Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82295.t1 | XP_003599126.2 | 99.7 | 346 | 1 | 0 | 1 | 346 | 1 | 346 | 4.00E-190 | 674.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82295.t1 | E0X9N4 | 66.5 | 346 | 110 | 2 | 1 | 346 | 1 | 340 | 3.8e-120 | 433.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82295.t1 | G7IWL8 | 99.7 | 346 | 1 | 0 | 1 | 346 | 1 | 346 | 2.9e-190 | 674.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene82295.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82295.t1 | MTR_3g028190 | 99.711 | 346 | 1 | 0 | 1 | 346 | 1 | 346 | 0.0 | 723 |
| MS.gene82295.t1 | MTR_3g028170 | 52.599 | 327 | 130 | 7 | 1 | 322 | 1 | 307 | 1.03e-100 | 308 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82295.t1 | AT3G08505 | 63.295 | 346 | 93 | 3 | 1 | 346 | 1 | 312 | 4.84e-160 | 453 |
| MS.gene82295.t1 | AT3G08505 | 63.295 | 346 | 93 | 3 | 1 | 346 | 1 | 312 | 4.84e-160 | 453 |
| MS.gene82295.t1 | AT3G08505 | 63.295 | 346 | 93 | 3 | 1 | 346 | 1 | 312 | 4.84e-160 | 453 |
Find 92 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGATGTCTTTGGCAATTA+TGG | 0.200868 | 3.4:-22080630 | None:intergenic |
| TCCATCTACCTCTTCTTCTT+TGG | 0.242762 | 3.4:-22081454 | None:intergenic |
| TTACTTGAGCTTTGCCTTGT+AGG | 0.248432 | 3.4:-22078936 | None:intergenic |
| CAGAAAGGAGTTTGTGCTTA+TGG | 0.262469 | 3.4:+22078191 | MS.gene82295:CDS |
| GACAATGCTTGCATCCTTTC+CGG | 0.265577 | 3.4:+22078579 | MS.gene82295:CDS |
| GCGTATCGTGTATTAGAAAT+TGG | 0.271742 | 3.4:+22078774 | MS.gene82295:CDS |
| ATTGTATCACCAACATTATT+CGG | 0.326526 | 3.4:-22078064 | None:intergenic |
| AGGTAGCTTTGCGTCATCTT+GGG | 0.329256 | 3.4:+22080591 | MS.gene82295:CDS |
| TTGTCGTTCCAAGTGTTATT+TGG | 0.331364 | 3.4:+22078876 | MS.gene82295:CDS |
| CGTAGTAGTAACCCAACATT+AGG | 0.336048 | 3.4:+22078797 | MS.gene82295:CDS |
| TTGTGCAGATTCTTGATTCC+AGG | 0.338822 | 3.4:-22078408 | None:intergenic |
| GAGGTAGCTTTGCGTCATCT+TGG | 0.340448 | 3.4:+22080590 | MS.gene82295:CDS |
| ATTTGTTCATTTGCTGCTGC+TGG | 0.363377 | 3.4:+22078494 | MS.gene82295:CDS |
| CTTTGTAAGTTCTTTGCTCA+TGG | 0.382149 | 3.4:+22077989 | MS.gene82295:CDS |
| ATATGTTCTTCTCTTTCTTC+AGG | 0.386226 | 3.4:-22078602 | None:intergenic |
| TTGATTCCAGGCTTGTTCAC+TGG | 0.388041 | 3.4:-22078396 | None:intergenic |
| GGCGAAGGAAACTGCCCTTT+CGG | 0.397193 | 3.4:+22079586 | MS.gene82295:CDS |
| CTCAACATTAACCAACACTT+TGG | 0.407368 | 3.4:-22081427 | None:intergenic |
| GGATGTTAATAGCACATTGC+GGG | 0.414993 | 3.4:+22078823 | MS.gene82295:CDS |
| AGAGAGAAACCTGATGTCTT+TGG | 0.415002 | 3.4:-22080639 | None:intergenic |
| TGATTCCAGGCTTGTTCACT+GGG | 0.416070 | 3.4:-22078395 | None:intergenic |
| TTCTTCCCAGTGAACAAGCC+TGG | 0.423135 | 3.4:+22078390 | MS.gene82295:CDS |
| GTTTCAGAATCGGCTGTACT+TGG | 0.435930 | 3.4:+22078299 | MS.gene82295:CDS |
| ACGGCAGCTGAGCGTAAGTT+TGG | 0.437819 | 3.4:+22078722 | MS.gene82295:CDS |
| CTGCACAACTTGACTTCCTA+AGG | 0.447330 | 3.4:+22078423 | MS.gene82295:CDS |
| GTGCTTATGGTAGTCGCTGC+AGG | 0.448946 | 3.4:+22078204 | MS.gene82295:CDS |
| CTCATGGAGCGTGTCTGAAA+GGG | 0.457791 | 3.4:+22078005 | MS.gene82295:CDS |
| TGAAACAAGGGGCTGGTGTT+CGG | 0.458109 | 3.4:-22078282 | None:intergenic |
| GGTTGAAGATGAGAAATTTG+AGG | 0.461714 | 3.4:+22081389 | MS.gene82295:CDS |
| TAACATCCATCCCTAATGTT+GGG | 0.466091 | 3.4:-22078808 | None:intergenic |
| CCAGCCCCTTGTTTCAGAAT+CGG | 0.469602 | 3.4:+22078289 | MS.gene82295:CDS |
| CGTCATCTTGGGGCTGCAGA+TGG | 0.471622 | 3.4:+22080602 | MS.gene82295:CDS |
| TGTTCGGTTATTGAAGAAGA+TGG | 0.473750 | 3.4:-22078266 | None:intergenic |
| GGAAGATGATGTTGTTCAAT+CGG | 0.474976 | 3.4:+22078445 | MS.gene82295:CDS |
| CCATAATTGCCAAAGACATC+AGG | 0.475198 | 3.4:+22080630 | MS.gene82295:CDS |
| TCCAAAGAAGAAGAGGTAGA+TGG | 0.481149 | 3.4:+22081453 | MS.gene82295:CDS |
