Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81719.t1 | XP_024630856.1 | 76.4 | 776 | 32 | 3 | 135 | 786 | 4 | 752 | 0.00E+00 | 1127.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81719.t1 | Q9SZL8 | 28.1 | 577 | 286 | 9 | 128 | 577 | 60 | 634 | 8.9e-65 | 250.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81719.t1 | A0A2Z6P9Q3 | 64.5 | 803 | 148 | 10 | 108 | 780 | 30 | 825 | 1.2e-275 | 958.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene81719.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81719.t1 | MTR_7g446060 | 77.174 | 92 | 20 | 1 | 217 | 308 | 1 | 91 | 1.64e-41 | 148 |
| MS.gene81719.t1 | MTR_6g051425 | 30.451 | 266 | 164 | 3 | 137 | 386 | 10 | 270 | 7.37e-34 | 133 |
| MS.gene81719.t1 | MTR_2g090105 | 43.750 | 192 | 81 | 7 | 596 | 782 | 16 | 185 | 1.78e-33 | 127 |
| MS.gene81719.t1 | MTR_7g031620 | 61.728 | 81 | 31 | 0 | 147 | 227 | 2 | 82 | 1.36e-28 | 109 |
| MS.gene81719.t1 | MTR_0558s0020 | 27.481 | 262 | 157 | 5 | 145 | 378 | 40 | 296 | 3.91e-24 | 103 |
| MS.gene81719.t1 | MTR_0856s0010 | 40.441 | 136 | 77 | 3 | 135 | 267 | 26 | 160 | 6.32e-23 | 96.3 |
| MS.gene81719.t1 | MTR_4g035820 | 30.888 | 259 | 153 | 9 | 141 | 382 | 75 | 324 | 2.63e-21 | 99.8 |
| MS.gene81719.t1 | MTR_1g008290 | 35.616 | 146 | 89 | 4 | 190 | 334 | 3 | 144 | 2.92e-21 | 91.3 |
| MS.gene81719.t1 | MTR_8g446020 | 28.177 | 181 | 125 | 2 | 201 | 378 | 78 | 256 | 1.42e-19 | 89.7 |
| MS.gene81719.t1 | MTR_7g446510 | 30.723 | 166 | 115 | 0 | 223 | 388 | 166 | 331 | 3.21e-17 | 84.3 |
| MS.gene81719.t1 | MTR_6g090505 | 27.778 | 180 | 125 | 2 | 201 | 377 | 53 | 230 | 1.00e-16 | 83.2 |
| MS.gene81719.t1 | MTR_1g083640 | 25.000 | 240 | 147 | 5 | 138 | 349 | 48 | 282 | 1.42e-16 | 81.3 |
| MS.gene81719.t1 | MTR_7g446480 | 30.723 | 166 | 115 | 0 | 223 | 388 | 151 | 316 | 2.90e-16 | 81.3 |
| MS.gene81719.t1 | MTR_1g070355 | 27.350 | 234 | 160 | 6 | 146 | 372 | 79 | 309 | 3.43e-16 | 83.2 |
| MS.gene81719.t1 | MTR_1g013060 | 27.928 | 222 | 144 | 5 | 130 | 338 | 11 | 229 | 5.35e-15 | 75.5 |
| MS.gene81719.t1 | MTR_2g098880 | 30.400 | 125 | 71 | 3 | 140 | 253 | 72 | 191 | 3.38e-12 | 68.2 |
| MS.gene81719.t1 | MTR_2g098880 | 30.400 | 125 | 71 | 3 | 140 | 253 | 60 | 179 | 3.58e-12 | 67.8 |
| MS.gene81719.t1 | MTR_7g446520 | 24.066 | 241 | 161 | 4 | 145 | 380 | 92 | 315 | 7.26e-12 | 67.8 |
| MS.gene81719.t1 | MTR_3g450850 | 24.896 | 241 | 159 | 7 | 144 | 366 | 50 | 286 | 6.01e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81719.t1 | AT4G15090 | 30.839 | 441 | 269 | 7 | 123 | 528 | 33 | 472 | 1.29e-68 | 243 |
| MS.gene81719.t1 | AT4G15090 | 30.839 | 441 | 269 | 7 | 123 | 528 | 33 | 472 | 1.29e-68 | 243 |
| MS.gene81719.t1 | AT4G15090 | 30.839 | 441 | 269 | 7 | 123 | 528 | 33 | 472 | 1.29e-68 | 243 |
| MS.gene81719.t1 | AT4G15090 | 30.839 | 441 | 269 | 7 | 123 | 528 | 33 | 472 | 1.29e-68 | 243 |
| MS.gene81719.t1 | AT4G15090 | 30.839 | 441 | 269 | 7 | 123 | 528 | 33 | 472 | 1.29e-68 | 243 |
| MS.gene81719.t1 | AT4G38180 | 32.151 | 423 | 251 | 6 | 128 | 515 | 60 | 481 | 1.01e-67 | 239 |
| MS.gene81719.t1 | AT1G52520 | 32.767 | 412 | 229 | 8 | 137 | 515 | 81 | 477 | 5.46e-63 | 224 |
| MS.gene81719.t1 | AT1G52520 | 47.945 | 73 | 32 | 3 | 506 | 578 | 573 | 639 | 5.60e-12 | 69.7 |
| MS.gene81719.t1 | AT1G76320 | 32.754 | 403 | 230 | 7 | 145 | 515 | 1 | 394 | 5.75e-63 | 224 |
| MS.gene81719.t1 | AT1G76320 | 32.754 | 403 | 230 | 7 | 145 | 515 | 1 | 394 | 1.05e-62 | 224 |
| MS.gene81719.t1 | AT1G76320 | 32.754 | 403 | 230 | 7 | 145 | 515 | 1 | 394 | 1.05e-62 | 224 |
| MS.gene81719.t1 | AT1G76320 | 32.754 | 403 | 230 | 7 | 145 | 515 | 1 | 394 | 1.17e-62 | 224 |
| MS.gene81719.t1 | AT1G80010 | 31.591 | 421 | 235 | 10 | 128 | 503 | 78 | 490 | 5.91e-58 | 211 |
| MS.gene81719.t1 | AT3G22170 | 29.742 | 427 | 232 | 8 | 134 | 515 | 63 | 466 | 7.82e-57 | 209 |
| MS.gene81719.t1 | AT3G22170 | 29.742 | 427 | 232 | 8 | 134 | 515 | 63 | 466 | 7.82e-57 | 209 |
