:+79270127 None:intergenic
GGAGAAAGAGAATTCGGAGG+CGG 0.597927 5.2:-79270017 MS.gene81427:CDS
CTGGAGATTGAAAACGGAGA+AGG 0.598024 5.2:-79270082 MS.gene81427:CDS
TGATCTTGGATTGAATGCTA+AGG 0.600024 5.2:-79269810 MS.gene81427:CDS
TGTGGGAAGATTCCAAAACT+GGG 0.603012 5.2:-79266074 MS.gene81427:CDS
TCCAGTGGCGGATCCAGCGT+CGG 0.603682 5.2:+79270100 None:intergenic
CAAGGATGACCAATATTCCC+CGG 0.605167 5.2:+79266006 None:intergenic
GGTCCCGTTTGAGTAATGAA+TGG 0.605708 5.2:+79267675 None:intergenic
AAAGAAGCCAACTGCTGTTG+AGG 0.606469 5.2:-79269933 MS.gene81427:CDS
GATCCTGCAGCAAGATGGGG+AGG 0.607645 5.2:+79268678 None:intergenic
TGAATACCAGCTGAATTAGA+GGG 0.607918 5.2:+79267255 None:intergenic
CTGGTTGATTGATATTGCGA+TGG 0.607966 5.2:+79268648 None:intergenic
GCCGGTGTCAGAACCGACGC+TGG 0.611187 5.2:-79270113 MS.gene81427:CDS
GGTTCTGGAACTAATACTGA+AGG 0.611301 5.2:-79266688 MS.gene81427:CDS
GGAGTAACATATAGGCTGCA+AGG 0.611649 5.2:-79266556 MS.gene81427:CDS
TCACATGCTGTAGAATGGAT+TGG 0.614992 5.2:-79266634 MS.gene81427:CDS
GCCTGCTCATAACCCTGTCA+AGG 0.615629 5.2:-79267766 MS.gene81427:CDS
ACGATTGTCAACCATTCCAC+CGG 0.621253 5.2:+79268785 None:intergenic
CCCTTTCAAACAAACACCGG+TGG 0.624793 5.2:-79268801 MS.gene81427:CDS
AGCTGGCGGTACTATGTCAA+GGG 0.626107 5.2:-79269883 MS.gene81427:CDS
GGAAATTACCTTGAACCTGA+AGG 0.627294 5.2:+79268487 None:intergenic
AGCTTCCTGATCATCCCACA+TGG 0.628655 5.2:-79267539 MS.gene81427:CDS
TAGTCACTCTGATATTGCAA+AGG 0.630150 5.2:-79267586 MS.gene81427:CDS
ACGATGGCGACGATGCGAAG+TGG 0.630685 5.2:-79269956 MS.gene81427:CDS
GATCTTGGATTGAATGCTAA+GGG 0.631026 5.2:-79269809 MS.gene81427:CDS
GAAGATCCTGCAGCAAGATG+GGG 0.631370 5.2:+79268675 None:intergenic
TTGTATATCTCTCGTATCTG+GGG 0.631520 5.2:+79267101 None:intergenic
TAGAAATGTATCAGAAAACA+AGG 0.631821 5.2:-79267790 MS.gene81427:CDS
TCATATGGAAGGACTACACA+AGG 0.639113 5.2:+79265079 None:intergenic
CCAGATACGAGAGATATACA+AGG 0.639717 5.2:-79267099 MS.gene81427:CDS
CAACCCTTTCAAACAAACAC+CGG 0.644891 5.2:-79268804 MS.gene81427:CDS
ATGCACCAGCCGTTGCAGGG+TGG 0.646972 5.2:-79267636 MS.gene81427:CDS
AAGGAGAGCAACAAGAGGAG+CGG 0.647384 5.2:-79270063 MS.gene81427:CDS
TGAGTCTGTATTGACCATGA+AGG 0.649233 5.2:+79267828 None:intergenic
GGAGGAGAAAGAGAATTCGG+AGG 0.649895 5.2:-79270020 MS.gene81427:CDS
GGAAATTTACAATCATCACC+AGG 0.650143 5.2:-79266880 MS.gene81427:CDS
TTGAGCTGATGAGAGAAGCG+AGG 0.651450 5.2:-79269910 MS.gene81427:CDS
ACATTTCTACCTAATGACAC+AGG 0.655198 5.2:+79267804 None:intergenic
TAATTGAGGATCGCATCACA+CGG 0.655580 5.2:+79267292 None:intergenic
CTGTAGAAGGCATTGATGTG+TGG 0.656663 5.2:+79268718 None:intergenic
ATGAAGTGCTTGGGTTTAAG+CGG 0.659398 5.2:-79267342 MS.gene81427:CDS
ACTTTCCTGATGATTTGCCG+GGG 0.664009 5.2:-79266023 MS.gene81427:CDS
TCGTTGACTTCAGATATACA+AGG 0.666673 5.2:+79265988 None:intergenic
CTTGACGGAGGAGTCCATGT+GGG 0.667564 5.2:+79267525 None:intergenic
GGCGGAATTGAAACGAGTGG+CGG 0.668581 5.2:-79269999 MS.gene81427:CDS
AGTTACTGCAGGATTGAGTG+GGG 0.674228 5.2:-79268520 MS.gene81427:CDS
TCTTGACGGAGGAGTCCATG+TGG 0.677184 5.2:+79267524 None:intergenic
GTAATGCCTAGCAGTCACAT+GGG 0.677357 5.2:-79268594 MS.gene81427:CDS
CTCATATAATCTCTTGACGG+AGG 0.678019 5.2:+79267513 None:intergenic
TTTGCAATATCAGAGTGACT+AGG 0.684493 5.2:+79267588 None:intergenic
GGAGGCGGAATTGAAACGAG+TGG 0.684533 5.2:-79270002 MS.gene81427:CDS
GCATTACACCAGAAACAATG+GGG 0.686510 5.2:+79268610 None:intergenic
GAAATGGCTAGTTCTATCCG+AGG 0.698577 5.2:-79265103 MS.gene81427:CDS
AGAAGCGAGGACGAAGCTGG+CGG 0.699972 5.2:-79269897 MS.gene81427:CDS
TAATGCCTAGCAGTCACATG+GGG 0.703271 5.2:-79268593 MS.gene81427:CDS
GAGTGACTAGGTATCAAAGG+AGG 0.704439 5.2:+79267600 None:intergenic
CATTACACCAGAAACAATGG+GGG 0.706770 5.2:+79268611 None:intergenic
GTGGGAAGATTCCAAAACTG+GGG 0.708638 5.2:-79266073 MS.gene81427:CDS
TGATTGGTACTGGAACCAGT+TGG 0.722677 5.2:+79267153 None:intergenic
GTGTGAGCTCACTGTCAGTG+AGG 0.735809 5.2:-79267469 MS.gene81427:CDS
CATATGGAAGGACTACACAA+GGG 0.743406 5.2:+79265080 None:intergenic
TTGTATATCTGAAGTCAACG+AGG 0.762476 5.2:-79265986 MS.gene81427:intron
ATTACACCAGAAACAATGGG+GGG 0.773168 5.2:+79268612 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTAATGATTAATGAT+TGG - chr5.2:79268913-79268932 MS.gene81427:intron 10.0%
!! TTTATATCTATAAATTCATA+TGG - chr5.2:79269775-79269794 MS.gene81427:CDS 10.0%
!! CTACAAATAATATAAAATGA+AGG + chr5.2:79267017-79267036 None:intergenic 15.0%
!! CTTTATTATTAGTAATCAAA+AGG - chr5.2:79268306-79268325 MS.gene81427:intron 15.0%
!! TAATCTTAAATTACCTTATT+GGG - chr5.2:79266041-79266060 MS.gene81427:CDS 15.0%
!! TTAATCTTAAATTACCTTAT+TGG - chr5.2:79266040-79266059 MS.gene81427:CDS 15.0%
!!! CTTCATTTTATATTATTTGT+AGG - chr5.2:79267015-79267034 MS.gene81427:CDS 15.0%
!!! GTAGTTTTTTCTTTTTAATT+GGG - chr5.2:79265764-79265783 MS.gene81427:intron 15.0%
!!! TAATTTAAGATTAAAATGAG+TGG + chr5.2:79266034-79266053 None:intergenic 15.0%
!!! TAGTTTTTTCTTTTTAATTG+GGG - chr5.2:79265765-79265784 MS.gene81427:intron 15.0%
!!! TCTTGTTTAAATTTATCATA+TGG + chr5.2:79270033-79270052 None:intergenic 15.0%
!!! TGTAGTTTTTTCTTTTTAAT+TGG - chr5.2:79265763-79265782 MS.gene81427:intron 15.0%
!!! TTTTTAGTTAATAGTGTATT+GGG - chr5.2:79265609-79265628 MS.gene81427:intron 15.0%