| GAACAACATCATCTTCCCTT+AGG | 0.486955 | 3.4:-22078439 | None:intergenic |
| TTAACATCCATCCCTAATGT+TGG | 0.488690 | 3.4:-22078809 | None:intergenic |
| TAAGATAGCTTGCGACAGAT+AGG | 0.489220 | 3.4:-22078851 | None:intergenic |
| CGGTACTAGCTGCTTCTACA+AGG | 0.489509 | 3.4:+22079606 | MS.gene82295:CDS |
| GCAGCAGCAAATGAACAAAT+CGG | 0.492646 | 3.4:-22078491 | None:intergenic |
| GATGAGAAATTTGAGGAGAA+TGG | 0.495692 | 3.4:+22081396 | MS.gene82295:CDS |
| GCTCATGGAGCGTGTCTGAA+AGG | 0.521682 | 3.4:+22078004 | MS.gene82295:CDS |
| TCTCTTTCTTCAGGCCGGAA+AGG | 0.522386 | 3.4:-22078593 | None:intergenic |
| CAACACCATTCGATGTAACT+CGG | 0.526387 | 3.4:-22078328 | None:intergenic |
| GTTCTTCTCTTTCTTCAGGC+CGG | 0.528004 | 3.4:-22078598 | None:intergenic |
| GAACAAATCGGAAGCTCAGA+AGG | 0.538088 | 3.4:-22078479 | None:intergenic |
| TACAGCCGATTCTGAAACAA+GGG | 0.542302 | 3.4:-22078294 | None:intergenic |
| GAACAATGTCCTCATGTACA+TGG | 0.543220 | 3.4:+22078533 | MS.gene82295:CDS |
| AGAAGCAGCTAGTACCGAAA+GGG | 0.547432 | 3.4:-22079600 | None:intergenic |
| TGAGTTGTCCAAAGAAGAAG+AGG | 0.547773 | 3.4:+22081446 | MS.gene82295:CDS |
| GTAGTAGTAACCCAACATTA+GGG | 0.548465 | 3.4:+22078798 | MS.gene82295:CDS |
| GCGTGTTCTTTCAAAGCCTA+CGG | 0.552472 | 3.4:+22078703 | MS.gene82295:CDS |
| GGTAGCTTTGCGTCATCTTG+GGG | 0.557694 | 3.4:+22080592 | MS.gene82295:CDS |
| TGTTCACTGGGAAGAACAAA+GGG | 0.561359 | 3.4:-22078383 | None:intergenic |
| GGAAATGCATCACTTGATAA+CGG | 0.563388 | 3.4:+22081474 | MS.gene82295:CDS |
| CCGATTCTGAAACAAGGGGC+TGG | 0.563910 | 3.4:-22078289 | None:intergenic |
| TATCACCAACATTATTCGGA+GGG | 0.577334 | 3.4:-22078060 | None:intergenic |
| ATATCGTGATGGCCGTCTTG+AGG | 0.591471 | 3.4:+22080568 | MS.gene82295:CDS |
| CAAGCATTGTCTTCCACATG+AGG | 0.592492 | 3.4:-22078567 | None:intergenic |
| TTGTTCACTGGGAAGAACAA+AGG | 0.593124 | 3.4:-22078384 | None:intergenic |
| ATCACCAACATTATTCGGAG+GGG | 0.593920 | 3.4:-22078059 | None:intergenic |
| TAGTAACCCAACATTAGGGA+TGG | 0.597655 | 3.4:+22078802 | MS.gene82295:CDS |
| AATACCCGAGTTACATCGAA+TGG | 0.599856 | 3.4:+22078323 | MS.gene82295:CDS |
| TATTGAAGAAGATGGAGTAG+AGG | 0.608961 | 3.4:-22078258 | None:intergenic |
| GTAGCATACCAAATAACACT+TGG | 0.613633 | 3.4:-22078884 | None:intergenic |
| AAGCATTGTCTTCCACATGA+GGG | 0.614385 | 3.4:-22078566 | None:intergenic |
| TCGTGATGGCCGTCTTGAGG+AGG | 0.617371 | 3.4:+22080571 | MS.gene82295:CDS |
| AACACCATTCGATGTAACTC+GGG | 0.620122 | 3.4:-22078327 | None:intergenic |
| TAGAAGCAGCTAGTACCGAA+AGG | 0.624207 | 3.4:-22079601 | None:intergenic |
| GGAGATTTATGCCCCTCATG+TGG | 0.626843 | 3.4:+22078554 | MS.gene82295:CDS |
| AGCATTGTCTTCCACATGAG+GGG | 0.631001 | 3.4:-22078565 | None:intergenic |
| GGAAATCATTGATACCTACA+AGG | 0.631452 | 3.4:+22078922 | MS.gene82295:CDS |
| ATAATTTCGCCATGTCAAAG+AGG | 0.631521 | 3.4:+22076940 | None:intergenic |
| AACTTACGCTCAGCTGCCGT+AGG | 0.632534 | 3.4:-22078719 | None:intergenic |
| TGCACAACTTGACTTCCTAA+GGG | 0.633433 | 3.4:+22078424 | MS.gene82295:CDS |
| AAATAAGCAAAAGCATCTTG+AGG | 0.635288 | 3.4:+22078637 | MS.gene82295:CDS |
| GTATCACCAACATTATTCGG+AGG | 0.636921 | 3.4:-22078061 | None:intergenic |
| TGAGGACATTGTTCCCCTCG+TGG | 0.637218 | 3.4:-22078524 | None:intergenic |
| GTACAGCCGATTCTGAAACA+AGG | 0.638170 | 3.4:-22078295 | None:intergenic |
| CTGCTGGAAACTGTCCACGA+GGG | 0.638932 | 3.4:+22078510 | MS.gene82295:CDS |
| TGCTGGAAACTGTCCACGAG+GGG | 0.639094 | 3.4:+22078511 | MS.gene82295:CDS |
| CATAAATCTCCATGTACATG+AGG | 0.639832 | 3.4:-22078542 | None:intergenic |
| CTAATACACGATACGCAGAA+CGG | 0.640856 | 3.4:-22078767 | None:intergenic |
| TCTATCTTACCTCTTTGACA+TGG | 0.646375 | 3.4:-22076949 | None:intergenic |
| TCATGGAGCGTGTCTGAAAG+GGG | 0.647946 | 3.4:+22078006 | MS.gene82295:CDS |