| MS.gene81719.t1 | AT2G27110 | 30.569 | 422 | 238 | 6 | 116 | 505 | 20 | 418 | 7.71e-54 | 201 |
| MS.gene81719.t1 | AT2G27110 | 30.569 | 422 | 238 | 6 | 116 | 505 | 20 | 418 | 7.71e-54 | 201 |
| MS.gene81719.t1 | AT4G19990 | 27.928 | 444 | 214 | 8 | 144 | 528 | 24 | 420 | 8.84e-50 | 187 |
| MS.gene81719.t1 | AT4G19990 | 27.928 | 444 | 214 | 8 | 144 | 528 | 24 | 420 | 8.84e-50 | 187 |
| MS.gene81719.t1 | AT4G19990 | 27.928 | 444 | 214 | 8 | 144 | 528 | 24 | 420 | 1.01e-49 | 187 |
| MS.gene81719.t1 | AT4G19990 | 27.928 | 444 | 214 | 8 | 144 | 528 | 38 | 434 | 1.11e-49 | 187 |
| MS.gene81719.t1 | AT4G19990 | 27.928 | 444 | 214 | 8 | 144 | 528 | 24 | 420 | 1.14e-49 | 187 |
| MS.gene81719.t1 | AT4G19990 | 27.928 | 444 | 214 | 8 | 144 | 528 | 24 | 420 | 1.14e-49 | 187 |
| MS.gene81719.t1 | AT4G19990 | 28.822 | 399 | 204 | 8 | 163 | 528 | 12 | 363 | 1.07e-47 | 181 |
| MS.gene81719.t1 | AT2G32250 | 29.070 | 430 | 230 | 9 | 140 | 535 | 37 | 425 | 2.35e-46 | 177 |
| MS.gene81719.t1 | AT2G32250 | 29.070 | 430 | 230 | 9 | 140 | 535 | 37 | 425 | 3.31e-46 | 177 |
| MS.gene81719.t1 | AT2G32250 | 29.070 | 430 | 230 | 9 | 140 | 535 | 37 | 425 | 3.31e-46 | 177 |
| MS.gene81719.t1 | AT2G32250 | 29.070 | 430 | 230 | 9 | 140 | 535 | 37 | 425 | 3.45e-46 | 177 |
| MS.gene81719.t1 | AT2G32250 | 29.070 | 430 | 230 | 9 | 140 | 535 | 37 | 425 | 3.45e-46 | 177 |
| MS.gene81719.t1 | AT2G32250 | 29.070 | 430 | 230 | 9 | 140 | 535 | 37 | 425 | 3.45e-46 | 177 |
| MS.gene81719.t1 | AT2G32250 | 28.941 | 425 | 227 | 9 | 145 | 535 | 1 | 384 | 2.07e-45 | 175 |
| MS.gene81719.t1 | AT2G32250 | 28.941 | 425 | 227 | 9 | 145 | 535 | 1 | 384 | 2.09e-45 | 175 |
| MS.gene81719.t1 | AT2G27110 | 33.209 | 268 | 143 | 3 | 266 | 505 | 14 | 273 | 1.49e-43 | 169 |
| MS.gene81719.t1 | AT3G06250 | 27.000 | 400 | 224 | 8 | 131 | 501 | 180 | 540 | 2.66e-43 | 168 |
| MS.gene81719.t1 | AT3G06250 | 27.000 | 400 | 224 | 8 | 131 | 501 | 180 | 540 | 2.66e-43 | 168 |
| MS.gene81719.t1 | AT3G06250 | 27.000 | 400 | 224 | 8 | 131 | 501 | 180 | 540 | 2.66e-43 | 168 |
| MS.gene81719.t1 | AT5G18960 | 27.551 | 392 | 217 | 12 | 140 | 501 | 210 | 564 | 2.35e-40 | 159 |
| MS.gene81719.t1 | AT5G18960 | 27.551 | 392 | 217 | 12 | 140 | 501 | 210 | 564 | 2.35e-40 | 159 |
| MS.gene81719.t1 | AT1G10240 | 27.273 | 418 | 241 | 13 | 141 | 508 | 48 | 452 | 1.49e-38 | 153 |
| MS.gene81719.t1 | AT1G10240 | 27.273 | 418 | 241 | 13 | 141 | 508 | 48 | 452 | 1.49e-38 | 153 |
| MS.gene81719.t1 | AT4G38170 | 30.085 | 236 | 132 | 4 | 313 | 519 | 19 | 250 | 4.50e-29 | 123 |
| MS.gene81719.t1 | AT5G28530 | 23.333 | 420 | 257 | 11 | 141 | 505 | 55 | 464 | 7.74e-26 | 114 |
| MS.gene81719.t1 | AT5G28530 | 23.333 | 420 | 257 | 11 | 141 | 505 | 55 | 464 | 8.64e-26 | 114 |
| MS.gene81719.t1 | AT5G28530 | 23.333 | 420 | 257 | 11 | 141 | 505 | 55 | 464 | 8.64e-26 | 114 |
Find 104 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTGTTTATTTGAGTTTA+AGG | 0.126982 | 1.3:-43969637 | MS.gene81719:CDS |
| CTTGAACTGGATGCTAAAAT+AGG | 0.226174 | 1.3:+43971435 | None:intergenic |
| AAGAATTATGCAAGATGTTT+AGG | 0.244212 | 1.3:-43971145 | MS.gene81719:CDS |
| TATGCAAGATGTTTAGGTTT+TGG | 0.256539 | 1.3:-43971139 | MS.gene81719:CDS |
| TCCATCCTGGTCAGTAATTA+TGG | 0.258712 | 1.3:+43970349 | None:intergenic |
| TTTGAGCATAAGTGATTTCA+TGG | 0.262311 | 1.3:-43970177 | MS.gene81719:CDS |
| TGTATGTGAGAGACACATTT+TGG | 0.270477 | 1.3:-43970064 | MS.gene81719:CDS |
| CACCATCGATGGCGAGCTTT+CGG | 0.279320 | 1.3:+43970296 | None:intergenic |
| TGGAACAATTACTATTTCTA+AGG | 0.295449 | 1.3:-43970951 | MS.gene81719:CDS |
| GGAAATCAAATTTCAATTGA+TGG | 0.300295 | 1.3:+43971457 | None:intergenic |
| AGGGCTGCTTATGAGTATTT+TGG | 0.315150 | 1.3:-43970563 | MS.gene81719:CDS |
| TGAAGAAGCAAATCCGTAAA+AGG | 0.325895 | 1.3:+43969431 | None:intergenic |
| TGCTGTTTATTTGAGTTTAA+GGG | 0.334665 | 1.3:-43969636 | MS.gene81719:CDS |
| CTAAAATATCTTGATTTGCT+TGG | 0.342688 | 1.3:+43970896 | None:intergenic |
