AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81888

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81888.t1 MTR_7g005280 83.465 127 19 2 21 145 59 185 5.77e-72 218
MS.gene81888.t1 MTR_7g070140 84.524 84 13 0 29 112 19 102 3.48e-48 153
MS.gene81888.t1 MTR_7g070150 63.208 106 18 1 65 170 1 85 8.58e-40 130
MS.gene81888.t1 MTR_1g008740 53.390 118 44 2 29 144 83 191 7.27e-33 120
MS.gene81888.t1 MTR_1g008740 53.390 118 44 2 29 144 69 177 8.09e-33 120
MS.gene81888.t1 MTR_7g097090 58.242 91 37 1 29 119 65 154 2.43e-32 117
MS.gene81888.t1 MTR_4g035590 48.000 125 53 4 29 144 66 187 3.66e-32 118
MS.gene81888.t1 MTR_1g069805 58.065 93 38 1 29 121 65 156 3.96e-32 116
MS.gene81888.t1 MTR_3g109340 48.387 124 57 2 29 145 77 200 1.65e-31 117
MS.gene81888.t1 MTR_3g109340 48.000 125 57 2 29 145 77 201 2.42e-31 116
MS.gene81888.t1 MTR_5g021710 49.074 108 52 2 29 135 66 171 2.54e-31 116
MS.gene81888.t1 MTR_4g081870 52.679 112 44 3 21 125 56 165 3.22e-31 114
MS.gene81888.t1 MTR_3g064580 61.224 98 32 4 28 121 62 157 3.99e-31 118
MS.gene81888.t1 MTR_2157s0010 48.837 129 52 4 29 143 63 191 6.71e-31 113
MS.gene81888.t1 MTR_2g064090 50.862 116 49 4 28 137 62 175 7.83e-31 114
MS.gene81888.t1 MTR_2g080010 47.368 133 48 4 29 139 70 202 1.65e-30 114
MS.gene81888.t1 MTR_4g089135 46.565 131 44 2 29 133 70 200 1.77e-30 114
MS.gene81888.t1 MTR_4g036030 54.737 95 40 2 29 122 65 157 2.18e-30 113
MS.gene81888.t1 MTR_2g062730 50.000 104 50 2 29 131 68 170 8.49e-30 112
MS.gene81888.t1 MTR_7g085220 47.581 124 47 4 29 135 63 185 9.41e-30 112
MS.gene81888.t1 MTR_4g108760 44.079 152 62 6 29 161 72 219 1.14e-29 112
MS.gene81888.t1 MTR_8g076110 52.632 95 42 2 29 122 64 156 1.52e-29 110
MS.gene81888.t1 MTR_2g078700 51.961 102 44 1 29 125 78 179 1.52e-29 112
MS.gene81888.t1 MTR_6g032770 52.041 98 42 1 29 121 73 170 1.82e-29 111
MS.gene81888.t1 MTR_5g041940 50.459 109 45 2 21 122 50 156 2.69e-29 108
MS.gene81888.t1 MTR_1g096430 57.447 94 37 3 29 121 65 156 4.09e-29 110
MS.gene81888.t1 MTR_5g012080 50.000 98 46 2 27 122 63 159 7.41e-29 109
MS.gene81888.t1 MTR_2g064470 42.361 144 68 5 29 167 64 197 9.70e-29 108
MS.gene81888.t1 MTR_8g099750 48.148 108 46 2 29 127 67 173 1.21e-28 106
MS.gene81888.t1 MTR_5g076850 45.736 129 54 5 28 153 62 177 1.45e-28 111
MS.gene81888.t1 MTR_8g024480 50.000 106 39 2 29 122 73 176 1.77e-28 109
MS.gene81888.t1 MTR_4g101680 50.000 104 49 2 29 131 65 166 1.89e-28 108
MS.gene81888.t1 MTR_3g070030 53.398 103 40 3 31 127 76 176 3.06e-28 108
MS.gene81888.t1 MTR_7g100990 52.577 97 39 2 29 118 66 162 3.37e-28 107
MS.gene81888.t1 MTR_3g116070 57.317 82 35 0 29 110 79 160 3.44e-28 107
MS.gene81888.t1 MTR_6g084430 44.275 131 61 4 29 151 60 186 4.44e-28 107
MS.gene81888.t1 MTR_6g012670 39.264 163 82 5 29 177 75 234 5.13e-28 107
MS.gene81888.t1 MTR_2g079990 53.922 102 42 2 29 127 71 170 6.58e-28 107
MS.gene81888.t1 MTR_6g477900 49.057 106 48 3 29 131 63 165 6.92e-28 104
MS.gene81888.t1 MTR_8g094580 48.780 123 48 4 29 144 8 122 7.81e-28 104
MS.gene81888.t1 MTR_1g090723 48.598 107 50 2 28 131 65 169 1.31e-27 108
MS.gene81888.t1 MTR_3g088110 55.000 100 36 3 29 122 62 158 1.57e-27 105
MS.gene81888.t1 MTR_3g435150 51.923 104 43 3 29 127 71 172 1.73e-27 105
MS.gene81888.t1 MTR_3g098810 51.376 109 42 2 31 128 69 177 1.86e-27 103
MS.gene81888.t1 MTR_2g093810 50.515 97 41 1 29 118 69 165 2.24e-27 105
MS.gene81888.t1 MTR_8g094580 48.780 123 48 4 29 144 62 176 2.58e-27 104
MS.gene81888.t1 MTR_1g090723 48.113 106 51 2 28 131 65 168 2.86e-27 107
MS.gene81888.t1 MTR_1g090723 48.113 106 51 2 28 131 65 168 3.51e-27 107
MS.gene81888.t1 MTR_3g093050 40.541 148 70 4 29 173 79 211 5.77e-27 106
MS.gene81888.t1 MTR_7g011130 47.009 117 42 3 29 127 74 188 9.87e-27 103
MS.gene81888.t1 MTR_3g093050 44.275 131 55 4 29 156 79 194 1.15e-26 105
MS.gene81888.t1 MTR_3g096920 53.000 100 38 2 29 122 62 158 1.37e-26 102
MS.gene81888.t1 MTR_8g059170 55.102 98 37 4 29 121 69 164 4.59e-26 102
MS.gene81888.t1 MTR_7g011120 48.649 111 43 3 29 127 63 171 6.14e-26 101
MS.gene81888.t1 MTR_7g085260 51.000 100 42 3 29 121 72 171 1.20e-25 101
MS.gene81888.t1 MTR_5g069030 52.577 97 41 2 29 122 82 176 1.21e-25 103
MS.gene81888.t1 MTR_3g093040 48.958 96 44 2 29 121 165 258 1.40e-25 100
MS.gene81888.t1 MTR_5g014300 42.149 121 65 1 28 143 62 182 1.46e-25 100
MS.gene81888.t1 MTR_0036s0150 49.524 105 49 2 28 130 62 164 1.76e-25 102
MS.gene81888.t1 MTR_3g070040 44.444 117 50 3 21 127 52 163 4.51e-25 99.4
MS.gene81888.t1 MTR_2g079990 60.759 79 29 1 29 107 71 147 9.76e-25 99.0
MS.gene81888.t1 MTR_5g040420 43.636 110 51 1 29 127 69 178 9.96e-25 99.4
MS.gene81888.t1 MTR_8g063550 46.154 104 51 2 28 128 62 163 1.15e-24 98.2
MS.gene81888.t1 MTR_8g063550 46.154 104 51 2 28 128 62 163 1.78e-24 99.0
MS.gene81888.t1 MTR_8g063550 46.154 104 51 2 28 128 62 163 2.08e-24 98.6
MS.gene81888.t1 MTR_8g467490 42.342 111 52 1 29 127 69 179 2.58e-24 98.2
MS.gene81888.t1 MTR_3g096920 61.333 75 26 1 29 103 62 133 1.39e-23 95.1
MS.gene81888.t1 MTR_3g096140 47.619 105 48 3 28 128 63 164 2.15e-23 94.0
MS.gene81888.t1 MTR_4g075980 39.655 116 59 3 29 135 70 183 2.73e-23 94.0
MS.gene81888.t1 MTR_4g098630 55.000 80 35 1 28 106 62 141 3.34e-23 94.0
