AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81566

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81566.t1 MTR_5g086540 88.710 186 17 2 30 215 401 582 2.03e-108 323
MS.gene81566.t1 MTR_5g086090 78.836 189 35 2 30 216 433 618 9.09e-95 289
MS.gene81566.t1 MTR_5g086120 78.075 187 38 1 30 216 434 617 8.88e-93 284
MS.gene81566.t1 MTR_5g086080 77.528 178 35 2 30 205 273 447 2.67e-88 267
MS.gene81566.t1 MTR_5g086040 53.216 171 60 4 30 198 160 312 1.02e-49 165
MS.gene81566.t1 MTR_5g086040 52.632 171 61 3 30 198 267 419 7.32e-49 165
MS.gene81566.t1 MTR_5g086030 54.438 169 61 3 30 198 467 619 5.73e-48 166
MS.gene81566.t1 MTR_5g086040 52.632 171 61 3 30 198 419 571 1.40e-47 164
MS.gene81566.t1 MTR_3g080050 51.765 170 65 4 30 198 449 602 5.65e-46 160
MS.gene81566.t1 MTR_5g086130 55.484 155 53 4 47 198 458 599 1.49e-44 157
MS.gene81566.t1 MTR_5g086130 55.484 155 53 4 47 198 460 601 1.60e-44 157
MS.gene81566.t1 MTR_5g086330 53.642 151 55 4 49 198 93 229 2.77e-42 143
MS.gene81566.t1 MTR_2g024290 50.000 170 67 5 30 198 445 597 3.35e-42 150
MS.gene81566.t1 MTR_5g033490 38.583 127 64 3 62 187 470 583 1.79e-19 86.7
MS.gene81566.t1 MTR_3g088640 34.444 180 87 7 8 185 525 675 2.57e-18 83.2
MS.gene81566.t1 MTR_8g014500 33.962 159 95 4 30 187 488 637 1.04e-17 81.3
MS.gene81566.t1 MTR_7g009320 36.129 155 77 5 47 197 275 411 5.25e-17 79.3
MS.gene81566.t1 MTR_2g024260 47.126 87 33 2 78 164 1 74 7.99e-17 73.6
MS.gene81566.t1 MTR_4g115120 34.437 151 77 3 47 193 262 394 8.92e-17 78.6
MS.gene81566.t1 MTR_5g038450 33.775 151 81 2 53 202 297 429 9.26e-17 78.6
MS.gene81566.t1 MTR_7g037650 51.515 66 31 1 124 189 407 471 3.15e-16 77.0
MS.gene81566.t1 MTR_2g064940 32.919 161 87 4 53 212 196 336 4.45e-16 76.3
MS.gene81566.t1 MTR_2g094910 36.296 135 67 3 62 195 245 361 4.77e-16 76.3
MS.gene81566.t1 MTR_8g042370 35.714 140 64 4 51 189 260 374 5.87e-16 75.9
MS.gene81566.t1 MTR_3g084510 39.850 133 60 5 62 192 750 864 6.85e-16 76.3
MS.gene81566.t1 MTR_3g080170 36.691 139 70 5 59 195 512 634 7.87e-16 75.9
MS.gene81566.t1 MTR_3g117850 34.783 138 71 5 62 198 311 430 8.34e-16 75.9
MS.gene81566.t1 MTR_1g033000 36.090 133 65 4 62 192 743 857 8.53e-16 75.9
MS.gene81566.t1 MTR_3g117850 34.783 138 71 5 62 198 341 460 1.08e-15 75.5
MS.gene81566.t1 MTR_3g117850 34.783 138 71 5 62 198 440 559 1.27e-15 75.5
MS.gene81566.t1 MTR_1g029690 36.000 125 60 2 62 185 517 622 1.49e-15 75.1
MS.gene81566.t1 MTR_5g019050 35.000 140 73 5 59 196 510 633 1.61e-15 75.1
MS.gene81566.t1 MTR_5g085790 35.971 139 73 5 59 195 513 637 1.64e-15 75.1
MS.gene81566.t1 MTR_4g063950 40.310 129 58 4 62 189 259 369 1.79e-15 74.7
MS.gene81566.t1 MTR_3g096555 35.659 129 63 3 62 189 507 616 1.84e-15 75.1
MS.gene81566.t1 MTR_5g086040 56.000 75 28 2 30 102 457 528 2.27e-15 74.7
MS.gene81566.t1 MTR_3g096555 35.659 129 63 3 62 189 465 574 2.32e-15 74.7
MS.gene81566.t1 MTR_7g018890 31.847 157 89 5 54 207 547 688 2.38e-15 74.7
MS.gene81566.t1 MTR_4g058710 34.028 144 76 3 51 193 386 511 2.64e-15 74.3
MS.gene81566.t1 MTR_7g074610 32.026 153 82 3 47 195 240 374 3.18e-15 73.9
MS.gene81566.t1 MTR_3g088855 33.333 132 63 4 62 189 470 580 3.51e-15 73.9
MS.gene81566.t1 MTR_1g033040 35.606 132 65 4 63 192 747 860 4.54e-15 73.9
MS.gene81566.t1 MTR_4g052290 34.395 157 77 7 40 189 663 800 5.03e-15 73.6
MS.gene81566.t1 MTR_8g083240 36.842 133 64 4 62 192 734 848 5.62e-15 73.6
MS.gene81566.t1 MTR_2g024290 50.602 83 36 3 30 111 445 523 6.51e-15 73.2
MS.gene81566.t1 MTR_8g469230 33.333 141 75 2 53 192 293 415 8.70e-15 72.8
MS.gene81566.t1 MTR_2g039290 32.317 164 89 5 47 206 983 1128 1.15e-14 72.8
MS.gene81566.t1 MTR_2g039290 32.317 164 89 5 47 206 1205 1350 1.18e-14 72.8
MS.gene81566.t1 MTR_2g039290 32.317 164 89 5 47 206 1217 1362 1.18e-14 72.8
MS.gene81566.t1 MTR_4g092070 35.338 133 62 4 61 192 275 384 1.62e-14 72.0
MS.gene81566.t1 MTR_1g094730 36.923 130 68 3 64 192 301 417 1.62e-14 72.0
MS.gene81566.t1 MTR_2g100290 34.266 143 72 6 48 189 556 677 2.30e-14 71.6
MS.gene81566.t1 MTR_2g095180 32.927 164 98 5 32 192 260 414 2.86e-14 71.2
MS.gene81566.t1 MTR_4g073140 34.109 129 65 4 62 189 465 574 3.43e-14 71.2
MS.gene81566.t1 MTR_3g011730 33.117 154 79 4 58 208 464 596 3.95e-14 70.9
MS.gene81566.t1 MTR_4g123480 30.357 168 88 5 30 193 47 189 4.31e-14 68.6
MS.gene81566.t1 MTR_8g020920 34.722 144 72 3 54 193 238 363 4.48e-14 70.9
MS.gene81566.t1 MTR_0074s0060 33.083 133 70 5 58 189 468 582 5.04e-14 70.9
MS.gene81566.t1 MTR_8g016120 31.325 166 83 5 48 203 554 698 5.57e-14 70.5
MS.gene81566.t1 MTR_2g064930 31.677 161 89 4 53 212 201 341 6.51e-14 70.1
MS.gene81566.t1 MTR_3g031470 32.836 134 80 3 58 190 680 804 6.52e-14 70.5
MS.gene81566.t1 MTR_5g099130 34.667 150 79 4 49 197 259 390 7.27e-14 70.1
MS.gene81566.t1 MTR_5g099130 34.667 150 79 4 49 197 248 379 7.33e-14 69.7
MS.gene81566.t1 MTR_5g099130 34.667 150 79 4 49 197 255 386 8.07e-14 69.7
MS.gene81566.t1 MTR_8g008820 34.694 147 75 4 53 197 238 365 8.20e-14 69.7
MS.gene81566.t1 MTR_7g079320 32.857 140 74 3 54 192 508 628 8.23e-14 70.1
MS.gene81566.t1 MTR_8g058250 36.029 136 67 4 55 189 819 935 8.43e-14 70.1
MS.gene81566.t1 MTR_5g031870 30.345 145 78 3 62 205 294 416 8.67e-14 69.7