!!! TTTTTTAGTTAATAGTGTAT+TGG - chr5.2:79265608-79265627 MS.gene81427:intron 15.0%
!! AATATATCATCGTATGATTT+GGG + chr5.2:79269637-79269656 None:intergenic 20.0%
!! ATGTATGTAGTCTTTATTAT+AGG + chr5.2:79268735-79268754 None:intergenic 20.0%
!! GTTTAAATTTATCATATGGA+AGG + chr5.2:79270029-79270048 None:intergenic 20.0%
!! TATTTACATAGATGACATAT+GGG + chr5.2:79269367-79269386 None:intergenic 20.0%
!!! AATATTTTGTGTTAAATAGG+CGG - chr5.2:79265875-79265894 MS.gene81427:intron 20.0%
!!! AATTTTAATCCCTTGATTAT+AGG + chr5.2:79269748-79269767 None:intergenic 20.0%
!!! AGTTTTTTCTTTTTAATTGG+GGG - chr5.2:79265766-79265785 MS.gene81427:intron 20.0%
!!! ATTTTAATCCCTTGATTATA+GGG + chr5.2:79269747-79269766 None:intergenic 20.0%
!!! CACAATATTTTGTGTTAAAT+AGG - chr5.2:79265872-79265891 MS.gene81427:intron 20.0%
!!! CTATCTTTTTTATTTCTAGA+TGG - chr5.2:79266223-79266242 MS.gene81427:intron 20.0%
!!! TGTAAATCTTCATTTAAAAC+TGG - chr5.2:79269151-79269170 MS.gene81427:intron 20.0%
!!! TTTTAGTTAATAGTGTATTG+GGG - chr5.2:79265610-79265629 MS.gene81427:intron 20.0%
! AAAAAAGATAGCAGAAGAAA+CGG + chr5.2:79266214-79266233 None:intergenic 25.0%
! AAACCACAATAGTAATTGTA+AGG + chr5.2:79268890-79268909 None:intergenic 25.0%
! AATTGAATGAACCTAGTAAT+TGG - chr5.2:79268759-79268778 MS.gene81427:CDS 25.0%
! AGATTTAATCCCTATAATCA+AGG - chr5.2:79269735-79269754 MS.gene81427:intron 25.0%
! AGTTATAATCCCTTGATTAT+AGG + chr5.2:79269452-79269471 None:intergenic 25.0%
! ATATACAATGTTGTCAATTG+CGG - chr5.2:79265530-79265549 MS.gene81427:intron 25.0%
! ATTCAATAACAAATTCCAGT+TGG - chr5.2:79269528-79269547 MS.gene81427:intron 25.0%
! ATTTACCTATGAAATTGCAA+AGG - chr5.2:79268823-79268842 MS.gene81427:CDS 25.0%
! CACAAAATATTGTGAAATAC+CGG + chr5.2:79265866-79265885 None:intergenic 25.0%
! CTATTTACATAGATGACATA+TGG + chr5.2:79269368-79269387 None:intergenic 25.0%
! GAATATATCATCGTATGATT+TGG + chr5.2:79269638-79269657 None:intergenic 25.0%
! GATTTAATCCCTATAATCAA+GGG - chr5.2:79269736-79269755 MS.gene81427:CDS 25.0%
! GTAACAAGAAATAAACTGAA+AGG + chr5.2:79266012-79266031 None:intergenic 25.0%
! GTTATAATCCCTTGATTATA+GGG + chr5.2:79269451-79269470 None:intergenic 25.0%
! TAAGCAAAAATCCAATTACT+AGG + chr5.2:79268773-79268792 None:intergenic 25.0%
! TAATAGTGATAGAGTTGAAA+TGG - chr5.2:79269975-79269994 MS.gene81427:CDS 25.0%
! TAGAAATGTATCAGAAAACA+AGG - chr5.2:79267304-79267323 MS.gene81427:CDS 25.0%
! TTACTCATATAATCTCTTGA+CGG + chr5.2:79267587-79267606 None:intergenic 25.0%
! TTCAATAACAAATTCCAGTT+GGG - chr5.2:79269529-79269548 MS.gene81427:intron 25.0%
! TTTACCTATGAAATTGCAAA+GGG - chr5.2:79268824-79268843 MS.gene81427:CDS 25.0%
! TTTAGTTAATAGTGTATTGG+GGG - chr5.2:79265611-79265630 MS.gene81427:intron 25.0%
!! ACATGGACTGAAAATTAAAT+AGG + chr5.2:79269003-79269022 None:intergenic 25.0%
!! GAATTCATAATAGAGTTGAT+TGG - chr5.2:79267723-79267742 MS.gene81427:CDS 25.0%
!! TTCATTTCCTTATTTCATCT+AGG - chr5.2:79269655-79269674 MS.gene81427:intron 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG - chr5.2:79268783-79268802 MS.gene81427:CDS 25.0%
!!! AAAATTTGGTGATGTAATTG+AGG + chr5.2:79267819-79267838 None:intergenic 25.0%
!!! ATTTAATTTTCAGTCCATGT+GGG - chr5.2:79269003-79269022 MS.gene81427:intron 25.0%
!!! ATTTGTTGTTTATGTCATGT+GGG - chr5.2:79266156-79266175 MS.gene81427:intron 25.0%
!!! GTTTTTTCTTTTTAATTGGG+GGG - chr5.2:79265767-79265786 MS.gene81427:intron 25.0%
!!! TATTTAATTTTCAGTCCATG+TGG - chr5.2:79269002-79269021 MS.gene81427:intron 25.0%
!!! TCTTCTTTTTTCTTTGTTGA+AGG - chr5.2:79269942-79269961 MS.gene81427:CDS 25.0%
!!! TCTTTTTTATTTCTAGATGG+AGG - chr5.2:79266226-79266245 MS.gene81427:intron 25.0%
AACCTGAAAGTTCAATACAT+TGG - chr5.2:79266873-79266892 MS.gene81427:CDS 30.0%
AAGGAGAAAATACAACTGAA+GGG + chr5.2:79266998-79267017 None:intergenic 30.0%
AATCAAAAGGAATCTCATGA+AGG - chr5.2:79268319-79268338 MS.gene81427:intron 30.0%
AATGACAGAAGATGTCAATT+TGG - chr5.2:79270054-79270073 MS.gene81427:CDS 30.0%
AATTGCATAAGAAGTAGCAA+AGG + chr5.2:79265740-79265759 None:intergenic 30.0%
AGAAAACATCAAGCAACATA+TGG + chr5.2:79269914-79269933 None:intergenic 30.0%
AGTTGAATCCCTATAATCAA+GGG - chr5.2:79269440-79269459 MS.gene81427:intron 30.0%
ATAAAGAAACAAACCTGCAA+AGG + chr5.2:79270113-79270132 None:intergenic 30.0%
ATCATCTACAGTAGTTTGAT+TGG - chr5.2:79269841-79269860 MS.gene81427:CDS 30.0%
CAAGTGTGAAAATTTGTCAT+TGG - chr5.2:79269221-79269240 MS.gene81427:intron 30.0%
CTAAACTGTAGCAAATTCAT+TGG - chr5.2:79267220-79267239 MS.gene81427:CDS 30.0%
CTATAAATTCATATGGCTGA+AGG - chr5.2:79269782-79269801 MS.gene81427:CDS 30.0%
CTCTCAGTCATAAGAATTTA+TGG + chr5.2:79269492-79269511 None:intergenic 30.0%
GAACCTTACAATTACTATTG+TGG - chr5.2:79268884-79268903 MS.gene81427:intron 30.0%
GTATTTGTTCGCAAAATCAA+AGG - chr5.2:79265359-79265378 MS.gene81427:intron 30.0%
GTGTAGCATTATCATTTGAT+TGG + chr5.2:79269871-79269890 None:intergenic 30.0%
TAAGCAAAAATCCACTTTCT+AGG - chr5.2:79268684-79268703 MS.gene81427:CDS 30.0%
TACTCTAAACAACTGTTGAT+TGG - chr5.2:79269302-79269321 MS.gene81427:intron 30.0%
TATATAATTCTGATGCCATC+AGG - chr5.2:79269402-79269421 MS.gene81427:intron 30.0%
TATTGAATGAACCTAGAAAG+TGG + chr5.2:79268698-79268717 None:intergenic 30.0%
