Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81987.t1 | XP_003602195.1 | 96.2 | 342 | 11 | 1 | 1 | 342 | 1 | 340 | 5.30E-183 | 650.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81987.t1 | Q8H0Y8 | 35.4 | 353 | 164 | 12 | 3 | 338 | 7 | 312 | 1.4e-35 | 151.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81987.t1 | B3U399 | 96.2 | 342 | 11 | 1 | 1 | 342 | 1 | 340 | 3.8e-183 | 650.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene81987.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81987.t1 | MTR_3g090860 | 96.491 | 342 | 10 | 1 | 1 | 342 | 1 | 340 | 0.0 | 682 |
MS.gene81987.t1 | MTR_8g099350 | 36.220 | 381 | 167 | 17 | 7 | 342 | 12 | 361 | 1.17e-52 | 177 |
MS.gene81987.t1 | MTR_7g117200 | 34.551 | 356 | 173 | 12 | 7 | 342 | 12 | 327 | 7.89e-50 | 169 |
MS.gene81987.t1 | MTR_8g027860 | 45.500 | 200 | 81 | 6 | 7 | 193 | 12 | 196 | 5.67e-45 | 157 |
MS.gene81987.t1 | MTR_7g073430 | 33.333 | 204 | 102 | 4 | 2 | 197 | 9 | 186 | 5.82e-26 | 105 |
MS.gene81987.t1 | MTR_7g073380 | 32.487 | 197 | 97 | 5 | 7 | 194 | 15 | 184 | 5.95e-25 | 102 |
MS.gene81987.t1 | MTR_5g067680 | 62.500 | 64 | 24 | 0 | 129 | 192 | 198 | 261 | 2.24e-23 | 99.8 |
MS.gene81987.t1 | MTR_8g005750 | 33.503 | 197 | 102 | 6 | 8 | 204 | 6 | 173 | 2.79e-22 | 95.1 |
MS.gene81987.t1 | MTR_0002s1250 | 29.000 | 200 | 116 | 4 | 1 | 198 | 1 | 176 | 2.60e-20 | 89.4 |
MS.gene81987.t1 | MTR_3g093830 | 31.532 | 222 | 112 | 9 | 13 | 223 | 23 | 215 | 6.38e-20 | 89.0 |
MS.gene81987.t1 | MTR_1g009613 | 40.876 | 137 | 54 | 8 | 84 | 201 | 207 | 335 | 5.94e-19 | 86.7 |
MS.gene81987.t1 | MTR_2g075690 | 31.220 | 205 | 106 | 7 | 5 | 192 | 14 | 200 | 9.61e-19 | 85.5 |
MS.gene81987.t1 | MTR_5g067700 | 42.697 | 89 | 51 | 0 | 104 | 192 | 77 | 165 | 1.18e-18 | 84.3 |
MS.gene81987.t1 | MTR_5g073620 | 38.384 | 99 | 61 | 0 | 125 | 223 | 664 | 762 | 4.22e-18 | 85.9 |
MS.gene81987.t1 | MTR_2g075750 | 46.667 | 75 | 37 | 1 | 132 | 203 | 27 | 101 | 5.12e-18 | 81.3 |
MS.gene81987.t1 | MTR_2g075610 | 38.318 | 107 | 52 | 3 | 104 | 207 | 11 | 106 | 1.84e-17 | 79.7 |
MS.gene81987.t1 | MTR_2g075680 | 31.034 | 203 | 116 | 5 | 5 | 192 | 14 | 207 | 4.21e-17 | 80.9 |
MS.gene81987.t1 | MTR_2g075700 | 39.773 | 88 | 45 | 1 | 105 | 192 | 124 | 203 | 5.72e-17 | 80.9 |
MS.gene81987.t1 | MTR_5g016610 | 44.828 | 87 | 44 | 3 | 104 | 190 | 172 | 254 | 1.85e-16 | 78.6 |
MS.gene81987.t1 | MTR_8g098945 | 51.562 | 64 | 29 | 1 | 127 | 190 | 123 | 184 | 4.78e-16 | 77.4 |
MS.gene81987.t1 | MTR_8g028565 | 42.105 | 95 | 52 | 2 | 134 | 227 | 156 | 248 | 4.90e-16 | 78.2 |
MS.gene81987.t1 | MTR_7g079010 | 35.938 | 128 | 72 | 3 | 67 | 192 | 80 | 199 | 5.41e-16 | 76.3 |
MS.gene81987.t1 | MTR_4g094908 | 41.509 | 106 | 48 | 6 | 101 | 199 | 236 | 334 | 6.64e-16 | 77.8 |
MS.gene81987.t1 | MTR_7g079040 | 31.746 | 189 | 122 | 4 | 103 | 286 | 124 | 310 | 2.26e-15 | 76.3 |
MS.gene81987.t1 | MTR_1g070455 | 56.140 | 57 | 23 | 1 | 134 | 190 | 294 | 348 | 4.03e-15 | 75.9 |
MS.gene81987.t1 | MTR_7g109600 | 54.839 | 62 | 26 | 1 | 129 | 190 | 49 | 108 | 6.96e-15 | 73.9 |
MS.gene81987.t1 | MTR_8g087000 | 55.000 | 60 | 25 | 1 | 131 | 190 | 75 | 132 | 1.25e-14 | 72.8 |
MS.gene81987.t1 | MTR_8g087000 | 55.000 | 60 | 25 | 1 | 131 | 190 | 74 | 131 | 1.27e-14 | 72.8 |
MS.gene81987.t1 | MTR_7g011820 | 47.692 | 65 | 30 | 2 | 126 | 190 | 221 | 281 | 1.95e-14 | 74.3 |
MS.gene81987.t1 | MTR_7g011820 | 50.847 | 59 | 26 | 1 | 132 | 190 | 409 | 464 | 2.48e-13 | 71.2 |
MS.gene81987.t1 | MTR_2g083870 | 39.823 | 113 | 54 | 3 | 86 | 190 | 29 | 135 | 2.12e-14 | 72.4 |
MS.gene81987.t1 | MTR_4g127040 | 36.522 | 115 | 65 | 3 | 81 | 190 | 189 | 300 | 2.30e-14 | 73.2 |
MS.gene81987.t1 | MTR_8g032510 | 48.333 | 60 | 31 | 0 | 133 | 192 | 119 | 178 | 2.82e-14 | 72.8 |
MS.gene81987.t1 | MTR_2g016770 | 51.515 | 66 | 27 | 2 | 128 | 190 | 27 | 90 | 2.88e-14 | 71.2 |
MS.gene81987.t1 | MTR_8g007270 | 52.542 | 59 | 25 | 1 | 132 | 190 | 153 | 208 | 3.18e-14 | 71.6 |
MS.gene81987.t1 | MTR_2g016770 | 51.515 | 66 | 27 | 2 | 128 | 190 | 19 | 82 | 3.94e-14 | 70.9 |
MS.gene81987.t1 | MTR_8g092140 | 52.542 | 59 | 25 | 1 | 132 | 190 | 159 | 214 | 3.98e-14 | 71.2 |
MS.gene81987.t1 | MTR_7g028415 | 53.333 | 60 | 25 | 1 | 132 | 191 | 92 | 148 | 4.37e-14 | 69.7 |
MS.gene81987.t1 | MTR_7g028710 | 53.333 | 60 | 25 | 1 | 132 | 191 | 92 | 148 | 4.37e-14 | 69.7 |
MS.gene81987.t1 | MTR_7g062220 | 55.738 | 61 | 24 | 1 | 130 | 190 | 121 | 178 | 4.53e-14 | 72.4 |
MS.gene81987.t1 | MTR_2g032030 | 44.231 | 104 | 50 | 5 | 134 | 233 | 268 | 367 | 4.55e-14 | 73.2 |
MS.gene81987.t1 | MTR_2g032030 | 44.231 | 104 | 50 | 5 | 134 | 233 | 268 | 367 | 5.28e-14 | 73.2 |
MS.gene81987.t1 | MTR_7g110720 | 51.351 | 74 | 33 | 2 | 118 | 190 | 200 | 271 | 5.53e-14 | 72.8 |