MS.gene81888.t1 MTR_1g097300 44.860 107 52 3 29 131 76 179 5.66e-23 95.5
MS.gene81888.t1 MTR_3g096140 47.619 105 48 3 28 128 42 143 5.74e-23 93.6
MS.gene81888.t1 MTR_3g096140 47.619 105 48 3 28 128 63 164 7.76e-23 93.6
MS.gene81888.t1 MTR_8g093580 44.231 104 53 2 28 128 62 163 1.35e-22 94.0
MS.gene81888.t1 MTR_3g098810 55.422 83 35 1 31 111 69 151 1.57e-22 89.4
MS.gene81888.t1 MTR_5g090970 46.154 104 43 3 29 119 73 176 1.63e-22 92.0
MS.gene81888.t1 MTR_5g090970 46.154 104 43 3 29 119 72 175 1.68e-22 92.0
MS.gene81888.t1 MTR_2g068880 44.444 126 50 5 29 138 78 199 2.80e-22 91.7
MS.gene81888.t1 MTR_6g011860 43.810 105 46 3 29 121 70 173 2.35e-21 90.1
MS.gene81888.t1 MTR_4g134460 46.535 101 50 3 29 128 109 206 3.90e-21 89.7
MS.gene81888.t1 MTR_2g068920 43.548 124 53 4 29 136 77 199 5.54e-21 87.8
MS.gene81888.t1 MTR_1g090720 46.364 110 46 3 29 128 99 205 1.55e-20 88.2
MS.gene81888.t1 MTR_2g086880 46.667 90 42 2 29 118 74 157 4.34e-20 87.0
MS.gene81888.t1 MTR_2g086880 46.667 90 42 2 29 118 74 157 6.99e-20 86.3
MS.gene81888.t1 MTR_8g023840 46.667 90 45 2 29 118 69 155 1.06e-19 85.5
MS.gene81888.t1 MTR_2g086690 40.000 110 54 4 17 120 58 161 3.30e-17 77.0
MS.gene81888.t1 MTR_4g052620 40.741 108 52 4 19 120 60 161 7.99e-16 73.2
MS.gene81888.t1 MTR_7g105170 35.922 103 57 3 29 123 65 166 1.36e-15 72.8
MS.gene81888.t1 MTR_4g094302 37.000 100 46 2 29 119 66 157 2.10e-15 70.9
MS.gene81888.t1 MTR_8g023900 37.143 105 63 2 29 133 251 352 3.91e-15 72.8
MS.gene81888.t1 MTR_8g023900 33.065 124 69 2 10 133 64 173 9.46e-14 68.6
MS.gene81888.t1 MTR_4g094302 50.000 56 28 0 46 101 75 130 9.85e-15 68.6
MS.gene81888.t1 MTR_8g023860 36.667 90 54 2 29 118 70 156 6.07e-14 69.3
MS.gene81888.t1 MTR_8g023930 36.449 107 61 3 29 133 82 183 6.56e-13 66.2
MS.gene81888.t1 MTR_8g023880 39.286 112 48 5 50 156 100 196 8.95e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81888.t1 AT5G13180 70.588 102 28 1 29 128 66 167 1.44e-47 155
MS.gene81888.t1 AT2G33480 70.408 98 24 2 29 123 10 105 2.81e-45 148
MS.gene81888.t1 AT2G33480 69.697 99 27 2 29 126 67 163 1.26e-44 148
MS.gene81888.t1 AT2G33480 68.317 101 27 2 29 126 67 165 2.21e-44 148
MS.gene81888.t1 AT2G24430 58.416 101 40 1 29 127 71 171 2.98e-34 123
MS.gene81888.t1 AT2G24430 58.416 101 40 1 29 127 71 171 2.98e-34 123
MS.gene81888.t1 AT1G33280 56.383 94 39 1 29 122 66 157 1.51e-33 121
MS.gene81888.t1 AT4G10350 55.670 97 38 2 29 122 20 114 4.04e-33 119
MS.gene81888.t1 AT4G10350 55.670 97 38 2 29 122 67 161 9.43e-33 119
MS.gene81888.t1 AT5G61430 55.769 104 39 3 29 127 8 109 4.10e-32 116
MS.gene81888.t1 AT5G39610 40.789 152 77 4 29 169 75 224 1.01e-31 115
MS.gene81888.t1 AT5G07680 55.769 104 39 3 29 127 58 159 1.06e-31 116
MS.gene81888.t1 AT5G07680 55.769 104 39 3 29 127 72 173 1.45e-31 116
MS.gene81888.t1 AT5G61430 55.769 104 39 3 29 127 71 172 1.51e-31 116
MS.gene81888.t1 AT4G28530 56.842 95 40 1 29 123 81 174 1.79e-31 116
MS.gene81888.t1 AT1G77450 50.847 118 49 3 29 140 65 179 2.11e-31 114
MS.gene81888.t1 AT5G62380 50.847 118 54 3 29 144 65 180 4.25e-31 115
MS.gene81888.t1 AT5G62380 50.847 118 54 3 29 144 65 180 4.25e-31 115
MS.gene81888.t1 AT2G18060 55.769 104 42 4 29 130 67 168 4.87e-31 115
MS.gene81888.t1 AT2G18060 55.769 104 42 4 29 130 67 168 4.87e-31 115
MS.gene81888.t1 AT4G36160 53.271 107 45 3 27 130 70 174 5.88e-31 115
MS.gene81888.t1 AT4G36160 53.271 107 45 3 27 130 66 170 5.96e-31 115
MS.gene81888.t1 AT4G36160 53.271 107 45 3 27 130 66 170 5.96e-31 115
MS.gene81888.t1 AT5G66300 56.701 97 36 3 29 122 70 163 7.33e-31 114
MS.gene81888.t1 AT1G76420 54.839 93 40 1 29 119 77 169 1.70e-30 114
MS.gene81888.t1 AT3G18400 55.446 101 41 3 29 127 60 158 2.02e-30 113
MS.gene81888.t1 AT1G69490 55.660 106 37 3 29 127 64 166 2.19e-30 112
MS.gene81888.t1 AT1G62700 53.061 98 43 2 29 125 65 160 2.85e-30 114
MS.gene81888.t1 AT1G62700 53.061 98 43 2 29 125 65 160 2.85e-30 114
MS.gene81888.t1 AT1G65910 44.444 144 67 5 28 168 62 195 3.09e-30 116
MS.gene81888.t1 AT1G12260 51.000 100 46 2 29 127 65 162 3.12e-30 113
MS.gene81888.t1 AT3G15170 40.881 159 76 5 29 173 75 229 5.55e-30 112
MS.gene81888.t1 AT1G12260 51.000 100 46 2 29 127 65 162 8.21e-30 113
MS.gene81888.t1 AT4G35580 54.630 108 41 3 29 130 66 171 1.32e-29 114
MS.gene81888.t1 AT4G35580 54.630 108 41 3 29 130 66 171 1.47e-29 114
MS.gene81888.t1 AT4G35580 54.630 108 41 3 29 130 66 171 1.66e-29 113
MS.gene81888.t1 AT3G15510 51.402 107 38 2 29 121 72 178 1.67e-29 111
MS.gene81888.t1 AT3G12977 52.941 102 42 3 29 126 20 119 3.16e-29 108
MS.gene81888.t1 AT4G27410 55.556 99 39 2 29 124 69 165 4.16e-29 109
MS.gene81888.t1 AT1G56010 38.065 155 76 3 29 177 8 148 4.40e-29 108
MS.gene81888.t1 AT5G18270 55.102 98 38 2 29 121 76 172 5.05e-29 110
MS.gene81888.t1 AT5G18270 55.102 98 38 2 29 121 76 172 5.05e-29 110
MS.gene81888.t1 AT4G27410 55.556 99 39 2 29 124 86 182 7.22e-29 108
MS.gene81888.t1 AT1G79580 53.684 95 41 2 29 122 75 167 7.74e-29 110
MS.gene81888.t1 AT1G79580 53.684 95 41 2 29 122 75 167 7.74e-29 110
MS.gene81888.t1 AT1G79580 53.684 95 41 2 29 122 75 167 7.74e-29 110
MS.gene81888.t1 AT1G79580 53.684 95 41 2 29 122 75 167 7.74e-29 110
MS.gene81888.t1 AT1G79580 53.684 95 41 2 29 122 75 167 7.74e-29 110