| ATATAGACCCTAGTATAAAA+AGG | 0.351811 | 1.3:-43970862 | MS.gene81719:CDS |
| ACGCTGCAACTCTTCATTTC+CGG | 0.353530 | 1.3:+43969473 | None:intergenic |
| GAACAAAATCAGAACATATA+AGG | 0.353968 | 1.3:+43971583 | None:intergenic |
| CTTACTATTGTCTCTTGAAC+TGG | 0.373416 | 1.3:+43971422 | None:intergenic |
| ACCATCGATGGCGAGCTTTC+GGG | 0.381382 | 1.3:+43970297 | None:intergenic |
| AAAATATCTTGATGTTAATC+AGG | 0.381504 | 1.3:-43968918 | MS.gene81719:intron |
| TTGTGTTACAGAAAGTAAAA+AGG | 0.383201 | 1.3:-43969730 | MS.gene81719:intron |
| CTTGTGGCATATAATGAAAA+AGG | 0.386165 | 1.3:-43970273 | MS.gene81719:CDS |
| TAGAATAGAGAACTTAAAAC+TGG | 0.390920 | 1.3:-43969370 | MS.gene81719:CDS |
| TTGAACTGGATGCTAAAATA+GGG | 0.396461 | 1.3:+43971436 | None:intergenic |
| TCTTGAACTTTAGATATATT+AGG | 0.399915 | 1.3:+43969043 | None:intergenic |
| ATGATGAATGATCATTTATA+TGG | 0.403678 | 1.3:+43968660 | None:intergenic |
| AATCAGAACATATAAGGTTA+TGG | 0.408232 | 1.3:+43971589 | None:intergenic |
| GGATATGATAACCTTACATT+CGG | 0.409109 | 1.3:-43970767 | MS.gene81719:CDS |
| AAGGGCGTCCTCCTTCAAAA+AGG | 0.415773 | 1.3:-43969248 | MS.gene81719:CDS |
| TTAAATTTCATGCCAACCTT+AGG | 0.424975 | 1.3:+43971196 | None:intergenic |
| GTTTGATGAGCGTCATCGTT+GGG | 0.431278 | 1.3:-43970093 | MS.gene81719:CDS |
| AAGTGAGGCGGCTTCGACTT+GGG | 0.432744 | 1.3:-43970715 | MS.gene81719:CDS |
| ATATTTATTTGTTAAGTAAG+TGG | 0.436838 | 1.3:+43970520 | None:intergenic |
| TTAATATCCTTCCTCCATCT+TGG | 0.438245 | 1.3:+43969537 | None:intergenic |
| CTTGTTATATATTGCCAAGA+TGG | 0.439590 | 1.3:-43969551 | MS.gene81719:CDS |
| AAGAAGCTTGCTGGAAAGAA+AGG | 0.445180 | 1.3:-43969195 | MS.gene81719:CDS |
| CATTCTTCATTGCTCCATCC+TGG | 0.449843 | 1.3:+43970336 | None:intergenic |
| CATGATAATGAATGGTTGAA+AGG | 0.452805 | 1.3:-43970119 | MS.gene81719:CDS |
| GATATGATAACCTTACATTC+GGG | 0.457280 | 1.3:-43970766 | MS.gene81719:CDS |
| CAAATTTCAATTGATGGTTG+AGG | 0.460215 | 1.3:+43971463 | None:intergenic |
| ATGATCATTCATCATCATGA+TGG | 0.461994 | 1.3:-43968652 | None:intergenic |
| TCTATGCTTTGAGAAGAATA+TGG | 0.462169 | 1.3:+43968806 | None:intergenic |
| GAATTAAAAGTAAAGGCAAC+AGG | 0.475403 | 1.3:+43971362 | None:intergenic |
| ACTCCAACAAAAGGAGCAAA+AGG | 0.476605 | 1.3:+43970491 | None:intergenic |
| AGATATACACTTATTAAAAG+TGG | 0.483850 | 1.3:-43969510 | MS.gene81719:CDS |
| TTTGGGCAGATGCGAGATGT+AGG | 0.485083 | 1.3:-43970583 | MS.gene81719:CDS |
| ATCAACTGAATTAAAAGTAA+AGG | 0.485213 | 1.3:+43971355 | None:intergenic |
| CTTGTAGCGACTCGAAGTAA+AGG | 0.486295 | 1.3:-43969267 | MS.gene81719:CDS |
| TACTTACATTAATCCCAGCT+TGG | 0.488151 | 1.3:+43970822 | None:intergenic |
| TAGCATGAAAACACACTGTA+AGG | 0.490277 | 1.3:-43971002 | MS.gene81719:CDS |
| AGTTAAAGACATAATGTTCA+AGG | 0.493487 | 1.3:-43969697 | MS.gene81719:CDS |
| TCCCGAAAGCTCGCCATCGA+TGG | 0.503126 | 1.3:-43970298 | MS.gene81719:CDS |
| TTTGTTGGAGTAAATCATCA+TGG | 0.506547 | 1.3:-43970479 | MS.gene81719:intron |
| AGGCGGCTTCGACTTGGGAC+AGG | 0.507987 | 1.3:-43970710 | MS.gene81719:CDS |
| GTCAATCACATCAAGATCAA+TGG | 0.511334 | 1.3:+43968994 | None:intergenic |
| TTGTAGCGACTCGAAGTAAA+GGG | 0.511768 | 1.3:-43969266 | MS.gene81719:CDS |
| TTGGGCAGATGCGAGATGTA+GGG | 0.512318 | 1.3:-43970582 | MS.gene81719:CDS |
| TGATGATTTACTCCAACAAA+AGG | 0.515106 | 1.3:+43970482 | None:intergenic |
| TGTTTGATGAGCGTCATCGT+TGG | 0.518510 | 1.3:-43970094 | MS.gene81719:CDS |
| AAAGTGAGGCGGCTTCGACT+TGG | 0.518819 | 1.3:-43970716 | MS.gene81719:CDS |
| GACGACAACGAGTTTGAAAA+CGG | 0.527121 | 1.3:+43971525 | None:intergenic |
| CGGCGGTGAATGTTGGTAAC+CGG | 0.527849 | 1.3:+43971545 | None:intergenic |
| TTGGAGGTTAATGACCAAGC+TGG | 0.528235 | 1.3:-43970836 | MS.gene81719:CDS |
| ATGATAATGAATGGTTGAAA+GGG | 0.531139 | 1.3:-43970118 | MS.gene81719:CDS |
| AAATGATTTATCAAAAGTAA+TGG | 0.531224 | 1.3:-43969394 | MS.gene81719:CDS |
| AACATATAAGGTTATGGAGA+AGG | 0.534401 | 1.3:+43971595 | None:intergenic |