MS.gene81987.t1 | MTR_7g110720 | 51.351 | 74 | 33 | 2 | 118 | 190 | 173 | 244 | 5.76e-14 | 72.8 |
MS.gene81987.t1 | MTR_3g095080 | 52.542 | 59 | 25 | 1 | 132 | 190 | 167 | 222 | 8.85e-14 | 70.5 |
MS.gene81987.t1 | MTR_3g095080 | 52.542 | 59 | 25 | 1 | 132 | 190 | 143 | 198 | 1.19e-13 | 69.7 |
MS.gene81987.t1 | MTR_1g099600 | 41.176 | 85 | 42 | 2 | 106 | 190 | 164 | 240 | 1.40e-13 | 70.9 |
MS.gene81987.t1 | MTR_4g094588 | 41.558 | 77 | 42 | 1 | 132 | 208 | 177 | 250 | 1.59e-13 | 70.9 |
MS.gene81987.t1 | MTR_7g109800 | 51.667 | 60 | 26 | 1 | 132 | 191 | 144 | 200 | 2.06e-13 | 70.1 |
MS.gene81987.t1 | MTR_7g080020 | 53.448 | 58 | 23 | 2 | 133 | 190 | 280 | 333 | 2.26e-13 | 71.6 |
MS.gene81987.t1 | MTR_7g080020 | 33.333 | 129 | 66 | 5 | 93 | 207 | 451 | 573 | 3.47e-11 | 64.7 |
MS.gene81987.t1 | MTR_5g043880 | 52.542 | 59 | 25 | 1 | 132 | 190 | 123 | 178 | 3.22e-13 | 69.3 |
MS.gene81987.t1 | MTR_5g091390 | 49.206 | 63 | 27 | 2 | 132 | 192 | 156 | 215 | 4.44e-13 | 69.3 |
MS.gene81987.t1 | MTR_3g009470 | 47.368 | 76 | 34 | 3 | 131 | 204 | 278 | 349 | 5.32e-13 | 70.1 |
MS.gene81987.t1 | MTR_3g009470 | 47.368 | 76 | 34 | 3 | 131 | 204 | 278 | 349 | 5.52e-13 | 70.5 |
MS.gene81987.t1 | MTR_3g009470 | 33.628 | 113 | 65 | 3 | 132 | 242 | 494 | 598 | 1.30e-11 | 66.2 |
MS.gene81987.t1 | MTR_2g088000 | 54.237 | 59 | 25 | 1 | 132 | 190 | 348 | 404 | 5.73e-13 | 70.1 |
MS.gene81987.t1 | MTR_1g015140 | 50.000 | 60 | 27 | 1 | 132 | 191 | 101 | 157 | 5.87e-13 | 66.6 |
MS.gene81987.t1 | MTR_4g082580 | 50.000 | 58 | 26 | 1 | 133 | 190 | 145 | 199 | 6.22e-13 | 69.7 |
MS.gene81987.t1 | MTR_4g082580 | 47.458 | 59 | 28 | 1 | 132 | 190 | 277 | 332 | 4.35e-11 | 63.9 |
MS.gene81987.t1 | MTR_8g096730 | 36.842 | 76 | 45 | 1 | 132 | 207 | 69 | 141 | 1.06e-12 | 65.5 |
MS.gene81987.t1 | MTR_4g132430 | 51.667 | 60 | 27 | 1 | 132 | 191 | 126 | 183 | 1.26e-12 | 68.6 |
MS.gene81987.t1 | MTR_1g086790 | 50.000 | 60 | 27 | 1 | 132 | 191 | 157 | 213 | 1.43e-12 | 68.2 |
MS.gene81987.t1 | MTR_3g104750 | 48.333 | 60 | 28 | 1 | 132 | 191 | 103 | 159 | 1.49e-12 | 65.5 |
MS.gene81987.t1 | MTR_2g023930 | 52.542 | 59 | 26 | 1 | 132 | 190 | 304 | 360 | 1.59e-12 | 68.6 |
MS.gene81987.t1 | MTR_5g094430 | 49.153 | 59 | 27 | 1 | 132 | 190 | 363 | 418 | 1.67e-12 | 68.6 |
MS.gene81987.t1 | MTR_5g094430 | 47.059 | 68 | 30 | 3 | 125 | 190 | 190 | 253 | 3.07e-11 | 64.7 |
MS.gene81987.t1 | MTR_5g042920 | 46.479 | 71 | 33 | 3 | 121 | 190 | 138 | 204 | 1.83e-12 | 68.2 |
MS.gene81987.t1 | MTR_5g042920 | 49.153 | 59 | 27 | 1 | 132 | 190 | 319 | 374 | 2.89e-12 | 67.8 |
MS.gene81987.t1 | MTR_7g100510 | 34.454 | 119 | 58 | 5 | 87 | 190 | 302 | 415 | 1.89e-12 | 68.2 |
MS.gene81987.t1 | MTR_7g100510 | 50.000 | 60 | 26 | 2 | 131 | 190 | 187 | 242 | 1.09e-11 | 65.9 |
MS.gene81987.t1 | MTR_2g033820 | 50.000 | 60 | 27 | 1 | 132 | 191 | 202 | 258 | 2.00e-12 | 67.8 |
MS.gene81987.t1 | MTR_4g132430 | 51.667 | 60 | 27 | 1 | 132 | 191 | 260 | 317 | 2.66e-12 | 67.8 |
MS.gene81987.t1 | MTR_3g056100 | 49.153 | 59 | 27 | 1 | 132 | 190 | 401 | 456 | 2.74e-12 | 68.2 |
MS.gene81987.t1 | MTR_3g056100 | 47.692 | 65 | 30 | 2 | 126 | 190 | 236 | 296 | 2.35e-11 | 65.1 |
MS.gene81987.t1 | MTR_5g094430 | 49.153 | 59 | 27 | 1 | 132 | 190 | 251 | 306 | 2.89e-12 | 67.8 |
MS.gene81987.t1 | MTR_5g094430 | 47.059 | 68 | 30 | 3 | 125 | 190 | 78 | 141 | 4.31e-11 | 63.9 |
MS.gene81987.t1 | MTR_5g094430 | 49.153 | 59 | 27 | 1 | 132 | 190 | 229 | 284 | 2.93e-12 | 67.4 |
MS.gene81987.t1 | MTR_5g094430 | 47.059 | 68 | 30 | 3 | 125 | 190 | 56 | 119 | 4.82e-11 | 63.9 |
MS.gene81987.t1 | MTR_3g056100 | 49.153 | 59 | 27 | 1 | 132 | 190 | 414 | 469 | 2.99e-12 | 67.8 |
MS.gene81987.t1 | MTR_3g056100 | 47.692 | 65 | 30 | 2 | 126 | 190 | 236 | 296 | 2.45e-11 | 65.1 |
MS.gene81987.t1 | MTR_3g108960 | 50.877 | 57 | 26 | 1 | 134 | 190 | 315 | 369 | 3.46e-12 | 67.4 |
MS.gene81987.t1 | MTR_3g056100 | 49.153 | 59 | 27 | 1 | 132 | 190 | 257 | 312 | 4.20e-12 | 67.0 |
MS.gene81987.t1 | MTR_3g056100 | 47.692 | 65 | 30 | 2 | 126 | 190 | 92 | 152 | 3.39e-11 | 64.3 |
MS.gene81987.t1 | MTR_3g056100 | 49.153 | 59 | 27 | 1 | 132 | 190 | 270 | 325 | 4.49e-12 | 67.0 |
MS.gene81987.t1 | MTR_3g056100 | 47.692 | 65 | 30 | 2 | 126 | 190 | 92 | 152 | 3.23e-11 | 64.7 |
MS.gene81987.t1 | MTR_7g080000 | 52.542 | 59 | 24 | 2 | 132 | 190 | 233 | 287 | 4.53e-12 | 67.4 |
MS.gene81987.t1 | MTR_0117s0040 | 45.714 | 70 | 35 | 2 | 134 | 202 | 75 | 142 | 5.10e-12 | 65.5 |
MS.gene81987.t1 | MTR_1g013760 | 52.632 | 57 | 25 | 1 | 134 | 190 | 141 | 195 | 5.56e-12 | 65.9 |
MS.gene81987.t1 | MTR_5g074400 | 50.000 | 58 | 25 | 2 | 133 | 190 | 243 | 296 | 1.25e-11 | 65.9 |
MS.gene81987.t1 | MTR_5g074400 | 49.153 | 59 | 27 | 1 | 132 | 190 | 419 | 474 | 2.35e-11 | 65.1 |