MS.gene81888.t1 AT1G61110 47.287 129 46 4 29 136 71 198 8.09e-29 109
MS.gene81888.t1 AT1G54330 55.319 94 40 1 28 121 62 153 9.68e-29 108
MS.gene81888.t1 AT5G53950 53.061 98 41 1 29 121 72 169 1.09e-28 109
MS.gene81888.t1 AT1G71930 53.191 94 41 2 29 121 67 158 1.21e-28 108
MS.gene81888.t1 AT1G71930 53.191 94 41 2 29 121 67 158 1.21e-28 108
MS.gene81888.t1 AT1G56010 38.065 155 76 3 29 177 75 215 1.46e-28 108
MS.gene81888.t1 AT3G12977 52.941 102 42 3 29 126 73 172 1.81e-28 107
MS.gene81888.t1 AT3G10500 47.826 115 55 2 20 131 57 169 2.27e-28 110
MS.gene81888.t1 AT5G04410 47.826 115 55 2 20 131 57 169 3.49e-28 110
MS.gene81888.t1 AT5G17260 47.368 114 54 2 29 138 63 174 4.10e-28 109
MS.gene81888.t1 AT2G46770 40.136 147 63 4 29 159 74 211 4.28e-28 107
MS.gene81888.t1 AT3G04060 56.122 98 37 3 29 121 75 171 4.46e-28 107
MS.gene81888.t1 AT5G63790 40.373 161 83 4 29 181 105 260 4.61e-28 107
MS.gene81888.t1 AT3G04070 53.774 106 36 3 29 121 65 170 5.17e-28 107
MS.gene81888.t1 AT5G63790 40.373 161 83 4 29 181 115 270 5.81e-28 107
MS.gene81888.t1 AT5G08790 53.922 102 36 3 29 122 62 160 1.19e-27 105
MS.gene81888.t1 AT3G17730 51.042 96 42 3 29 121 63 156 1.76e-27 103
MS.gene81888.t1 AT3G03200 49.533 107 48 2 29 131 63 167 1.79e-27 107
MS.gene81888.t1 AT1G33060 54.167 96 39 2 29 121 81 174 2.63e-27 107
MS.gene81888.t1 AT5G46590 51.020 98 43 2 28 121 62 158 2.73e-27 104
MS.gene81888.t1 AT1G33060 54.167 96 39 2 29 121 81 174 2.82e-27 107
MS.gene81888.t1 AT1G52890 51.961 102 44 2 29 127 69 168 6.52e-27 103
MS.gene81888.t1 AT3G15500 51.961 102 44 2 29 127 69 168 9.49e-27 103
MS.gene81888.t1 AT1G01720 52.778 108 39 4 29 129 62 164 9.64e-27 103
MS.gene81888.t1 AT1G32770 46.729 107 42 3 29 122 74 178 1.92e-26 103
MS.gene81888.t1 AT3G04070 61.728 81 28 1 29 106 65 145 5.12e-26 102
MS.gene81888.t1 AT3G29035 47.826 115 51 3 29 138 79 189 6.50e-26 101
MS.gene81888.t1 AT3G61910 46.789 109 40 3 29 121 69 175 6.85e-26 101
MS.gene81888.t1 AT3G10480 50.495 101 44 2 29 125 84 182 8.02e-26 102
MS.gene81888.t1 AT3G10480 50.495 101 44 2 29 125 117 215 9.89e-26 103
MS.gene81888.t1 AT3G10490 49.505 101 45 2 29 125 84 182 3.78e-25 97.8
MS.gene81888.t1 AT5G46590 50.588 85 41 1 28 112 62 145 6.73e-25 97.8
MS.gene81888.t1 AT3G10480 50.000 100 45 2 29 125 84 181 8.33e-25 100
MS.gene81888.t1 AT1G52880 45.045 111 48 2 29 126 72 182 1.14e-24 98.2
MS.gene81888.t1 AT2G17040 50.000 94 44 2 29 121 61 152 1.15e-24 97.4
MS.gene81888.t1 AT5G24590 44.094 127 56 4 26 142 67 188 1.48e-24 99.4
MS.gene81888.t1 AT3G10490 49.505 101 45 2 29 125 84 182 1.54e-24 99.4
MS.gene81888.t1 AT4G17980 55.405 74 33 0 28 101 62 135 6.48e-24 95.1
MS.gene81888.t1 AT1G34190 47.222 108 48 4 29 131 73 176 7.27e-24 97.8
MS.gene81888.t1 AT3G49530 47.917 96 46 2 29 121 70 164 7.77e-24 97.4
MS.gene81888.t1 AT3G49530 47.917 96 46 2 29 121 70 164 9.85e-24 96.7
MS.gene81888.t1 AT4G17980 55.405 74 33 0 28 101 62 135 1.30e-23 94.7
MS.gene81888.t1 AT2G02450 50.515 97 45 3 29 124 106 200 1.40e-22 93.2
MS.gene81888.t1 AT1G34180 44.860 107 52 3 29 131 85 188 1.65e-22 94.0
MS.gene81888.t1 AT5G39820 36.691 139 64 2 29 143 75 213 1.88e-22 92.4
MS.gene81888.t1 AT2G02450 50.515 97 45 3 29 124 106 200 2.27e-22 93.2
MS.gene81888.t1 AT1G34180 44.860 107 52 3 29 131 73 176 2.33e-22 93.6
MS.gene81888.t1 AT5G64060 38.462 130 63 3 28 154 62 177 2.70e-22 92.0
MS.gene81888.t1 AT3G12910 43.860 114 48 3 22 119 70 183 3.19e-22 91.3
MS.gene81888.t1 AT1G32510 42.400 125 63 2 28 143 62 186 3.90e-22 90.9
MS.gene81888.t1 AT1G34180 45.714 105 50 3 31 131 75 176 6.32e-22 92.0
MS.gene81888.t1 AT1G34180 45.714 105 50 3 31 131 87 188 7.29e-22 92.0
MS.gene81888.t1 AT5G09330 45.192 104 52 2 28 128 62 163 1.59e-21 90.9
MS.gene81888.t1 AT5G09330 45.192 104 52 2 28 128 62 163 1.59e-21 90.9
MS.gene81888.t1 AT5G09330 45.192 104 52 2 28 128 62 163 1.59e-21 90.9
MS.gene81888.t1 AT5G09330 45.192 104 52 2 28 128 62 163 1.59e-21 90.9
MS.gene81888.t1 AT5G09330 45.192 104 52 2 28 128 62 163 1.59e-21 90.9
MS.gene81888.t1 AT5G22290 40.625 128 67 4 29 156 77 195 1.90e-21 89.7
MS.gene81888.t1 AT1G26870 41.509 106 48 2 29 121 71 175 5.22e-21 89.4
MS.gene81888.t1 AT2G18060 54.321 81 33 4 52 130 2 80 6.12e-21 87.4
MS.gene81888.t1 AT2G43000 47.368 95 44 3 29 119 73 165 9.28e-21 87.0
MS.gene81888.t1 AT2G27300 37.600 125 70 3 29 151 70 188 4.90e-19 83.2
MS.gene81888.t1 AT4G01540 48.780 82 41 1 22 102 56 137 7.30e-19 83.6
MS.gene81888.t1 AT4G01540 48.780 82 41 1 22 102 56 137 7.31e-19 83.2
MS.gene81888.t1 AT4G01540 48.780 82 41 1 22 102 56 137 7.62e-19 83.2
MS.gene81888.t1 AT3G10490 48.810 84 37 2 47 126 2 83 8.75e-19 82.4
MS.gene81888.t1 AT3G10490 48.810 84 37 2 47 126 2 83 8.75e-19 82.4
MS.gene81888.t1 AT4G01540 48.780 82 41 1 22 102 56 137 1.14e-18 82.4
MS.gene81888.t1 AT4G01520 47.561 82 42 1 22 102 56 137 1.33e-18 81.6
MS.gene81888.t1 AT3G44290 43.333 90 45 2 29 118 70 153 1.68e-18 80.1
MS.gene81888.t1 AT3G44290 43.333 90 45 2 29 118 70 153 4.45e-18 80.5
MS.gene81888.t1 AT2G43000 46.591 88 41 3 36 119 2 87 6.95e-18 77.8
MS.gene81888.t1 AT1G32870 42.593 108 53 4 29 131 103 206 1.40e-17 79.7
MS.gene81888.t1 AT1G32870 42.593 108 53 4 29 131 67 170 1.44e-17 79.7
MS.gene81888.t1 AT1G32870 42.593 108 53 4 29 131 67 170 1.54e-17 79.7