TCTCAAAAACGAAGATATAG+AGG + chr5.2:79265681-79265700 None:intergenic 30.0%
TGAGATGTATATGTTGTAGA+AGG + chr5.2:79266272-79266291 None:intergenic 30.0%
TGCTGAACAAATAGATTCTA+AGG - chr5.2:79268126-79268145 MS.gene81427:intron 30.0%
TGGCATCAGAATTATATACA+AGG + chr5.2:79269400-79269419 None:intergenic 30.0%
TTAAATAGGAACAAGTCTCT+TGG + chr5.2:79268989-79269008 None:intergenic 30.0%
TTACTTGCCTAGATGAAATA+AGG + chr5.2:79269665-79269684 None:intergenic 30.0%
TTCAATACATTGGTGTATCT+AGG - chr5.2:79266883-79266902 MS.gene81427:CDS 30.0%
TTCAATGCTAGATGAAATGT+TGG + chr5.2:79268023-79268042 None:intergenic 30.0%
TTTCAGACTCTTGAAAAACA+AGG + chr5.2:79266957-79266976 None:intergenic 30.0%
! AATGACATGATTTTGCACAA+GGG + chr5.2:79268945-79268964 None:intergenic 30.0%
! TAATGACATGATTTTGCACA+AGG + chr5.2:79268946-79268965 None:intergenic 30.0%
! TGCGGATTGTAGAAAAATAA+TGG - chr5.2:79265548-79265567 MS.gene81427:intron 30.0%
!! AGATTCAGAAGTATCTTTAC+AGG + chr5.2:79268158-79268177 None:intergenic 30.0%
!! CATTTGTTGTTAACATCTGT+GGG + chr5.2:79267910-79267929 None:intergenic 30.0%
!! GATTTGTTGTTTATGTCATG+TGG - chr5.2:79266155-79266174 MS.gene81427:intron 30.0%
!!! ATGGGTTTTTAACTTTCTAC+TGG - chr5.2:79267064-79267083 MS.gene81427:CDS 30.0%
!!! TGGGTTTTTAACTTTCTACT+GGG - chr5.2:79267065-79267084 MS.gene81427:CDS 30.0%
AAAATACAACTGAAGGGAGA+GGG + chr5.2:79266992-79267011 None:intergenic 35.0%
AACAAACCTGCAAAGGAAAA+TGG + chr5.2:79270106-79270125 None:intergenic 35.0%
ACAAACCTGCAAAGGAAAAT+GGG + chr5.2:79270105-79270124 None:intergenic 35.0%
ACATTTCTACCTAATGACAC+AGG + chr5.2:79267293-79267312 None:intergenic 35.0%
ACTAACACCTTCTAAACTTC+AGG - chr5.2:79268591-79268610 MS.gene81427:CDS 35.0%
ATATCTGAGCTGGCTAAAAA+TGG - chr5.2:79268193-79268212 MS.gene81427:intron 35.0%
ATCAAAATGTTCCCACTGTA+TGG - chr5.2:79266709-79266728 MS.gene81427:CDS 35.0%
ATGTTCAAAACACCATACAG+TGG + chr5.2:79266724-79266743 None:intergenic 35.0%
ATTTATACAAGTACACCCTC+CGG + chr5.2:79268805-79268824 None:intergenic 35.0%
CACCAATGTATTGAACTTTC+AGG + chr5.2:79266878-79266897 None:intergenic 35.0%
CATTCTATAATCTCTCCTGA+TGG + chr5.2:79269420-79269439 None:intergenic 35.0%
CCACAGATGTTAACAACAAA+TGG - chr5.2:79267908-79267927 MS.gene81427:intron 35.0%
CGCTATTTAACAACACTGTT+GGG - chr5.2:79265935-79265954 MS.gene81427:intron 35.0%
CTATTTAACAACACTGTTGG+GGG - chr5.2:79265937-79265956 MS.gene81427:intron 35.0%
CTGCAGTAACTTTAAACTGT+GGG + chr5.2:79266565-79266584 None:intergenic 35.0%
CTTGTATATCTCTCGTATCT+GGG + chr5.2:79267997-79268016 None:intergenic 35.0%
GAAGGAGAAAATACAACTGA+AGG + chr5.2:79266999-79267018 None:intergenic 35.0%
GAGTTGAATCCCTATAATCA+AGG - chr5.2:79269439-79269458 MS.gene81427:intron 35.0%
GATCTTGGATTGAATGCTAA+GGG - chr5.2:79265285-79265304 MS.gene81427:intron 35.0%
GCAGATTTCACACATATGTT+TGG + chr5.2:79268067-79268086 None:intergenic 35.0%
GCTATTTAACAACACTGTTG+GGG - chr5.2:79265936-79265955 MS.gene81427:intron 35.0%
GCTGAATTAGAGGGAAAATT+TGG + chr5.2:79267833-79267852 None:intergenic 35.0%
GCTTTGGTATTAACAACTTC+TGG + chr5.2:79267538-79267557 None:intergenic 35.0%
GGAAATTTACAATCATCACC+AGG - chr5.2:79268214-79268233 MS.gene81427:intron 35.0%
TAATTGCTCGCGTTAAGTAT+TGG - chr5.2:79265978-79265997 MS.gene81427:intron 35.0%
TAGGCCATTCATTACTCAAA+CGG - chr5.2:79267415-79267434 MS.gene81427:CDS 35.0%
TAGTCACTCTGATATTGCAA+AGG - chr5.2:79267508-79267527 MS.gene81427:CDS 35.0%
TATGCCCTTTGCAATTTCAT+AGG + chr5.2:79268831-79268850 None:intergenic 35.0%
TATTTAACAACACTGTTGGG+GGG - chr5.2:79265938-79265957 MS.gene81427:intron 35.0%
TCATCAATCCCATATTCCAA+GGG - chr5.2:79266640-79266659 MS.gene81427:CDS 35.0%
TGAATACCAGCTGAATTAGA+GGG + chr5.2:79267842-79267861 None:intergenic 35.0%
TGAATTCCTCTAATGACTGA+TGG + chr5.2:79267710-79267729 None:intergenic 35.0%
TGACATTTCAGTCATAGAAG+TGG - chr5.2:79267176-79267195 MS.gene81427:CDS 35.0%
TGATCTTGGATTGAATGCTA+AGG - chr5.2:79265284-79265303 MS.gene81427:intron 35.0%
TGCATAGTAGACATATTTCC+AGG + chr5.2:79267443-79267462 None:intergenic 35.0%
TGTGAGTTGCGATAATGAAT+TGG + chr5.2:79269203-79269222 None:intergenic 35.0%
TGTGGAAATTGGAGAAAGTA+TGG - chr5.2:79267045-79267064 MS.gene81427:CDS 35.0%
TGTTCAAAACACCATACAGT+GGG + chr5.2:79266723-79266742 None:intergenic 35.0%
TTATTTGTAGGTGAACGTTG+TGG - chr5.2:79267027-79267046 MS.gene81427:CDS 35.0%
TTCACACATATGTTTGGATC+AGG + chr5.2:79268061-79268080 None:intergenic 35.0%
TTCTTTCGTAATCTAGCAGT+TGG - chr5.2:79268632-79268651 MS.gene81427:CDS 35.0%
TTGAATACCAGCTGAATTAG+AGG + chr5.2:79267843-79267862 None:intergenic 35.0%
TTGTATATCTCTCGTATCTG+GGG + chr5.2:79267996-79268015 None:intergenic 35.0%
TTTGCAATATCAGAGTGACT+AGG + chr5.2:79267509-79267528 None:intergenic 35.0%
! AAGATGTCAATTTGGAGTTG+AGG - chr5.2:79270062-79270081 MS.gene81427:CDS 35.0%
! AATTTTCCCTCTAATTCAGC+TGG - chr5.2:79267833-79267852 MS.gene81427:CDS 35.0%
! CCAACAGTGTTGTTAAATAG+CGG + chr5.2:79265937-79265956 None:intergenic 35.0%
! CGCGTCTTTTTCTTCTTAAA+TGG - chr5.2:79269174-79269193 MS.gene81427:intron 35.0%
! CTAAACAACTGTTGATTGGT+TGG - chr5.2:79269306-79269325 MS.gene81427:intron 35.0%
! GCATTGATGGAGTAACATAT+AGG - chr5.2:79268530-79268549 MS.gene81427:CDS 35.0%