MS.gene81987.t1 | MTR_3g031220 | 50.000 | 58 | 25 | 2 | 133 | 190 | 198 | 251 | 1.27e-11 | 65.5 |
MS.gene81987.t1 | MTR_8g069935 | 34.524 | 84 | 46 | 3 | 107 | 190 | 312 | 386 | 1.31e-11 | 65.9 |
MS.gene81987.t1 | MTR_3g031220 | 46.032 | 63 | 31 | 1 | 132 | 194 | 364 | 423 | 1.79e-11 | 65.5 |
MS.gene81987.t1 | MTR_3g031220 | 50.000 | 58 | 25 | 2 | 133 | 190 | 198 | 251 | 2.05e-11 | 65.1 |
MS.gene81987.t1 | MTR_2g045360 | 33.562 | 146 | 73 | 5 | 134 | 262 | 212 | 350 | 2.25e-11 | 65.1 |
MS.gene81987.t1 | MTR_4g122530 | 47.458 | 59 | 28 | 1 | 132 | 190 | 207 | 262 | 2.41e-11 | 64.7 |
MS.gene81987.t1 | MTR_4g013260 | 40.909 | 88 | 48 | 2 | 104 | 190 | 306 | 390 | 2.51e-11 | 65.1 |
MS.gene81987.t1 | MTR_4g013260 | 46.552 | 58 | 28 | 2 | 133 | 190 | 184 | 238 | 8.63e-11 | 63.2 |
MS.gene81987.t1 | MTR_7g071120 | 50.000 | 58 | 25 | 2 | 133 | 190 | 166 | 219 | 2.52e-11 | 65.1 |
MS.gene81987.t1 | MTR_8g067635 | 46.552 | 58 | 29 | 1 | 133 | 190 | 349 | 404 | 2.66e-11 | 65.1 |
MS.gene81987.t1 | MTR_5g097490 | 47.541 | 61 | 29 | 1 | 130 | 190 | 249 | 306 | 2.84e-11 | 64.3 |
MS.gene81987.t1 | MTR_8g067650 | 46.552 | 58 | 29 | 1 | 133 | 190 | 339 | 394 | 3.51e-11 | 64.7 |
MS.gene81987.t1 | MTR_4g049790 | 29.310 | 174 | 104 | 7 | 24 | 190 | 206 | 367 | 5.48e-11 | 63.9 |
MS.gene81987.t1 | MTR_7g009730 | 43.243 | 74 | 39 | 2 | 118 | 190 | 203 | 274 | 7.46e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81987.t1 | AT4G23810 | 35.424 | 271 | 137 | 8 | 3 | 250 | 10 | 265 | 1.88e-46 | 160 |
MS.gene81987.t1 | AT4G11070 | 34.844 | 353 | 166 | 11 | 3 | 338 | 7 | 312 | 2.26e-46 | 160 |
MS.gene81987.t1 | AT5G24110 | 39.910 | 223 | 102 | 6 | 5 | 225 | 14 | 206 | 2.06e-42 | 149 |
MS.gene81987.t1 | AT4G11070 | 32.258 | 341 | 159 | 8 | 3 | 338 | 7 | 280 | 4.01e-40 | 142 |
MS.gene81987.t1 | AT2G46400 | 30.816 | 331 | 166 | 12 | 1 | 321 | 2 | 279 | 1.42e-30 | 118 |
MS.gene81987.t1 | AT2G40750 | 32.227 | 211 | 110 | 7 | 5 | 193 | 13 | 212 | 3.59e-25 | 104 |
MS.gene81987.t1 | AT3G56400 | 33.333 | 186 | 107 | 3 | 7 | 192 | 11 | 179 | 4.56e-24 | 100 |
MS.gene81987.t1 | AT2G40740 | 59.677 | 62 | 25 | 0 | 131 | 192 | 171 | 232 | 4.75e-22 | 94.7 |
MS.gene81987.t1 | AT2G40740 | 59.677 | 62 | 25 | 0 | 131 | 192 | 180 | 241 | 6.12e-22 | 94.7 |
MS.gene81987.t1 | AT5G01900 | 28.708 | 209 | 124 | 5 | 5 | 213 | 6 | 189 | 2.47e-17 | 80.9 |
MS.gene81987.t1 | AT1G66550 | 26.786 | 224 | 115 | 5 | 8 | 216 | 10 | 199 | 3.03e-17 | 80.5 |
MS.gene81987.t1 | AT5G45260 | 59.649 | 57 | 23 | 0 | 134 | 190 | 1209 | 1265 | 8.67e-17 | 82.0 |
MS.gene81987.t1 | AT1G66550 | 27.189 | 217 | 118 | 4 | 8 | 216 | 10 | 194 | 1.14e-16 | 79.0 |
MS.gene81987.t1 | AT5G52830 | 48.837 | 86 | 36 | 2 | 106 | 191 | 144 | 221 | 5.02e-16 | 78.6 |
MS.gene81987.t1 | AT2G23320 | 46.667 | 90 | 38 | 5 | 104 | 190 | 213 | 295 | 5.13e-16 | 78.2 |
MS.gene81987.t1 | AT1G29280 | 56.667 | 60 | 24 | 1 | 131 | 190 | 72 | 129 | 9.61e-16 | 76.6 |
MS.gene81987.t1 | AT5G49520 | 46.154 | 78 | 39 | 1 | 132 | 209 | 220 | 294 | 1.06e-15 | 77.8 |
MS.gene81987.t1 | AT1G66600 | 30.481 | 187 | 94 | 4 | 8 | 192 | 10 | 162 | 1.54e-15 | 75.5 |
MS.gene81987.t1 | AT4G24240 | 40.187 | 107 | 60 | 3 | 84 | 190 | 234 | 336 | 1.56e-15 | 77.0 |
MS.gene81987.t1 | AT1G64000 | 43.478 | 92 | 41 | 4 | 104 | 192 | 89 | 172 | 1.63e-15 | 74.3 |
MS.gene81987.t1 | AT4G01250 | 52.308 | 65 | 29 | 1 | 126 | 190 | 121 | 183 | 2.25e-15 | 75.9 |
MS.gene81987.t1 | AT4G31550 | 56.140 | 57 | 23 | 1 | 134 | 190 | 247 | 301 | 4.11e-15 | 75.5 |
MS.gene81987.t1 | AT4G31550 | 56.140 | 57 | 23 | 1 | 134 | 190 | 246 | 300 | 4.24e-15 | 75.5 |
MS.gene81987.t1 | AT5G41570 | 52.381 | 63 | 25 | 2 | 132 | 192 | 97 | 156 | 7.43e-15 | 72.4 |
MS.gene81987.t1 | AT2G03340 | 33.548 | 155 | 85 | 7 | 45 | 190 | 158 | 303 | 9.90e-15 | 75.5 |
MS.gene81987.t1 | AT2G03340 | 47.458 | 59 | 28 | 1 | 132 | 190 | 414 | 469 | 1.87e-11 | 65.5 |
MS.gene81987.t1 | AT2G46130 | 50.794 | 63 | 26 | 2 | 132 | 192 | 29 | 88 | 1.39e-14 | 69.7 |
MS.gene81987.t1 | AT2G30590 | 43.617 | 94 | 42 | 5 | 100 | 190 | 283 | 368 | 1.58e-14 | 74.3 |
MS.gene81987.t1 | AT4G26440 | 53.846 | 65 | 26 | 2 | 126 | 190 | 171 | 231 | 1.60e-14 | 75.1 |
MS.gene81987.t1 | AT4G26440 | 43.333 | 90 | 42 | 3 | 132 | 215 | 371 | 457 | 4.29e-12 | 67.4 |
MS.gene81987.t1 | AT5G28650 | 40.179 | 112 | 54 | 3 | 79 | 190 | 219 | 317 | 1.77e-14 | 73.9 |
MS.gene81987.t1 | AT4G23550 | 50.000 | 70 | 33 | 1 | 121 | 190 | 128 | 195 | 2.00e-14 | 73.6 |
MS.gene81987.t1 | AT2G24570 | 56.140 | 57 | 23 | 1 | 134 | 190 | 244 | 298 | 2.42e-14 | 73.2 |
MS.gene81987.t1 | AT2G44745 | 52.542 | 59 | 25 | 1 | 132 | 190 | 144 | 199 | 2.59e-14 | 71.6 |
MS.gene81987.t1 | AT4G04450 | 39.516 | 124 | 57 | 4 | 100 | 207 | 162 | 283 | 2.62e-14 | 73.9 |