MS.gene81566.t1 MTR_8g058250 36.029 136 67 4 55 189 723 839 8.86e-14 70.1
MS.gene81566.t1 MTR_5g031870 30.345 145 78 3 62 205 299 421 8.98e-14 69.7
MS.gene81566.t1 MTR_2g075250 35.211 142 68 4 51 189 817 937 9.37e-14 70.1
MS.gene81566.t1 MTR_7g015230 33.117 154 77 7 40 186 670 804 1.07e-13 69.7
MS.gene81566.t1 MTR_2g075250 35.211 142 68 4 51 189 722 842 1.09e-13 69.7
MS.gene81566.t1 MTR_3g031610 34.899 149 69 5 54 191 660 791 1.09e-13 69.7
MS.gene81566.t1 MTR_7g083500 34.328 134 68 3 62 194 244 358 1.17e-13 69.3
MS.gene81566.t1 MTR_5g026370 32.237 152 84 4 59 209 255 388 1.36e-13 69.3
MS.gene81566.t1 MTR_8g087740 33.117 154 80 4 51 200 820 954 1.39e-13 69.7
MS.gene81566.t1 MTR_6g088510 33.758 157 80 5 54 203 250 389 1.55e-13 68.9
MS.gene81566.t1 MTR_3g031600 35.036 137 63 4 64 191 675 794 1.74e-13 69.3
MS.gene81566.t1 MTR_8g088410 32.836 134 71 3 62 194 240 355 2.21e-13 68.6
MS.gene81566.t1 MTR_8g101670 33.333 129 66 5 62 189 565 674 2.56e-13 68.6
MS.gene81566.t1 MTR_5g013610 30.882 136 75 4 52 186 224 341 2.73e-13 68.2
MS.gene81566.t1 MTR_2g031520 33.813 139 72 3 52 189 533 652 2.77e-13 68.6
MS.gene81566.t1 MTR_1g105640 33.835 133 68 5 58 189 494 607 2.77e-13 68.6
MS.gene81566.t1 MTR_5g088400 33.766 154 79 7 47 195 222 357 2.79e-13 68.2
MS.gene81566.t1 MTR_4g129010 30.303 132 72 4 59 189 201 313 2.95e-13 68.2
MS.gene81566.t1 MTR_2g073540 34.074 135 69 4 56 189 582 697 3.32e-13 68.2
MS.gene81566.t1 MTR_1g105640 33.835 133 68 5 58 189 494 607 3.38e-13 68.2
MS.gene81566.t1 MTR_1g105640 33.835 133 68 5 58 189 494 607 3.68e-13 68.2
MS.gene81566.t1 MTR_2g073520 34.074 135 69 4 56 189 688 803 3.74e-13 68.2
MS.gene81566.t1 MTR_3g102400 30.769 130 82 3 62 190 679 801 3.86e-13 68.2
MS.gene81566.t1 MTR_2g100450 33.588 131 61 4 62 189 530 637 4.23e-13 68.2
MS.gene81566.t1 MTR_8g101670 33.600 125 63 5 62 185 565 670 4.28e-13 68.2
MS.gene81566.t1 MTR_2g082430 29.927 137 72 3 57 192 264 377 4.35e-13 67.8
MS.gene81566.t1 MTR_4g126270 31.481 162 89 6 55 214 696 837 4.70e-13 67.8
MS.gene81566.t1 MTR_2g100450 33.588 131 61 4 62 189 735 842 4.70e-13 67.8
MS.gene81566.t1 MTR_2g105680 30.667 150 80 4 49 193 942 1072 4.86e-13 67.8
MS.gene81566.t1 MTR_7g015240 33.117 154 77 7 40 186 657 791 5.12e-13 67.8
MS.gene81566.t1 MTR_0007s0020 31.579 133 72 5 58 189 732 846 5.19e-13 67.8
MS.gene81566.t1 MTR_7g015250 32.468 154 78 7 40 186 654 788 5.40e-13 67.8
MS.gene81566.t1 MTR_6g088610 29.648 199 113 9 26 216 416 595 5.82e-13 67.8
MS.gene81566.t1 MTR_7g113980 28.261 184 93 6 21 189 234 393 5.83e-13 67.4
MS.gene81566.t1 MTR_8g100155 31.469 143 79 2 53 194 229 353 7.11e-13 67.0
MS.gene81566.t1 MTR_7g099220 31.977 172 95 6 47 214 478 631 7.18e-13 67.4
MS.gene81566.t1 MTR_7g015290 32.258 155 78 7 40 186 176 311 7.18e-13 66.6
MS.gene81566.t1 MTR_3g031480 32.308 130 78 3 62 190 679 799 7.40e-13 67.4
MS.gene81566.t1 MTR_1g021845 33.333 135 73 3 61 194 497 615 8.21e-13 67.0
MS.gene81566.t1 MTR_8g101670 34.167 120 59 5 62 180 553 653 8.73e-13 67.0
MS.gene81566.t1 MTR_0194s0030 33.333 159 87 8 49 205 479 620 8.77e-13 67.0
MS.gene81566.t1 MTR_5g087350 33.582 134 67 4 59 186 859 976 9.52e-13 67.0
MS.gene81566.t1 MTR_3g116450 31.928 166 92 6 55 214 441 591 1.00e-12 67.0
MS.gene81566.t1 MTR_7g015310 33.117 154 77 7 40 186 660 794 1.16e-12 66.6
MS.gene81566.t1 MTR_5g091950 32.298 161 89 3 56 215 834 975 1.21e-12 66.6
MS.gene81566.t1 MTR_8g016330 32.215 149 80 5 59 204 624 754 1.26e-12 66.6
MS.gene81566.t1 MTR_2g073630 33.333 135 70 4 56 189 784 899 1.28e-12 66.6
MS.gene81566.t1 MTR_3g031490 31.655 139 85 2 49 186 655 784 1.30e-12 66.6
MS.gene81566.t1 MTR_5g091950 32.298 161 89 3 56 215 699 840 1.41e-12 66.6
MS.gene81566.t1 MTR_5g091950 32.298 161 89 3 56 215 744 885 1.45e-12 66.6
MS.gene81566.t1 MTR_7g015280 30.726 179 94 9 40 208 650 808 1.47e-12 66.6
MS.gene81566.t1 MTR_1g090520 36.154 130 66 6 64 190 973 1088 1.62e-12 66.2
MS.gene81566.t1 MTR_6g053000 32.331 133 71 5 58 189 497 611 1.80e-12 66.2
MS.gene81566.t1 MTR_3g031640 31.783 129 79 2 64 191 675 795 2.28e-12 65.9
MS.gene81566.t1 MTR_1g047670 31.013 158 77 6 62 214 974 1104 2.50e-12 65.9
MS.gene81566.t1 MTR_6g463710 30.827 133 73 5 58 189 732 846 2.61e-12 65.9
MS.gene81566.t1 MTR_6g057770 30.827 133 73 5 58 189 732 846 2.66e-12 65.9
MS.gene81566.t1 MTR_2g012670 28.070 171 97 5 26 190 560 710 2.76e-12 65.5
MS.gene81566.t1 MTR_5g005480 31.343 134 72 4 57 189 488 602 3.02e-12 65.5
MS.gene81566.t1 MTR_8g015010 31.250 144 78 4 63 205 777 900 3.28e-12 65.5
MS.gene81566.t1 MTR_6g016040 28.800 125 62 3 62 185 273 371 3.47e-12 65.1
MS.gene81566.t1 MTR_2g041960 34.000 150 77 5 47 192 228 359 3.55e-12 65.1
MS.gene81566.t1 MTR_5g042440 33.333 138 64 5 59 189 493 609 4.01e-12 65.1
MS.gene81566.t1 MTR_6g082700 36.301 146 64 5 55 194 272 394 4.29e-12 64.7
MS.gene81566.t1 MTR_2g024330 31.646 158 83 5 42 192 559 698 4.83e-12 65.1
MS.gene81566.t1 MTR_7g015320 32.468 154 78 7 40 186 659 793 4.84e-12 65.1
MS.gene81566.t1 MTR_7g058530 33.824 136 77 3 62 196 671 794 5.57e-12 64.7
MS.gene81566.t1 MTR_5g014700 28.230 209 111 7 11 209 813 992 5.61e-12 64.7