MS.gene81888.t1 AT4G01550 39.583 96 55 2 31 125 64 157 2.17e-16 76.3
MS.gene81888.t1 AT3G44350 39.450 109 56 3 17 121 58 160 4.58e-16 73.6
MS.gene81888.t1 AT5G22380 36.937 111 59 3 15 120 57 161 2.16e-15 71.6
MS.gene81888.t1 AT3G44350 42.222 90 46 2 17 106 58 141 5.00e-15 69.3
MS.gene81888.t1 AT5G04395 45.946 74 39 1 29 101 96 169 1.70e-14 68.6
MS.gene81888.t1 AT3G04420 40.000 90 50 2 32 121 65 150 1.78e-14 70.5
MS.gene81888.t1 AT3G04420 40.000 90 50 2 32 121 65 150 2.10e-14 69.7
MS.gene81888.t1 AT1G02230 42.391 92 48 3 31 121 64 151 3.04e-14 70.1
MS.gene81888.t1 AT5G22290 39.423 104 54 4 53 156 2 96 1.81e-13 66.6
MS.gene81888.t1 AT1G02250 41.304 92 49 3 31 121 64 151 7.39e-13 65.9
MS.gene81888.t1 AT4G28530 50.877 57 28 0 29 85 81 137 7.42e-12 62.8
MS.gene81888.t1 AT1G02220 35.714 98 54 4 32 129 65 153 3.40e-11 61.2

Find 39 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTAGATCGGTTCCCATT+TGG 0.335676 6.4:-55013744 None:intergenic
GAGCTACAAACTCTGGTTAC+TGG 0.345872 6.4:+55013766 MS.gene81888:CDS
TTTGCAGTGATGATGCAATA+AGG 0.347211 6.4:+55017213 MS.gene81888:CDS
TCGGTTCCCATTTGGATACT+TGG 0.352516 6.4:-55013736 None:intergenic
CCAAGCAGTGGCAGCAACTT+TGG 0.381811 6.4:+55014120 MS.gene81888:CDS
TTACTGGAAGGCAACTGGTT+TGG 0.413426 6.4:+55013782 MS.gene81888:CDS
TCAAAGACTCGTGAAGTTGT+TGG 0.433785 6.4:+55013822 MS.gene81888:CDS
CCAAAGTTGCTGCCACTGCT+TGG 0.433802 6.4:-55014120 None:intergenic
TCTGGTTACTGGAAGGCAAC+TGG 0.438388 6.4:+55013777 MS.gene81888:CDS
AGAGAATCCAAGTATCCAAA+TGG 0.440359 6.4:+55013729 MS.gene81888:CDS
CTCAGCTTCAAGTGCAAAAG+TGG 0.443189 6.4:+55014161 MS.gene81888:CDS
TATTGCATCATCACTGCAAA+TGG 0.449708 6.4:-55017210 None:intergenic
TGCAGAATGAAAATTGGGTT+CGG 0.450439 6.4:+55014031 MS.gene81888:intron
AGAGATGAAACTGCATGAAA+AGG 0.451803 6.4:+55017181 MS.gene81888:CDS
GCAGTGGCAGCAACTTTGGT+GGG 0.465537 6.4:+55014124 MS.gene81888:CDS
TTGCAGTGATGATGCAATAA+GGG 0.478423 6.4:+55017214 MS.gene81888:CDS
CCGCGAAGCTGCTACTAGAT+TGG 0.479870 6.4:+55013418 MS.gene81888:CDS
TTCCTCTCACTCCAACCCCT+TGG 0.484311 6.4:+55013929 MS.gene81888:CDS
CCAATCTAGTAGCAGCTTCG+CGG 0.495028 6.4:-55013418 None:intergenic
GGTTGGAGTGAGAGGAAGTG+AGG 0.514880 6.4:-55013923 None:intergenic
AATAGAGAAGAGACAATGAA+AGG 0.527876 6.4:+55014090 MS.gene81888:CDS
AGTTTGTAGCTCTGTTAGAT+CGG 0.532621 6.4:-55013755 None:intergenic
GAGAATCCAAGTATCCAAAT+GGG 0.538634 6.4:+55013730 MS.gene81888:CDS
TTCGTAGTGATGATGCAATA+CGG 0.541142 6.4:+55013384 MS.gene81888:CDS
AGCAGTGGCAGCAACTTTGG+TGG 0.543501 6.4:+55014123 MS.gene81888:CDS
GACCAAGGGGTTGGAGTGAG+AGG 0.548262 6.4:-55013931 None:intergenic
CTCATGGTTCAAGAACTGAT+TGG 0.548704 6.4:+55013883 MS.gene81888:CDS
AGAAAGACTGACCAAGGGGT+TGG 0.548887 6.4:-55013940 None:intergenic
TCTAACAGAGCTACAAACTC+TGG 0.560803 6.4:+55013759 MS.gene81888:CDS
TATTGCATCATCACTACGAA+TGG 0.584473 6.4:-55013381 None:intergenic
TACAGAGGGAAACCACCTCA+TGG 0.609880 6.4:+55013867 MS.gene81888:CDS
CGCATATTTCTGAAGAGGAG+AGG 0.611502 6.4:+55014057 MS.gene81888:CDS
TCAGTTCTTGAACCATGAGG+TGG 0.615010 6.4:-55013879 None:intergenic
AAAGGAGTGAAGCCAAGCAG+TGG 0.615889 6.4:+55014108 MS.gene81888:CDS
GGTGTCGCATATTTCTGAAG+AGG 0.616757 6.4:+55014052 MS.gene81888:CDS
TACAAACTCTGGTTACTGGA+AGG 0.635081 6.4:+55013770 MS.gene81888:CDS
ATATTTCTGAAGAGGAGAGG+TGG 0.674268 6.4:+55014060 MS.gene81888:CDS
CAGTGGCAGCAACTTTGGTG+GGG 0.689986 6.4:+55014125 MS.gene81888:CDS
CAATCAGTTCTTGAACCATG+AGG 0.707588 6.4:-55013882 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACTAAAAATACAAAATA+TGG + chr6.4:55015708-55015727 MS.gene81888:intron 10.0%
!! CAAATAAACAATAAAATAAT+AGG + chr6.4:55014883-55014902 MS.gene81888:intron 10.0%
!! TAATATTAATATGAATGAAT+TGG + chr6.4:55014004-55014023 MS.gene81888:intron 10.0%
!! TAATTTATGTTATAAAACTA+AGG - chr6.4:55014458-55014477 None:intergenic 10.0%
!! TATAAATTTAAACAATTACA+TGG + chr6.4:55015485-55015504 MS.gene81888:intron 10.0%
!!! AAATTTTAAAATTCAAGATA+CGG + chr6.4:55015612-55015631 MS.gene81888:intron 10.0%
!!! TATTTTTAGTTTTTTTTTGA+AGG - chr6.4:55015701-55015720 None:intergenic 10.0%
!!! TCTTGAATTTTAAAATTTTT+CGG - chr6.4:55015610-55015629 None:intergenic 10.0%
!! ATTAATATAGATGAATTCAA+GGG - chr6.4:55015286-55015305 None:intergenic 15.0%
!! ATTGTTATGAATATTATAAG+TGG + chr6.4:55014210-55014229 MS.gene81888:intron 15.0%
!! GATGTTAAAAAAGTTATTAA+GGG + chr6.4:55016235-55016254 MS.gene81888:intron 15.0%
!! TGATGTTAAAAAAGTTATTA+AGG + chr6.4:55016234-55016253 MS.gene81888:intron 15.0%
!! TTTGTACTTTCATATATTAT+AGG - chr6.4:55014487-55014506 None:intergenic 15.0%
!!! AGTATTAAAATTTACTTTTG+CGG + chr6.4:55015086-55015105 MS.gene81888:intron 15.0%
!!! GGACAATTTAATTTTTTTAT+TGG + chr6.4:55016256-55016275 MS.gene81888:intron 15.0%
!!! TACAAAGTTTATTATCTTTT+TGG - chr6.4:55016384-55016403 None:intergenic 15.0%
!! CAAAAACATTAGACAAATTA+TGG - chr6.4:55017100-55017119 None:intergenic 20.0%
!! CAAATTAAACAGCATATATT+TGG - chr6.4:55014804-55014823 None:intergenic 20.0%
!! CCAAATATAATATAAACATC+AGG + chr6.4:55015995-55016014 MS.gene81888:intron 20.0%
!! CCTGATGTTTATATTATATT+TGG - chr6.4:55015998-55016017 None:intergenic 20.0%
!! GAAGAATAGTTTGATATATA+AGG - chr6.4:55016886-55016905 None:intergenic 20.0%
!! GATTAATATAGATGAATTCA+AGG - chr6.4:55015287-55015306 None:intergenic 20.0%