MS.gene81987.t1 | AT5G22570 | 35.789 | 95 | 61 | 0 | 134 | 228 | 111 | 205 | 4.77e-14 | 72.0 |
MS.gene81987.t1 | AT4G04450 | 39.516 | 124 | 57 | 4 | 100 | 207 | 256 | 377 | 5.53e-14 | 73.2 |
MS.gene81987.t1 | AT4G18170 | 46.377 | 69 | 34 | 1 | 132 | 200 | 171 | 236 | 1.03e-13 | 71.2 |
MS.gene81987.t1 | AT3G04670 | 43.678 | 87 | 45 | 2 | 104 | 190 | 235 | 317 | 1.06e-13 | 71.6 |
MS.gene81987.t1 | AT3G58710 | 55.000 | 60 | 25 | 1 | 131 | 190 | 69 | 126 | 1.13e-13 | 70.9 |
MS.gene81987.t1 | AT3G58710 | 55.000 | 60 | 25 | 1 | 131 | 190 | 68 | 125 | 1.18e-13 | 70.5 |
MS.gene81987.t1 | AT2G34830 | 56.140 | 57 | 23 | 1 | 134 | 190 | 225 | 279 | 1.32e-13 | 71.6 |
MS.gene81987.t1 | AT2G34830 | 56.140 | 57 | 23 | 1 | 134 | 190 | 216 | 270 | 1.35e-13 | 71.6 |
MS.gene81987.t1 | AT1G13960 | 42.169 | 83 | 43 | 3 | 108 | 190 | 205 | 282 | 1.71e-13 | 71.6 |
MS.gene81987.t1 | AT1G13960 | 49.153 | 59 | 27 | 1 | 132 | 190 | 408 | 463 | 1.91e-12 | 68.6 |
MS.gene81987.t1 | AT5G26170 | 49.153 | 59 | 27 | 1 | 132 | 190 | 112 | 167 | 1.78e-13 | 68.2 |
MS.gene81987.t1 | AT5G07100 | 43.023 | 86 | 40 | 3 | 111 | 190 | 113 | 195 | 1.91e-13 | 68.9 |
MS.gene81987.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.30e-11 | 63.9 |
MS.gene81987.t1 | AT5G07100 | 43.023 | 86 | 40 | 3 | 111 | 190 | 113 | 195 | 1.91e-13 | 68.9 |
MS.gene81987.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.30e-11 | 63.9 |
MS.gene81987.t1 | AT5G07100 | 43.023 | 86 | 40 | 3 | 111 | 190 | 113 | 195 | 1.91e-13 | 68.9 |
MS.gene81987.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.30e-11 | 63.9 |
MS.gene81987.t1 | AT5G07100 | 43.023 | 86 | 40 | 3 | 111 | 190 | 113 | 195 | 1.91e-13 | 68.9 |
MS.gene81987.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.30e-11 | 63.9 |
MS.gene81987.t1 | AT5G07100 | 41.304 | 92 | 45 | 3 | 111 | 196 | 206 | 294 | 1.96e-13 | 70.5 |
MS.gene81987.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 117 | 171 | 1.23e-11 | 65.1 |
MS.gene81987.t1 | AT1G80590 | 37.755 | 98 | 58 | 1 | 134 | 228 | 86 | 183 | 2.00e-13 | 69.3 |
MS.gene81987.t1 | AT2G37260 | 46.377 | 69 | 34 | 1 | 122 | 190 | 256 | 321 | 2.43e-13 | 70.5 |
MS.gene81987.t1 | AT2G37260 | 46.377 | 69 | 34 | 1 | 122 | 190 | 258 | 323 | 2.44e-13 | 70.5 |
MS.gene81987.t1 | AT2G37260 | 46.377 | 69 | 34 | 1 | 122 | 190 | 338 | 403 | 2.55e-13 | 70.9 |
MS.gene81987.t1 | AT3G01080 | 53.333 | 60 | 24 | 2 | 131 | 190 | 203 | 258 | 2.95e-13 | 70.1 |
MS.gene81987.t1 | AT1G13960 | 42.169 | 83 | 43 | 3 | 108 | 190 | 52 | 129 | 3.05e-13 | 70.5 |
MS.gene81987.t1 | AT1G13960 | 49.153 | 59 | 27 | 1 | 132 | 190 | 255 | 310 | 2.37e-12 | 67.8 |
MS.gene81987.t1 | AT1G29860 | 46.377 | 69 | 34 | 1 | 132 | 200 | 135 | 200 | 4.09e-13 | 69.3 |
MS.gene81987.t1 | AT3G01080 | 48.611 | 72 | 33 | 2 | 131 | 202 | 165 | 232 | 5.56e-13 | 69.7 |
MS.gene81987.t1 | AT3G01080 | 39.560 | 91 | 47 | 2 | 105 | 190 | 273 | 360 | 5.58e-12 | 67.0 |
MS.gene81987.t1 | AT3G01080 | 53.333 | 60 | 24 | 2 | 131 | 190 | 203 | 258 | 5.82e-13 | 70.1 |
MS.gene81987.t1 | AT3G01080 | 39.560 | 91 | 47 | 2 | 105 | 190 | 311 | 398 | 5.20e-12 | 67.0 |
MS.gene81987.t1 | AT4G26640 | 37.079 | 89 | 53 | 1 | 132 | 220 | 340 | 425 | 5.85e-13 | 70.1 |
MS.gene81987.t1 | AT4G26640 | 50.000 | 58 | 25 | 2 | 133 | 190 | 171 | 224 | 8.24e-11 | 63.5 |
MS.gene81987.t1 | AT4G26640 | 37.079 | 89 | 53 | 1 | 132 | 220 | 308 | 393 | 6.86e-13 | 69.7 |
MS.gene81987.t1 | AT4G26640 | 37.079 | 89 | 53 | 1 | 132 | 220 | 380 | 465 | 7.06e-13 | 69.7 |
MS.gene81987.t1 | AT4G26640 | 50.000 | 58 | 25 | 2 | 133 | 190 | 211 | 264 | 9.78e-11 | 63.2 |
MS.gene81987.t1 | AT4G01720 | 54.237 | 59 | 25 | 1 | 132 | 190 | 238 | 294 | 7.91e-13 | 69.7 |
MS.gene81987.t1 | AT4G26640 | 37.079 | 89 | 53 | 1 | 132 | 220 | 204 | 289 | 8.19e-13 | 69.3 |
MS.gene81987.t1 | AT4G26640 | 37.079 | 89 | 53 | 1 | 132 | 220 | 204 | 289 | 8.19e-13 | 69.3 |
MS.gene81987.t1 | AT4G26640 | 37.079 | 89 | 53 | 1 | 132 | 220 | 204 | 289 | 8.19e-13 | 69.3 |
MS.gene81987.t1 | AT4G26640 | 37.079 | 89 | 53 | 1 | 132 | 220 | 204 | 289 | 8.19e-13 | 69.3 |
MS.gene81987.t1 | AT1G30650 | 56.140 | 57 | 23 | 1 | 134 | 190 | 218 | 272 | 9.79e-13 | 69.3 |
MS.gene81987.t1 | AT1G66560 | 45.000 | 60 | 33 | 0 | 133 | 192 | 103 | 162 | 1.05e-12 | 67.4 |
MS.gene81987.t1 | AT1G69310 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 1.06e-12 | 68.2 |
MS.gene81987.t1 | AT1G69310 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 1.06e-12 | 68.2 |
MS.gene81987.t1 | AT1G69310 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 1.06e-12 | 68.2 |
MS.gene81987.t1 | AT5G46350 | 45.455 | 66 | 33 | 1 | 132 | 197 | 182 | 244 | 1.65e-12 | 67.8 |