| TTGCAGCATGCATATCGTGA+TGG | 0.670081 | 3.4:+22080557 | MS.gene82295:intron |
| GCTGCTGGAAACTGTCCACG+AGG | 0.694625 | 3.4:+22078509 | MS.gene82295:CDS |
| TGGATGTTAATAGCACATTG+CGG | 0.695653 | 3.4:+22078822 | MS.gene82295:CDS |
| GCTTTGAAAGAACACGCTCG+AGG | 0.700611 | 3.4:-22078697 | None:intergenic |
| ACAGCCGATTCTGAAACAAG+GGG | 0.720447 | 3.4:-22078293 | None:intergenic |
| GCAAAGCTACCTCCTCAAGA+CGG | 0.724386 | 3.4:-22080580 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTAAAAAAAAAAAAT+TGG | - | chr3.4:22079924-22079943 | None:intergenic | 0.0% |
| !!! | TATTTTAAAAAAAAAAAATT+GGG | - | chr3.4:22079923-22079942 | None:intergenic | 0.0% |
| !! | ATGCAAAAAAAATTAAATTA+TGG | - | chr3.4:22080135-22080154 | None:intergenic | 10.0% |
| !! | TGCAAAAAAAATTAAATTAT+GGG | - | chr3.4:22080134-22080153 | None:intergenic | 10.0% |
| !!! | AAGTAGATTTTTTTTTTTTT+TGG | + | chr3.4:22077163-22077182 | MS.gene82295:intron | 10.0% |
| !!! | ATTCTTGATTATTTTTAATA+TGG | + | chr3.4:22077024-22077043 | MS.gene82295:intron | 10.0% |
| !!! | TTCTTGATTATTTTTAATAT+GGG | + | chr3.4:22077025-22077044 | MS.gene82295:intron | 10.0% |
| !!! | TTTTTTTTTTTTTGGATTAT+TGG | + | chr3.4:22077171-22077190 | MS.gene82295:intron | 10.0% |
| !! | AAATTACATAAATTACACTT+TGG | - | chr3.4:22080064-22080083 | None:intergenic | 15.0% |
| !! | AAGTATAACATAAACTAATT+AGG | - | chr3.4:22080535-22080554 | None:intergenic | 15.0% |
| !! | TTTATGTAATTAATTGTCTT+TGG | + | chr3.4:22077952-22077971 | MS.gene82295:intron | 15.0% |
| !!! | ACTTGTGTAATTTTTTTTTT+CGG | + | chr3.4:22080107-22080126 | MS.gene82295:intron | 15.0% |
| !!! | ATATTTAAGACACTAAATAA+TGG | + | chr3.4:22079940-22079959 | MS.gene82295:intron | 15.0% |
| !!! | TCTTGATTATTTTTAATATG+GGG | + | chr3.4:22077026-22077045 | MS.gene82295:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGCAAGTT+CGG | + | chr3.4:22077395-22077414 | MS.gene82295:intron | 15.0% |
| !! | AAATCATGAAATTAATGCAA+AGG | - | chr3.4:22080828-22080847 | None:intergenic | 20.0% |
| !! | AAGTTCGGTAAATAATTATT+CGG | + | chr3.4:22077410-22077429 | MS.gene82295:intron | 20.0% |
| !! | ATAACTCAATAACCATAAAT+CGG | - | chr3.4:22078112-22078131 | None:intergenic | 20.0% |
| !! | ATGCTGAATAAGTTATTATA+AGG | + | chr3.4:22079073-22079092 | MS.gene82295:intron | 20.0% |
| !! | CAATATAATTGAGTGAAATA+GGG | - | chr3.4:22081156-22081175 | None:intergenic | 20.0% |
| !! | TCAATATAATTGAGTGAAAT+AGG | - | chr3.4:22081157-22081176 | None:intergenic | 20.0% |
| !! | TGCTGAATAAGTTATTATAA+GGG | + | chr3.4:22079074-22079093 | MS.gene82295:intron | 20.0% |
| !! | TTATATCTGAGTTTATATAC+TGG | - | chr3.4:22079460-22079479 | None:intergenic | 20.0% |
| !! | TTGATTATAACTCAGAAATT+AGG | + | chr3.4:22077126-22077145 | MS.gene82295:intron | 20.0% |
| !!! | AAAAAGTCTCTAGAATAAAA+AGG | - | chr3.4:22077765-22077784 | None:intergenic | 20.0% |
| !!! | AAAAGTCTCTAGAATAAAAA+GGG | - | chr3.4:22077764-22077783 | None:intergenic | 20.0% |
| !!! | AAGCTTTTTTTATTTTTCTG+AGG | - | chr3.4:22081046-22081065 | None:intergenic | 20.0% |
| !!! | AATAAGCTAAAAACAACTTT+TGG | + | chr3.4:22079371-22079390 | MS.gene82295:intron | 20.0% |
| !!! | AATTTGATATTTTTCCTATC+TGG | + | chr3.4:22077314-22077333 | MS.gene82295:intron | 20.0% |
| !!! | ACTATTATGTTGCTTATATT+AGG | - | chr3.4:22079178-22079197 | None:intergenic | 20.0% |
| !!! | AGCTTTTTTTATTTTTCTGA+GGG | - | chr3.4:22081045-22081064 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAT+AGG | - | chr3.4:22079213-22079232 | None:intergenic | 20.0% |
| !!! | ATTTGATATTTTTCCTATCT+GGG | + | chr3.4:22077315-22077334 | MS.gene82295:intron | 20.0% |
| !!! | CTTGTGTAATTTTTTTTTTC+GGG | + | chr3.4:22080108-22080127 | MS.gene82295:intron | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+GGG | - | chr3.4:22079212-22079231 | None:intergenic | 20.0% |