! GTGGAAATTGGAGAAAGTAT+GGG - chr5.2:79267046-79267065 MS.gene81427:CDS 35.0%
! TTGTATATCTGAAGTCAACG+AGG - chr5.2:79269108-79269127 MS.gene81427:intron 35.0%
!! AAGATGAGGATAAGAGTGTT+AGG - chr5.2:79265713-79265732 MS.gene81427:intron 35.0%
!! CCATTTGTTGTTAACATCTG+TGG + chr5.2:79267911-79267930 None:intergenic 35.0%
!! GGTTCTAAACGATAAGTAAG+AGG + chr5.2:79269893-79269912 None:intergenic 35.0%
!! TCGTTGACTTCAGATATACA+AGG + chr5.2:79269109-79269128 None:intergenic 35.0%
!! TGTATGGTGTTTTGAACATG+TGG - chr5.2:79266725-79266744 MS.gene81427:CDS 35.0%
AAAGTTACTGCAGGATTGAG+TGG - chr5.2:79266572-79266591 MS.gene81427:CDS 40.0%
AACATTCGAACAGCAGTTGT+TGG + chr5.2:79266338-79266357 None:intergenic 40.0%
AAGCCTTTGCCTCCAAAATA+TGG - chr5.2:79267779-79267798 MS.gene81427:CDS 40.0%
AAGTTACTGCAGGATTGAGT+GGG - chr5.2:79266573-79266592 MS.gene81427:CDS 40.0%
AATGCCTTCTACAGTTTCCA+TGG - chr5.2:79266385-79266404 MS.gene81427:intron 40.0%
AATGGAAACTCTGTTCCAAC+TGG - chr5.2:79267926-79267945 MS.gene81427:intron 40.0%
AATTGCAGTGTATGTGTTGC+TGG - chr5.2:79265442-79265461 MS.gene81427:intron 40.0%
AATTTGGTTGTGCAGCATCT+AGG + chr5.2:79268378-79268397 None:intergenic 40.0%
ACAACTTGCGTTTCCTGTTT+AGG - chr5.2:79268860-79268879 MS.gene81427:intron 40.0%
ACCAGATAACTTAGATCCGA+AGG - chr5.2:79267880-79267899 MS.gene81427:intron 40.0%
ACCTTCGGATCTAAGTTATC+TGG + chr5.2:79267884-79267903 None:intergenic 40.0%
AGGCATTACACCAGAAACAA+TGG + chr5.2:79266489-79266508 None:intergenic 40.0%
AGGCCATTCATTACTCAAAC+GGG - chr5.2:79267416-79267435 MS.gene81427:CDS 40.0%
ATAGCTCACATGCTGTAGAA+TGG - chr5.2:79268455-79268474 MS.gene81427:intron 40.0%
ATGTGGGAAGATTCCAAAAC+TGG - chr5.2:79269019-79269038 MS.gene81427:intron 40.0%
ATTACACCAGAAACAATGGG+GGG + chr5.2:79266485-79266504 None:intergenic 40.0%
ATTGCTCCGAAGGATATTGT+TGG - chr5.2:79265234-79265253 MS.gene81427:intron 40.0%
ATTGTAAGGTTCGCCTAAAC+AGG + chr5.2:79268876-79268895 None:intergenic 40.0%
CAACCCTTTCAAACAAACAC+CGG - chr5.2:79266290-79266309 MS.gene81427:intron 40.0%
CATATGGAAGGACTACACAA+GGG + chr5.2:79270017-79270036 None:intergenic 40.0%
CATCAATCCCATATTCCAAG+GGG - chr5.2:79266641-79266660 MS.gene81427:CDS 40.0%
CATTACACCAGAAACAATGG+GGG + chr5.2:79266486-79266505 None:intergenic 40.0%
CCAAATTCTGTTAGAGGTTC+TGG - chr5.2:79268391-79268410 MS.gene81427:intron 40.0%
CCAGAACCTCTAACAGAATT+TGG + chr5.2:79268394-79268413 None:intergenic 40.0%
CCAGATACGAGAGATATACA+AGG - chr5.2:79267995-79268014 MS.gene81427:intron 40.0%
CCGCTATTTAACAACACTGT+TGG - chr5.2:79265934-79265953 MS.gene81427:intron 40.0%
CCTGCAGTAACTTTAAACTG+TGG + chr5.2:79266566-79266585 None:intergenic 40.0%
CCTTGTATATCTCTCGTATC+TGG + chr5.2:79267998-79268017 None:intergenic 40.0%
CTCAGTATTGTGATTGGTAC+TGG + chr5.2:79267954-79267973 None:intergenic 40.0%
CTCATATAATCTCTTGACGG+AGG + chr5.2:79267584-79267603 None:intergenic 40.0%
CTCATCAATCCCATATTCCA+AGG - chr5.2:79266639-79266658 MS.gene81427:CDS 40.0%
CTGGTTGATTGATATTGCGA+TGG + chr5.2:79266449-79266468 None:intergenic 40.0%
CTTATTGGGAATGCACTTTG+CGG - chr5.2:79266055-79266074 MS.gene81427:CDS 40.0%
GAAAATACAACTGAAGGGAG+AGG + chr5.2:79266993-79267012 None:intergenic 40.0%
GAGTATGTGTTCAGAAGATG+AGG - chr5.2:79265699-79265718 MS.gene81427:intron 40.0%
GCACAACCAAATTCTGTTAG+AGG - chr5.2:79268385-79268404 MS.gene81427:intron 40.0%
GCATTACACCAGAAACAATG+GGG + chr5.2:79266487-79266506 None:intergenic 40.0%
GCTATAGCGCAACAGAATAA+CGG + chr5.2:79265659-79265678 None:intergenic 40.0%
GGAAATTACCTTGAACCTGA+AGG + chr5.2:79266610-79266629 None:intergenic 40.0%
GGCATTACACCAGAAACAAT+GGG + chr5.2:79266488-79266507 None:intergenic 40.0%
TAACAGCAGCTCAGAACATT+AGG - chr5.2:79267396-79267415 MS.gene81427:CDS 40.0%
TAATTGAGGATCGCATCACA+CGG + chr5.2:79267805-79267824 None:intergenic 40.0%
TACCAATCTTGCTGCATTGA+TGG - chr5.2:79268517-79268536 MS.gene81427:CDS 40.0%
TAGGTGAACGTTGTGGAAAT+TGG - chr5.2:79267034-79267053 MS.gene81427:CDS 40.0%
TATGGGATTGATGAGAAGCT+TGG + chr5.2:79266634-79266653 None:intergenic 40.0%
TCACATGCTGTAGAATGGAT+TGG - chr5.2:79268460-79268479 MS.gene81427:intron 40.0%
TCACCACCAACAATATCCTT+CGG + chr5.2:79265243-79265262 None:intergenic 40.0%
TCAGAGTGACTAGGTATCAA+AGG + chr5.2:79267500-79267519 None:intergenic 40.0%
TCATATGGAAGGACTACACA+AGG + chr5.2:79270018-79270037 None:intergenic 40.0%
TCATCTAGGCAAGTAATTCG+TGG - chr5.2:79269669-79269688 MS.gene81427:intron 40.0%
TCCACCTCAATAACCTCAAA+AGG + chr5.2:79266910-79266929 None:intergenic 40.0%
TCTTCCTAACATATCTGAGC+TGG - chr5.2:79268183-79268202 MS.gene81427:intron 40.0%
TGATGGCTCAGTATTGTGAT+TGG + chr5.2:79267960-79267979 None:intergenic 40.0%
TGCTGATGCAACTGTATCAA+GGG - chr5.2:79267361-79267380 MS.gene81427:CDS 40.0%
TGCTTATATTAGTGACCGCA+GGG + chr5.2:79268670-79268689 None:intergenic 40.0%
TGCTTATATTAGTGACCGGA+GGG - chr5.2:79268787-79268806 MS.gene81427:CDS 40.0%
TGGTTATATCATACACCCTG+CGG - chr5.2:79268652-79268671 MS.gene81427:CDS 40.0%
TGTGGGAAGATTCCAAAACT+GGG - chr5.2:79269020-79269039 MS.gene81427:intron 40.0%
TTAGCCAGCTCAGATATGTT+AGG + chr5.2:79268190-79268209 None:intergenic 40.0%
TTCTCAGCAATCGACATCTT+CGG + chr5.2:79265339-79265358 None:intergenic 40.0%