!! TAAAACTCAAGCAAAAAAAT+TGG + chr6.4:55015733-55015752 MS.gene81888:intron 20.0%
!! TGCAATAATATATTGTTTGT+TGG - chr6.4:55015038-55015057 None:intergenic 20.0%
!! TGTTATAAAACTAAGGAAAT+AGG - chr6.4:55014451-55014470 None:intergenic 20.0%
!! TTAATTACAAATTCAGACAA+AGG - chr6.4:55013971-55013990 None:intergenic 20.0%
!!! AAAGTTTATTATCTTTTTGG+TGG - chr6.4:55016381-55016400 None:intergenic 20.0%
!!! AACAAAAAACCGAATATTTT+TGG - chr6.4:55015184-55015203 None:intergenic 20.0%
!!! ACATGATTTTTATTTTGGAT+CGG - chr6.4:55014733-55014752 None:intergenic 20.0%
!!! CAAATATATGCTGTTTAATT+TGG + chr6.4:55014802-55014821 MS.gene81888:intron 20.0%
!!! TTCAAGAAGAGTTTTAAATT+TGG - chr6.4:55016693-55016712 None:intergenic 20.0%
! AAAAATTACATGTTGCACTT+TGG - chr6.4:55014844-55014863 None:intergenic 25.0%
! AAAATAGATTATTGAGAGAG+AGG - chr6.4:55015367-55015386 None:intergenic 25.0%
! ACAAATTATGGTAGCAATAA+TGG - chr6.4:55017088-55017107 None:intergenic 25.0%
! ACTCAAATGTTATTCATAGT+CGG + chr6.4:55016312-55016331 MS.gene81888:intron 25.0%
! ATGAGTAATAATAATGTTCG+AGG + chr6.4:55014650-55014669 MS.gene81888:intron 25.0%
! CAAACACATCCAAAAATATT+CGG + chr6.4:55015172-55015191 MS.gene81888:intron 25.0%
! CAGATGTATTTGAAAAGTTT+CGG + chr6.4:55016061-55016080 MS.gene81888:intron 25.0%
! CCAAATGGATAGAATAATTA+TGG - chr6.4:55016790-55016809 None:intergenic 25.0%
! CCATAATTATTCTATCCATT+TGG + chr6.4:55016787-55016806 MS.gene81888:intron 25.0%
! GAATAACATTTGAGTGTTAA+TGG - chr6.4:55016307-55016326 None:intergenic 25.0%
! GATTTATTATGATCAATGCA+AGG - chr6.4:55013612-55013631 None:intergenic 25.0%
! TCATGTTAAAATGATCATGT+GGG - chr6.4:55016750-55016769 None:intergenic 25.0%
! TCATTCTTATCATTGATAAG+TGG - chr6.4:55016606-55016625 None:intergenic 25.0%
! TCCAAAATAAAAATCATGTG+CGG + chr6.4:55014734-55014753 MS.gene81888:intron 25.0%
! TTAAAATTCAAGATACGGTA+CGG + chr6.4:55015617-55015636 MS.gene81888:intron 25.0%
! TTTAATATGCACCTCAAAAA+AGG + chr6.4:55016341-55016360 MS.gene81888:intron 25.0%
!! GAAACTTTTCAAATACATCT+GGG - chr6.4:55016062-55016081 None:intergenic 25.0%
!! GATTTTGCAGAATGAAAATT+GGG + chr6.4:55014026-55014045 MS.gene81888:intron 25.0%
!! TCGATAATTTAACTCTAAAG+AGG - chr6.4:55016441-55016460 None:intergenic 25.0%
!!! AATGAAAATCCATCACTTTT+AGG + chr6.4:55016658-55016677 MS.gene81888:intron 25.0%
!!! ATATGCTGTTTAATTTGGAT+CGG + chr6.4:55014807-55014826 MS.gene81888:intron 25.0%
!!! ATTCGGTTTTTTGTTGTTTT+CGG + chr6.4:55015189-55015208 MS.gene81888:intron 25.0%
!!! ATTGACATTTTTGTTGTTTC+TGG - chr6.4:55013538-55013557 None:intergenic 25.0%
!!! GGTTGAACTTTTTTTATGTT+CGG + chr6.4:55015425-55015444 MS.gene81888:intron 25.0%
!!! TAAAATTTACTTTTGCGGTT+CGG + chr6.4:55015091-55015110 MS.gene81888:intron 25.0%
!!! TTTGTTGTTTTCGGTTTTTT+TGG + chr6.4:55015198-55015217 MS.gene81888:intron 25.0%
AACTTAACTTTACAATGGTC+GGG + chr6.4:55015404-55015423 MS.gene81888:intron 30.0%
AATAAAAATCATGTGCGGTT+TGG + chr6.4:55014739-55014758 MS.gene81888:intron 30.0%
AATAGAGAAGAGACAATGAA+AGG + chr6.4:55014090-55014109 MS.gene81888:CDS 30.0%
ACAGACATAGAAAAACGATA+AGG + chr6.4:55015773-55015792 MS.gene81888:intron 30.0%
ACATACAACAATTGGGTTAT+TGG + chr6.4:55014237-55014256 MS.gene81888:intron 30.0%
AGCATATATTTGGATCGATT+CGG - chr6.4:55014794-55014813 None:intergenic 30.0%
CAACTTAACTTTACAATGGT+CGG + chr6.4:55015403-55015422 MS.gene81888:intron 30.0%
CATACAACAATTGGGTTATT+GGG + chr6.4:55014238-55014257 MS.gene81888:intron 30.0%
CATGTTAAAATGATCATGTG+GGG - chr6.4:55016749-55016768 None:intergenic 30.0%
CCTCAAAAAAGGCTTAAAAT+TGG + chr6.4:55016352-55016371 MS.gene81888:intron 30.0%
CTCATGTTAAAATGATCATG+TGG - chr6.4:55016751-55016770 None:intergenic 30.0%
GAGAGAGGAAAAAAATGAAT+AGG - chr6.4:55015352-55015371 None:intergenic 30.0%
TAATATATGAAGCACGTCAA+AGG - chr6.4:55016546-55016565 None:intergenic 30.0%
TAGAGAAATACAATGACTTG+AGG - chr6.4:55014322-55014341 None:intergenic 30.0%
TCTCCAACTTAACTTTACAA+TGG + chr6.4:55015399-55015418 MS.gene81888:intron 30.0%
TGGATGTACATACAACAATT+GGG + chr6.4:55014230-55014249 MS.gene81888:intron 30.0%
TTCTCTTGTAGTGTACAATT+TGG - chr6.4:55014365-55014384 None:intergenic 30.0%
TTTCATGCTACCAAATAACA+GGG + chr6.4:55013476-55013495 MS.gene81888:intron 30.0%
TTTGACGTGCTTCATATATT+AGG + chr6.4:55016545-55016564 MS.gene81888:intron 30.0%
! AAAACTCATGTTTTCTACAG+AGG + chr6.4:55013852-55013871 MS.gene81888:CDS 30.0%
! AAACTCATGTTTTCTACAGA+GGG + chr6.4:55013853-55013872 MS.gene81888:CDS 30.0%
! CGAAACTTTTCAAATACATC+TGG - chr6.4:55016063-55016082 None:intergenic 30.0%
! GCTTTGATATCTTTTCCAAA+TGG - chr6.4:55016805-55016824 None:intergenic 30.0%
! GGATTTTGCAGAATGAAAAT+TGG + chr6.4:55014025-55014044 MS.gene81888:intron 30.0%
!! ACCGCACATGATTTTTATTT+TGG - chr6.4:55014738-55014757 None:intergenic 30.0%
!! ATCGTTTTTCTATGTCTGTT+TGG - chr6.4:55015772-55015791 None:intergenic 30.0%
!! CCAATTTTAAGCCTTTTTTG+AGG - chr6.4:55016355-55016374 None:intergenic 30.0%
!!! AATCCATCACTTTTAGGTTT+TGG + chr6.4:55016664-55016683 MS.gene81888:intron 30.0%
!!! CGAATATTTTTGGATGTGTT+TGG - chr6.4:55015174-55015193 None:intergenic 30.0%
!!! GAGTTTTTTTCCCTGTTATT+TGG - chr6.4:55013489-55013508 None:intergenic 30.0%
!!! GTTTAATTTGGATCGGTTTT+TGG + chr6.4:55014814-55014833 MS.gene81888:intron 30.0%