| TGGAGGTTAATGACCAAGCT+GGG | 0.539674 | 1.3:-43970835 | MS.gene81719:CDS |
| CTCGCCATCGATGGTGCTTG+TGG | 0.540244 | 1.3:-43970289 | MS.gene81719:CDS |
| TACTCACATAGCTTCTTGCA+CGG | 0.540398 | 1.3:+43971053 | None:intergenic |
| ATGAACTTCATGATAATGAA+TGG | 0.543870 | 1.3:-43970127 | MS.gene81719:CDS |
| AAATGAAGATGATGAACCTA+AGG | 0.544931 | 1.3:-43971212 | MS.gene81719:CDS |
| TTGAAAACGGCGGTGAATGT+TGG | 0.547831 | 1.3:+43971538 | None:intergenic |
| AAGTGATTTCATGGAGAAGT+GGG | 0.549527 | 1.3:-43970168 | MS.gene81719:CDS |
| GAAGATGATGAACCTAAGGT+TGG | 0.554642 | 1.3:-43971208 | MS.gene81719:CDS |
| AAATCCGTAAAAGGCATCGC+AGG | 0.562477 | 1.3:+43969440 | None:intergenic |
| TAAGTGATTTCATGGAGAAG+TGG | 0.562788 | 1.3:-43970169 | MS.gene81719:CDS |
| GTTCAACAACACAAACTCAC+CGG | 0.564921 | 1.3:-43971564 | MS.gene81719:CDS |
| ATGGCGAGCTTTCGGGAAGA+CGG | 0.568527 | 1.3:+43970304 | None:intergenic |
| AATGTATGTGTGTCTTCAGA+TGG | 0.571681 | 1.3:-43970971 | MS.gene81719:CDS |
| TGGTCAGTAATTATGGCTTG+TGG | 0.579259 | 1.3:+43970356 | None:intergenic |
| GTTATATATTGCCAAGATGG+AGG | 0.585753 | 1.3:-43969548 | MS.gene81719:CDS |
| TGTTAAGTAAGTGGTGTCGA+AGG | 0.588670 | 1.3:+43970529 | None:intergenic |
| GAAACTACATTGACAAAGTG+AGG | 0.593331 | 1.3:-43970730 | MS.gene81719:CDS |
| TATATTGCCAAGATGGAGGA+AGG | 0.599926 | 1.3:-43969544 | MS.gene81719:CDS |
| CACTTATCAAAGTCAAGAAG+AGG | 0.608354 | 1.3:-43969148 | MS.gene81719:intron |
| TCTTGGCAATATATAACAAG+AGG | 0.613918 | 1.3:+43969554 | None:intergenic |
| CATGAAATTTAATTCTACAG+AGG | 0.616241 | 1.3:-43971185 | MS.gene81719:CDS |
| GTTCTAAATATGAAACATTG+TGG | 0.622522 | 1.3:+43968783 | None:intergenic |
| ACTTGGTTAGAATGTATGCG+TGG | 0.623148 | 1.3:-43970386 | MS.gene81719:intron |
| ACAAGCCATAATTACTGACC+AGG | 0.626330 | 1.3:-43970354 | MS.gene81719:CDS |
| AGCAATGAAGAATGCAGTTG+AGG | 0.631682 | 1.3:-43970327 | MS.gene81719:CDS |
| AATGTGTCTCTCACATACAC+AGG | 0.631924 | 1.3:+43970068 | None:intergenic |
| GCCATAATTACTGACCAGGA+TGG | 0.636449 | 1.3:-43970350 | MS.gene81719:CDS |
| TCTATGGTTGTTGAAGCAAG+TGG | 0.641961 | 1.3:-43970788 | MS.gene81719:CDS |
| CTTGGTTAGAATGTATGCGT+GGG | 0.645599 | 1.3:-43970385 | MS.gene81719:intron |
| CTTGGCAATATATAACAAGA+GGG | 0.647143 | 1.3:+43969555 | None:intergenic |
| TCACATAAATGAAAATTGTG+AGG | 0.656952 | 1.3:-43971248 | MS.gene81719:CDS |
| TATGCCACAAGCACCATCGA+TGG | 0.658002 | 1.3:+43970285 | None:intergenic |
| ATATATGGAAGAGACAATCA+CGG | 0.693219 | 1.3:-43971655 | None:intergenic |
| CTGTGAGCTTAAGAACACAA+AGG | 0.694006 | 1.3:+43969595 | None:intergenic |
| GTAGCAATGCTGATAAACAG+AGG | 0.712390 | 1.3:+43971491 | None:intergenic |
| ATATGATAACCTTACATTCG+GGG | 0.715139 | 1.3:-43970765 | MS.gene81719:CDS |
| ACTACATTGACAAAGTGAGG+CGG | 0.739143 | 1.3:-43970727 | MS.gene81719:CDS |
| GACAACGAGTTTGAAAACGG+CGG | 0.794970 | 1.3:+43971528 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATATGTGTAAATAAAAT+TGG | + | chr1.3:43971434-43971453 | None:intergenic | 10.0% |
| !!! | ATTTATTTATTTTTATGTAG+GGG | - | chr1.3:43971240-43971259 | MS.gene81719:CDS | 10.0% |
| !! | AAATGATTTATCAAAAGTAA+TGG | - | chr1.3:43970912-43970931 | MS.gene81719:CDS | 15.0% |
| !! | ATTGAAAGATAAAATTGAAA+AGG | - | chr1.3:43970372-43970391 | MS.gene81719:CDS | 15.0% |
| !! | TAAAATTGAAAAGGAAAATA+TGG | - | chr1.3:43970381-43970400 | MS.gene81719:intron | 15.0% |
| !!! | ATATTTATTTGTTAAGTAAG+TGG | + | chr1.3:43969789-43969808 | None:intergenic | 15.0% |
| !!! | TAGTGAATTTTATTATGTAA+TGG | - | chr1.3:43969667-43969686 | MS.gene81719:CDS | 15.0% |
| !!! | TCTAACAAAATAATTTTGAA+TGG | + | chr1.3:43969633-43969652 | None:intergenic | 15.0% |
| !!! | TTAATGTAAGTAGAAATTTT+CGG | - | chr1.3:43969495-43969514 | MS.gene81719:CDS | 15.0% |
| !! | AAAATATCTTGATGTTAATC+AGG | - | chr1.3:43971388-43971407 | MS.gene81719:intron | 20.0% |
| !! | AGATATACACTTATTAAAAG+TGG | - | chr1.3:43970796-43970815 | MS.gene81719:CDS | 20.0% |