TTGCTTATATTAGTGACCGC+AGG + chr5.2:79268671-79268690 None:intergenic 40.0%
TTGCTTATATTAGTGACCGG+AGG - chr5.2:79268786-79268805 MS.gene81427:CDS 40.0%
TTGCTTGCCTGAAGTTTAGA+AGG + chr5.2:79268601-79268620 None:intergenic 40.0%
! AACTGTGGGTTTTCAACTCT+AGG + chr5.2:79266551-79266570 None:intergenic 40.0%
! AACTGTTGATTGGTTGGAGT+TGG - chr5.2:79269312-79269331 MS.gene81427:intron 40.0%
! ATGAAGTGCTTGGGTTTAAG+CGG - chr5.2:79267752-79267771 MS.gene81427:CDS 40.0%
! CAAGTGAAATCCCTTTTCAC+AGG + chr5.2:79267675-79267694 None:intergenic 40.0%
! CCACAGTTTAAAGTTACTGC+AGG - chr5.2:79266563-79266582 MS.gene81427:CDS 40.0%
! CTACTTTCCTGATGATTTGC+CGG - chr5.2:79269069-79269088 MS.gene81427:intron 40.0%
! GGGGTATTTGAGTCAAATGA+TGG + chr5.2:79267977-79267996 None:intergenic 40.0%
! GGTAGTGTGATTGATGATCT+TGG - chr5.2:79265270-79265289 MS.gene81427:intron 40.0%
! TACAACCCATTTTCCTTTGC+AGG - chr5.2:79270097-79270116 MS.gene81427:CDS 40.0%
! TACTTTCCTGATGATTTGCC+GGG - chr5.2:79269070-79269089 MS.gene81427:intron 40.0%
! TCTGGTTTCTTCTCTGAAGA+TGG + chr5.2:79267866-79267885 None:intergenic 40.0%
! TGAGTCTGTATTGACCATGA+AGG + chr5.2:79267269-79267288 None:intergenic 40.0%
!! AAGGAGCATTCACTGATGAT+TGG + chr5.2:79267250-79267269 None:intergenic 40.0%
!! ATTGTTGGTGGTGAAGCTAT+TGG - chr5.2:79265249-79265268 MS.gene81427:intron 40.0%
!! GGTTCTGGAACTAATACTGA+AGG - chr5.2:79268406-79268425 MS.gene81427:intron 40.0%
!! TAGAAGGTGTTAGTTTGCCA+TGG + chr5.2:79268585-79268604 None:intergenic 40.0%
!!! AGGTCCTTTTGAGGTTATTG+AGG - chr5.2:79266903-79266922 MS.gene81427:CDS 40.0%
!!! AGTTTTGGAATCTTCCCACA+TGG + chr5.2:79269020-79269039 None:intergenic 40.0%
!!! TCCTTTTGAGGTTATTGAGG+TGG - chr5.2:79266906-79266925 MS.gene81427:CDS 40.0%
!!! TGTTTTGGTGTTATCGACGA+TGG - chr5.2:79265122-79265141 MS.gene81427:CDS 40.0%
AAACCAGAAACGACCAAGGT+CGG - chr5.2:79269596-79269615 MS.gene81427:intron 45.0%
AAAGAAGCCAACTGCTGTTG+AGG - chr5.2:79265161-79265180 MS.gene81427:intron 45.0%
ACGATTGTCAACCATTCCAC+CGG + chr5.2:79266312-79266331 None:intergenic 45.0%
AGAAGATCCTGCAGCAAGAT+GGG + chr5.2:79266423-79266442 None:intergenic 45.0%
AGTTACTGCAGGATTGAGTG+GGG - chr5.2:79266574-79266593 MS.gene81427:CDS 45.0%
AGTTGAGAATGCAGTGTCAC+AGG - chr5.2:79268243-79268262 MS.gene81427:intron 45.0%
ATATTCCCCGGCAAATCATC+AGG + chr5.2:79269079-79269098 None:intergenic 45.0%
ATGCACTTTGCGGAGTTTGT+TGG - chr5.2:79266065-79266084 MS.gene81427:CDS 45.0%
ATTCCAAAACTGGGGTGAAG+TGG - chr5.2:79269029-79269048 MS.gene81427:intron 45.0%
CAAATTCAGCTACGCAACAG+TGG - chr5.2:79265832-79265851 MS.gene81427:intron 45.0%
CAAGGATGACCAATATTCCC+CGG + chr5.2:79269091-79269110 None:intergenic 45.0%
CAGTTCCTTCAACCTTGACA+GGG + chr5.2:79267343-79267362 None:intergenic 45.0%
CATAACCCTGTCAAGGTTGA+AGG - chr5.2:79267335-79267354 MS.gene81427:CDS 45.0%
CATCAGTGAATGCTCCTTCA+TGG - chr5.2:79267252-79267271 MS.gene81427:CDS 45.0%
CCACCGGTGTTTGTTTGAAA+GGG + chr5.2:79266296-79266315 None:intergenic 45.0%
CCTTGAACCTGAAGGACATA+AGG + chr5.2:79266602-79266621 None:intergenic 45.0%
CGCAAAGTGCATTCCCAATA+AGG + chr5.2:79266057-79266076 None:intergenic 45.0%
CTAGGCAATGCTACAGAAGA+TGG + chr5.2:79266533-79266552 None:intergenic 45.0%
CTCCATCAATGCAGCAAGAT+TGG + chr5.2:79268522-79268541 None:intergenic 45.0%
CTCTGTGATGCCTGTGAAAA+GGG - chr5.2:79267662-79267681 MS.gene81427:CDS 45.0%
CTGCTGATGCAACTGTATCA+AGG - chr5.2:79267360-79267379 MS.gene81427:CDS 45.0%
CTGGAGATTGAAAACGGAGA+AGG - chr5.2:79265012-79265031 MS.gene81427:CDS 45.0%
GAGTGACTAGGTATCAAAGG+AGG + chr5.2:79267497-79267516 None:intergenic 45.0%
GCATTCTCAACTTGAGAACC+TGG + chr5.2:79268235-79268254 None:intergenic 45.0%
GGAGTAACATATAGGCTGCA+AGG - chr5.2:79268538-79268557 MS.gene81427:CDS 45.0%
GGTCCCGTTTGAGTAATGAA+TGG + chr5.2:79267422-79267441 None:intergenic 45.0%
GGTGGAGGAGAAAGAGAATT+CGG - chr5.2:79265071-79265090 MS.gene81427:CDS 45.0%
GTAATGCCTAGCAGTCACAT+GGG - chr5.2:79266500-79266519 MS.gene81427:intron 45.0%
GTGGGAAGATTCCAAAACTG+GGG - chr5.2:79269021-79269040 MS.gene81427:intron 45.0%
GTTGGGTTCAAAGCTCACAT+CGG - chr5.2:79269546-79269565 MS.gene81427:intron 45.0%
TAATGCCTAGCAGTCACATG+GGG - chr5.2:79266501-79266520 MS.gene81427:intron 45.0%
TCAAACAAACACCGGTGGAA+TGG - chr5.2:79266298-79266317 MS.gene81427:intron 45.0%
TCCACCGGTGTTTGTTTGAA+AGG + chr5.2:79266297-79266316 None:intergenic 45.0%
TCTCTGTGATGCCTGTGAAA+AGG - chr5.2:79267661-79267680 MS.gene81427:CDS 45.0%
TGGATTGAATGCTAAGGGTG+TGG - chr5.2:79265290-79265309 MS.gene81427:intron 45.0%
TGTAATGCCTAGCAGTCACA+TGG - chr5.2:79266499-79266518 MS.gene81427:intron 45.0%
TTCATTACTCAAACGGGACC+TGG - chr5.2:79267422-79267441 MS.gene81427:CDS 45.0%
TTCCAAAACTGGGGTGAAGT+GGG - chr5.2:79269030-79269049 MS.gene81427:intron 45.0%
! ACTTTCCTGATGATTTGCCG+GGG - chr5.2:79269071-79269090 MS.gene81427:intron 45.0%
! CAGACTCAACCTGTGTCATT+AGG - chr5.2:79267281-79267300 MS.gene81427:CDS 45.0%
! CCTTATGTCCTTCAGGTTCA+AGG - chr5.2:79266599-79266618 MS.gene81427:CDS 45.0%
! GATGATTTGCCGGGGAATAT+TGG - chr5.2:79269079-79269098 MS.gene81427:intron 45.0%
! GGTGTATCTAGGTCCTTTTG+AGG - chr5.2:79266894-79266913 MS.gene81427:CDS 45.0%
! TCTCCGTTTTCAATCTCCAG+TGG + chr5.2:79265012-79265031 None:intergenic 45.0%