| !!! | TTATAGCTTTTGAATTTTCA+CGG | + | chr3.4:22077626-22077645 | MS.gene82295:intron | 20.0% |
| !!! | TTCATGATTTCTTTTGTATA+TGG | + | chr3.4:22080838-22080857 | MS.gene82295:intron | 20.0% |
| !!! | TTTATTCTAGAGACTTTTTA+AGG | + | chr3.4:22077766-22077785 | MS.gene82295:intron | 20.0% |
| !!! | TTTTGCTGAAATGTTTATTT+TGG | + | chr3.4:22079512-22079531 | MS.gene82295:intron | 20.0% |
| ! | AAACATCATAATTAAACGCT+AGG | - | chr3.4:22080457-22080476 | None:intergenic | 25.0% |
| ! | AAACTGAATTTAGTACACTT+TGG | - | chr3.4:22079771-22079790 | None:intergenic | 25.0% |
| ! | AAGACATAAATAGATGTTGT+GGG | - | chr3.4:22078973-22078992 | None:intergenic | 25.0% |
| ! | AATTCAAAAGCTATAAAGAG+TGG | - | chr3.4:22077622-22077641 | None:intergenic | 25.0% |
| ! | ACAATATACTAGGGAAATAA+AGG | + | chr3.4:22081281-22081300 | MS.gene82295:intron | 25.0% |
| ! | ATAACTTATTCAGCATAGTA+TGG | - | chr3.4:22079069-22079088 | None:intergenic | 25.0% |
| ! | ATACAATTTCACCCTAAAAA+GGG | + | chr3.4:22081355-22081374 | MS.gene82295:intron | 25.0% |
| ! | ATCCCTTATAAAACTAAAAC+GGG | + | chr3.4:22080153-22080172 | MS.gene82295:intron | 25.0% |
| ! | ATGATATAGCTTATTGAAGT+AGG | + | chr3.4:22077436-22077455 | MS.gene82295:intron | 25.0% |
| ! | ATGTATTAAGTTCGTGAAAT+TGG | - | chr3.4:22080712-22080731 | None:intergenic | 25.0% |
| ! | ATTGTATCACCAACATTATT+CGG | - | chr3.4:22078067-22078086 | None:intergenic | 25.0% |
| ! | ATTTGTTCAATACCATTTGT+AGG | + | chr3.4:22079536-22079555 | MS.gene82295:intron | 25.0% |
| ! | CATCCCTTATAAAACTAAAA+CGG | + | chr3.4:22080152-22080171 | MS.gene82295:intron | 25.0% |
| ! | GCATGATTAAAATGAATTCA+TGG | - | chr3.4:22077829-22077848 | None:intergenic | 25.0% |
| ! | GCTGAATAAGTTATTATAAG+GGG | + | chr3.4:22079075-22079094 | MS.gene82295:intron | 25.0% |
| ! | TACATAAATTACACTTTGGT+GGG | - | chr3.4:22080060-22080079 | None:intergenic | 25.0% |
| ! | TATACAATTTCACCCTAAAA+AGG | + | chr3.4:22081354-22081373 | MS.gene82295:intron | 25.0% |
| ! | TATGCATATGTTTATTTGAG+CGG | + | chr3.4:22077553-22077572 | MS.gene82295:intron | 25.0% |
| ! | TGCGAATCTTAAATATACTT+GGG | - | chr3.4:22080411-22080430 | None:intergenic | 25.0% |
| ! | TTACATAAATTACACTTTGG+TGG | - | chr3.4:22080061-22080080 | None:intergenic | 25.0% |
| ! | TTATTAGATCATGGATCAAT+TGG | - | chr3.4:22079012-22079031 | None:intergenic | 25.0% |
| ! | TTGATTGGAATTCAGAAATT+AGG | + | chr3.4:22077346-22077365 | MS.gene82295:intron | 25.0% |
| ! | TTGCGAATCTTAAATATACT+TGG | - | chr3.4:22080412-22080431 | None:intergenic | 25.0% |
| !! | AGACAATTGAAATTTGTTCA+CGG | - | chr3.4:22079795-22079814 | None:intergenic | 25.0% |
| !! | ATATGCACATTTTATCAGAA+AGG | + | chr3.4:22078176-22078195 | MS.gene82295:CDS | 25.0% |
| !! | CTATACGATAAGTAAAGTTT+TGG | - | chr3.4:22079669-22079688 | None:intergenic | 25.0% |
| !! | CTTTGGTTTCTATATGAAAA+AGG | - | chr3.4:22079754-22079773 | None:intergenic | 25.0% |
| !! | TTTCCCTAGTATATTGTTTT+AGG | - | chr3.4:22081278-22081297 | None:intergenic | 25.0% |
| !! | TTTGAAGTTGGAATTCAATT+AGG | + | chr3.4:22077201-22077220 | MS.gene82295:intron | 25.0% |
| !!! | AAAGTCTCTAGAATAAAAAG+GGG | - | chr3.4:22077763-22077782 | None:intergenic | 25.0% |
| !!! | ATTGGATAAGTTTTTGAAGT+TGG | + | chr3.4:22077189-22077208 | MS.gene82295:intron | 25.0% |
| !!! | CAATGAAGTTGATTGTTTTA+CGG | + | chr3.4:22081497-22081516 | MS.gene82295:CDS | 25.0% |
| !!! | GCTTTTTTTATTTTTCTGAG+GGG | - | chr3.4:22081044-22081063 | None:intergenic | 25.0% |
| !!! | GTTTCGTTTTTATTAGATCA+TGG | - | chr3.4:22079021-22079040 | None:intergenic | 25.0% |
| AACTTAAATGCATGTTAGCA+AGG | - | chr3.4:22080758-22080777 | None:intergenic | 30.0% | |
| AAGTTCGTGAAATTGGAAAA+TGG | - | chr3.4:22080705-22080724 | None:intergenic | 30.0% | |
| AGAATTGAAGTTGCGTAATT+TGG | + | chr3.4:22081073-22081092 | MS.gene82295:intron | 30.0% | |