MS.gene81566.t1 MTR_8g057660 31.818 132 66 3 59 189 205 313 6.34e-12 63.9
MS.gene81566.t1 MTR_8g015100 29.032 155 81 6 44 189 615 749 6.64e-12 64.7
MS.gene81566.t1 MTR_8g059615 30.769 130 70 4 61 189 804 914 6.67e-12 64.7
MS.gene81566.t1 MTR_3g110840 30.464 151 82 6 62 209 824 954 7.17e-12 64.3
MS.gene81566.t1 MTR_8g015100 29.032 155 81 6 44 189 398 532 7.58e-12 64.3
MS.gene81566.t1 MTR_7g451040 34.328 134 67 4 57 189 704 817 8.01e-12 64.3
MS.gene81566.t1 MTR_1g082310 26.630 184 96 6 21 189 260 419 1.04e-11 63.9
MS.gene81566.t1 MTR_7g058860 29.323 133 79 3 62 192 673 792 1.12e-11 63.9
MS.gene81566.t1 MTR_1g089570 26.374 182 95 5 23 189 226 383 1.17e-11 63.5
MS.gene81566.t1 MTR_6g011330 35.915 142 64 5 56 192 297 416 1.26e-11 63.5
MS.gene81566.t1 MTR_8g064690 30.994 171 95 7 49 214 459 611 1.34e-11 63.5
MS.gene81566.t1 MTR_7g101800 27.551 196 107 6 23 204 225 399 1.36e-11 63.5
MS.gene81566.t1 MTR_7g101800 27.551 196 107 6 23 204 213 387 1.45e-11 63.2
MS.gene81566.t1 MTR_7g101800 27.551 196 107 6 23 204 205 379 1.52e-11 63.2
MS.gene81566.t1 MTR_2g010470 33.793 145 74 6 47 189 838 962 1.53e-11 63.5
MS.gene81566.t1 MTR_8g467150 29.545 132 73 3 59 189 607 719 1.63e-11 63.5
MS.gene81566.t1 MTR_5g005450 29.323 133 74 2 58 189 483 596 1.66e-11 63.2
MS.gene81566.t1 MTR_7g062990 31.111 135 71 4 58 189 504 619 1.71e-11 63.2
MS.gene81566.t1 MTR_8g059605 30.303 132 72 4 56 186 816 928 1.77e-11 63.2
MS.gene81566.t1 MTR_5g087340 33.108 148 75 6 50 189 919 1050 1.80e-11 63.2
MS.gene81566.t1 MTR_4g125260 31.884 138 75 2 56 192 246 365 1.85e-11 63.2
MS.gene81566.t1 MTR_7g058550 33.333 126 71 3 62 186 670 783 1.95e-11 63.2
MS.gene81566.t1 MTR_8g059605 30.303 132 72 4 56 186 621 733 2.05e-11 63.2
MS.gene81566.t1 MTR_7g098610 30.370 135 63 4 62 189 876 986 2.37e-11 63.2
MS.gene81566.t1 MTR_1g105650 31.507 146 68 5 58 196 512 632 2.57e-11 62.8
MS.gene81566.t1 MTR_7g062660 29.630 135 71 5 58 189 491 604 2.66e-11 62.8
MS.gene81566.t1 MTR_7g029650 27.933 179 104 5 25 192 476 640 2.68e-11 62.8
MS.gene81566.t1 MTR_2g074990 30.714 140 77 4 51 189 803 923 2.84e-11 62.8
MS.gene81566.t1 MTR_8g015150 30.952 126 66 3 63 187 477 582 2.91e-11 62.4
MS.gene81566.t1 MTR_1g069340 30.909 165 90 6 47 205 497 643 3.18e-11 62.4
MS.gene81566.t1 MTR_8g015150 30.952 126 66 3 63 187 722 827 3.69e-11 62.4
MS.gene81566.t1 MTR_8g023560 30.645 186 101 7 26 205 505 668 4.36e-11 62.0
MS.gene81566.t1 MTR_2g020810 32.639 144 70 6 48 189 269 387 4.49e-11 62.0
MS.gene81566.t1 MTR_1g086870 34.109 129 66 3 62 189 451 561 4.60e-11 62.0
MS.gene81566.t1 MTR_8g023560 30.645 186 101 7 26 205 536 699 4.62e-11 62.0
MS.gene81566.t1 MTR_4g036575 33.088 136 72 6 56 189 877 995 5.05e-11 62.0
MS.gene81566.t1 MTR_8g445800 28.244 131 73 4 61 190 860 970 5.15e-11 62.0
MS.gene81566.t1 MTR_8g014690 26.772 127 73 3 63 189 731 837 5.54e-11 62.0
MS.gene81566.t1 MTR_8g445800 28.244 131 73 4 61 190 662 772 6.46e-11 61.6
MS.gene81566.t1 MTR_8g445800 28.244 131 73 4 61 190 715 825 6.79e-11 61.6
MS.gene81566.t1 MTR_8g014760 28.125 128 71 3 63 189 724 831 7.00e-11 61.6
MS.gene81566.t1 MTR_8g014700 29.839 124 66 4 63 185 733 836 7.02e-11 61.6
MS.gene81566.t1 MTR_5g038870 33.775 151 70 5 47 189 228 356 7.39e-11 61.2
MS.gene81566.t1 MTR_8g014700 29.839 124 66 4 63 185 757 860 7.53e-11 61.6
MS.gene81566.t1 MTR_7g100630 30.952 126 68 3 62 186 766 873 7.65e-11 61.6
MS.gene81566.t1 MTR_3g064090 29.771 131 73 3 62 191 489 601 7.77e-11 61.2
MS.gene81566.t1 MTR_3g079850 29.851 134 72 3 58 189 499 612 7.79e-11 61.2
MS.gene81566.t1 MTR_8g014500 39.000 100 58 2 30 128 488 585 8.30e-11 61.2
MS.gene81566.t1 MTR_2g103950 30.147 136 75 4 55 189 195 311 8.52e-11 60.8
MS.gene81566.t1 MTR_2g073650 31.206 141 75 4 51 189 813 933 9.44e-11 61.2
MS.gene81566.t1 MTR_2g074980 32.624 141 73 4 51 189 781 901 9.66e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81566.t1 AT3G21630 44.970 169 75 4 30 198 449 599 3.15e-37 137
MS.gene81566.t1 AT1G51940 37.984 129 72 3 62 189 502 623 3.26e-18 82.8
MS.gene81566.t1 AT3G45860 34.899 149 75 4 58 203 509 638 1.56e-16 78.2
MS.gene81566.t1 AT5G38560 33.333 168 90 6 47 207 482 634 2.59e-16 77.4
MS.gene81566.t1 AT1G16130 37.762 143 68 5 59 199 574 697 4.43e-16 76.6
MS.gene81566.t1 AT2G19210 33.758 157 84 6 53 208 728 865 5.93e-16 76.6
MS.gene81566.t1 AT1G21590 37.984 129 60 3 62 189 571 680 7.93e-16 76.3
MS.gene81566.t1 AT1G21590 37.984 129 60 3 62 189 531 640 8.20e-16 75.9
MS.gene81566.t1 AT4G23280 34.783 138 65 4 58 191 452 568 9.89e-16 75.9
MS.gene81566.t1 AT4G23280 34.783 138 65 4 58 191 502 618 9.92e-16 75.9
MS.gene81566.t1 AT4G23280 34.783 138 65 4 58 191 500 616 1.09e-15 75.5
MS.gene81566.t1 AT1G16150 32.500 160 85 3 40 195 560 700 1.47e-15 75.1
MS.gene81566.t1 AT2G28250 36.000 150 77 4 53 201 371 502 2.08e-15 74.7
MS.gene81566.t1 AT2G28250 36.000 150 77 4 53 201 371 502 2.08e-15 74.7
MS.gene81566.t1 AT2G28250 36.000 150 77 4 53 201 371 502 2.08e-15 74.7
MS.gene81566.t1 AT2G28250 36.000 150 77 4 53 201 371 502 2.08e-15 74.7
MS.gene81566.t1 AT2G28250 36.000 150 77 4 53 201 371 502 2.08e-15 74.7
MS.gene81566.t1 AT2G28250 36.000 150 77 4 53 201 371 502 2.08e-15 74.7