! TGATTGGTACTGGAACCAGT+TGG + chr5.2:79267944-79267963 None:intergenic 45.0%
! TGTTGTCGATTGTGGATGGT+GGG - chr5.2:79265793-79265812 MS.gene81427:intron 45.0%
! TTCTGAGCTGCTGTTACTTG+TGG + chr5.2:79267392-79267411 None:intergenic 45.0%
!! ACCTTGGTCGTTTCTGGTTT+GGG + chr5.2:79269596-79269615 None:intergenic 45.0%
!! ATCACACGGCCATATTTTGG+AGG + chr5.2:79267791-79267810 None:intergenic 45.0%
!! ATGTGAGCTTTGAACCCAAC+TGG + chr5.2:79269546-79269565 None:intergenic 45.0%
!! CTGTAGAAGGCATTGATGTG+TGG + chr5.2:79266379-79266398 None:intergenic 45.0%
!! GAAATGGCTAGTTCTATCCG+AGG - chr5.2:79269991-79270010 MS.gene81427:CDS 45.0%
!! GGGACACTAGGGTTTTATCA+GGG + chr5.2:79269576-79269595 None:intergenic 45.0%
!! GGTGTTTTGAACATGTGGTG+TGG - chr5.2:79266730-79266749 MS.gene81427:CDS 45.0%
!! GTTTCTGGTTTGGGACACTA+GGG + chr5.2:79269587-79269606 None:intergenic 45.0%
!! TGGGACACTAGGGTTTTATC+AGG + chr5.2:79269577-79269596 None:intergenic 45.0%
!! TGTGGATGGTGGGAAAATAG+CGG - chr5.2:79265803-79265822 MS.gene81427:intron 45.0%
AACCAGAAACGACCAAGGTC+GGG - chr5.2:79269597-79269616 MS.gene81427:intron 50.0%
AAGCTGGCGGTACTATGTCA+AGG - chr5.2:79265210-79265229 MS.gene81427:intron 50.0%
AAGGAGAGCAACAAGAGGAG+CGG - chr5.2:79265031-79265050 MS.gene81427:CDS 50.0%
AAGTGCTTGGGTTTAAGCGG+TGG - chr5.2:79267755-79267774 MS.gene81427:CDS 50.0%
ACCATATTCCCACCCTGCAA+CGG + chr5.2:79267470-79267489 None:intergenic 50.0%
ACCTTGACAGGGTTATGAGC+AGG + chr5.2:79267332-79267351 None:intergenic 50.0%
AGCTCAACCTCAACAGCAGT+TGG + chr5.2:79265171-79265190 None:intergenic 50.0%
AGCTGGCGGTACTATGTCAA+GGG - chr5.2:79265211-79265230 MS.gene81427:intron 50.0%
AGCTTCCTGATCATCCCACA+TGG - chr5.2:79267555-79267574 MS.gene81427:CDS 50.0%
AGGGTGTGGATCAGAGGTTA+GGG - chr5.2:79265304-79265323 MS.gene81427:intron 50.0%
ATGTCAAGGGATTGCTCCGA+AGG - chr5.2:79265224-79265243 MS.gene81427:intron 50.0%
CAATCCCATATTCCAAGGGG+TGG - chr5.2:79266644-79266663 MS.gene81427:CDS 50.0%
CAGAAGATCCTGCAGCAAGA+TGG + chr5.2:79266424-79266443 None:intergenic 50.0%
CCCTTTCAAACAAACACCGG+TGG - chr5.2:79266293-79266312 MS.gene81427:intron 50.0%
CCGCCACTGGAGATTGAAAA+CGG - chr5.2:79265006-79265025 MS.gene81427:CDS 50.0%
CTCTAATGACTGATGGCTGC+AGG + chr5.2:79267703-79267722 None:intergenic 50.0%
CTGCAGCCATCAGTCATTAG+AGG - chr5.2:79267701-79267720 MS.gene81427:CDS 50.0%
GAAGATCCTGCAGCAAGATG+GGG + chr5.2:79266422-79266441 None:intergenic 50.0%
GACGCCATGGAAACTGTAGA+AGG + chr5.2:79266392-79266411 None:intergenic 50.0%
GATGCAACTGTATCAAGGGC+AGG - chr5.2:79267365-79267384 MS.gene81427:CDS 50.0%
GCAGTTCCTTCAACCTTGAC+AGG + chr5.2:79267344-79267363 None:intergenic 50.0%
GCTCCGAAGGATATTGTTGG+TGG - chr5.2:79265237-79265256 MS.gene81427:intron 50.0%
GGAGAAAGAGAATTCGGAGG+CGG - chr5.2:79265077-79265096 MS.gene81427:CDS 50.0%
GGAGGAGAAAGAGAATTCGG+AGG - chr5.2:79265074-79265093 MS.gene81427:CDS 50.0%
GGGATTGATGAGAAGCTTGG+TGG + chr5.2:79266631-79266650 None:intergenic 50.0%
GGTTCAAAGCTCACATCGGT+TGG - chr5.2:79269550-79269569 MS.gene81427:intron 50.0%
GTGGGATGATCAGGAAGCTT+TGG + chr5.2:79267554-79267573 None:intergenic 50.0%
TCCACCACCCCTTGGAATAT+GGG + chr5.2:79266651-79266670 None:intergenic 50.0%
TCCCAAACCAGAAACGACCA+AGG - chr5.2:79269592-79269611 MS.gene81427:intron 50.0%
TGCAGGGTGGGAATATGGTT+CGG - chr5.2:79267471-79267490 MS.gene81427:CDS 50.0%
TGGATCAGGCTTCTCGTCAA+TGG + chr5.2:79268047-79268066 None:intergenic 50.0%
TTGAGCTGATGAGAGAAGCG+AGG - chr5.2:79265184-79265203 MS.gene81427:intron 50.0%
TTTCTCCCCATGTGACTGCT+AGG + chr5.2:79266509-79266528 None:intergenic 50.0%
! AACATCTGTGGGCTGACCTT+CGG + chr5.2:79267899-79267918 None:intergenic 50.0%
! AACCCACTTCACCCCAGTTT+TGG + chr5.2:79269035-79269054 None:intergenic 50.0%
! AAGGGTGTGGATCAGAGGTT+AGG - chr5.2:79265303-79265322 MS.gene81427:intron 50.0%
! ATGCTAAGGGTGTGGATCAG+AGG - chr5.2:79265298-79265317 MS.gene81427:intron 50.0%
! CCGTTTTCAATCTCCAGTGG+CGG + chr5.2:79265009-79265028 None:intergenic 50.0%
! CGCAACAGTGGTTCTATTGC+CGG - chr5.2:79265844-79265863 MS.gene81427:intron 50.0%
! CGCATCACACGGCCATATTT+TGG + chr5.2:79267794-79267813 None:intergenic 50.0%
! GCAGTGTTGTCGATTGTGGA+TGG - chr5.2:79265789-79265808 MS.gene81427:intron 50.0%
! GCATTTTTCACGTCCAGCCA+TGG - chr5.2:79268565-79268584 MS.gene81427:CDS 50.0%
! GTGTTGTCGATTGTGGATGG+TGG - chr5.2:79265792-79265811 MS.gene81427:intron 50.0%
! TGGCACTGCATGAAGTGCTT+GGG - chr5.2:79267743-79267762 MS.gene81427:CDS 50.0%
! TTGGCACTGCATGAAGTGCT+TGG - chr5.2:79267742-79267761 MS.gene81427:CDS 50.0%
!! AACTGGGGTGAAGTGGGTTA+AGG - chr5.2:79269036-79269055 MS.gene81427:intron 50.0%
!! ACGAGTGGCGGAGATTGTTT+TGG - chr5.2:79265107-79265126 MS.gene81427:CDS 50.0%
!! AGGTGTTAGTTTGCCATGGC+TGG + chr5.2:79268581-79268600 None:intergenic 50.0%
!! CGGCCATATTTTGGAGGCAA+AGG + chr5.2:79267785-79267804 None:intergenic 50.0%
!! CGTTTCTGGTTTGGGACACT+AGG + chr5.2:79269588-79269607 None:intergenic 50.0%
!! GACCTTGGTCGTTTCTGGTT+TGG + chr5.2:79269597-79269616 None:intergenic 50.0%
!! GTGGATGGTGGGAAAATAGC+GGG - chr5.2:79265804-79265823 MS.gene81427:intron 50.0%
AATGTACCTCCACCACCCCT+TGG + chr5.2:79266659-79266678 None:intergenic 55.0%