| AGAGCCTAAAACAATATACT+AGG | + | chr3.4:22081271-22081290 | MS.gene82295:intron | 30.0% | |
| AGAGTTGTAACACTACTTTA+TGG | - | chr3.4:22081309-22081328 | None:intergenic | 30.0% | |
| ATATGTTCTTCTCTTTCTTC+AGG | - | chr3.4:22078605-22078624 | None:intergenic | 30.0% | |
| ATATTGATGAGTGCAACAAA+TGG | + | chr3.4:22081170-22081189 | MS.gene82295:intron | 30.0% | |
| ATCAAAAAGAAAACCCAGAT+AGG | - | chr3.4:22077331-22077350 | None:intergenic | 30.0% | |
| ATCATAATTAAACGCTAGGT+AGG | - | chr3.4:22080453-22080472 | None:intergenic | 30.0% | |
| ATCGACATTAATCCTTATCA+CGG | - | chr3.4:22077792-22077811 | None:intergenic | 30.0% | |
| GAAGACATAAATAGATGTTG+TGG | - | chr3.4:22078974-22078993 | None:intergenic | 30.0% | |
| GAGCCTAAAACAATATACTA+GGG | + | chr3.4:22081272-22081291 | MS.gene82295:intron | 30.0% | |
| TCATAATTAAACGCTAGGTA+GGG | - | chr3.4:22080452-22080471 | None:intergenic | 30.0% | |
| TCCCTTATAAAACTAAAACG+GGG | + | chr3.4:22080154-22080173 | MS.gene82295:intron | 30.0% | |
| TGATACAATCTCTTCTATGT+TGG | + | chr3.4:22078078-22078097 | MS.gene82295:intron | 30.0% | |
| TGCAAATTGTTGTCAAATAG+AGG | + | chr3.4:22080295-22080314 | MS.gene82295:intron | 30.0% | |
| TGCTACAAGTGAAGAAAAAA+TGG | + | chr3.4:22078901-22078920 | MS.gene82295:CDS | 30.0% | |
| TTACGCAACTTCAATTCTTA+TGG | - | chr3.4:22081071-22081090 | None:intergenic | 30.0% | |
| TTCAATACCAGAAATAAGCA+GGG | - | chr3.4:22080201-22080220 | None:intergenic | 30.0% | |
| ! | ACCTATCATTTCCCTTTTTA+GGG | - | chr3.4:22081369-22081388 | None:intergenic | 30.0% |
| ! | ATCTGGGTTTTCTTTTTGAT+TGG | + | chr3.4:22077331-22077350 | MS.gene82295:intron | 30.0% |
| ! | CATGGTTAGAAGGTTTTTAA+CGG | + | chr3.4:22077871-22077890 | MS.gene82295:intron | 30.0% |
| ! | GGTGTTTTCATAAGTTATCT+TGG | + | chr3.4:22079336-22079355 | MS.gene82295:intron | 30.0% |
| !! | AAATAAGCAAAAGCATCTTG+AGG | + | chr3.4:22078637-22078656 | MS.gene82295:CDS | 30.0% |
| !! | AATTGTCTTTGGAATCTTTC+AGG | + | chr3.4:22077963-22077982 | MS.gene82295:intron | 30.0% |
| !! | ATTGTCTTTGGAATCTTTCA+GGG | + | chr3.4:22077964-22077983 | MS.gene82295:intron | 30.0% |
| !! | CATTCATCATTTTTAACGAG+AGG | - | chr3.4:22080954-22080973 | None:intergenic | 30.0% |
| !! | CTAACATGCATTTAAGTTGA+AGG | + | chr3.4:22080760-22080779 | MS.gene82295:intron | 30.0% |
| !!! | ACTATTTTTGTAGAAGCTCT+AGG | + | chr3.4:22079314-22079333 | MS.gene82295:intron | 30.0% |
| !!! | CTATTTTTGTAGAAGCTCTA+GGG | + | chr3.4:22079315-22079334 | MS.gene82295:intron | 30.0% |
| AAAATTGGGCCCCAAAAAAT+TGG | - | chr3.4:22079909-22079928 | None:intergenic | 35.0% | |
| AAGTTGCAGTCATTAACTTC+AGG | - | chr3.4:22079834-22079853 | None:intergenic | 35.0% | |
| AATGACTGCAACTTATTTCC+AGG | + | chr3.4:22079840-22079859 | MS.gene82295:intron | 35.0% | |
| ACCCTAAAAAGGGAAATGAT+AGG | + | chr3.4:22081365-22081384 | MS.gene82295:intron | 35.0% | |
| ACTTAATACATGATGCCATC+AGG | + | chr3.4:22080721-22080740 | MS.gene82295:intron | 35.0% | |
| AGCAAAAAGCTAGACACATT+AGG | - | chr3.4:22079499-22079518 | None:intergenic | 35.0% | |
| AGTTGCAGTCATTAACTTCA+GGG | - | chr3.4:22079833-22079852 | None:intergenic | 35.0% | |
| ATCTTGGAAATATCTCTCCT+CGG | + | chr3.4:22077521-22077540 | MS.gene82295:intron | 35.0% | |
| ATGACTGCAACTTATTTCCA+GGG | + | chr3.4:22079841-22079860 | MS.gene82295:intron | 35.0% | |
| ATGATGAGGACACACTAAAT+TGG | + | chr3.4:22081243-22081262 | MS.gene82295:intron | 35.0% | |
| ATTGAAGTAGGAACACAATC+AGG | + | chr3.4:22077448-22077467 | MS.gene82295:intron | 35.0% | |
| CAAAGATAAGAACCAGGATA+AGG | - | chr3.4:22080666-22080685 | None:intergenic | 35.0% | |
| CAGAGACATACAACTATCTA+AGG | - | chr3.4:22079043-22079062 | None:intergenic | 35.0% | |
| CATAAATCTCCATGTACATG+AGG | - | chr3.4:22078545-22078564 | None:intergenic | 35.0% | |