| !! | ATAACTCATTCAAAATCTAT+TGG | - | chr1.3:43971468-43971487 | MS.gene81719:CDS | 20.0% |
| !! | ATCAACTGAATTAAAAGTAA+AGG | + | chr1.3:43968954-43968973 | None:intergenic | 20.0% |
| !! | ATGATGAATGATCATTTATA+TGG | + | chr1.3:43971649-43971668 | None:intergenic | 20.0% |
| !! | ATTTGAATCTCAATTTCAAA+AGG | - | chr1.3:43970453-43970472 | MS.gene81719:intron | 20.0% |
| !! | TATACAAGCAATAATTCTAT+TGG | + | chr1.3:43970422-43970441 | None:intergenic | 20.0% |
| !! | TCTTGAACTTTAGATATATT+AGG | + | chr1.3:43971266-43971285 | None:intergenic | 20.0% |
| !!! | ACATCAAGATATTTTTGATT+TGG | + | chr1.3:43971383-43971402 | None:intergenic | 20.0% |
| !!! | ATACATTTTATTACGTGTAA+AGG | + | chr1.3:43971215-43971234 | None:intergenic | 20.0% |
| !!! | ATATTTTTGATTTGGATTGA+AGG | + | chr1.3:43971375-43971394 | None:intergenic | 20.0% |
| !!! | ATTCAAAATCTATTGGTTTT+AGG | - | chr1.3:43971475-43971494 | MS.gene81719:CDS | 20.0% |
| !!! | ATTTGGCTTTAAAAGATTTT+TGG | + | chr1.3:43969282-43969301 | None:intergenic | 20.0% |
| !!! | ATTTTATTATGTAATGGATG+TGG | - | chr1.3:43969673-43969692 | MS.gene81719:CDS | 20.0% |
| !!! | GAAAAAAGTATTTTACTCTA+GGG | - | chr1.3:43969225-43969244 | MS.gene81719:CDS | 20.0% |
| !!! | TAAAAAATTTGTTGCATTAG+TGG | - | chr1.3:43968992-43969011 | MS.gene81719:CDS | 20.0% |
| !!! | TATTTTTGATTTGGATTGAA+GGG | + | chr1.3:43971374-43971393 | None:intergenic | 20.0% |
| !!! | TTCATATTTAGAACTTTTAC+AGG | - | chr1.3:43971532-43971551 | MS.gene81719:CDS | 20.0% |
| !!! | TTGATAAATCATTTTCAGTA+TGG | + | chr1.3:43970906-43970925 | None:intergenic | 20.0% |
| ! | AAGAATTATGCAAGATGTTT+AGG | - | chr1.3:43969161-43969180 | MS.gene81719:CDS | 25.0% |
| ! | AATCAGAACATATAAGGTTA+TGG | + | chr1.3:43968720-43968739 | None:intergenic | 25.0% |
| ! | AGTTAAAGACATAATGTTCA+AGG | - | chr1.3:43970609-43970628 | MS.gene81719:CDS | 25.0% |
| ! | ATATAGACCCTAGTATAAAA+AGG | - | chr1.3:43969444-43969463 | MS.gene81719:CDS | 25.0% |
| ! | CATGAAATTTAATTCTACAG+AGG | - | chr1.3:43969121-43969140 | MS.gene81719:intron | 25.0% |
| ! | GAACAAAATCAGAACATATA+AGG | + | chr1.3:43968726-43968745 | None:intergenic | 25.0% |
| ! | GGAAATCAAATTTCAATTGA+TGG | + | chr1.3:43968852-43968871 | None:intergenic | 25.0% |
| ! | TAGAATAGAGAACTTAAAAC+TGG | - | chr1.3:43970936-43970955 | MS.gene81719:CDS | 25.0% |
| ! | TCACATAAATGAAAATTGTG+AGG | - | chr1.3:43969058-43969077 | MS.gene81719:intron | 25.0% |
| ! | TTGTGTTACAGAAAGTAAAA+AGG | - | chr1.3:43970576-43970595 | MS.gene81719:CDS | 25.0% |
| !! | AAACTCTTTGAATTTTGCAT+TGG | + | chr1.3:43970485-43970504 | None:intergenic | 25.0% |
| !! | ATGAACTTCATGATAATGAA+TGG | - | chr1.3:43970179-43970198 | MS.gene81719:CDS | 25.0% |
| !! | ATGATAATGAATGGTTGAAA+GGG | - | chr1.3:43970188-43970207 | MS.gene81719:CDS | 25.0% |
| !! | ATGCTGTTTATTTGAGTTTA+AGG | - | chr1.3:43970669-43970688 | MS.gene81719:CDS | 25.0% |
| !! | ATTGCTTGTATAAGTCATTT+TGG | - | chr1.3:43970430-43970449 | MS.gene81719:intron | 25.0% |
| !! | GTTCTAAATATGAAACATTG+TGG | + | chr1.3:43971526-43971545 | None:intergenic | 25.0% |
| !! | TGCTGTTTATTTGAGTTTAA+GGG | - | chr1.3:43970670-43970689 | MS.gene81719:CDS | 25.0% |
| !!! | AGGATACTAAAACTTTTTCT+TGG | - | chr1.3:43969888-43969907 | MS.gene81719:intron | 25.0% |
| !!! | CTAAAATATCTTGATTTGCT+TGG | + | chr1.3:43969413-43969432 | None:intergenic | 25.0% |
| !!! | GGAAAAAAGTATTTTACTCT+AGG | - | chr1.3:43969224-43969243 | MS.gene81719:CDS | 25.0% |
| !!! | TCGTTTACGAAATGTTTTTT+GGG | - | chr1.3:43969706-43969725 | MS.gene81719:CDS | 25.0% |
| !!! | TGGAACAATTACTATTTCTA+AGG | - | chr1.3:43969355-43969374 | MS.gene81719:CDS | 25.0% |
| AAATGAAGATGATGAACCTA+AGG | - | chr1.3:43969094-43969113 | MS.gene81719:intron | 30.0% | |
| AACATATAAGGTTATGGAGA+AGG | + | chr1.3:43968714-43968733 | None:intergenic | 30.0% | |
| AGCACAATCAGTACAAAAAA+GGG | - | chr1.3:43969194-43969213 | MS.gene81719:CDS | 30.0% | |
| ATATGATAACCTTACATTCG+GGG | - | chr1.3:43969541-43969560 | MS.gene81719:CDS | 30.0% | |