ACTATGCACCAGCCGTTGCA+GGG - chr5.2:79267455-79267474 MS.gene81427:CDS 55.0%
AGAGGAGCGGTTGAGCAAGA+AGG - chr5.2:79265044-79265063 MS.gene81427:CDS 55.0%
CGGAGAAGGAGAGCAACAAG+AGG - chr5.2:79265026-79265045 MS.gene81427:CDS 55.0%
CTCCACCACCCCTTGGAATA+TGG + chr5.2:79266652-79266671 None:intergenic 55.0%
CTTGACGGAGGAGTCCATGT+GGG + chr5.2:79267572-79267591 None:intergenic 55.0%
GAAGGACTACACAAGGGCCT+CGG + chr5.2:79270011-79270030 None:intergenic 55.0%
GCAGCTTGTAGTGCTTCCAC+TGG - chr5.2:79268085-79268104 MS.gene81427:intron 55.0%
GCCTGCTCATAACCCTGTCA+AGG - chr5.2:79267328-79267347 MS.gene81427:CDS 55.0%
GGAGGCGGAATTGAAACGAG+TGG - chr5.2:79265092-79265111 MS.gene81427:CDS 55.0%
GGAGTCCATGTGGGATGATC+AGG + chr5.2:79267563-79267582 None:intergenic 55.0%
GGCGGAATTGAAACGAGTGG+CGG - chr5.2:79265095-79265114 MS.gene81427:CDS 55.0%
GTGAGACCCCCCATTGTTTC+TGG - chr5.2:79266476-79266495 MS.gene81427:intron 55.0%
GTGTGAGCTCACTGTCAGTG+AGG - chr5.2:79267625-79267644 MS.gene81427:CDS 55.0%
GTTGAGCAAGAAGGCGAAGG+TGG - chr5.2:79265053-79265072 MS.gene81427:CDS 55.0%
TACTATGCACCAGCCGTTGC+AGG - chr5.2:79267454-79267473 MS.gene81427:CDS 55.0%
TCCCATATTCCAAGGGGTGG+TGG - chr5.2:79266647-79266666 MS.gene81427:CDS 55.0%
TCTTGACGGAGGAGTCCATG+TGG + chr5.2:79267573-79267592 None:intergenic 55.0%
TGGGGCTCCTTATGTCCTTC+AGG - chr5.2:79266592-79266611 MS.gene81427:CDS 55.0%
! CATATTCCAAGGGGTGGTGG+AGG - chr5.2:79266650-79266669 MS.gene81427:CDS 55.0%
ACCTTCACTCTGCACGCCAG+TGG + chr5.2:79268104-79268123 None:intergenic 60.0%
ACGATGGCGACGATGCGAAG+TGG - chr5.2:79265138-79265157 MS.gene81427:intron 60.0%
AGAAGCGAGGACGAAGCTGG+CGG - chr5.2:79265197-79265216 MS.gene81427:intron 60.0%
ATGCCTCCCCATCTTGCTGC+AGG - chr5.2:79266413-79266432 MS.gene81427:intron 60.0%
GAGAGAAGCGAGGACGAAGC+TGG - chr5.2:79265194-79265213 MS.gene81427:intron 60.0%
GAGCAAGAAGGCGAAGGTGG+AGG - chr5.2:79265056-79265075 MS.gene81427:CDS 60.0%
GATCCTGCAGCAAGATGGGG+AGG + chr5.2:79266419-79266438 None:intergenic 60.0%
GCCGTTGCAGGGTGGGAATA+TGG - chr5.2:79267466-79267485 MS.gene81427:CDS 60.0%
GCGGTTGAGCAAGAAGGCGA+AGG - chr5.2:79265050-79265069 MS.gene81427:CDS 60.0%
GGGGGGTCTCACTTCATTGC+TGG + chr5.2:79266468-79266487 None:intergenic 60.0%
GTCCCGACCTTGGTCGTTTC+TGG + chr5.2:79269602-79269621 None:intergenic 60.0%
TATTCCCACCCTGCAACGGC+TGG + chr5.2:79267466-79267485 None:intergenic 60.0%
TCCACTGGCGTGCAGAGTGA+AGG - chr5.2:79268100-79268119 MS.gene81427:intron 60.0%
! ATGGGGAGGCATAGACGCCA+TGG + chr5.2:79266405-79266424 None:intergenic 60.0%
! GGGGGCAGTGTTGTCGATTG+TGG - chr5.2:79265785-79265804 MS.gene81427:intron 60.0%
!! TAGTGCTGACGTCCCGACCT+TGG + chr5.2:79269612-79269631 None:intergenic 60.0%
!! TCCAGCGTCGGTTCTGACAC+CGG + chr5.2:79264985-79265004 None:intergenic 60.0%
ATGCACCAGCCGTTGCAGGG+TGG - chr5.2:79267458-79267477 MS.gene81427:CDS 65.0%
TGCACCAGCCGTTGCAGGGT+GGG - chr5.2:79267459-79267478 MS.gene81427:CDS 65.0%
!! TCCAGTGGCGGATCCAGCGT+CGG + chr5.2:79264997-79265016 None:intergenic 65.0%
ACCGACGCTGGATCCGCCAC+TGG - chr5.2:79264993-79265012 MS.gene81427:CDS 70.0%
! GCCGGTGTCAGAACCGACGC+TGG - chr5.2:79264981-79265000 MS.gene81427:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 79264970 79270146 79264970 ID=MS.gene81427
chr5.2 mRNA 79264970 79270146 79264970 ID=MS.gene81427.t1;Parent=MS.gene81427
chr5.2 exon 79269736 79270146 79269736 ID=MS.gene81427.t1.exon1;Parent=MS.gene81427.t1
chr5.2 CDS 79269736 79270146 79269736 ID=cds.MS.gene81427.t1;Parent=MS.gene81427.t1
chr5.2 exon 79268496 79268874 79268496 ID=MS.gene81427.t1.exon2;Parent=MS.gene81427.t1
chr5.2 CDS 79268496 79268874 79268496 ID=cds.MS.gene81427.t1;Parent=MS.gene81427.t1
chr5.2 exon 79266504 79267885 79266504 ID=MS.gene81427.t1.exon3;Parent=MS.gene81427.t1
chr5.2 CDS 79266504 79267885 79266504 ID=cds.MS.gene81427.t1;Parent=MS.gene81427.t1
chr5.2 exon 79265987 79266100 79265987 ID=MS.gene81427.t1.exon4;Parent=MS.gene81427.t1
chr5.2 CDS 79265987 79266100 79265987 ID=cds.MS.gene81427.t1;Parent=MS.gene81427.t1
chr5.2 exon 79264970 79265152 79264970 ID=MS.gene81427.t1.exon5;Parent=MS.gene81427.t1
chr5.2 CDS 79264970 79265152 79264970 ID=cds.MS.gene81427.t1;Parent=MS.gene81427.t1
Gene Sequence

>MS.gene81427

ATGGAGGACGTGCCGGTGTCAGAACCGACGCTGGATCCGCCACTGGAGATTGAAAACGGAGAAGGAGAGCAACAAGAGGAGCGGTTGAGCAAGAAGGCGAAGGTGGAGGAGAAAGAGAATTCGGAGGCGGAATTGAAACGAGTGGCGGAGATTGTTTTGGTGTTATCGACGATGGCGACGATGCGAAGTGGAAAGAAGCCAACTGCTGTTGAGGTTGAGCTGATGAGAGAAGCGAGGACGAAGCTGGCGGTACTATGTCAAGGGATTGCTCCGAAGGATATTGTTGGTGGTGAAGCTATTGGTAGTGTGATTGATGATCTTGGATTGAATGCTAAGGGTGTGGATCAGAGGTTAGGGTTTCGAGTGCCGAAGATGTCGATTGCTGAGAAGTATTTGTTCGCAAAATCAAAGGTATTTCTTAATTCAATTGATTTCAATTTTTATGAACTATTGATTGTGTAGAATCAGAATTAATTGCAGTGTATGTGTTGCTGGTTGTTTTGAATAATTGCTTAGTGTGATAGTGAAACATTGTAATAGATGCATAAGTGACATTATGTATATACAATGTTGTCAATTGCGGATTGTAGAAAAATAATGGATTGTTCAAATTCAGTATAGTCGCTATTCGACAATATTTTTTTAGTTAATAGTGTATTGGGGGACAGTAGCAGTTTGTTCAAATTCCGTTATTCTGTTGCGCTATAGCCTCTATATCTTCGTTTTTGAGAGTATGTGTTCAGAAGATGAGGATAAGAGTGTTAGGTCCTTTGCTACTTCTTATGCAATTATTTGTAGTTTTTTCTTTTTAATTGGGGGGCAGTGTTGTCGATTGTGGATGGTGGGAAAATAGCGGGTTGTTCAAATTCAGCTACGCAACAGTGGTTCTATTGCCGGTATTTCACAATATTTTGTGTTAAATAGGCGGAACAAAAGCGATTTCTCAAATTTTGCTATGCAATAGCCGCTATTTAACAACACTGTTGGGGGGATTATTTAATACTACTTTAATTGCTCGCGTTAAGTATTGGATTATTTTCCTTTCAGTTTATTTCTTGTTACCACTCATTTTAATCTTAAATTACCTTATTGGGAATGCACTTTGCGGAGTTTGTTGGAAAGATGATGAACTCTGCTAATGTGAAAAGCTTTTTACTTTTTTGTTTTTACATAAATAAGAGCATTGATTTGTTGTTTATGTCATGTGGGTAATGTTGTTAATGTGAAATGTTTGTTCTTTACCGTTTCTTCTGCTATCTTTTTTATTTCTAGATGGAGGAATCAAAGAAATTCGCTGCACCTTCTACAACATATACATCTCAACCCTTTCAAACAAACACCGGTGGAATGGTTGACAATCGTGTACCAACAACTGCTGTTCGAATGTTTACGTCTGATAAATCAAACCACACATCAATGCCTTCTACAGTTTCCATGGCGTCTATGCCTCCCCATCTTGCTGCAGGATCTTCTGCACCATCGCAATATCAATCAACCAGCAATGAAGTGAGACCCCCCATTGTTTCTGGTGTAATGCCTAGCAGTCACATGGGGAGAAATCCATCTTCTGTAGCATTGCCTAGAGTTGAAAACCCACAGTTTAAAGTTACTGCAGGATTGAGTGGGGCTCCTTATGTCCTTCAGGTTCAAGGTAATTTCCACCAAGCTTCTCATCAATCCCATATTCCAAGGGGTGGTGGAGGTACATTTACTATTGATGAATTGACTAATACTGCAATATCAAAATGTTCCCACTGTATGGTGTTTTGAACATGTGGTGTGGACTTGTACTTTGTTTTGCTGTAATTCTTTTTTTATTTAAACTAAATCTAATAAAATGCTTATGTATTGTGATTATTGAGTTTCTTCTATATAAGACATTGAATGCAATGATGCTTGAAGAAACCTGAAAGTTCAATACATTGGTGTATCTAGGTCCTTTTGAGGTTATTGAGGTGGATATAGTCTCTAAGCAGAAATTGTTCCTTGTTTTTCAAGAGTCTGAAATTGAATGATTGACCCTCTCCCTTCAGTTGTATTTTCTCCTTCATTTTATATTATTTGTAGGTGAACGTTGTGGAAATTGGAGAAAGTATGGGTTTTTAACTTTCTACTGGGATTGTCTGCTTTCTAGTTTTGTTCTCGTAGTTTGCAATACTTGTAATCAATTGTATGTTTTTAATAATATGCATATGACTGTATCTTATGACATTTCAGTCATAGAAGTGGCAACTGATTTTGAGAAATTTTCTAAACTGTAGCAAATTCATTGGCAAACCAATCATCAGTGAATGCTCCTTCATGGTCAATACAGACTCAACCTGTGTCATTAGGTAGAAATGTATCAGAAAACAAGGCGCCTGCTCATAACCCTGTCAAGGTTGAAGGAACTGCTGATGCAACTGTATCAAGGGCAGGTCCACAAGTAACAGCAGCTCAGAACATTAGGCCATTCATTACTCAAACGGGACCTGGAAATATGTCTACTATGCACCAGCCGTTGCAGGGTGGGAATATGGTTCGGCCTCCTTTGATACCTAGTCACTCTGATATTGCAAAGGTTGTCCAGAAGTTGTTAATACCAAAGCTTCCTGATCATCCCACATGGACTCCTCCGTCAAGAGATTATATGAGTAAGAATTTCACATGTCAGACGTGTGAGCTCACTGTCAGTGAGGTTGATTCTGTTCTTCTCTGTGATGCCTGTGAAAAGGGATTTCACTTGAAGTGCCTGCAGCCATCAGTCATTAGAGGAATTCATAATAGAGTTGATTGGCACTGCATGAAGTGCTTGGGTTTAAGCGGTGGAAAGCCTTTGCCTCCAAAATATGGCCGTGTGATGCGATCCTCAATTACATCACCAAATTTTCCCTCTAATTCAGCTGGTATTCAACCATCTTCAGAGAAGAAACCAGATAACTTAGATCCGAAGGTCAGCCCACAGATGTTAACAACAAATGGAAACTCTGTTCCAACTGGTTCCAGTACCAATCACAATACTGAGCCATCATTTGACTCAAATACCCCAGATACGAGAGATATACAAGGTTCCAACATTTCATCTAGCATTGAAACCATTGACGAGAAGCCTGATCCAAACATATGTGTGAAATCTGCAGCTTGTAGTGCTTCCACTGGCGTGCAGAGTGAAGGTTATGCTGAACAAATAGATTCTAAGGCTTTCACCTGTAAAGATACTTCTGAATCTGAAACTCTTCCTAACATATCTGAGCTGGCTAAAAATGGAAATTTACAATCATCACCAGGTTCTCAAGTTGAGAATGCAGTGTCACAGGACAATGCTGAAATATCATCTGATAGACACGATAGCAGTAGCTTTATTATTAGTAATCAAAAGGAATCTCATGAAGGAGAAAGTACAACTTATGATATCAAGCGTGATGACCTAGATGCTGCACAACCAAATTCTGTTAGAGGTTCTGGAACTAATACTGAAGGTATTCAGCACTGTGCTTTATCTTCAGATAGCTCACATGCTGTAGAATGGATTGGTGATGTTGTACAACTTGTAGATGAGAAAAAGCATTACCAATCTTGCTGCATTGATGGAGTAACATATAGGCTGCAAGGTCATGCATTTTTCACGTCCAGCCATGGCAAACTAACACCTTCTAAACTTCAGGCAAGCAAATTATCATGCATTCTTTCGTAATCTAGCAGTTGGTTATATCATACACCCTGCGGTCACTAATATAAGCAAAAATCCACTTTCTAGGTTCATTCAATAAATGATGTATGTAGCCTATAATAAAGACTACATACATCATTAATTGAATGAACCTAGTAATTGGATTTTTGCTTATATTAGTGACCGGAGGGTGTACTTGTATAAATTTACCTATGAAATTGCAAAGGGCATATGAATAAAAACAACTTGCGTTTCCTGTTTAGGCGAACCTTACAATTACTATTGTGGTTTTTTTTTAATTAATGATTAATGATTGGTTTGTACCCTTGTGCAAAATCATGTCATTATAAAATTTAGAGAACTTTAACCAAGAGACTTGTTCCTATTTAATTTTCAGTCCATGTGGGAAGATTCCAAAACTGGGGTGAAGTGGGTTAAGGTGACAAAGTGCTACTTTCCTGATGATTTGCCGGGGAATATTGGTCATCCTTGTATATCTGAAGTCAACGAGGTAACTTTATTTATTTTTATTTGTAAATCTTCATTTAAAACTGGCGCGTCTTTTTCTTCTTAAATGGATACCAATTCATTATCGCAACTCACAAGTGTGAAAATTTGTCATTGGTATCTTATCAATCAGTGTTTCCCTAAAATTACATTGACTTTGGTCATACAAACACGTGTACTCTAAACAACTGTTGATTGGTTGGAGTTGGAACTCTTGAGATATGATGAGATTTTCTTTCCCATATGTCATCTATGTAAATAGTCTCAATTTCCTTGTATATAATTCTGATGCCATCAGGAGAGATTATAGAATGAGTTGAATCCCTATAATCAAGGGATTATAACTGTACAACAACTATTTCTCCATAAATTCTTATGACTGAGAGTTATTCTCTCAAAGTAATTCAATAACAAATTCCAGTTGGGTTCAAAGCTCACATCGGTTGGCCCTGATAAAACCCTAGTGTCCCAAACCAGAAACGACCAAGGTCGGGACGTCAGCACTAGTCCCAAATCATACGATGATATATTCATTTCCTTATTTCATCTAGGCAAGTAATTCGTGGAGTATAGTTCTGACTTCTGACGTAATTAGAAGATATTATAGTAAGATTTAATCCCTATAATCAAGGGATTAAAATTGTACAACTTTATATCTATAAATTCATATGGCTGAAGGTTATCTCAAAAGCAAATTCAGCAACAATTAGAGTGTATCATCTACAGTAGTTTGATTGGTGTTCCAATCAAATGATAATGCTACACCTCTTACTTATCGTTTAGAACCATATGTTGCTTGATGTTTTCTTATATACGTCTTCTTTTTTCTTTGTTGAAGGTTTATGAATCTAATAGTGATAGAGTTGAAATGGCTAGTTCTATCCGAGGCCCTTGTGTAGTCCTTCCATATGATAAATTTAAACAAGAAAATGACAGAAGATGTCAATTTGGAGTTGAGGCAAGTGCTAGTGTACAACCCATTTTCCTTTGCAGGTTTGTTTCTTTATCCATTGTTTTCTGA
Protein sequence

>MS.gene81427.t1

MEDVPVSEPTLDPPLEIENGEGEQQEERLSKKAKVEEKENSEAELKRVAEIVLVLSTMATMRSGKKPTAVEVELMREARTKLAVLCQGIAPKDIVGGEAIGSVIDDLGLNAKGVDQRLGFRVPKMSIAEKYLFAKSKMEESKKFAAPSTTYTSQPFQTNTGGMVDNRVPTTAVRMFTSDKSNHTSMPSTVSMASMPPHLAAGSSAPSQYQSTSNEVRPPIVSGVMPSSHMGRNPSSVALPRVENPQFKVTAGLSGAPYVLQVQANSLANQSSVNAPSWSIQTQPVSLGRNVSENKAPAHNPVKVEGTADATVSRAGPQVTAAQNIRPFITQTGPGNMSTMHQPLQGGNMVRPPLIPSHSDIAKVVQKLLIPKLPDHPTWTPPSRDYMSKNFTCQTCELTVSEVDSVLLCDACEKGFHLKCLQPSVIRGIHNRVDWHCMKCLGLSGGKPLPPKYGRVMRSSITSPNFPSNSAGIQPSSEKKPDNLDPKVSPQMLTTNGNSVPTGSSTNHNTEPSFDSNTPDTRDIQGSNISSSIETIDEKPDPNICVKSAACSASTGVQSEGYAEQIDSKAFTCKDTSESETLPNISELAKNGNLQSSPGSQVENAVSQDNAEISSDRHDSSSFIISNQKESHEGESTTYDIKRDDLDAAQPNSVRGSGTNTEGIQHCALSSDSSHAVEWIGDVVQLVDEKKHYQSCCIDGVTYRLQGHAFFTSSHGKLTPSKLQSMWEDSKTGVKWVKVTKCYFPDDLPGNIGHPCISEVNEVYESNSDRVEMASSIRGPCVVLPYDKFKQENDRRCQFGVEASASVQPIFLCRFVSLSIVF