MS.gene81987.t1 | AT2G25000 | 50.000 | 62 | 29 | 1 | 132 | 193 | 102 | 161 | 2.43e-12 | 66.2 |
MS.gene81987.t1 | AT2G25000 | 50.000 | 62 | 29 | 1 | 132 | 193 | 102 | 161 | 2.43e-12 | 66.2 |
MS.gene81987.t1 | AT1G62300 | 47.297 | 74 | 36 | 2 | 118 | 190 | 296 | 367 | 2.50e-12 | 68.2 |
MS.gene81987.t1 | AT5G56270 | 49.231 | 65 | 29 | 2 | 126 | 190 | 266 | 326 | 2.83e-12 | 68.2 |
MS.gene81987.t1 | AT2G25000 | 50.000 | 62 | 29 | 1 | 132 | 193 | 124 | 183 | 3.14e-12 | 66.2 |
MS.gene81987.t1 | AT2G04880 | 49.153 | 59 | 27 | 1 | 132 | 190 | 282 | 337 | 3.47e-12 | 67.4 |
MS.gene81987.t1 | AT2G25000 | 50.000 | 62 | 29 | 1 | 132 | 193 | 145 | 204 | 3.63e-12 | 66.2 |
MS.gene81987.t1 | AT2G04880 | 49.153 | 59 | 27 | 1 | 132 | 190 | 306 | 361 | 4.22e-12 | 67.4 |
MS.gene81987.t1 | AT5G13080 | 44.000 | 75 | 39 | 1 | 132 | 206 | 66 | 137 | 5.72e-12 | 63.2 |
MS.gene81987.t1 | AT4G39410 | 49.153 | 59 | 27 | 1 | 132 | 190 | 222 | 277 | 6.81e-12 | 65.9 |
MS.gene81987.t1 | AT3G01970 | 50.000 | 60 | 27 | 1 | 132 | 191 | 64 | 120 | 7.85e-12 | 62.8 |
MS.gene81987.t1 | AT4G22070 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 8.40e-12 | 66.6 |
MS.gene81987.t1 | AT4G22070 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 8.40e-12 | 66.6 |
MS.gene81987.t1 | AT4G22070 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 8.40e-12 | 66.6 |
MS.gene81987.t1 | AT4G22070 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 8.40e-12 | 66.6 |
MS.gene81987.t1 | AT2G47260 | 48.333 | 60 | 28 | 1 | 132 | 191 | 173 | 229 | 1.13e-11 | 65.5 |
MS.gene81987.t1 | AT3G62340 | 50.000 | 60 | 27 | 1 | 132 | 191 | 117 | 173 | 1.55e-11 | 64.7 |
MS.gene81987.t1 | AT1G68150 | 43.038 | 79 | 42 | 2 | 132 | 209 | 234 | 310 | 1.78e-11 | 65.1 |
MS.gene81987.t1 | AT5G43290 | 49.180 | 61 | 28 | 1 | 130 | 190 | 111 | 168 | 2.01e-11 | 64.3 |
MS.gene81987.t1 | AT2G38470 | 47.458 | 59 | 28 | 1 | 132 | 190 | 361 | 416 | 2.49e-11 | 65.1 |
MS.gene81987.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 5.85e-11 | 64.3 |
MS.gene81987.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.00e-11 | 64.3 |
MS.gene81987.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.07e-11 | 64.3 |
MS.gene81987.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.07e-11 | 64.3 |
MS.gene81987.t1 | AT5G64810 | 40.299 | 67 | 37 | 1 | 132 | 198 | 109 | 172 | 6.40e-11 | 61.2 |
MS.gene81987.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.47e-11 | 64.3 |
MS.gene81987.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.47e-11 | 64.3 |
MS.gene81987.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.52e-11 | 64.3 |
MS.gene81987.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.65e-11 | 64.3 |
MS.gene81987.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.81e-11 | 64.3 |
MS.gene81987.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 371 | 454 | 7.89e-11 | 63.9 |
MS.gene81987.t1 | AT5G45050 | 50.877 | 57 | 26 | 1 | 134 | 190 | 1042 | 1096 | 8.87e-11 | 63.9 |
MS.gene81987.t1 | AT5G45050 | 50.877 | 57 | 26 | 1 | 134 | 190 | 1153 | 1207 | 9.26e-11 | 63.9 |
MS.gene81987.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 9.40e-11 | 63.9 |
MS.gene81987.t1 | AT5G45050 | 50.877 | 57 | 26 | 1 | 134 | 190 | 1181 | 1235 | 9.46e-11 | 63.9 |
MS.gene81987.t1 | AT5G15130 | 33.333 | 120 | 69 | 2 | 132 | 251 | 184 | 292 | 9.72e-11 | 63.2 |
MS.gene81987.t1 | AT5G15130 | 33.333 | 120 | 69 | 2 | 132 | 251 | 226 | 334 | 9.95e-11 | 63.2 |
Find 76 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAATCTCACTTGCCATATT+TGG | 0.088426 | 3.2:+76699070 | None:intergenic |
CAAATTTACATACCTCTTTC+TGG | 0.143241 | 3.2:+76699996 | None:intergenic |
CCGTAAAAGACATGTTAATA+TGG | 0.191166 | 3.2:-76700151 | MS.gene81987:CDS |
TTTGATCAATTTGAATTTGA+TGG | 0.254177 | 3.2:-76698995 | MS.gene81987:CDS |
TGTTAACAATATTTGTTTCT+TGG | 0.254224 | 3.2:+76699329 | None:intergenic |
TATGTTTCCCCTGCAAATTC+AGG | 0.272093 | 3.2:-76699133 | MS.gene81987:CDS |
ATGGAACAAATGATTGGTTT+AGG | 0.306745 | 3.2:+76699209 | None:intergenic |
AAACACACCAACTGCTTCTA+TGG | 0.316690 | 3.2:-76699026 | MS.gene81987:CDS |
AATCTCACGTGTTTCATTAG+AGG | 0.318717 | 3.2:+76700224 | None:intergenic |
GTTAACAATATTTGTTTCTT+GGG | 0.321184 | 3.2:+76699330 | None:intergenic |
ATGATTGGTTTAGGAAATCT+AGG | 0.323422 | 3.2:+76699218 | None:intergenic |
GGACCTTCCACTGCCATTCC+TGG | 0.341337 | 3.2:+76699669 | None:intergenic |
TGACTTATTCCTGAATTTGC+AGG | 0.343271 | 3.2:+76699124 | None:intergenic |
GGAACACTCTAGCAATTAGA+TGG | 0.350756 | 3.2:-76699713 | MS.gene81987:CDS |
TAATCTCACTTGCCATATTT+GGG | 0.350967 | 3.2:+76699071 | None:intergenic |
TTTGTTTCTTGGGTTTGAAA+TGG | 0.354628 | 3.2:+76699340 | None:intergenic |
TTTCAAATGGAACAAATGAT+TGG | 0.363750 | 3.2:+76699203 | None:intergenic |