MS.gene81566.t1 AT1G07550 33.152 184 97 6 30 212 692 850 4.10e-15 73.9
MS.gene81566.t1 AT4G11530 32.639 144 78 4 54 196 506 631 4.73e-15 73.9
MS.gene81566.t1 AT4G29990 37.984 129 59 5 62 189 734 842 4.88e-15 73.9
MS.gene81566.t1 AT4G23270 34.328 134 69 3 59 191 485 600 5.29e-15 73.6
MS.gene81566.t1 AT5G01020 30.968 155 85 3 47 197 218 354 6.00e-15 73.2
MS.gene81566.t1 AT4G23270 34.328 134 69 3 59 191 485 600 6.83e-15 73.2
MS.gene81566.t1 AT4G23270 34.328 134 69 3 59 191 485 600 6.83e-15 73.2
MS.gene81566.t1 AT1G14370 36.250 160 78 6 47 201 238 378 6.86e-15 73.2
MS.gene81566.t1 AT2G28940 39.231 130 59 4 62 189 157 268 6.88e-15 72.8
MS.gene81566.t1 AT2G28940 39.231 130 59 4 62 189 276 387 6.89e-15 73.2
MS.gene81566.t1 AT4G34440 33.333 159 81 7 55 205 461 602 1.02e-14 72.8
MS.gene81566.t1 AT4G34440 33.333 159 81 7 55 205 461 602 1.02e-14 72.8
MS.gene81566.t1 AT1G09970 35.252 139 69 5 49 186 830 948 1.02e-14 72.8
MS.gene81566.t1 AT5G56460 33.094 139 74 3 62 199 246 366 1.08e-14 72.4
MS.gene81566.t1 AT5G63940 37.405 131 60 4 62 190 524 634 1.57e-14 72.4
MS.gene81566.t1 AT1G26970 35.333 150 78 5 52 200 127 258 1.68e-14 71.2
MS.gene81566.t1 AT3G23750 35.821 134 64 5 62 192 743 857 1.77e-14 72.0
MS.gene81566.t1 AT5G47070 33.854 192 91 8 6 192 208 368 2.09e-14 71.6
MS.gene81566.t1 AT3G28690 36.054 147 75 5 59 204 293 421 2.37e-14 71.6
MS.gene81566.t1 AT3G28690 36.806 144 72 5 62 204 196 321 2.57e-14 71.2
MS.gene81566.t1 AT1G51860 37.162 148 62 8 62 204 745 866 2.67e-14 71.6
MS.gene81566.t1 AT2G33580 34.615 156 78 6 59 204 520 661 2.75e-14 71.6
MS.gene81566.t1 AT5G15080 34.058 138 72 3 56 192 306 425 2.84e-14 71.2
MS.gene81566.t1 AT3G28690 36.054 147 75 5 59 204 242 370 2.93e-14 71.2
MS.gene81566.t1 AT1G51860 37.162 148 62 8 62 204 601 722 3.08e-14 71.2
MS.gene81566.t1 AT2G16750 34.884 129 64 4 62 189 436 545 3.16e-14 71.2
MS.gene81566.t1 AT2G16750 34.884 129 64 4 62 189 436 545 3.16e-14 71.2
MS.gene81566.t1 AT1G79670 34.899 149 75 5 52 198 535 663 3.39e-14 71.2
MS.gene81566.t1 AT1G26970 35.333 150 78 5 52 200 242 373 3.45e-14 70.9
MS.gene81566.t1 AT1G79670 34.899 149 75 5 52 198 572 700 3.46e-14 71.2
MS.gene81566.t1 AT1G53420 33.571 140 73 5 51 189 775 895 3.66e-14 71.2
MS.gene81566.t1 AT4G35030 34.109 129 65 2 62 189 127 236 5.54e-14 69.7
MS.gene81566.t1 AT4G23310 33.333 135 71 3 58 191 626 742 6.92e-14 70.5
MS.gene81566.t1 AT2G39110 25.604 207 122 5 23 215 195 383 7.75e-14 70.1
MS.gene81566.t1 AT4G23310 33.333 135 71 3 58 191 666 782 7.98e-14 70.1
MS.gene81566.t1 AT2G39110 25.604 207 122 5 23 215 210 398 8.34e-14 70.1
MS.gene81566.t1 AT1G51850 36.301 146 67 6 62 205 740 861 9.06e-14 70.1
MS.gene81566.t1 AT2G07180 32.432 148 78 4 53 199 248 374 9.82e-14 69.7
MS.gene81566.t1 AT2G07180 32.432 148 78 4 53 199 248 374 9.82e-14 69.7
MS.gene81566.t1 AT2G02800 37.908 153 73 6 47 195 235 369 9.85e-14 69.7
MS.gene81566.t1 AT2G02800 37.908 153 73 6 47 195 235 369 9.85e-14 69.7
MS.gene81566.t1 AT1G51850 36.301 146 67 6 62 205 720 841 1.01e-13 70.1
MS.gene81566.t1 AT2G17220 33.813 139 73 2 49 186 243 363 1.10e-13 69.3
MS.gene81566.t1 AT2G17220 33.813 139 73 2 49 186 244 364 1.11e-13 69.3
MS.gene81566.t1 AT1G79680 30.667 150 84 2 50 198 583 713 1.24e-13 69.7
MS.gene81566.t1 AT1G51805 35.616 146 68 7 62 205 739 860 1.32e-13 69.7
MS.gene81566.t1 AT4G23290 31.361 169 92 6 30 196 496 642 1.34e-13 69.7
MS.gene81566.t1 AT1G51805 35.616 146 68 7 62 205 715 836 1.34e-13 69.7
MS.gene81566.t1 AT4G23200 31.250 144 78 4 54 196 490 613 1.39e-13 69.3
MS.gene81566.t1 AT4G35030 34.109 129 65 2 62 189 268 377 1.39e-13 69.3
MS.gene81566.t1 AT4G35030 34.109 129 65 2 62 189 268 377 1.39e-13 69.3
MS.gene81566.t1 AT4G35030 34.109 129 65 2 62 189 268 377 1.39e-13 69.3
MS.gene81566.t1 AT4G35030 34.109 129 65 2 62 189 268 377 1.39e-13 69.3
MS.gene81566.t1 AT4G23290 31.361 169 92 6 30 196 453 599 1.41e-13 69.3
MS.gene81566.t1 AT1G72540 34.286 140 71 5 50 186 237 358 1.42e-13 69.3
MS.gene81566.t1 AT1G09970 34.752 141 68 6 49 186 830 949 1.55e-13 69.3
MS.gene81566.t1 AT1G55200 33.566 143 73 3 48 189 528 649 1.94e-13 68.9
MS.gene81566.t1 AT1G55200 33.566 143 73 3 48 189 528 649 1.94e-13 68.9
MS.gene81566.t1 AT1G55200 33.566 143 73 3 48 189 528 649 1.94e-13 68.9
MS.gene81566.t1 AT1G55200 33.566 143 73 3 48 189 528 649 1.94e-13 68.9
MS.gene81566.t1 AT4G35030 35.200 125 61 2 62 185 268 373 2.05e-13 68.6
MS.gene81566.t1 AT5G11410 31.092 119 63 3 68 185 134 234 2.13e-13 67.4
MS.gene81566.t1 AT3G13690 31.481 162 84 5 48 203 560 700 2.34e-13 68.9
MS.gene81566.t1 AT3G13690 31.481 162 84 5 48 203 560 700 2.34e-13 68.9
MS.gene81566.t1 AT3G13690 31.481 162 84 5 48 203 560 700 2.34e-13 68.9
MS.gene81566.t1 AT4G23190 31.429 140 74 6 58 194 508 628 2.70e-13 68.6
MS.gene81566.t1 AT4G23190 31.429 140 74 6 58 194 430 550 2.70e-13 68.6
MS.gene81566.t1 AT4G23190 31.429 140 74 6 58 194 430 550 2.70e-13 68.6
MS.gene81566.t1 AT2G26290 33.094 139 74 4 56 193 249 369 2.77e-13 68.6
MS.gene81566.t1 AT3G09830 32.500 160 86 4 49 207 242 380 3.10e-13 68.2
MS.gene81566.t1 AT3G09830 32.500 160 86 4 49 207 242 380 3.10e-13 68.2
MS.gene81566.t1 AT3G09830 32.500 160 86 4 49 207 242 380 3.10e-13 68.2