!!! TACCAAATGATATCGACTTT+TGG + chr6.4:55016939-55016958 MS.gene81888:intron 30.0%
!!! TCATCCATTTTGAAGTATCT+GGG + chr6.4:55016190-55016209 MS.gene81888:intron 30.0%
!!! TGTTTTCGGTTTTTTTGGAT+CGG + chr6.4:55015203-55015222 MS.gene81888:intron 30.0%
!!! TTTGCGGTTTTATTTTGGAT+CGG + chr6.4:55015226-55015245 MS.gene81888:intron 30.0%
AAAGTAGAGAGAAGTAGAGA+AGG - chr6.4:55014419-55014438 None:intergenic 35.0%
AAGAAAGAAAGACTGACCAA+GGG - chr6.4:55013948-55013967 None:intergenic 35.0%
AAGAGACACAAAACAGACAA+TGG + chr6.4:55015855-55015874 MS.gene81888:intron 35.0%
AATGAAGATCCATCACTCTT+AGG + chr6.4:55016621-55016640 MS.gene81888:intron 35.0%
ACAGATAAAATCACCTTCTG+CGG - chr6.4:55017059-55017078 None:intergenic 35.0%
AGAGAATCCAAGTATCCAAA+TGG + chr6.4:55013729-55013748 MS.gene81888:CDS 35.0%
AGAGATGAAACTGCATGAAA+AGG + chr6.4:55017181-55017200 MS.gene81888:CDS 35.0%
ATACTCTCATGATACGTATC+GGG + chr6.4:55016120-55016139 MS.gene81888:intron 35.0%
ATATAGATGAATTCAAGGGC+AGG - chr6.4:55015282-55015301 None:intergenic 35.0%
ATCATTGATAAGTGGCGTTA+AGG - chr6.4:55016598-55016617 None:intergenic 35.0%
CAAATGTTATTCATAGTCGG+TGG + chr6.4:55016315-55016334 MS.gene81888:intron 35.0%
CACCAAAAGTCGATATCATT+TGG - chr6.4:55016944-55016963 None:intergenic 35.0%
CGACCATTGTAAAGTTAAGT+TGG - chr6.4:55015405-55015424 None:intergenic 35.0%
GAAATTGAATATCCTGTCCT+TGG + chr6.4:55016963-55016982 MS.gene81888:intron 35.0%
GAGAATCCAAGTATCCAAAT+GGG + chr6.4:55013730-55013749 MS.gene81888:CDS 35.0%
GATACTCTCATGATACGTAT+CGG + chr6.4:55016119-55016138 MS.gene81888:intron 35.0%
GGTGAAAAACCAATATGTGT+GGG - chr6.4:55016024-55016043 None:intergenic 35.0%
GTGGATGTACATACAACAAT+TGG + chr6.4:55014229-55014248 MS.gene81888:intron 35.0%
GTTTCATGCTACCAAATAAC+AGG + chr6.4:55013475-55013494 MS.gene81888:intron 35.0%
TATTGCATCATCACTACGAA+TGG - chr6.4:55013384-55013403 None:intergenic 35.0%
TATTGCATCATCACTGCAAA+TGG - chr6.4:55017213-55017232 None:intergenic 35.0%
TGAAGTCCAGATACATGAAA+CGG + chr6.4:55015552-55015571 MS.gene81888:intron 35.0%
TGCAGAATGAAAATTGGGTT+CGG + chr6.4:55014031-55014050 MS.gene81888:intron 35.0%
TTTCTATGTCTGTTTGGTCT+AGG - chr6.4:55015766-55015785 None:intergenic 35.0%
! AAGAAGAAGAGAGACTTTTG+AGG - chr6.4:55013636-55013655 None:intergenic 35.0%
! AGTTTGTAGCTCTGTTAGAT+CGG - chr6.4:55013758-55013777 None:intergenic 35.0%
! GGGTCATACTATTAGCTTAT+TGG + chr6.4:55014258-55014277 MS.gene81888:intron 35.0%
! TGAGTGTGTGTTGTTCTATT+AGG + chr6.4:55013686-55013705 MS.gene81888:intron 35.0%
! TTCGTAGTGATGATGCAATA+CGG + chr6.4:55013384-55013403 MS.gene81888:CDS 35.0%
! TTGCAGTGATGATGCAATAA+GGG + chr6.4:55017214-55017233 MS.gene81888:CDS 35.0%
! TTTGCAGTGATGATGCAATA+AGG + chr6.4:55017213-55017232 MS.gene81888:CDS 35.0%
!! GATGTGTTTGGATGTTGTTT+TGG - chr6.4:55015162-55015181 None:intergenic 35.0%
!! TAATAACCAACGAGTGTTGA+TGG + chr6.4:55016857-55016876 MS.gene81888:intron 35.0%
!!! ATCGGTTTGCGGTTTTATTT+TGG + chr6.4:55015221-55015240 MS.gene81888:intron 35.0%
!!! ATTTTTCGGTATCGACGTAT+CGG - chr6.4:55015596-55015615 None:intergenic 35.0%
!!! GGTTTTATTTTGGATCGGTT+TGG + chr6.4:55015231-55015250 MS.gene81888:intron 35.0%
!!! GTCATCCATTTTGAAGTATC+TGG + chr6.4:55016189-55016208 MS.gene81888:intron 35.0%
AGAAAGAAAGACTGACCAAG+GGG - chr6.4:55013947-55013966 None:intergenic 40.0%
CAATCAGTTCTTGAACCATG+AGG - chr6.4:55013885-55013904 None:intergenic 40.0%
CATAAGGAGGTTGAATTCGA+TGG - chr6.4:55017034-55017053 None:intergenic 40.0%
CCTCCAAAACCTAAAAGTGA+TGG - chr6.4:55016670-55016689 None:intergenic 40.0%
CGGTGAAAAACCAATATGTG+TGG - chr6.4:55016025-55016044 None:intergenic 40.0%
CTCATGGTTCAAGAACTGAT+TGG + chr6.4:55013883-55013902 MS.gene81888:CDS 40.0%
CTTGGAAAGCAAGCACAATA+TGG - chr6.4:55014284-55014303 None:intergenic 40.0%
GAAAAACCGCTAGATCGAAT+CGG - chr6.4:55015140-55015159 None:intergenic 40.0%
GAAACGGTACAGATGTGATA+CGG + chr6.4:55015568-55015587 MS.gene81888:intron 40.0%
GAAGAAAGAAAGACTGACCA+AGG - chr6.4:55013949-55013968 None:intergenic 40.0%
GAAGCCCAGATACTTCAAAA+TGG - chr6.4:55016197-55016216 None:intergenic 40.0%
GTGTAATCAAGCAGTTCTGT+GGG - chr6.4:55014580-55014599 None:intergenic 40.0%
TACAAACTCTGGTTACTGGA+AGG + chr6.4:55013770-55013789 MS.gene81888:CDS 40.0%
TCAAAGACTCGTGAAGTTGT+TGG + chr6.4:55013822-55013841 MS.gene81888:CDS 40.0%
TCTAACAGAGCTACAAACTC+TGG + chr6.4:55013759-55013778 MS.gene81888:CDS 40.0%
TCTCATCGTCGTTATCTTTG+TGG + chr6.4:55016507-55016526 MS.gene81888:intron 40.0%
TCTCCAAAACCTAAGAGTGA+TGG - chr6.4:55016633-55016652 None:intergenic 40.0%
TCTGTACCGTTTCATGTATC+TGG - chr6.4:55015561-55015580 None:intergenic 40.0%
TTGAATATCCTGTCCTTGGA+CGG + chr6.4:55016967-55016986 MS.gene81888:intron 40.0%
TTGATAAGTGGCGTTAAGGA+TGG - chr6.4:55016594-55016613 None:intergenic 40.0%
! ATATTTCTGAAGAGGAGAGG+TGG + chr6.4:55014060-55014079 MS.gene81888:CDS 40.0%
! GATCCATCACTCTTAGGTTT+TGG + chr6.4:55016627-55016646 MS.gene81888:intron 40.0%
! GTCTACAGATGACGCATTTT+CGG - chr6.4:55013580-55013599 None:intergenic 40.0%
! TGATACGTATCGGGAAGTAT+CGG + chr6.4:55016129-55016148 MS.gene81888:intron 40.0%
!! AAATCATGTGCGGTTTGGTT+TGG + chr6.4:55014744-55014763 MS.gene81888:intron 40.0%
!!! CCATCACTTTTAGGTTTTGG+AGG + chr6.4:55016667-55016686 MS.gene81888:intron 40.0%