GGGTATAGTTGGAGAAAATA+TGG | 0.366566 | 3.2:-76699636 | MS.gene81987:CDS |
ATTTGAAAAGGCACTTGAAA+TGG | 0.370230 | 3.2:-76700178 | MS.gene81987:CDS |
GCTTCCAATGTGGTTGGCCT+TGG | 0.391120 | 3.2:-76699379 | MS.gene81987:CDS |
TCAAATTCAAATTGATCAAA+TGG | 0.396441 | 3.2:+76698998 | None:intergenic |
TTCAAAAGTTGTTCATTTGG+TGG | 0.409814 | 3.2:+76699277 | None:intergenic |
CAAAGCTACTTTCAAGTACA+TGG | 0.413007 | 3.2:+76699179 | None:intergenic |
TTGTTCAAAAGTTGTTCATT+TGG | 0.416222 | 3.2:+76699274 | None:intergenic |
TGCAGTCATAGAAACGTTCT+AGG | 0.419203 | 3.2:-76699490 | MS.gene81987:CDS |
AGTTGTGGAATGTGAAGTTT+TGG | 0.442534 | 3.2:+76698972 | None:intergenic |
CTGAGGCTGAAGGGTATTGT+TGG | 0.449383 | 3.2:+76700115 | None:intergenic |
TATGTGATTTCAAAGATAGT+TGG | 0.452782 | 3.2:+76699427 | None:intergenic |
CGTAAAAGACATGTTAATAT+GGG | 0.457646 | 3.2:-76700150 | MS.gene81987:CDS |
TGAAATGGATTAGTTAATGT+TGG | 0.458156 | 3.2:+76699355 | None:intergenic |
CTCTTGATGATGGGTATAGT+TGG | 0.464883 | 3.2:-76699647 | MS.gene81987:CDS |
AAGGTGGCGAATCTGATATT+CGG | 0.465518 | 3.2:+76700079 | None:intergenic |
TTTGTTGATCAAGGCTTTGA+GGG | 0.467796 | 3.2:+76699302 | None:intergenic |
TTTGGGAAAACACTTGGAGT+TGG | 0.470835 | 3.2:+76699088 | None:intergenic |
AATTATATCCACATTTGAAA+AGG | 0.478087 | 3.2:-76700190 | MS.gene81987:CDS |
AGATAAGCTACTACAAGGAT+TGG | 0.478321 | 3.2:-76700289 | MS.gene81987:CDS |
GTGGAAGGTCCTCTTGATGA+TGG | 0.481430 | 3.2:-76699657 | MS.gene81987:CDS |
TTCTGGAAGCATTGTGATCA+CGG | 0.489343 | 3.2:+76700013 | None:intergenic |
ATGTGATTTCAAAGATAGTT+GGG | 0.493028 | 3.2:+76699428 | None:intergenic |
CAACAATACCCTTCAGCCTC+AGG | 0.495514 | 3.2:-76700114 | MS.gene81987:CDS |
GCCATATTTGGGAAAACACT+TGG | 0.500966 | 3.2:+76699082 | None:intergenic |
ATCACAATGCTTCCAGAAAG+AGG | 0.506811 | 3.2:-76700008 | MS.gene81987:intron |
GACTTATTCCTGAATTTGCA+GGG | 0.514420 | 3.2:+76699125 | None:intergenic |
ACCTTGGATGCACGGCTCCA+AGG | 0.515275 | 3.2:+76699601 | None:intergenic |
TCCTTGGAGCCGTGCATCCA+AGG | 0.519224 | 3.2:-76699602 | MS.gene81987:intron |
CTGTCGGAGTCTTCACTTCG+CGG | 0.524147 | 3.2:+76700045 | None:intergenic |
TTGTGCATGTGTGGTTTCCT+CGG | 0.524687 | 3.2:+76699404 | None:intergenic |
TATGGTCAGAAAGACATCCT+TGG | 0.530226 | 3.2:-76699618 | MS.gene81987:CDS |
GCAAGTGTTCCTGAGGCTGA+AGG | 0.534387 | 3.2:+76700105 | None:intergenic |
GTGTTTGCAGCAGAAGTAGC+TGG | 0.543085 | 3.2:+76699043 | None:intergenic |
CAAGTGTTCCTGAGGCTGAA+GGG | 0.573717 | 3.2:+76700106 | None:intergenic |
GCTACTACAAGGATTGGAGT+TGG | 0.576309 | 3.2:-76700283 | MS.gene81987:CDS |
AATTATATACCTTGGATGCA+CGG | 0.579367 | 3.2:+76699593 | None:intergenic |
TGGAAGGTCCTCTTGATGAT+GGG | 0.583275 | 3.2:-76699656 | MS.gene81987:CDS |
TATTCGAGTTGAACCAGGAA+TGG | 0.589228 | 3.2:-76699682 | MS.gene81987:CDS |
AGTTGAACCAGGAATGGCAG+TGG | 0.591297 | 3.2:-76699676 | MS.gene81987:CDS |
TTTGCAGGGGAAACATATGA+AGG | 0.596062 | 3.2:+76699139 | None:intergenic |
ATCACGGTTAAAATCTCTGT+CGG | 0.596477 | 3.2:+76700029 | None:intergenic |
GAACCAGGAATGGCAGTGGA+AGG | 0.596663 | 3.2:-76699672 | MS.gene81987:CDS |
TGGACCAAGGCCAACCACAT+TGG | 0.609791 | 3.2:+76699375 | None:intergenic |
ACAATTGCTTCCAATGTGGT+TGG | 0.610236 | 3.2:-76699385 | MS.gene81987:CDS |
TTAATAGATAAGCTACTACA+AGG | 0.612960 | 3.2:-76700294 | MS.gene81987:CDS |
AAACATATTCGAGTTGAACC+AGG | 0.613692 | 3.2:-76699687 | MS.gene81987:CDS |
GAACTCTTAGACCTGTTCGT+AGG | 0.617613 | 3.2:+76699251 | None:intergenic |
CTTCGCGGACTACAGCTCAA+AGG | 0.617709 | 3.2:+76700060 | None:intergenic |
CAACTATACCCATCATCAAG+AGG | 0.622097 | 3.2:+76699648 | None:intergenic |
GGAAACTCCATAGAAGCAGT+TGG | 0.622336 | 3.2:+76699019 | None:intergenic |
TGGAAGCAATTGTGCATGTG+TGG | 0.623042 | 3.2:+76699395 | None:intergenic |
TGGCGAATCTGATATTCGGA+TGG | 0.634201 | 3.2:+76700083 | None:intergenic |
ATCTTTGAAATCACATACCG+AGG | 0.643767 | 3.2:-76699421 | MS.gene81987:CDS |
CGCGGACTACAGCTCAAAGG+TGG | 0.645554 | 3.2:+76700063 | None:intergenic |
TCGGATGGCAAGTGTTCCTG+AGG | 0.646934 | 3.2:+76700098 | None:intergenic |
ACTTATTCCTGAATTTGCAG+GGG | 0.668793 | 3.2:+76699126 | None:intergenic |
GATTAGTTAATGTTGGACCA+AGG | 0.676942 | 3.2:+76699362 | None:intergenic |
ATGCACAATTGCTTCCAATG+TGG | 0.717502 | 3.2:-76699389 | MS.gene81987:CDS |
TTTGCAGCAGAAGTAGCTGG+TGG | 0.728180 | 3.2:+76699046 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATATTTATTTATTTT+AGG | - | chr3.2:76699533-76699552 | MS.gene81987:intron | 0.0% |
!! | AATTATATCCACATTTGAAA+AGG | - | chr3.2:76699077-76699096 | MS.gene81987:CDS | 20.0% |
!! | AATTGAGAAATTATATACCT+TGG | + | chr3.2:76699685-76699704 | None:intergenic | 20.0% |
!! | TAAATATAAAAACTAGGGTA+AGG | + | chr3.2:76699525-76699544 | None:intergenic | 20.0% |