MS.gene81566.t1 AT5G03320 33.094 139 74 3 49 186 239 359 3.69e-13 68.2
MS.gene81566.t1 AT5G03320 33.094 139 74 3 49 186 239 359 3.69e-13 68.2
MS.gene81566.t1 AT1G51890 35.878 131 58 5 62 189 459 566 3.87e-13 68.2
MS.gene81566.t1 AT1G49100 38.462 156 66 8 62 210 743 875 4.16e-13 68.2
MS.gene81566.t1 AT1G51890 35.878 131 58 5 62 189 667 774 4.32e-13 68.2
MS.gene81566.t1 AT1G51890 35.878 131 58 5 62 189 753 860 4.71e-13 68.2
MS.gene81566.t1 AT4G02410 34.568 162 81 7 30 189 488 626 4.77e-13 67.8
MS.gene81566.t1 AT1G51890 35.878 131 58 5 62 189 731 838 5.30e-13 67.8
MS.gene81566.t1 AT1G66150 35.338 133 67 6 62 192 753 868 5.58e-13 67.8
MS.gene81566.t1 AT2G05940 34.815 135 69 4 56 189 248 364 5.77e-13 67.4
MS.gene81566.t1 AT3G01300 32.609 138 74 3 56 192 300 419 5.98e-13 67.4
MS.gene81566.t1 AT3G46420 33.526 173 82 9 30 195 664 810 6.00e-13 67.8
MS.gene81566.t1 AT2G19190 36.434 129 61 5 62 189 734 842 6.72e-13 67.4
MS.gene81566.t1 AT3G05140 31.250 144 74 5 48 190 291 410 7.51e-13 67.0
MS.gene81566.t1 AT3G45920 33.333 129 64 5 62 189 43 150 7.88e-13 65.1
MS.gene81566.t1 AT3G05140 32.090 134 67 4 58 190 348 458 8.54e-13 67.0
MS.gene81566.t1 AT1G51880 34.437 151 72 7 62 209 745 871 8.95e-13 67.0
MS.gene81566.t1 AT5G11410 31.092 119 63 3 68 185 224 324 8.95e-13 66.6
MS.gene81566.t1 AT1G10620 32.500 160 89 7 49 205 518 661 9.48e-13 67.0
MS.gene81566.t1 AT1G53440 33.803 142 70 4 51 189 818 938 9.62e-13 67.0
MS.gene81566.t1 AT5G54590 28.472 144 79 3 47 189 256 376 9.74e-13 66.6
MS.gene81566.t1 AT5G54590 28.472 144 79 3 47 189 256 376 9.74e-13 66.6
MS.gene81566.t1 AT5G54590 28.472 144 79 3 47 189 256 376 9.74e-13 66.6
MS.gene81566.t1 AT1G51880 34.437 151 72 7 62 209 753 879 9.76e-13 67.0
MS.gene81566.t1 AT1G69730 31.333 150 83 3 50 198 597 727 9.79e-13 67.0
MS.gene81566.t1 AT5G18910 31.579 152 77 6 48 197 339 465 1.00e-12 67.0
MS.gene81566.t1 AT2G28960 30.380 158 85 4 30 186 574 707 1.09e-12 67.0
MS.gene81566.t1 AT1G51880 34.437 151 72 7 62 209 727 853 1.11e-12 67.0
MS.gene81566.t1 AT1G53430 35.417 144 68 5 49 189 778 899 1.16e-12 67.0
MS.gene81566.t1 AT1G53430 35.417 144 68 5 49 189 819 940 1.16e-12 67.0
MS.gene81566.t1 AT1G77280 35.878 131 62 3 62 189 566 677 1.20e-12 66.6
MS.gene81566.t1 AT1G77280 35.878 131 62 3 62 189 566 677 1.20e-12 66.6
MS.gene81566.t1 AT1G61590 33.775 151 81 3 59 208 263 395 1.21e-12 66.6
MS.gene81566.t1 AT2G28960 30.380 158 85 4 30 186 706 839 1.29e-12 66.6
MS.gene81566.t1 AT2G28970 31.638 177 94 6 30 205 577 727 1.39e-12 66.6
MS.gene81566.t1 AT3G46330 31.056 161 87 6 30 189 699 836 1.49e-12 66.6
MS.gene81566.t1 AT3G46330 31.056 161 87 6 30 189 675 812 1.64e-12 66.2
MS.gene81566.t1 AT2G28970 31.638 177 94 6 30 205 612 762 1.79e-12 66.2
MS.gene81566.t1 AT2G19130 33.594 128 65 5 64 189 657 766 1.83e-12 66.2
MS.gene81566.t1 AT5G02070 32.298 161 85 7 30 185 498 639 1.88e-12 66.2
MS.gene81566.t1 AT1G52290 32.955 176 94 7 47 216 286 443 2.10e-12 65.9
MS.gene81566.t1 AT4G22130 32.484 157 82 5 42 192 534 672 2.19e-12 65.9
MS.gene81566.t1 AT3G53810 32.099 162 86 6 30 189 480 619 2.40e-12 65.9
MS.gene81566.t1 AT4G22130 32.484 157 82 5 42 192 393 531 2.50e-12 65.9
MS.gene81566.t1 AT1G51790 31.056 161 86 4 30 189 760 896 2.53e-12 65.9
MS.gene81566.t1 AT1G17230 31.783 129 69 3 62 189 962 1072 2.57e-12 65.9
MS.gene81566.t1 AT1G17230 31.783 129 69 3 62 189 962 1072 2.58e-12 65.9
MS.gene81566.t1 AT1G51790 31.056 161 86 4 30 189 708 844 2.62e-12 65.9
MS.gene81566.t1 AT1G51790 31.056 161 86 4 30 189 708 844 2.62e-12 65.9
MS.gene81566.t1 AT4G11900 31.690 142 74 5 57 196 625 745 2.81e-12 65.9
MS.gene81566.t1 AT4G11460 31.206 141 76 4 57 196 506 626 3.07e-12 65.5
MS.gene81566.t1 AT1G51820 35.878 131 58 6 62 189 478 585 3.15e-12 65.5
MS.gene81566.t1 AT2G28990 33.793 145 72 5 62 205 739 860 3.17e-12 65.5
MS.gene81566.t1 AT2G28990 33.793 145 72 5 62 205 739 860 3.17e-12 65.5
MS.gene81566.t1 AT2G28930 34.043 141 74 4 62 201 241 363 3.24e-12 65.1
MS.gene81566.t1 AT4G23130 33.333 141 63 5 58 191 498 614 3.29e-12 65.5
MS.gene81566.t1 AT2G28930 34.043 141 74 4 62 201 252 374 3.29e-12 65.1
MS.gene81566.t1 AT4G11460 31.206 141 76 4 57 196 503 623 3.34e-12 65.5
MS.gene81566.t1 AT1G51820 35.878 131 58 6 62 189 740 847 3.42e-12 65.5
MS.gene81566.t1 AT4G11900 31.690 142 74 5 57 196 694 814 3.42e-12 65.5
MS.gene81566.t1 AT4G23130 33.333 141 63 5 58 191 502 618 3.42e-12 65.5
MS.gene81566.t1 AT4G11460 31.206 141 76 4 57 196 428 548 3.63e-12 65.5
MS.gene81566.t1 AT2G28930 34.043 141 74 4 62 201 244 366 3.90e-12 65.1
MS.gene81566.t1 AT4G23260 31.429 140 75 5 58 196 486 605 4.19e-12 65.1
MS.gene81566.t1 AT3G24550 29.730 185 107 7 26 203 401 569 4.48e-12 65.1
MS.gene81566.t1 AT4G32710 35.443 158 85 4 30 186 521 662 5.02e-12 65.1
MS.gene81566.t1 AT4G23260 31.429 140 75 5 58 196 497 616 5.08e-12 64.7
MS.gene81566.t1 AT1G69790 32.192 146 78 5 52 195 231 357 5.33e-12 64.3
MS.gene81566.t1 AT1G51800 31.056 161 82 5 30 187 718 852 6.03e-12 64.7
MS.gene81566.t1 AT1G69790 32.192 146 78 5 52 195 242 368 6.06e-12 64.3
MS.gene81566.t1 AT1G61860 31.013 158 88 4 62 216 249 388 6.70e-12 64.3
MS.gene81566.t1 AT5G02290 38.889 126 58 5 62 186 240 347 7.16e-12 64.3