!!! GGTTTTTTTGGATCGGTTTG+CGG + chr6.4:55015210-55015229 MS.gene81888:intron 40.0%
!!! TTGCGGTTCGGTTTTGAAAA+AGG + chr6.4:55015103-55015122 MS.gene81888:intron 40.0%
AAACGAGACAACCATGATCG+AGG - chr6.4:55014603-55014622 None:intergenic 45.0%
AACGAGACAACCATGATCGA+GGG - chr6.4:55014602-55014621 None:intergenic 45.0%
AGATGAATTCAAGGGCAGGT+TGG - chr6.4:55015278-55015297 None:intergenic 45.0%
AGGAACAAGCACCAATGACT+TGG - chr6.4:55014302-55014321 None:intergenic 45.0%
AGGTATCCATCAACACTCGT+TGG - chr6.4:55016866-55016885 None:intergenic 45.0%
ATCAGGTAGCCCACACATAT+TGG + chr6.4:55016012-55016031 MS.gene81888:intron 45.0%
CGCTAGATCGAATCGGATTT+CGG - chr6.4:55015133-55015152 None:intergenic 45.0%
CTCAGCTTCAAGTGCAAAAG+TGG + chr6.4:55014161-55014180 MS.gene81888:CDS 45.0%
CTTGATTACACCCTCGATCA+TGG + chr6.4:55014589-55014608 MS.gene81888:intron 45.0%
GAGCTACAAACTCTGGTTAC+TGG + chr6.4:55013766-55013785 MS.gene81888:CDS 45.0%
GGTGTAATCAAGCAGTTCTG+TGG - chr6.4:55014581-55014600 None:intergenic 45.0%
GTCTCAAAACCGATCCAAAC+CGG - chr6.4:55014700-55014719 None:intergenic 45.0%
GTGCTTGCTTTCCAAGTCAT+TGG + chr6.4:55014288-55014307 MS.gene81888:intron 45.0%
TCAGTTCTTGAACCATGAGG+TGG - chr6.4:55013882-55013901 None:intergenic 45.0%
TCGGTTCCCATTTGGATACT+TGG - chr6.4:55013739-55013758 None:intergenic 45.0%
TGAATATCCTGTCCTTGGAC+GGG + chr6.4:55016968-55016987 MS.gene81888:intron 45.0%
TTACTGGAAGGCAACTGGTT+TGG + chr6.4:55013782-55013801 MS.gene81888:CDS 45.0%
! CGAAATCCGATTCGATCTAG+CGG + chr6.4:55015131-55015150 MS.gene81888:intron 45.0%
! CGCATATTTCTGAAGAGGAG+AGG + chr6.4:55014057-55014076 MS.gene81888:CDS 45.0%
! CTGTTAGATCGGTTCCCATT+TGG - chr6.4:55013747-55013766 None:intergenic 45.0%
! GGTGTCGCATATTTCTGAAG+AGG + chr6.4:55014052-55014071 MS.gene81888:CDS 45.0%
!! GATACGTATCGGGAAGTATC+GGG + chr6.4:55016130-55016149 MS.gene81888:intron 45.0%
!! AAAAAATAAAATTTAATCTT+TGG + chr6.4:55016097-55016116 MS.gene81888:intron 5.0%
!! ATCAAATTAATATAATATAT+AGG + chr6.4:55015004-55015023 MS.gene81888:intron 5.0%
!!! TTAATTTTGAATAAAATTAT+AGG - chr6.4:55014519-55014538 None:intergenic 5.0%
AAAGGAGTGAAGCCAAGCAG+TGG + chr6.4:55014108-55014127 MS.gene81888:CDS 50.0%
AGAAAGACTGACCAAGGGGT+TGG - chr6.4:55013943-55013962 None:intergenic 50.0%
ATATCGGTGCAGGATACGCA+GGG + chr6.4:55016156-55016175 MS.gene81888:intron 50.0%
ATCACCTTCTGCGGCACATA+AGG - chr6.4:55017050-55017069 None:intergenic 50.0%
CCAATCTAGTAGCAGCTTCG+CGG - chr6.4:55013421-55013440 None:intergenic 50.0%
CGACGATGAGACAAGATCTG+AGG - chr6.4:55016498-55016517 None:intergenic 50.0%
TACAGAGGGAAACCACCTCA+TGG + chr6.4:55013867-55013886 MS.gene81888:CDS 50.0%
TCTGGTTACTGGAAGGCAAC+TGG + chr6.4:55013777-55013796 MS.gene81888:CDS 50.0%
! ACATCTGGGATACGAGCGAT+AGG - chr6.4:55016048-55016067 None:intergenic 50.0%
!! AATTCAAGGGCAGGTTGGTG+TGG - chr6.4:55015273-55015292 None:intergenic 50.0%
!! ATTCAAGGGCAGGTTGGTGT+GGG - chr6.4:55015272-55015291 None:intergenic 50.0%
!! GGGAAGTATCGGGCAGATAT+CGG + chr6.4:55016140-55016159 MS.gene81888:intron 50.0%
AATGAAGCACAGCCCGTCCA+AGG - chr6.4:55016983-55017002 None:intergenic 55.0%
ACCTCCTTATGTGCCGCAGA+AGG + chr6.4:55017043-55017062 MS.gene81888:intron 55.0%
ACCTTCTGCGGCACATAAGG+AGG - chr6.4:55017047-55017066 None:intergenic 55.0%
AGCAGTGGCAGCAACTTTGG+TGG + chr6.4:55014123-55014142 MS.gene81888:CDS 55.0%
ATCTGGGCTTCACAGCTCAC+AGG + chr6.4:55016206-55016225 MS.gene81888:intron 55.0%
CAGTGGCAGCAACTTTGGTG+GGG + chr6.4:55014125-55014144 MS.gene81888:CDS 55.0%
CCAAAGTTGCTGCCACTGCT+TGG - chr6.4:55014123-55014142 None:intergenic 55.0%
CCAAGCAGTGGCAGCAACTT+TGG + chr6.4:55014120-55014139 MS.gene81888:CDS 55.0%
CCGCGAAGCTGCTACTAGAT+TGG + chr6.4:55013418-55013437 MS.gene81888:CDS 55.0%
GATATCGGTGCAGGATACGC+AGG + chr6.4:55016155-55016174 MS.gene81888:intron 55.0%
GCAGTGGCAGCAACTTTGGT+GGG + chr6.4:55014124-55014143 MS.gene81888:CDS 55.0%
GGTTGGAGTGAGAGGAAGTG+AGG - chr6.4:55013926-55013945 None:intergenic 55.0%
TATCGGGCAGATATCGGTGC+AGG + chr6.4:55016146-55016165 MS.gene81888:intron 55.0%
TATCGGTGCAGGATACGCAG+GGG + chr6.4:55016157-55016176 MS.gene81888:intron 55.0%
TTCCTCTCACTCCAACCCCT+TGG + chr6.4:55013929-55013948 MS.gene81888:CDS 55.0%
! TCTGGGATACGAGCGATAGG+CGG - chr6.4:55016045-55016064 None:intergenic 55.0%
AATGTTCGAGGCCCACACCC+AGG + chr6.4:55014662-55014681 MS.gene81888:intron 60.0%
ATGTTCGAGGCCCACACCCA+GGG + chr6.4:55014663-55014682 MS.gene81888:intron 60.0%
GACCAAGGGGTTGGAGTGAG+AGG - chr6.4:55013934-55013953 None:intergenic 60.0%
!! AAGGGCAGGTTGGTGTGGGT+AGG - chr6.4:55015268-55015287 None:intergenic 60.0%
!! AGGGCAGGTTGGTGTGGGTA+GGG - chr6.4:55015267-55015286 None:intergenic 60.0%
!! GTTCGCGGTCCGGTTTGGAT+CGG + chr6.4:55014688-55014707 MS.gene81888:intron 60.0%
AACCGGACCGCGAACATCCC+TGG - chr6.4:55014683-55014702 None:intergenic 65.0%
ACCCAGGGATGTTCGCGGTC+CGG + chr6.4:55014678-55014697 MS.gene81888:intron 65.0%
ACCGCGAACATCCCTGGGTG+TGG - chr6.4:55014677-55014696 None:intergenic 65.0%
ACCGGACCGCGAACATCCCT+GGG - chr6.4:55014682-55014701 None:intergenic 65.0%
AGCACAGCCCGTCCAAGGAC+AGG - chr6.4:55016978-55016997 None:intergenic 65.0%
CCCACACCCAGGGATGTTCG+CGG + chr6.4:55014673-55014692 MS.gene81888:intron 65.0%
CCGCGAACATCCCTGGGTGT+GGG - chr6.4:55014676-55014695 None:intergenic 65.0%