| CTTGGCAATATATAACAAGA+GGG | + | chr1.3:43970754-43970773 | None:intergenic | 30.0% | |
| CTTGTGGCATATAATGAAAA+AGG | - | chr1.3:43970033-43970052 | MS.gene81719:CDS | 30.0% | |
| GAATTAAAAGTAAAGGCAAC+AGG | + | chr1.3:43968947-43968966 | None:intergenic | 30.0% | |
| GATATGATAACCTTACATTC+GGG | - | chr1.3:43969540-43969559 | MS.gene81719:CDS | 30.0% | |
| GGATATGATAACCTTACATT+CGG | - | chr1.3:43969539-43969558 | MS.gene81719:CDS | 30.0% | |
| TAGCACAATCAGTACAAAAA+AGG | - | chr1.3:43969193-43969212 | MS.gene81719:CDS | 30.0% | |
| TAGTATAAAAAGGAGATTGG+AGG | - | chr1.3:43969454-43969473 | MS.gene81719:CDS | 30.0% | |
| TCTTGGCAATATATAACAAG+AGG | + | chr1.3:43970755-43970774 | None:intergenic | 30.0% | |
| TGATGATTTACTCCAACAAA+AGG | + | chr1.3:43969827-43969846 | None:intergenic | 30.0% | |
| TTAAATTTCATGCCAACCTT+AGG | + | chr1.3:43969113-43969132 | None:intergenic | 30.0% | |
| TTGAACTGGATGCTAAAATA+GGG | + | chr1.3:43968873-43968892 | None:intergenic | 30.0% | |
| TTTGAGCATAAGTGATTTCA+TGG | - | chr1.3:43970129-43970148 | MS.gene81719:CDS | 30.0% | |
| TTTGTTGGAGTAAATCATCA+TGG | - | chr1.3:43969827-43969846 | MS.gene81719:intron | 30.0% | |
| ! | AAGTAGAAATTTTCGGTCTA+TGG | - | chr1.3:43969502-43969521 | MS.gene81719:CDS | 30.0% |
| ! | CAAAATACTTTTGCATGATG+CGG | - | chr1.3:43970096-43970115 | MS.gene81719:CDS | 30.0% |
| ! | CAAATTTCAATTGATGGTTG+AGG | + | chr1.3:43968846-43968865 | None:intergenic | 30.0% |
| ! | CATGATAATGAATGGTTGAA+AGG | - | chr1.3:43970187-43970206 | MS.gene81719:CDS | 30.0% |
| ! | CCAATCTCCTTTTTATACTA+GGG | + | chr1.3:43969454-43969473 | None:intergenic | 30.0% |
| ! | CTTGTTATATATTGCCAAGA+TGG | - | chr1.3:43970755-43970774 | MS.gene81719:CDS | 30.0% |
| ! | TCCAATCTCCTTTTTATACT+AGG | + | chr1.3:43969455-43969474 | None:intergenic | 30.0% |
| !! | TATGCAAGATGTTTAGGTTT+TGG | - | chr1.3:43969167-43969186 | MS.gene81719:CDS | 30.0% |
| !! | TCTATGCTTTGAGAAGAATA+TGG | + | chr1.3:43971503-43971522 | None:intergenic | 30.0% |
| !!! | AGTATGAACGCATTTTTTGA+TGG | - | chr1.3:43970295-43970314 | MS.gene81719:CDS | 30.0% |
| !!! | GTCGTTTACGAAATGTTTTT+TGG | - | chr1.3:43969705-43969724 | MS.gene81719:CDS | 30.0% |
| AAGTGATTTCATGGAGAAGT+GGG | - | chr1.3:43970138-43970157 | MS.gene81719:CDS | 35.0% | |
| AATGTATGTGTGTCTTCAGA+TGG | - | chr1.3:43969335-43969354 | MS.gene81719:CDS | 35.0% | |
| AGTACAAAAAAGGGAGATGA+TGG | - | chr1.3:43969203-43969222 | MS.gene81719:CDS | 35.0% | |
| ATTGTGAAAAAGAAGCTTGC+TGG | - | chr1.3:43971102-43971121 | MS.gene81719:CDS | 35.0% | |
| CACTTATCAAAGTCAAGAAG+AGG | - | chr1.3:43971158-43971177 | MS.gene81719:CDS | 35.0% | |
| CCCTAGTATAAAAAGGAGAT+TGG | - | chr1.3:43969451-43969470 | MS.gene81719:CDS | 35.0% | |
| CTTACTATTGTCTCTTGAAC+TGG | + | chr1.3:43968887-43968906 | None:intergenic | 35.0% | |
| CTTGAACTGGATGCTAAAAT+AGG | + | chr1.3:43968874-43968893 | None:intergenic | 35.0% | |
| GAAACTACATTGACAAAGTG+AGG | - | chr1.3:43969576-43969595 | MS.gene81719:CDS | 35.0% | |
| GTCAATCACATCAAGATCAA+TGG | + | chr1.3:43971315-43971334 | None:intergenic | 35.0% | |
| GTTATATATTGCCAAGATGG+AGG | - | chr1.3:43970758-43970777 | MS.gene81719:CDS | 35.0% | |
| TAAGTGATTTCATGGAGAAG+TGG | - | chr1.3:43970137-43970156 | MS.gene81719:CDS | 35.0% | |
| TACTTACATTAATCCCAGCT+TGG | + | chr1.3:43969487-43969506 | None:intergenic | 35.0% | |
| TAGCATGAAAACACACTGTA+AGG | - | chr1.3:43969304-43969323 | MS.gene81719:CDS | 35.0% | |
| TGAAGAAGCAAATCCGTAAA+AGG | + | chr1.3:43970878-43970897 | None:intergenic | 35.0% | |
| TTAATATCCTTCCTCCATCT+TGG | + | chr1.3:43970772-43970791 | None:intergenic | 35.0% | |
| TTTCTTGGTTGTTCACTACT+TGG | - | chr1.3:43969903-43969922 | MS.gene81719:intron | 35.0% | |
| ! | CAAAGAGTTTCAAGTAGAAG+TGG | - | chr1.3:43970495-43970514 | MS.gene81719:CDS | 35.0% |
| ! | GAGAGTCTACTCAATTTTTC+TGG | + | chr1.3:43970061-43970080 | None:intergenic | 35.0% |