MS.gene81566.t1 AT5G02290 38.889 126 58 5 62 186 240 347 7.16e-12 64.3
MS.gene81566.t1 AT1G33260 34.247 146 76 6 64 205 217 346 7.43e-12 63.9
MS.gene81566.t1 AT1G33260 34.247 146 76 6 64 205 216 345 7.55e-12 63.9
MS.gene81566.t1 AT4G23180 30.496 141 78 4 57 196 505 626 8.89e-12 64.3
MS.gene81566.t1 AT3G55450 33.094 139 68 4 62 196 271 388 1.04e-11 63.9
MS.gene81566.t1 AT2G28590 30.667 150 85 5 53 201 253 384 1.08e-11 63.5
MS.gene81566.t1 AT2G20300 30.872 149 80 5 55 198 495 625 1.13e-11 63.9
MS.gene81566.t1 AT5G37790 35.385 130 65 5 62 189 381 493 1.16e-11 63.9
MS.gene81566.t1 AT3G55450 33.094 139 68 4 62 196 234 351 1.22e-11 63.5
MS.gene81566.t1 AT5G57670 31.579 133 67 3 62 193 429 538 1.22e-11 63.5
MS.gene81566.t1 AT5G35580 31.410 156 85 3 47 198 237 374 1.26e-11 63.5
MS.gene81566.t1 AT5G35580 31.410 156 85 3 47 198 225 362 1.33e-11 63.5
MS.gene81566.t1 AT5G15730 25.641 156 87 4 62 214 271 400 1.37e-11 63.5
MS.gene81566.t1 AT5G15730 25.641 156 87 4 62 214 273 402 1.40e-11 63.5
MS.gene81566.t1 AT5G15730 25.641 156 87 4 62 214 273 402 1.40e-11 63.5
MS.gene81566.t1 AT1G16120 31.915 141 76 2 59 198 587 708 1.40e-11 63.5
MS.gene81566.t1 AT4G17660 32.934 167 81 7 47 203 240 385 1.48e-11 63.2
MS.gene81566.t1 AT4G23250 30.714 140 78 4 58 196 517 638 1.52e-11 63.5
MS.gene81566.t1 AT1G66460 33.846 130 67 4 62 189 326 438 1.55e-11 63.2
MS.gene81566.t1 AT4G23250 30.714 140 78 4 58 196 512 633 1.70e-11 63.5
MS.gene81566.t1 AT1G66460 33.846 130 67 4 62 189 299 411 1.71e-11 63.2
MS.gene81566.t1 AT1G51910 34.375 128 61 5 62 189 735 839 2.01e-11 63.2
MS.gene81566.t1 AT2G29000 30.625 160 82 6 30 186 698 831 2.08e-11 63.2
MS.gene81566.t1 AT3G21340 35.115 131 59 6 62 189 754 861 2.09e-11 63.2
MS.gene81566.t1 AT2G32800 31.496 127 69 2 64 189 703 812 2.34e-11 63.2
MS.gene81566.t1 AT4G23250 30.714 140 78 4 58 196 512 633 2.39e-11 63.2
MS.gene81566.t1 AT4G23160 29.371 143 81 3 55 196 514 637 2.40e-11 62.8
MS.gene81566.t1 AT1G07570 35.252 139 68 5 62 196 124 244 2.65e-11 62.0
MS.gene81566.t1 AT1G29730 32.374 139 71 4 54 189 793 911 2.84e-11 62.8
MS.gene81566.t1 AT4G23220 28.477 151 89 4 54 203 490 622 2.96e-11 62.8
MS.gene81566.t1 AT1G07570 35.252 139 68 5 62 196 240 360 2.98e-11 62.4
MS.gene81566.t1 AT1G07570 35.252 139 68 5 62 196 240 360 2.98e-11 62.4
MS.gene81566.t1 AT1G07570 35.252 139 68 5 62 196 240 360 2.98e-11 62.4
MS.gene81566.t1 AT1G29730 32.374 139 71 4 54 189 825 943 3.16e-11 62.8
MS.gene81566.t1 AT1G07570 35.252 139 68 5 62 196 251 371 3.87e-11 62.0
MS.gene81566.t1 AT5G56890 29.091 165 96 3 51 214 876 1020 4.26e-11 62.4
MS.gene81566.t1 AT5G59670 29.114 158 87 6 30 186 697 830 4.85e-11 62.0
MS.gene81566.t1 AT5G59670 29.114 158 87 6 30 186 697 830 4.85e-11 62.0
MS.gene81566.t1 AT4G00960 32.026 153 80 6 45 194 109 240 5.18e-11 61.2
MS.gene81566.t1 AT1G29720 32.609 138 73 4 53 189 824 942 5.32e-11 62.0
MS.gene81566.t1 AT1G19390 30.986 142 77 4 59 198 609 731 5.48e-11 62.0
MS.gene81566.t1 AT4G00960 32.026 153 80 6 45 194 116 247 5.51e-11 61.2
MS.gene81566.t1 AT1G16160 31.250 144 79 2 56 198 587 711 5.60e-11 62.0
MS.gene81566.t1 AT1G17910 30.872 149 82 4 52 198 605 734 5.71e-11 62.0
MS.gene81566.t1 AT4G11490 31.690 142 77 6 54 194 475 597 6.17e-11 61.6
MS.gene81566.t1 AT3G55550 33.094 139 69 5 54 189 500 617 6.40e-11 61.6
MS.gene81566.t1 AT2G04300 32.824 131 62 5 62 189 703 810 7.73e-11 61.6
MS.gene81566.t1 AT3G04690 33.333 156 72 8 54 201 670 801 8.82e-11 61.2
MS.gene81566.t1 AT2G04300 32.824 131 62 5 62 189 744 851 9.15e-11 61.2

Find 40 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCGAGAGCCTTGAAATT+AGG 0.241898 5.1:-68352124 MS.gene81566:CDS
CTTCATGTGGCTGGCACATT+TGG 0.267855 5.1:-68352451 MS.gene81566:CDS
CTCATTGTTGGACGACGTTT+CGG 0.283100 5.1:+68351762 None:intergenic
AAGATAGATGTATATGCTTT+TGG 0.291518 5.1:-68352206 MS.gene81566:CDS
ATAAATAAATACCTTGCTAA+TGG 0.340695 5.1:+68351889 None:intergenic
TGCAGATGGCAAAGCTTGCC+AGG 0.350525 5.1:-68351803 MS.gene81566:intron
GTATTCATCAATAGATTCAT+TGG 0.358771 5.1:+68352100 None:intergenic
AATTTCAAGGCTCTCGAATT+CGG 0.362608 5.1:+68352127 None:intergenic
ATACAAGAGCCTTGTAGCTT+TGG 0.365447 5.1:-68352081 MS.gene81566:intron
TTGGACGACGTTTCGGATCT+CGG 0.385053 5.1:+68351769 None:intergenic
TGATGAAGTTGTTGATCAAA+AGG 0.387046 5.1:-68351978 MS.gene81566:CDS
TTGTGGGGAAAGAAATGAAA+TGG 0.389379 5.1:-68353041 MS.gene81566:CDS
ATTCATTGGTCCTAATTTCA+AGG 0.412811 5.1:+68352114 None:intergenic
TGCAGCATTGAGTACTGTTA+TGG 0.427966 5.1:-68351676 MS.gene81566:CDS
ACCACAACAGCTCTCATTGT+TGG 0.443331 5.1:+68351750 None:intergenic
AATCTAGATGCACAATTTGT+GGG 0.450840 5.1:-68353057 MS.gene81566:CDS
CTTAATTCTACAATTGATGA+TGG 0.452455 5.1:-68351714 MS.gene81566:CDS
AGCTTTCTTAGACCTTCTAT+AGG 0.453151 5.1:+68351950 None:intergenic
TTATCGATCTTGATCACAGC+TGG 0.454607 5.1:+68352152 None:intergenic
CAAAAGGGAGATCCTATAGA+AGG 0.454852 5.1:-68351962 MS.gene81566:CDS
GAATCTAGATGCACAATTTG+TGG 0.462166 5.1:-68353058 MS.gene81566:CDS
GATGAAGTTGTTGATCAAAA+GGG 0.467390 5.1:-68351977 MS.gene81566:CDS
GAATAATTATCTCCTAGCCT+TGG 0.475980 5.1:+68351920 None:intergenic