| CTAAAAAGGGAAATGATAGG+TGG | + | chr3.4:22081368-22081387 | MS.gene82295:intron | 35.0% | |
| CTCAACATTAACCAACACTT+TGG | - | chr3.4:22081430-22081449 | None:intergenic | 35.0% | |
| CTTTGTAAGTTCTTTGCTCA+TGG | + | chr3.4:22077989-22078008 | MS.gene82295:CDS | 35.0% | |
| GAATATTACGTTCCTTTGTC+GGG | + | chr3.4:22080921-22080940 | MS.gene82295:intron | 35.0% | |
| GATGAGAAATTTGAGGAGAA+TGG | + | chr3.4:22081396-22081415 | MS.gene82295:CDS | 35.0% | |
| GCAAAAAGCTAGACACATTA+GGG | - | chr3.4:22079498-22079517 | None:intergenic | 35.0% | |
| GCGTATCGTGTATTAGAAAT+TGG | + | chr3.4:22078774-22078793 | MS.gene82295:CDS | 35.0% | |
| GGAAATCATTGATACCTACA+AGG | + | chr3.4:22078922-22078941 | MS.gene82295:CDS | 35.0% | |
| GGAAATGCATCACTTGATAA+CGG | + | chr3.4:22081474-22081493 | MS.gene82295:CDS | 35.0% | |
| GGAAGATGATGTTGTTCAAT+CGG | + | chr3.4:22078445-22078464 | MS.gene82295:CDS | 35.0% | |
| GGAATATTACGTTCCTTTGT+CGG | + | chr3.4:22080920-22080939 | MS.gene82295:intron | 35.0% | |
| GGTACTAGTATTATCAACCA+CGG | - | chr3.4:22080390-22080409 | None:intergenic | 35.0% | |
| GGTATAGCACTATAGTGTAA+GGG | + | chr3.4:22080335-22080354 | MS.gene82295:intron | 35.0% | |
| GGTTGAAGATGAGAAATTTG+AGG | + | chr3.4:22081389-22081408 | MS.gene82295:CDS | 35.0% | |
| GTAGCATACCAAATAACACT+TGG | - | chr3.4:22078887-22078906 | None:intergenic | 35.0% | |
| GTAGTAGTAACCCAACATTA+GGG | + | chr3.4:22078798-22078817 | MS.gene82295:CDS | 35.0% | |
| GTGATGTAAGTCTCAAACTT+GGG | + | chr3.4:22080799-22080818 | MS.gene82295:intron | 35.0% | |
| GTTCAATACCAGAAATAAGC+AGG | - | chr3.4:22080202-22080221 | None:intergenic | 35.0% | |
| TAACATCCATCCCTAATGTT+GGG | - | chr3.4:22078811-22078830 | None:intergenic | 35.0% | |
| TATCACCAACATTATTCGGA+GGG | - | chr3.4:22078063-22078082 | None:intergenic | 35.0% | |
| TATTGAAGAAGATGGAGTAG+AGG | - | chr3.4:22078261-22078280 | None:intergenic | 35.0% | |
| TGATGAGGACACACTAAATT+GGG | + | chr3.4:22081244-22081263 | MS.gene82295:intron | 35.0% | |
| TGGATGTTAATAGCACATTG+CGG | + | chr3.4:22078822-22078841 | MS.gene82295:CDS | 35.0% | |
| TGGTGAAAAATCCAAAGTGT+TGG | + | chr3.4:22081416-22081435 | MS.gene82295:CDS | 35.0% | |
| TGTGATGTAAGTCTCAAACT+TGG | + | chr3.4:22080798-22080817 | MS.gene82295:intron | 35.0% | |
| TGTTCGGTTATTGAAGAAGA+TGG | - | chr3.4:22078269-22078288 | None:intergenic | 35.0% | |
| TTAACATCCATCCCTAATGT+TGG | - | chr3.4:22078812-22078831 | None:intergenic | 35.0% | |
| ! | ATGCTTTGTGTTTTCGTTTG+CGG | + | chr3.4:22077845-22077864 | MS.gene82295:intron | 35.0% |
| ! | ATTGTGAGTTTTCTCATGAC+TGG | + | chr3.4:22078032-22078051 | MS.gene82295:CDS | 35.0% |
| ! | CACCTATCATTTCCCTTTTT+AGG | - | chr3.4:22081370-22081389 | None:intergenic | 35.0% |
| ! | CTACTATTTTCTACTATCCG+TGG | + | chr3.4:22080370-22080389 | MS.gene82295:intron | 35.0% |
| ! | CTTATCCTGGTTCTTATCTT+TGG | + | chr3.4:22080664-22080683 | MS.gene82295:intron | 35.0% |
| ! | TTGTCGTTCCAAGTGTTATT+TGG | + | chr3.4:22078876-22078895 | MS.gene82295:CDS | 35.0% |
| !! | ACGAGTCGATTTTTATGATG+AGG | + | chr3.4:22081229-22081248 | MS.gene82295:intron | 35.0% |
| !! | AGCATTGATATGCATGTGTA+GGG | + | chr3.4:22079116-22079135 | MS.gene82295:intron | 35.0% |
| !! | AGTTGATTGTTTTACGGTTG+AGG | + | chr3.4:22081503-22081522 | MS.gene82295:CDS | 35.0% |
| !! | CATGCATTTAAGTTGAAGGT+CGG | + | chr3.4:22080764-22080783 | MS.gene82295:intron | 35.0% |
| !! | GGCCTATGAATTTGTTAAGA+CGG | + | chr3.4:22080175-22080194 | MS.gene82295:intron | 35.0% |
| !! | TAGCATTGATATGCATGTGT+AGG | + | chr3.4:22079115-22079134 | MS.gene82295:intron | 35.0% |
| !! | TTGGACATTTCACCGATTTA+TGG | + | chr3.4:22078097-22078116 | MS.gene82295:intron | 35.0% |
| !!! | GCCCCGTTTTAGTTTTATAA+GGG | - | chr3.4:22080158-22080177 | None:intergenic | 35.0% |