!! | TCAAATTCAAATTGATCAAA+TGG | + | chr3.2:76700272-76700291 | None:intergenic | 20.0% |
!! | TTGTATTATTAAGAATAACC+CGG | + | chr3.2:76699456-76699475 | None:intergenic | 20.0% |
!! | TTTGATCAATTTGAATTTGA+TGG | - | chr3.2:76700272-76700291 | MS.gene81987:CDS | 20.0% |
!!! | AGTTTTTTTTTTAATACCGT+AGG | - | chr3.2:76699358-76699377 | MS.gene81987:CDS | 20.0% |
!!! | GTTAACAATATTTGTTTCTT+GGG | + | chr3.2:76699940-76699959 | None:intergenic | 20.0% |
!!! | GTTTTTTTTTTAATACCGTA+GGG | - | chr3.2:76699359-76699378 | MS.gene81987:CDS | 20.0% |
!!! | TGTTAACAATATTTGTTTCT+TGG | + | chr3.2:76699941-76699960 | None:intergenic | 20.0% |
! | ATGTGATTTCAAAGATAGTT+GGG | + | chr3.2:76699842-76699861 | None:intergenic | 25.0% |
! | CGTAAAAGACATGTTAATAT+GGG | - | chr3.2:76699117-76699136 | MS.gene81987:CDS | 25.0% |
! | TATGTGATTTCAAAGATAGT+TGG | + | chr3.2:76699843-76699862 | None:intergenic | 25.0% |
! | TGTATTATTAAGAATAACCC+GGG | + | chr3.2:76699455-76699474 | None:intergenic | 25.0% |
! | TTAATAGATAAGCTACTACA+AGG | - | chr3.2:76698973-76698992 | MS.gene81987:CDS | 25.0% |
! | TTGTTCAAAAGTTGTTCATT+TGG | + | chr3.2:76699996-76700015 | None:intergenic | 25.0% |
! | TTTCAAATGGAACAAATGAT+TGG | + | chr3.2:76700067-76700086 | None:intergenic | 25.0% |
!! | CAAATGTGGATATAATTTTC+TGG | + | chr3.2:76699074-76699093 | None:intergenic | 25.0% |
!! | CCATATTAACATGTCTTTTA+CGG | + | chr3.2:76699119-76699138 | None:intergenic | 25.0% |
!!! | TAAACTTTTTTTATACGACC+CGG | - | chr3.2:76699434-76699453 | MS.gene81987:CDS | 25.0% |
!!! | TGAAATGGATTAGTTAATGT+TGG | + | chr3.2:76699915-76699934 | None:intergenic | 25.0% |
AATTATATACCTTGGATGCA+CGG | + | chr3.2:76699677-76699696 | None:intergenic | 30.0% | |
ATAATCTCACTTGCCATATT+TGG | + | chr3.2:76700200-76700219 | None:intergenic | 30.0% | |
CAAATTTACATACCTCTTTC+TGG | + | chr3.2:76699274-76699293 | None:intergenic | 30.0% | |
CCGTAAAAGACATGTTAATA+TGG | - | chr3.2:76699116-76699135 | MS.gene81987:CDS | 30.0% | |
TAATCTCACTTGCCATATTT+GGG | + | chr3.2:76700199-76700218 | None:intergenic | 30.0% | |
TTCAAAAGTTGTTCATTTGG+TGG | + | chr3.2:76699993-76700012 | None:intergenic | 30.0% | |
! | TCAAGTACATGGTTTTCAAA+TGG | + | chr3.2:76700080-76700099 | None:intergenic | 30.0% |
! | TTTGTTTCTTGGGTTTGAAA+TGG | + | chr3.2:76699930-76699949 | None:intergenic | 30.0% |
!! | ATGATTGGTTTAGGAAATCT+AGG | + | chr3.2:76700052-76700071 | None:intergenic | 30.0% |
!! | ATGGAACAAATGATTGGTTT+AGG | + | chr3.2:76700061-76700080 | None:intergenic | 30.0% |
!! | ATTTGAAAAGGCACTTGAAA+TGG | - | chr3.2:76699089-76699108 | MS.gene81987:CDS | 30.0% |
!!! | AAACTTTTTTTATACGACCC+GGG | - | chr3.2:76699435-76699454 | MS.gene81987:CDS | 30.0% |
AAGAGAAAAATCGTGAGTTG+TGG | + | chr3.2:76700313-76700332 | None:intergenic | 35.0% | |
AATCTCACGTGTTTCATTAG+AGG | + | chr3.2:76699046-76699065 | None:intergenic | 35.0% | |
ACTTATTCCTGAATTTGCAG+GGG | + | chr3.2:76700144-76700163 | None:intergenic | 35.0% | |
AGATAAGCTACTACAAGGAT+TGG | - | chr3.2:76698978-76698997 | MS.gene81987:CDS | 35.0% | |
ATCACGGTTAAAATCTCTGT+CGG | + | chr3.2:76699241-76699260 | None:intergenic | 35.0% | |
GACTTATTCCTGAATTTGCA+GGG | + | chr3.2:76700145-76700164 | None:intergenic | 35.0% | |
GGGTATAGTTGGAGAAAATA+TGG | - | chr3.2:76699631-76699650 | MS.gene81987:CDS | 35.0% | |
TGACTTATTCCTGAATTTGC+AGG | + | chr3.2:76700146-76700165 | None:intergenic | 35.0% | |
! | AGTTGTGGAATGTGAAGTTT+TGG | + | chr3.2:76700298-76700317 | None:intergenic | 35.0% |
! | CAAAGCTACTTTCAAGTACA+TGG | + | chr3.2:76700091-76700110 | None:intergenic | 35.0% |
! | GATTAGTTAATGTTGGACCA+AGG | + | chr3.2:76699908-76699927 | None:intergenic | 35.0% |
! | TCCAAGTGTTTTCCCAAATA+TGG | - | chr3.2:76700184-76700203 | MS.gene81987:CDS | 35.0% |
! | TTCAAGTGCCTTTTCAAATG+TGG | + | chr3.2:76699088-76699107 | None:intergenic | 35.0% |
! | TTTGTTGATCAAGGCTTTGA+GGG | + | chr3.2:76699968-76699987 | None:intergenic | 35.0% |
! | TTTTGTTGATCAAGGCTTTG+AGG | + | chr3.2:76699969-76699988 | None:intergenic | 35.0% |
!! | AAACATATTCGAGTTGAACC+AGG | - | chr3.2:76699580-76699599 | MS.gene81987:intron | 35.0% |
!! | ATCTTTGAAATCACATACCG+AGG | - | chr3.2:76699846-76699865 | MS.gene81987:intron | 35.0% |
!! | TTGGTGGTTTTTGTTGATCA+AGG | + | chr3.2:76699977-76699996 | None:intergenic | 35.0% |
AAACACACCAACTGCTTCTA+TGG | - | chr3.2:76700241-76700260 | MS.gene81987:CDS | 40.0% | |
AAGGTGGCGAATCTGATATT+CGG | + | chr3.2:76699191-76699210 | None:intergenic | 40.0% | |
AATATGGCGAGTGATCTGAA+TGG | - | chr3.2:76699393-76699412 | MS.gene81987:CDS | 40.0% | |
ACAATTGCTTCCAATGTGGT+TGG | - | chr3.2:76699882-76699901 | MS.gene81987:intron | 40.0% | |
ATATGGCGAGTGATCTGAAT+GGG | - | chr3.2:76699394-76699413 | MS.gene81987:CDS | 40.0% | |
ATCACAATGCTTCCAGAAAG+AGG | - | chr3.2:76699259-76699278 | MS.gene81987:CDS | 40.0% | |