TTCAATTGATTCCATTAGCA+AGG 0.503054 5.1:-68351900 MS.gene81566:intron
GGTGGTGAGTGATGATGTGT+TGG 0.508392 5.1:-68353109 MS.gene81566:CDS
TGTGGGGAAAGAAATGAAAT+GGG 0.510150 5.1:-68353040 MS.gene81566:CDS
ATTGATGATGGAAGTAGGAC+AGG 0.514529 5.1:-68351702 MS.gene81566:CDS
TCCAACAATGAGAGCTGTTG+TGG 0.527447 5.1:-68351751 MS.gene81566:CDS
GATAACACTCTTCATGTGGC+TGG 0.530674 5.1:-68352460 MS.gene81566:CDS
TATAGAAGGTCTAAGAAAGC+TGG 0.534619 5.1:-68351948 MS.gene81566:CDS
CTACAATTGATGATGGAAGT+AGG 0.540822 5.1:-68351707 MS.gene81566:CDS
ATCTCGGTTTAAGCAAGCCC+TGG 0.555542 5.1:+68351785 None:intergenic
TAAGAAAGCTGGTGGATCCA+AGG 0.564638 5.1:-68351937 MS.gene81566:CDS
GCAGATGGCAAAGCTTGCCA+GGG 0.568171 5.1:-68351802 MS.gene81566:intron
AAGCTGGTGGATCCAAGGCT+AGG 0.595101 5.1:-68351932 MS.gene81566:CDS
TAATAATTACCAAAGCTACA+AGG 0.603057 5.1:+68352072 None:intergenic
ATCTAGATGCACAATTTGTG+GGG 0.618922 5.1:-68353056 MS.gene81566:CDS
AGAAGGTCTAAGAAAGCTGG+TGG 0.624202 5.1:-68351945 MS.gene81566:CDS
AACAGATAACACTCTTCATG+TGG 0.632307 5.1:-68352464 MS.gene81566:CDS
CAGAATTCATCATACTCAGG+TGG 0.657034 5.1:+68352421 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAAAATAATAAAACAAAA+TGG - chr5.1:68351858-68351877 MS.gene81566:intron 10.0%
!! AATATATAAACACTTAGTTA+AGG + chr5.1:68352793-68352812 None:intergenic 15.0%
!! AATTGAGAATTAAAATTAGT+GGG + chr5.1:68352765-68352784 None:intergenic 15.0%
!! ATAAATAAATACCTTGCTAA+TGG + chr5.1:68352914-68352933 None:intergenic 20.0%
!! CAATTGAGAATTAAAATTAG+TGG + chr5.1:68352766-68352785 None:intergenic 20.0%
!! CACTAAGAAAAAACATTAAT+GGG - chr5.1:68352072-68352091 MS.gene81566:intron 20.0%
!! GAAAAGAAAAGAATTGAAAT+TGG - chr5.1:68351918-68351937 MS.gene81566:CDS 20.0%
!! TCACTAAGAAAAAACATTAA+TGG - chr5.1:68352071-68352090 MS.gene81566:intron 20.0%
!!! TCTTTTTATGATATAGGATT+TGG - chr5.1:68352406-68352425 MS.gene81566:intron 20.0%
!!! TGTTAAAGTTAGTGTTTTTT+TGG - chr5.1:68351809-68351828 MS.gene81566:intron 20.0%
! AAAAAAGTCAACATTGAACA+AGG + chr5.1:68352192-68352211 None:intergenic 25.0%
! CTTAATTCTACAATTGATGA+TGG - chr5.1:68353086-68353105 MS.gene81566:CDS 25.0%
! GTATTCATCAATAGATTCAT+TGG + chr5.1:68352703-68352722 None:intergenic 25.0%
! TAAATGGTAGAGTTAAACTA+AGG + chr5.1:68352538-68352557 None:intergenic 25.0%
! TAATAATTACCAAAGCTACA+AGG + chr5.1:68352731-68352750 None:intergenic 25.0%
!! AAGATAGATGTATATGCTTT+TGG - chr5.1:68352594-68352613 MS.gene81566:intron 25.0%
!! TGCTTCTCTTTTTATGATAT+AGG - chr5.1:68352400-68352419 MS.gene81566:intron 25.0%
!! TTATTACAGATTGCAGATTT+TGG - chr5.1:68352283-68352302 MS.gene81566:intron 25.0%
!!! TGTTTTGAAAAGTTGACTTT+TGG - chr5.1:68352121-68352140 MS.gene81566:CDS 25.0%
AACATTAATGGGAATGCATT+TGG - chr5.1:68352083-68352102 MS.gene81566:CDS 30.0%
AATCTAGATGCACAATTTGT+GGG - chr5.1:68351743-68351762 MS.gene81566:CDS 30.0%
ATTACTACTCAATACTCATG+TGG + chr5.1:68352468-68352487 None:intergenic 30.0%
ATTCATTGGTCCTAATTTCA+AGG + chr5.1:68352689-68352708 None:intergenic 30.0%
CATTTCTGCACAAAAGTAAA+TGG + chr5.1:68352554-68352573 None:intergenic 30.0%
GATGAAGTTGTTGATCAAAA+GGG - chr5.1:68352823-68352842 MS.gene81566:intron 30.0%
TGATGAAGTTGTTGATCAAA+AGG - chr5.1:68352822-68352841 MS.gene81566:intron 30.0%
TGTGGAAAGAAACTAAAGAA+TGG + chr5.1:68352450-68352469 None:intergenic 30.0%
! CTTTTGTGCAGAAATGTATA+CGG - chr5.1:68352558-68352577 MS.gene81566:intron 30.0%
! GGACTTTTTGGATGATTTTT+TGG - chr5.1:68351670-68351689 MS.gene81566:CDS 30.0%
! TTCAATTGATTCCATTAGCA+AGG - chr5.1:68352900-68352919 MS.gene81566:intron 30.0%
!! CTTTTTGGATGATTTTTTGG+TGG - chr5.1:68351673-68351692 MS.gene81566:CDS 30.0%
AACAGATAACACTCTTCATG+TGG - chr5.1:68352336-68352355 MS.gene81566:intron 35.0%
AAGCAGAATTCATCATACTC+AGG + chr5.1:68352385-68352404 None:intergenic 35.0%
AATGAGGAGAAAGAAAGCTT+TGG - chr5.1:68352231-68352250 MS.gene81566:CDS 35.0%
AATTCGAGAGCCTTGAAATT+AGG - chr5.1:68352676-68352695 MS.gene81566:intron 35.0%
AATTTCAAGGCTCTCGAATT+CGG + chr5.1:68352676-68352695 None:intergenic 35.0%
AGCTTTCTTAGACCTTCTAT+AGG + chr5.1:68352853-68352872 None:intergenic 35.0%
ATCTAGATGCACAATTTGTG+GGG - chr5.1:68351744-68351763 MS.gene81566:CDS 35.0%
CTTTGGTTGGGTCAAAAAAT+GGG - chr5.1:68352248-68352267 MS.gene81566:intron 35.0%
GAATAATTATCTCCTAGCCT+TGG + chr5.1:68352883-68352902 None:intergenic 35.0%
GAATCTAGATGCACAATTTG+TGG - chr5.1:68351742-68351761 MS.gene81566:CDS 35.0%
GTAGAGTTAAACTAAGGAAG+AGG + chr5.1:68352532-68352551 None:intergenic 35.0%
TATAGAAGGTCTAAGAAAGC+TGG - chr5.1:68352852-68352871 MS.gene81566:intron 35.0%
TGTGGGGAAAGAAATGAAAT+GGG - chr5.1:68351760-68351779 MS.gene81566:CDS 35.0%
TTGTGGGGAAAGAAATGAAA+TGG - chr5.1:68351759-68351778 MS.gene81566:CDS 35.0%
TTTGGTTGGGTCAAAAAATG+GGG - chr5.1:68352249-68352268 MS.gene81566:intron 35.0%
! GGGAGTTAAATGTGCATTTT+TGG - chr5.1:68351780-68351799 MS.gene81566:CDS 35.0%
! TTGCAGATTTTGGATTAACC+AGG - chr5.1:68352293-68352312 MS.gene81566:intron 35.0%
!! CTACAATTGATGATGGAAGT+AGG - chr5.1:68353093-68353112 MS.gene81566:CDS 35.0%
ATTTGCAGAATCAGTAAGCC+TGG + chr5.1:68352314-68352333 None:intergenic 40.0%
CAAAAGGGAGATCCTATAGA+AGG - chr5.1:68352838-68352857 MS.gene81566:intron 40.0%
CAGAATTCATCATACTCAGG+TGG + chr5.1:68352382-68352401 None:intergenic 40.0%