| AACACCATTCGATGTAACTC+GGG | - | chr3.4:22078330-22078349 | None:intergenic | 40.0% | |
| AATACCCGAGTTACATCGAA+TGG | + | chr3.4:22078323-22078342 | MS.gene82295:CDS | 40.0% | |
| ACGTAATATTCCTGAAACCC+AGG | - | chr3.4:22080912-22080931 | None:intergenic | 40.0% | |
| AGAGAGAAACCTGATGTCTT+TGG | - | chr3.4:22080642-22080661 | None:intergenic | 40.0% | |
| ATAAGAACAGTCTGCACACA+AGG | - | chr3.4:22077933-22077952 | None:intergenic | 40.0% | |
| ATCACCAACATTATTCGGAG+GGG | - | chr3.4:22078062-22078081 | None:intergenic | 40.0% | |
| CAACACCATTCGATGTAACT+CGG | - | chr3.4:22078331-22078350 | None:intergenic | 40.0% | |
| CAGAAAGGAGTTTGTGCTTA+TGG | + | chr3.4:22078191-22078210 | MS.gene82295:CDS | 40.0% | |
| CCATAATTGCCAAAGACATC+AGG | + | chr3.4:22080630-22080649 | MS.gene82295:CDS | 40.0% | |
| CCTGATGTCTTTGGCAATTA+TGG | - | chr3.4:22080633-22080652 | None:intergenic | 40.0% | |
| CGGTATAGCACTATAGTGTA+AGG | + | chr3.4:22080334-22080353 | MS.gene82295:intron | 40.0% | |
| CGTAGTAGTAACCCAACATT+AGG | + | chr3.4:22078797-22078816 | MS.gene82295:CDS | 40.0% | |
| CTAATACACGATACGCAGAA+CGG | - | chr3.4:22078770-22078789 | None:intergenic | 40.0% | |
| GAACAACATCATCTTCCCTT+AGG | - | chr3.4:22078442-22078461 | None:intergenic | 40.0% | |
| GAACAATGTCCTCATGTACA+TGG | + | chr3.4:22078533-22078552 | MS.gene82295:CDS | 40.0% | |
| GCAGCAGCAAATGAACAAAT+CGG | - | chr3.4:22078494-22078513 | None:intergenic | 40.0% | |
| GCAGTCAATTGACCTACAAA+TGG | - | chr3.4:22079551-22079570 | None:intergenic | 40.0% | |
| GGATGTTAATAGCACATTGC+GGG | + | chr3.4:22078823-22078842 | MS.gene82295:CDS | 40.0% | |
| GGCCGTCTTAACAAATTCAT+AGG | - | chr3.4:22080180-22080199 | None:intergenic | 40.0% | |
| GTATCACCAACATTATTCGG+AGG | - | chr3.4:22078064-22078083 | None:intergenic | 40.0% | |
| TAGTAACCCAACATTAGGGA+TGG | + | chr3.4:22078802-22078821 | MS.gene82295:CDS | 40.0% | |
| TCCAAAGAAGAAGAGGTAGA+TGG | + | chr3.4:22081453-22081472 | MS.gene82295:CDS | 40.0% | |
| TCCATCTACCTCTTCTTCTT+TGG | - | chr3.4:22081457-22081476 | None:intergenic | 40.0% | |
| TCTTGGAAATATCTCTCCTC+GGG | + | chr3.4:22077522-22077541 | MS.gene82295:intron | 40.0% | |
| TGAGTTGTCCAAAGAAGAAG+AGG | + | chr3.4:22081446-22081465 | MS.gene82295:CDS | 40.0% | |
| TGCACAACTTGACTTCCTAA+GGG | + | chr3.4:22078424-22078443 | MS.gene82295:CDS | 40.0% | |
| TGTATCCAATGCTTCGACAT+GGG | + | chr3.4:22080885-22080904 | MS.gene82295:intron | 40.0% | |
| TGTTCACTGGGAAGAACAAA+GGG | - | chr3.4:22078386-22078405 | None:intergenic | 40.0% | |
| TTACTTGAGCTTTGCCTTGT+AGG | - | chr3.4:22078939-22078958 | None:intergenic | 40.0% | |
| TTAGTTGCCTTGTGATGTTG+AGG | + | chr3.4:22077486-22077505 | MS.gene82295:intron | 40.0% | |
| TTGTATCCAATGCTTCGACA+TGG | + | chr3.4:22080884-22080903 | MS.gene82295:intron | 40.0% | |
| TTGTGCAGATTCTTGATTCC+AGG | - | chr3.4:22078411-22078430 | None:intergenic | 40.0% | |
| TTGTTCACTGGGAAGAACAA+AGG | - | chr3.4:22078387-22078406 | None:intergenic | 40.0% | |
| TTTGAGCGGTGAAAAACTTG+CGG | + | chr3.4:22077567-22077586 | MS.gene82295:intron | 40.0% | |
| TTTGCGGAAACATGGTTAGA+AGG | + | chr3.4:22077861-22077880 | MS.gene82295:intron | 40.0% | |
| ! | AAGCATTGTCTTCCACATGA+GGG | - | chr3.4:22078569-22078588 | None:intergenic | 40.0% |
| ! | ATTTGTTCATTTGCTGCTGC+TGG | + | chr3.4:22078494-22078513 | MS.gene82295:CDS | 40.0% |
| ! | GAAAATGGTCAAAGAGCACA+AGG | - | chr3.4:22080690-22080709 | None:intergenic | 40.0% |
| ! | GCATTGATATGCATGTGTAG+GGG | + | chr3.4:22079117-22079136 | MS.gene82295:intron | 40.0% |
| ! | TAAGATAGCTTGCGACAGAT+AGG | - | chr3.4:22078854-22078873 | None:intergenic | 40.0% |
| ! | TAGGCTCTAGTTGTTCTGTA+AGG | - | chr3.4:22080516-22080535 | None:intergenic | 40.0% |
| ! | TCTAGAATAAAAAGGGGCAC+CGG | - | chr3.4:22077757-22077776 | None:intergenic | 40.0% |