| ! | GTATGTGAGAGACACATTTT+GGG | - | chr1.3:43970243-43970262 | MS.gene81719:CDS | 35.0% |
| ! | TCATGCTTTCTTTGAGAGAA+TGG | - | chr1.3:43970534-43970553 | MS.gene81719:CDS | 35.0% |
| ! | TGTATGTGAGAGACACATTT+TGG | - | chr1.3:43970242-43970261 | MS.gene81719:CDS | 35.0% |
| ! | TGTGTTTTCATGCTAGGATT+TGG | + | chr1.3:43969299-43969318 | None:intergenic | 35.0% |
| ! | TTACAGTGTGTTTTCATGCT+AGG | + | chr1.3:43969305-43969324 | None:intergenic | 35.0% |
| ! | TTAGAAGCCTTCCTTTTTGA+AGG | + | chr1.3:43971072-43971091 | None:intergenic | 35.0% |
| !! | AGTTTTTCAGAGATCACTGA+AGG | - | chr1.3:43970976-43970995 | MS.gene81719:CDS | 35.0% |
| !!! | AGTGGTTTTGATCAATTAGC+CGG | - | chr1.3:43970814-43970833 | MS.gene81719:CDS | 35.0% |
| AATGTGTCTCTCACATACAC+AGG | + | chr1.3:43970241-43970260 | None:intergenic | 40.0% | |
| ACAAGCCATAATTACTGACC+AGG | - | chr1.3:43969952-43969971 | MS.gene81719:intron | 40.0% | |
| ACTACATTGACAAAGTGAGG+CGG | - | chr1.3:43969579-43969598 | MS.gene81719:CDS | 40.0% | |
| ACTCCAACAAAAGGAGCAAA+AGG | + | chr1.3:43969818-43969837 | None:intergenic | 40.0% | |
| ACTTGGTTAGAATGTATGCG+TGG | - | chr1.3:43969920-43969939 | MS.gene81719:intron | 40.0% | |
| AGCAATGAAGAATGCAGTTG+AGG | - | chr1.3:43969979-43969998 | MS.gene81719:intron | 40.0% | |
| AGTATCCTCCTTCGACAATA+GGG | + | chr1.3:43969876-43969895 | None:intergenic | 40.0% | |
| CTGTGAGCTTAAGAACACAA+AGG | + | chr1.3:43970714-43970733 | None:intergenic | 40.0% | |
| CTTGGTTAGAATGTATGCGT+GGG | - | chr1.3:43969921-43969940 | MS.gene81719:intron | 40.0% | |
| GAAGATGATGAACCTAAGGT+TGG | - | chr1.3:43969098-43969117 | MS.gene81719:intron | 40.0% | |
| GACGACAACGAGTTTGAAAA+CGG | + | chr1.3:43968784-43968803 | None:intergenic | 40.0% | |
| GTAGCAATGCTGATAAACAG+AGG | + | chr1.3:43968818-43968837 | None:intergenic | 40.0% | |
| GTTCAACAACACAAACTCAC+CGG | - | chr1.3:43968742-43968761 | MS.gene81719:intron | 40.0% | |
| TACTCACATAGCTTCTTGCA+CGG | + | chr1.3:43969256-43969275 | None:intergenic | 40.0% | |
| TAGTATCCTCCTTCGACAAT+AGG | + | chr1.3:43969877-43969896 | None:intergenic | 40.0% | |
| TATATTGCCAAGATGGAGGA+AGG | - | chr1.3:43970762-43970781 | MS.gene81719:CDS | 40.0% | |
| TCCATCCTGGTCAGTAATTA+TGG | + | chr1.3:43969960-43969979 | None:intergenic | 40.0% | |
| TCTATGGTTGTTGAAGCAAG+TGG | - | chr1.3:43969518-43969537 | MS.gene81719:CDS | 40.0% | |
| TGGTCAGTAATTATGGCTTG+TGG | + | chr1.3:43969953-43969972 | None:intergenic | 40.0% | |
| TTGTAGCGACTCGAAGTAAA+GGG | - | chr1.3:43971040-43971059 | MS.gene81719:CDS | 40.0% | |
| ! | AGGGCTGCTTATGAGTATTT+TGG | - | chr1.3:43969743-43969762 | MS.gene81719:intron | 40.0% |
| ! | ATGCCTTTTGCTCCTTTTGT+TGG | - | chr1.3:43969812-43969831 | MS.gene81719:intron | 40.0% |
| ! | CATCTTTTTCCCCGAATGTA+AGG | + | chr1.3:43969553-43969572 | None:intergenic | 40.0% |
| ! | TGCTTTCTTTGAGAGAATGG+AGG | - | chr1.3:43970537-43970556 | MS.gene81719:CDS | 40.0% |
| ! | TGTTAAGTAAGTGGTGTCGA+AGG | + | chr1.3:43969780-43969799 | None:intergenic | 40.0% |
| !! | AAGAAGCTTGCTGGAAAGAA+AGG | - | chr1.3:43971111-43971130 | MS.gene81719:CDS | 40.0% |
| !! | CATTCGTGTGTACTTTTTGC+AGG | - | chr1.3:43971616-43971635 | MS.gene81719:CDS | 40.0% |
| ACGCTGCAACTCTTCATTTC+CGG | + | chr1.3:43970836-43970855 | None:intergenic | 45.0% | |
| CATGGTCAGTCAGTTCTGTT+AGG | - | chr1.3:43969845-43969864 | MS.gene81719:intron | 45.0% | |
| CATTCTTCATTGCTCCATCC+TGG | + | chr1.3:43969973-43969992 | None:intergenic | 45.0% | |
| CTTGTAGCGACTCGAAGTAA+AGG | - | chr1.3:43971039-43971058 | MS.gene81719:CDS | 45.0% | |
| GACAACGAGTTTGAAAACGG+CGG | + | chr1.3:43968781-43968800 | None:intergenic | 45.0% | |
| GCCATAATTACTGACCAGGA+TGG | - | chr1.3:43969956-43969975 | MS.gene81719:intron | 45.0% | |
| GTTTGATGAGCGTCATCGTT+GGG | - | chr1.3:43970213-43970232 | MS.gene81719:CDS | 45.0% | |
| TGGAGGTTAATGACCAAGCT+GGG | - | chr1.3:43969471-43969490 | MS.gene81719:CDS | 45.0% | |
| TGTTTGATGAGCGTCATCGT+TGG | - | chr1.3:43970212-43970231 | MS.gene81719:CDS | 45.0% | |