GCTTTGGTTGGGTCAAAAAA+TGG - chr5.1:68352247-68352266 MS.gene81566:intron 40.0%
TTATCGATCTTGATCACAGC+TGG + chr5.1:68352651-68352670 None:intergenic 40.0%
! AGGAGAAAGAAAGCTTTGGT+TGG - chr5.1:68352235-68352254 MS.gene81566:intron 40.0%
! ATACAAGAGCCTTGTAGCTT+TGG - chr5.1:68352719-68352738 MS.gene81566:intron 40.0%
! GGAGAAAGAAAGCTTTGGTT+GGG - chr5.1:68352236-68352255 MS.gene81566:intron 40.0%
! TGCAGCATTGAGTACTGTTA+TGG - chr5.1:68353124-68353143 MS.gene81566:CDS 40.0%
! TTTTGGTCAACTGTTGACCT+TGG - chr5.1:68352138-68352157 MS.gene81566:CDS 40.0%
!! ATTGATGATGGAAGTAGGAC+AGG - chr5.1:68353098-68353117 MS.gene81566:CDS 40.0%
ACCACAACAGCTCTCATTGT+TGG + chr5.1:68353053-68353072 None:intergenic 45.0%
AGAAGGTCTAAGAAAGCTGG+TGG - chr5.1:68352855-68352874 MS.gene81566:intron 45.0%
CAACTGTTGACCTTGGTCAA+AGG - chr5.1:68352145-68352164 MS.gene81566:CDS 45.0%
CCATCTGCAAGTGGAAAAAC+AGG + chr5.1:68352986-68353005 None:intergenic 45.0%
CTCATTGTTGGACGACGTTT+CGG + chr5.1:68353041-68353060 None:intergenic 45.0%
GATAACACTCTTCATGTGGC+TGG - chr5.1:68352340-68352359 MS.gene81566:intron 45.0%
TCCAACAATGAGAGCTGTTG+TGG - chr5.1:68353049-68353068 MS.gene81566:CDS 45.0%
! CCTTGGTCAAAGGTTGACTT+CGG - chr5.1:68352155-68352174 MS.gene81566:CDS 45.0%
! TAAGAAAGCTGGTGGATCCA+AGG - chr5.1:68352863-68352882 MS.gene81566:intron 45.0%
!! CCTGTTTTTCCACTTGCAGA+TGG - chr5.1:68352983-68353002 MS.gene81566:intron 45.0%
!! ATAAAAATGTATAAAAAAAA+AGG - chr5.1:68352021-68352040 MS.gene81566:intron 5.0%
!! TAAAAAAATTAAAAAAAATG+AGG - chr5.1:68352215-68352234 MS.gene81566:CDS 5.0%
ATCTCGGTTTAAGCAAGCCC+TGG + chr5.1:68353018-68353037 None:intergenic 50.0%
CAAGCTTTGCCATCTGCAAG+TGG + chr5.1:68352995-68353014 None:intergenic 50.0%
CCGAAGTCAACCTTTGACCA+AGG + chr5.1:68352158-68352177 None:intergenic 50.0%
CTTCATGTGGCTGGCACATT+TGG - chr5.1:68352349-68352368 MS.gene81566:intron 50.0%
TTGGACGACGTTTCGGATCT+CGG + chr5.1:68353034-68353053 None:intergenic 50.0%
! GGTGGTGAGTGATGATGTGT+TGG - chr5.1:68351691-68351710 MS.gene81566:CDS 50.0%
GCAGATGGCAAAGCTTGCCA+GGG - chr5.1:68352998-68353017 MS.gene81566:intron 55.0%
TGCAGATGGCAAAGCTTGCC+AGG - chr5.1:68352997-68353016 MS.gene81566:intron 55.0%
! AAGCTGGTGGATCCAAGGCT+AGG - chr5.1:68352868-68352887 MS.gene81566:intron 55.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 68351659 68353163 68351659 ID=MS.gene81566
chr5.1 mRNA 68351659 68353163 68351659 ID=MS.gene81566.t1;Parent=MS.gene81566
chr5.1 exon 68353021 68353163 68353021 ID=MS.gene81566.t1.exon1;Parent=MS.gene81566.t1
chr5.1 CDS 68353021 68353163 68353021 ID=cds.MS.gene81566.t1;Parent=MS.gene81566.t1
chr5.1 exon 68352436 68352507 68352436 ID=MS.gene81566.t1.exon2;Parent=MS.gene81566.t1
chr5.1 CDS 68352436 68352507 68352436 ID=cds.MS.gene81566.t1;Parent=MS.gene81566.t1
chr5.1 exon 68352082 68352253 68352082 ID=MS.gene81566.t1.exon3;Parent=MS.gene81566.t1
chr5.1 CDS 68352082 68352253 68352082 ID=cds.MS.gene81566.t1;Parent=MS.gene81566.t1
chr5.1 exon 68351901 68352002 68351901 ID=MS.gene81566.t1.exon4;Parent=MS.gene81566.t1
chr5.1 CDS 68351901 68352002 68351901 ID=cds.MS.gene81566.t1;Parent=MS.gene81566.t1
chr5.1 exon 68351659 68351820 68351659 ID=MS.gene81566.t1.exon5;Parent=MS.gene81566.t1
chr5.1 CDS 68351659 68351820 68351659 ID=cds.MS.gene81566.t1;Parent=MS.gene81566.t1
Gene Sequence

>MS.gene81566

ATGAGTTTTTGGGACTTTTTGGATGATTTTTTGGTGGTGAGTGATGATGTGTTGGATAATGATGAGTTGTTATATGTGAAGAAGAATCTAGATGCACAATTTGTGGGGAAAGAAATGAAATGGGAGTTAAATGTGCATTTTTGGTAAATTTGTTAAAGTTAGTGTTTTTTTGGTATTTTTGAAAATGAATTTTGTGACTTTGAAAATAATAAAACAAAATGGTGTAAAGTTTGTGATTTTTGTGATTAGAAATGTAATAGAAAAGAAAAGAATTGAAATTGGAATGTTTAGTGTAATGAAATTGAGCTTTCTTGAAAATGAAGTAACAAAATAAAAATGTAAAAAAAAATAAAAAAAATAAAATAAAAATGTATAAAAAAAAAGGAAAATTTGAGTTAACTTGTAAAACAAGTCACTAAGAAAAAACATTAATGGGAATGCATTTGGTGTGAAAAAAAAAATTGTTTTGAAAAGTTGACTTTTGGTCAACTGTTGACCTTGGTCAAAGGTTGACTTCGGTCAACAGTTGACCTTGTTCAATGTTGACTTTTTTAAATAAAAAAATTAAAAAAAATGAGGAGAAAGAAAGCTTTGGTTGGGTCAAAAAATGGGGTATGACACTTATTATTACAGATTGCAGATTTTGGATTAACCAGGCTTACTGATTCTGCAAATTCAACAGATAACACTCTTCATGTGGCTGGCACATTTGGTTACATGCCACCTGAGTATGATGAATTCTGCTTCTCTTTTTATGATATAGGATTTGGAATTTTGAAATCAAAGAGCCATTCTTTAGTTTCTTTCCACATGAGTATTGAGTAGTAATCAACTAGTCATAACTCATTAGATGAAAAAGTAAAAACTAGTCCTCTTCCTTAGTTTAACTCTACCATTTACTTTTGTGCAGAAATGTATACGGACGTATTTCTCGCAAGATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGCTAAACCAGCTGTGATCAAGATCGATAAAACCGAATTCGAGAGCCTTGAAATTAGGACCAATGAATCTATTGATGAATACAAGAGCCTTGTAGCTTTGGTAATTATTAATTGTTAAAGTCCCACTAATTTTAATTCTCAATTGATAACCTTAACTAAGTGTTTATATATTGTGTTAGTTTGATGAAGTTGTTGATCAAAAGGGAGATCCTATAGAAGGTCTAAGAAAGCTGGTGGATCCAAGGCTAGGAGATAATTATTCAATTGATTCCATTAGCAAGGTATTTATTTATGAATCATAAATATTTTTGATTTTCTGATTTCAGCATCAGACAAACTTTACCTGTTTTTCCACTTGCAGATGGCAAAGCTTGCCAGGGCTTGCTTAAACCGAGATCCGAAACGTCGTCCAACAATGAGAGCTGTTGTGGTTTATCTAATGACACTTAATTCTACAATTGATGATGGAAGTAGGACAGGCAGTGCAGCATTGAGTACTGTTATGGAGCATGACTCAAATTGA
Protein sequence

>MS.gene81566.t1

MSFWDFLDDFLVVSDDVLDNDELLYVKKNLDAQFVGKEMKWELNVHFWLTDSANSTDNTLHVAGTFGYMPPENVYGRISRKIDVYAFGVVLYELISAKPAVIKIDKTEFESLEIRTNESIDEYKSLVALFDEVVDQKGDPIEGLRKLVDPRLGDNYSIDSISKMAKLARACLNRDPKRRPTMRAVVVYLMTLNSTIDDGSRTGSAALSTVMEHDSN