ATGCACAATTGCTTCCAATG+TGG | - | chr3.2:76699878-76699897 | MS.gene81987:intron | 40.0% | |
CAACTATACCCATCATCAAG+AGG | + | chr3.2:76699622-76699641 | None:intergenic | 40.0% | |
GCCATATTTGGGAAAACACT+TGG | + | chr3.2:76700188-76700207 | None:intergenic | 40.0% | |
GGAACACTCTAGCAATTAGA+TGG | - | chr3.2:76699554-76699573 | MS.gene81987:intron | 40.0% | |
TAGGGTGCGCATAGATAATA+TGG | - | chr3.2:76699377-76699396 | MS.gene81987:CDS | 40.0% | |
TATGGTCAGAAAGACATCCT+TGG | - | chr3.2:76699649-76699668 | MS.gene81987:CDS | 40.0% | |
TATGTTTCCCCTGCAAATTC+AGG | - | chr3.2:76700134-76700153 | MS.gene81987:CDS | 40.0% | |
TATTATCTATGCGCACCCTA+CGG | + | chr3.2:76699377-76699396 | None:intergenic | 40.0% | |
TGCAGTCATAGAAACGTTCT+AGG | - | chr3.2:76699777-76699796 | MS.gene81987:intron | 40.0% | |
TTGTCGAGAAAACTCTCGTT+AGG | - | chr3.2:76699327-76699346 | MS.gene81987:CDS | 40.0% | |
TTTGCAGGGGAAACATATGA+AGG | + | chr3.2:76700131-76700150 | None:intergenic | 40.0% | |
TTTGGGAAAACACTTGGAGT+TGG | + | chr3.2:76700182-76700201 | None:intergenic | 40.0% | |
! | CTTTTGAACAACCTACGAAC+AGG | - | chr3.2:76700005-76700024 | MS.gene81987:intron | 40.0% |
! | TTTTGTGTGTGTGTATGCAG+AGG | - | chr3.2:76699744-76699763 | MS.gene81987:intron | 40.0% |
!! | CTCTTGATGATGGGTATAGT+TGG | - | chr3.2:76699620-76699639 | MS.gene81987:CDS | 40.0% |
!! | TATTCGAGTTGAACCAGGAA+TGG | - | chr3.2:76699585-76699604 | MS.gene81987:intron | 40.0% |
!! | TTCTGGAAGCATTGTGATCA+CGG | + | chr3.2:76699257-76699276 | None:intergenic | 40.0% |
GAACTCTTAGACCTGTTCGT+AGG | + | chr3.2:76700019-76700038 | None:intergenic | 45.0% | |
GCTACTACAAGGATTGGAGT+TGG | - | chr3.2:76698984-76699003 | MS.gene81987:CDS | 45.0% | |
GGAAACTCCATAGAAGCAGT+TGG | + | chr3.2:76700251-76700270 | None:intergenic | 45.0% | |
TGGAAGCAATTGTGCATGTG+TGG | + | chr3.2:76699875-76699894 | None:intergenic | 45.0% | |
TGGCGAATCTGATATTCGGA+TGG | + | chr3.2:76699187-76699206 | None:intergenic | 45.0% | |
TTGTGCATGTGTGGTTTCCT+CGG | + | chr3.2:76699866-76699885 | None:intergenic | 45.0% | |
! | TGGAAGGTCCTCTTGATGAT+GGG | - | chr3.2:76699611-76699630 | MS.gene81987:CDS | 45.0% |
!! | AATAAATAAATATAAAAACT+AGG | + | chr3.2:76699531-76699550 | None:intergenic | 5.0% |
!! | ATAAATAAATATAAAAACTA+GGG | + | chr3.2:76699530-76699549 | None:intergenic | 5.0% |
AGTTGAACCAGGAATGGCAG+TGG | - | chr3.2:76699591-76699610 | MS.gene81987:intron | 50.0% | |
CAACAATACCCTTCAGCCTC+AGG | - | chr3.2:76699153-76699172 | MS.gene81987:CDS | 50.0% | |
CAAGTGTTCCTGAGGCTGAA+GGG | + | chr3.2:76699164-76699183 | None:intergenic | 50.0% | |
GTGGAAGGTCCTCTTGATGA+TGG | - | chr3.2:76699610-76699629 | MS.gene81987:CDS | 50.0% | |
GTGTTTGCAGCAGAAGTAGC+TGG | + | chr3.2:76700227-76700246 | None:intergenic | 50.0% | |
TTTGCAGCAGAAGTAGCTGG+TGG | + | chr3.2:76700224-76700243 | None:intergenic | 50.0% | |
!! | CTGAGGCTGAAGGGTATTGT+TGG | + | chr3.2:76699155-76699174 | None:intergenic | 50.0% |
CTGTCGGAGTCTTCACTTCG+CGG | + | chr3.2:76699225-76699244 | None:intergenic | 55.0% | |
GAACCAGGAATGGCAGTGGA+AGG | - | chr3.2:76699595-76699614 | MS.gene81987:intron | 55.0% | |
GCAAGTGTTCCTGAGGCTGA+AGG | + | chr3.2:76699165-76699184 | None:intergenic | 55.0% | |
TCGGATGGCAAGTGTTCCTG+AGG | + | chr3.2:76699172-76699191 | None:intergenic | 55.0% | |
TGGACCAAGGCCAACCACAT+TGG | + | chr3.2:76699895-76699914 | None:intergenic | 55.0% | |
! | CTTCGCGGACTACAGCTCAA+AGG | + | chr3.2:76699210-76699229 | None:intergenic | 55.0% |
!! | GCTTCCAATGTGGTTGGCCT+TGG | - | chr3.2:76699888-76699907 | MS.gene81987:intron | 55.0% |
ACCTTGGATGCACGGCTCCA+AGG | + | chr3.2:76699669-76699688 | None:intergenic | 60.0% | |
GGACCTTCCACTGCCATTCC+TGG | + | chr3.2:76699601-76699620 | None:intergenic | 60.0% | |
TCCTTGGAGCCGTGCATCCA+AGG | - | chr3.2:76699665-76699684 | MS.gene81987:CDS | 60.0% | |
! | CGCGGACTACAGCTCAAAGG+TGG | + | chr3.2:76699207-76699226 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 76698955 | 76700334 | 76698955 | ID=MS.gene81987 |
chr3.2 | mRNA | 76698955 | 76700334 | 76698955 | ID=MS.gene81987.t1;Parent=MS.gene81987 |
chr3.2 | exon | 76700009 | 76700334 | 76700009 | ID=MS.gene81987.t1.exon1;Parent=MS.gene81987.t1 |
chr3.2 | CDS | 76700009 | 76700334 | 76700009 | ID=cds.MS.gene81987.t1;Parent=MS.gene81987.t1 |
chr3.2 | exon | 76699603 | 76699734 | 76699603 | ID=MS.gene81987.t1.exon2;Parent=MS.gene81987.t1 |
chr3.2 | CDS | 76699603 | 76699734 | 76699603 | ID=cds.MS.gene81987.t1;Parent=MS.gene81987.t1 |
chr3.2 | exon | 76698955 | 76699525 | 76698955 | ID=MS.gene81987.t1.exon3;Parent=MS.gene81987.t1 |
chr3.2 | CDS | 76698955 | 76699525 | 76698955 | ID=cds.MS.gene81987.t1;Parent=MS.gene81987.t1 |
Gene Sequence |
Protein sequence |