| TTGAAAACGGCGGTGAATGT+TGG | + | chr1.3:43968771-43968790 | None:intergenic | 45.0% | |
| TTGGAGGTTAATGACCAAGC+TGG | - | chr1.3:43969470-43969489 | MS.gene81719:CDS | 45.0% | |
| ! | AAAGCCTGCGATGCCTTTTA+CGG | - | chr1.3:43970862-43970881 | MS.gene81719:CDS | 45.0% |
| !! | AAATCCGTAAAAGGCATCGC+AGG | + | chr1.3:43970869-43970888 | None:intergenic | 45.0% |
| !! | GAAGCCTTCCTTTTTGAAGG+AGG | + | chr1.3:43971069-43971088 | None:intergenic | 45.0% |
| !!! | CACGGCACACGTTTTGATTT+TGG | - | chr1.3:43968669-43968688 | MS.gene81719:CDS | 45.0% |
| !!! | AATTTATTTATTTTTATGTA+GGG | - | chr1.3:43971239-43971258 | MS.gene81719:CDS | 5.0% |
| !!! | TAATTTATTTATTTTTATGT+AGG | - | chr1.3:43971238-43971257 | MS.gene81719:CDS | 5.0% |
| GCGTCCTCCTTCAAAAAGGA+AGG | - | chr1.3:43971062-43971081 | MS.gene81719:CDS | 50.0% | |
| TATGCCACAAGCACCATCGA+TGG | + | chr1.3:43970024-43970043 | None:intergenic | 50.0% | |
| TTGGGCAGATGCGAGATGTA+GGG | - | chr1.3:43969724-43969743 | MS.gene81719:intron | 50.0% | |
| TTTGGGCAGATGCGAGATGT+AGG | - | chr1.3:43969723-43969742 | MS.gene81719:intron | 50.0% | |
| ! | GTGAGAGACACATTTTGGGC+TGG | - | chr1.3:43970247-43970266 | MS.gene81719:CDS | 50.0% |
| !! | AAGGGCGTCCTCCTTCAAAA+AGG | - | chr1.3:43971058-43971077 | MS.gene81719:CDS | 50.0% |
| AAAGTGAGGCGGCTTCGACT+TGG | - | chr1.3:43969590-43969609 | MS.gene81719:CDS | 55.0% | |
| AAGTGAGGCGGCTTCGACTT+GGG | - | chr1.3:43969591-43969610 | MS.gene81719:CDS | 55.0% | |
| ACCATCGATGGCGAGCTTTC+GGG | + | chr1.3:43970012-43970031 | None:intergenic | 55.0% | |
| AGGTTGCGCCCTATTGTCGA+AGG | - | chr1.3:43969865-43969884 | MS.gene81719:intron | 55.0% | |
| ATGGCGAGCTTTCGGGAAGA+CGG | + | chr1.3:43970005-43970024 | None:intergenic | 55.0% | |
| CACCATCGATGGCGAGCTTT+CGG | + | chr1.3:43970013-43970032 | None:intergenic | 55.0% | |
| TTGCGCCCTATTGTCGAAGG+AGG | - | chr1.3:43969868-43969887 | MS.gene81719:intron | 55.0% | |
| !! | CGGCGGTGAATGTTGGTAAC+CGG | + | chr1.3:43968764-43968783 | None:intergenic | 55.0% |
| CTCGCCATCGATGGTGCTTG+TGG | - | chr1.3:43970017-43970036 | MS.gene81719:intron | 60.0% | |
| TCCCGAAAGCTCGCCATCGA+TGG | - | chr1.3:43970008-43970027 | MS.gene81719:intron | 60.0% | |
| !! | AGGCGGCTTCGACTTGGGAC+AGG | - | chr1.3:43969596-43969615 | MS.gene81719:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 43968655 | 43971673 | 43968655 | ID=MS.gene81719 |
| chr1.3 | mRNA | 43968655 | 43971673 | 43968655 | ID=MS.gene81719.t1;Parent=MS.gene81719 |
| chr1.3 | exon | 43971427 | 43971673 | 43971427 | ID=MS.gene81719.t1.exon1;Parent=MS.gene81719.t1 |
| chr1.3 | CDS | 43971427 | 43971673 | 43971427 | ID=cds.MS.gene81719.t1;Parent=MS.gene81719.t1 |
| chr1.3 | exon | 43970480 | 43971391 | 43970480 | ID=MS.gene81719.t1.exon2;Parent=MS.gene81719.t1 |
| chr1.3 | CDS | 43970480 | 43971391 | 43970480 | ID=cds.MS.gene81719.t1;Parent=MS.gene81719.t1 |
| chr1.3 | exon | 43970033 | 43970398 | 43970033 | ID=MS.gene81719.t1.exon3;Parent=MS.gene81719.t1 |
| chr1.3 | CDS | 43970033 | 43970398 | 43970033 | ID=cds.MS.gene81719.t1;Parent=MS.gene81719.t1 |
| chr1.3 | exon | 43969149 | 43969741 | 43969149 | ID=MS.gene81719.t1.exon4;Parent=MS.gene81719.t1 |
| chr1.3 | CDS | 43969149 | 43969741 | 43969149 | ID=cds.MS.gene81719.t1;Parent=MS.gene81719.t1 |
| chr1.3 | exon | 43968919 | 43969068 | 43968919 | ID=MS.gene81719.t1.exon5;Parent=MS.gene81719.t1 |
| chr1.3 | CDS | 43968919 | 43969068 | 43968919 | ID=cds.MS.gene81719.t1;Parent=MS.gene81719.t1 |
| chr1.3 | exon | 43968775 | 43968831 | 43968775 | ID=MS.gene81719.t1.exon6;Parent=MS.gene81719.t1 |
| chr1.3 | CDS | 43968775 | 43968831 | 43968775 | ID=cds.MS.gene81719.t1;Parent=MS.gene81719.t1 |
| chr1.3 | exon | 43968655 | 43968690 | 43968655 | ID=MS.gene81719.t1.exon7;Parent=MS.gene81719.t1 |
| chr1.3 | CDS | 43968655 | 43968690 | 43968655 | ID=cds.MS.gene81719.t1;Parent=MS.gene81719.t1 |
| Gene Sequence |
| Protein sequence |