GGGATGTTCGCGGTCCGGTT+TGG + chr6.4:55014683-55014702 MS.gene81888:intron 65.0%
!! GGGCAGGTTGGTGTGGGTAG+GGG - chr6.4:55015266-55015285 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 55013356 55017241 55013356 ID=MS.gene81888
chr6.4 mRNA 55013356 55017241 55013356 ID=MS.gene81888.t1;Parent=MS.gene81888
chr6.4 exon 55013356 55013439 55013356 ID=MS.gene81888.t1.exon1;Parent=MS.gene81888.t1
chr6.4 CDS 55013356 55013439 55013356 ID=cds.MS.gene81888.t1;Parent=MS.gene81888.t1
chr6.4 exon 55013708 55013950 55013708 ID=MS.gene81888.t1.exon2;Parent=MS.gene81888.t1
chr6.4 CDS 55013708 55013950 55013708 ID=cds.MS.gene81888.t1;Parent=MS.gene81888.t1
chr6.4 exon 55014036 55014182 55014036 ID=MS.gene81888.t1.exon3;Parent=MS.gene81888.t1
chr6.4 CDS 55014036 55014182 55014036 ID=cds.MS.gene81888.t1;Parent=MS.gene81888.t1
chr6.4 exon 55017170 55017241 55017170 ID=MS.gene81888.t1.exon4;Parent=MS.gene81888.t1
chr6.4 CDS 55017170 55017241 55017170 ID=cds.MS.gene81888.t1;Parent=MS.gene81888.t1
Gene Sequence

>MS.gene81888

ATGAAACTGCATGAAACGAATATCTCCATTCGTAGTGATGATGCAATACGGACACGAAAAGACCGCGAAGCTGCTACTAGATTGGTATAAGTTTTATTTACTTTGTGATTAAATATGTAGTTTCATGCTACCAAATAACAGGGAAAAAAACTCTTGAAGTGAACAATTTTCTAGCATTTCCAGAAACAACAAAAATGTCAATATAACTGTTTTCATTATTTCCGAAAATGCGTCATCTGTAGACAACAAATTACCTTGCATTGATCATAATAAATCACCTCAAAAGTCTCTCTTCTTCTTATTATCAAGTTAAAATAAATAGAATTAATTTGAGTGTGTGTTGTTCTATTAGGAGATGTACTTTTTCAGTACTAGAGAATCCAAGTATCCAAATGGGAACCGATCTAACAGAGCTACAAACTCTGGTTACTGGAAGGCAACTGGTTTGGACAAACAAATCATGAATTCAAAGACTCGTGAAGTTGTTGGTATGAAGAAAACTCATGTTTTCTACAGAGGGAAACCACCTCATGGTTCAAGAACTGATTGGATCATGCATGAATATCGCCTCACTTCCTCTCACTCCAACCCCTTGGTCAGTCTTTCTTTCTTCCTTTGTCTGAATTTGTAATTAAGAATTTAGTCTTGTAATATTAATATGAATGAATTGGATTTTGCAGAATGAAAATTGGGTTCGGTGTCGCATATTTCTGAAGAGGAGAGGTGGTGCTAAAAATAGAGAAGAGACAATGAAAGGAGTGAAGCCAAGCAGTGGCAGCAACTTTGGTGGGGTGAAGAAGAAGAACTCAGCTTCAAGTGCAAAAGTGGTTGTTTTCTACGATATGAAAGTGCAAATTGTTATGAATATTATAAGTGGATGTACATACAACAATTGGGTTATTGGGTCATACTATTAGCTTATTGGCCATATTGTGCTTGCTTTCCAAGTCATTGGTGCTTGTTCCTCAAGTCATTGTATTTCTCTATAAATAGAGCTCATATATAACCAAATTGTACACTACAAGAGAATAATAGAATCATCTCTCTTCTCTTTCTTTCTCCTTCTCTACTTCTCTCTACTTTATTCTTATTCCTATTTCCTTAGTTTTATAACATAAATTATCTATACCTATAATATATGAAAGTACAAATTATCTATACCTATAATTTTATTCAAAATTAAAATTTCAATGTAAATTTGTATTAACACAATAAAAATGTCCCACAGAACTGCTTGATTACACCCTCGATCATGGTTGTCTCGTTTAAAGTGTCAAAAAATGTCTGACAGAACATGAGTAATAATAATGTTCGAGGCCCACACCCAGGGATGTTCGCGGTCCGGTTTGGATCGGTTTTGAGACAAAAATTCAACCGATCCAAAATAAAAATCATGTGCGGTTTGGTTTGGATGATTATTCTAAAAAAATCTGATCCGAATCGATCCAAATATATGCTGTTTAATTTGGATCGGTTTTTGGATATCCAAAGTGCAACATGTAATTTTTTTTAGTAATATTAGTACTACAAATAAACAATAAAATAATAGGTTTGATACAAAATATAACACAAATGTATTAAACAAGTTAACATTACACAATGAAAATGATTGATTATATTTGAAATAGATGAAGTAGTAATAATATAGATCAAATTAATATAATATATAGGATTAAATACCAACAAACAATATATTATTGCAACATATAATACTAATAAAATAATAAATAAGTATTAAAATTTACTTTTGCGGTTCGGTTTTGAAAAAGGTGATCCGAAATCCGATTCGATCTAGCGGTTTTTCCAAAACAACATCCAAACACATCCAAAAATATTCGGTTTTTTGTTGTTTTCGGTTTTTTTGGATCGGTTTGCGGTTTTATTTTGGATCGGTTTGGATTTGAACACCCCTACCCACACCAACCTGCCCTTGAATTCATCTATATTAATCTCGTCTTTCTTCAACTCTCTCTCTCTCTCATCTCTCAAGTCTCCTATTCATTTTTTTCCTCTCTCTCAATAATCTATTTTATCTCAAATTTATCTCCAACTTAACTTTACAATGGTCGGGTTGAACTTTTTTTATGTTCGGCTTATATAATGAAAATCAATTATATCTCTAAAATAATTATAAATTTAAACAATTACATGGCTTTAACTTTTAAGCTAATATATTGAAAAATTTACTCATAGCTATGAAGTCCAGATACATGAAACGGTACAGATGTGATACGGCACCGATACGTCGATACCGAAAAATTTTAAAATTCAAGATACGGTACGGCTGAGATACATCAATATAAAATTAAATTTAAACTACATATTAAAACTAAAAATACAATCCTTCAAAAAAAAACTAAAAATACAAAATATGGACTAAAACTCAAGCAAAAAAATTGGCGCAAAACCTAGACCAAACAGACATAGAAAAACGATAAGGCACAACAATGAAATTGCATTCACACAACAATCAACAATAGCATCGTTCTCAAACAAATAAAGAGACACAAAACAGACAATGGAAACAATAGAAATAAAAATGTAAGTAATATTGATAATAAAGAAAGCGACAATTAGTCAACTATATATATGATATATCATAAATAGAAAACGTCATTACTAAGTCAATTACGTATATACCAAATATAATATAAACATCAGGTAGCCCACACATATTGGTTTTTCACCGCCTATCGCTCGTATCCCAGATGTATTTGAAAAGTTTCGGATAATTGTTTTAAAAAAAATAAAATTTAATCTTTGGATACTCTCATGATACGTATCGGGAAGTATCGGGCAGATATCGGTGCAGGATACGCAGGGGATACGATACGTCATCCATTTTGAAGTATCTGGGCTTCACAGCTCACAGGTAAGTTGATGTTAAAAAAGTTATTAAGGGACAATTTAATTTTTTTATTGGTTACTTTGCTTAAAGATGTAGTAGACCATTAACACTCAAATGTTATTCATAGTCGGTGGTATTTTAATATGCACCTCAAAAAAGGCTTAAAATTGGACACCACCAAAAAGATAATAAACTTTGTAAAAAAATAATAATAATGTAGTATTTTTACTAAAACCTCTTTAGAGTTAAATTATCGAGTCATCAGAACTCTTTATAATGACGTTGTGCATACCTCAGATCTTGTCTCATCGTCGTTATCTTTGTGGTTCGAGATCAGAACCTTTGACGTGCTTCATATATTAGGTTTTTTTAGATCTAAATATCTTACCATCCTTAACGCCACTTATCAATGATAAGAATGAAGATCCATCACTCTTAGGTTTTGGAGAGCAAGAATGAAAATCCATCACTTTTAGGTTTTGGAGGCCAAATTTAAAACTCTTCTTGAAAAAAAAGTGTGTTTTACAAGCAATTTTTTTTAGCCCCACATGATCATTTTAACATGAGATCTGAATTATTCTCTCCATAATTATTCTATCCATTTGGAAAAGATATCAAAGCATCAAGATTAAAATTCAATGATAAAGCGAAAGTAATAACCAACGAGTGTTGATGGATACCTTATATATCAAACTATTCTTCATGAAATATTGAATTTCAATCAAATCAACGAAGTACCAAATGATATCGACTTTTGGTGAAATTGAATATCCTGTCCTTGGACGGGCTGTGCTTCATTGTCATGAAGCTAGAGCTACAACATCATGCCATCGAATTCAACCTCCTTATGTGCCGCAGAAGGTGATTTTATCTGTTTGTTACCATTATTGCTACCATAATTTGTCTAATGTTTTTGTATCTTTCATTGATAAGATTAAAGATGATATTTGCATTATTTCATTGCAGATCTGTTTTAGAGAGATGAAACTGCATGAAAAGGATATCTCCATTTGCAGTGATGATGCAATAAGGGCATGA
Protein sequence

>MS.gene81888.t1

MKLHETNISIRSDDAIRTRKDREAATRLEMYFFSTRESKYPNGNRSNRATNSGYWKATGLDKQIMNSKTREVVGMKKTHVFYRGKPPHGSRTDWIMHEYRLTSSHSNPLNENWVRCRIFLKRRGGAKNREETMKGVKPSSGSNFGGVKKKNSASSAKVICFREMKLHEKDISICSDDAIRA