| ! | TGTTTTACGGTTGAGGAAGA+TGG | + | chr3.4:22081510-22081529 | MS.gene82295:CDS | 40.0% |
| ! | TGTTTTCGTTTGCGGAAACA+TGG | + | chr3.4:22077853-22077872 | MS.gene82295:intron | 40.0% |
| !! | TACAGCCGATTCTGAAACAA+GGG | - | chr3.4:22078297-22078316 | None:intergenic | 40.0% |
| !! | TAGACACATTAGGGCTAGTT+TGG | - | chr3.4:22079489-22079508 | None:intergenic | 40.0% |
| !!! | AAGCATTTTGACTTTGGCGA+AGG | + | chr3.4:22079571-22079590 | MS.gene82295:CDS | 40.0% |
| !!! | GACTGCAAGCATTTTGACTT+TGG | + | chr3.4:22079565-22079584 | MS.gene82295:CDS | 40.0% |
| !!! | GACTTTTTAAGGCCGTGATA+AGG | + | chr3.4:22077777-22077796 | MS.gene82295:intron | 40.0% |
| !!! | GGCCCCGTTTTAGTTTTATA+AGG | - | chr3.4:22080159-22080178 | None:intergenic | 40.0% |
| AAAGCCCCTCCGAATAATGT+TGG | + | chr3.4:22078055-22078074 | MS.gene82295:intron | 45.0% | |
| AAATGGCTAGTGGGAGAGAA+TGG | + | chr3.4:22081187-22081206 | MS.gene82295:intron | 45.0% | |
| AAGGAAATCCGACAACCTGA+TGG | - | chr3.4:22080739-22080758 | None:intergenic | 45.0% | |
| AAGGCAACTAAAGAGACCTC+TGG | - | chr3.4:22077477-22077496 | None:intergenic | 45.0% | |
| AGACATGCATAGCGAGTGTT+TGG | - | chr3.4:22077696-22077715 | None:intergenic | 45.0% | |
| AGACTGTTTGGGAGAGCTTA+GGG | - | chr3.4:22079415-22079434 | None:intergenic | 45.0% | |
| AGCATTGTCTTCCACATGAG+GGG | - | chr3.4:22078568-22078587 | None:intergenic | 45.0% | |
| ATAGCGAGTGTTTGGGAAAG+CGG | - | chr3.4:22077688-22077707 | None:intergenic | 45.0% | |
| ATCTGCTTAGTGTGCTTCTG+TGG | + | chr3.4:22079993-22080012 | MS.gene82295:intron | 45.0% | |
| ATTGGGCCCCAAAAAATTGG+AGG | - | chr3.4:22079906-22079925 | None:intergenic | 45.0% | |
| CAAGGCCAAAGATAAGAACC+AGG | - | chr3.4:22080672-22080691 | None:intergenic | 45.0% | |
| CTGCACAACTTGACTTCCTA+AGG | + | chr3.4:22078423-22078442 | MS.gene82295:CDS | 45.0% | |
| CTTGGAAATATCTCTCCTCG+GGG | + | chr3.4:22077523-22077542 | MS.gene82295:intron | 45.0% | |
| GAACAAATCGGAAGCTCAGA+AGG | - | chr3.4:22078482-22078501 | None:intergenic | 45.0% | |
| GAACACAATCAGGTTTCCAG+AGG | + | chr3.4:22077458-22077477 | MS.gene82295:intron | 45.0% | |
| GACAATGCTTGCATCCTTTC+CGG | + | chr3.4:22078579-22078598 | MS.gene82295:CDS | 45.0% | |
| GACATGCATAGCGAGTGTTT+GGG | - | chr3.4:22077695-22077714 | None:intergenic | 45.0% | |
| GAGTGCAACAAATGGCTAGT+GGG | + | chr3.4:22081178-22081197 | MS.gene82295:intron | 45.0% | |
| GCGTGTTCTTTCAAAGCCTA+CGG | + | chr3.4:22078703-22078722 | MS.gene82295:CDS | 45.0% | |
| GGTTTCTCTCTACCTTATCC+TGG | + | chr3.4:22080651-22080670 | MS.gene82295:intron | 45.0% | |
| GTATCCAATGCTTCGACATG+GGG | + | chr3.4:22080886-22080905 | MS.gene82295:intron | 45.0% | |
| GTGACTGTGTGAGACTGTTT+GGG | - | chr3.4:22079426-22079445 | None:intergenic | 45.0% | |
| GTTCTTCTCTTTCTTCAGGC+CGG | - | chr3.4:22078601-22078620 | None:intergenic | 45.0% | |
| GTTTCAGAATCGGCTGTACT+TGG | + | chr3.4:22078299-22078318 | MS.gene82295:CDS | 45.0% | |
| TAGTGCTATACCGCTGCTAT+AGG | - | chr3.4:22080327-22080346 | None:intergenic | 45.0% | |
| TGAGTGCAACAAATGGCTAG+TGG | + | chr3.4:22081177-22081196 | MS.gene82295:intron | 45.0% | |
| TGTGACTGTGTGAGACTGTT+TGG | - | chr3.4:22079427-22079446 | None:intergenic | 45.0% | |
| TTGCAGCATGCATATCGTGA+TGG | + | chr3.4:22080557-22080576 | MS.gene82295:intron | 45.0% | |
| TTGGAAATATCTCTCCTCGG+GGG | + | chr3.4:22077524-22077543 | MS.gene82295:intron | 45.0% | |
| ! | AATGCTGCTTGAATGCACGT+TGG | + | chr3.4:22077652-22077671 | MS.gene82295:intron | 45.0% |
| ! | ACATGATGCCATCAGGTTGT+CGG | + | chr3.4:22080728-22080747 | MS.gene82295:intron | 45.0% |
| ! | AGAAGCAGCTAGTACCGAAA+GGG | - | chr3.4:22079603-22079622 | None:intergenic | 45.0% |
| ! | AGGTAGCTTTGCGTCATCTT+GGG | + | chr3.4:22080591-22080610 | MS.gene82295:CDS | 45.0% |
| ! | CAAGCATTGTCTTCCACATG+AGG | - | chr3.4:22078570-22078589 | None:intergenic | 45.0% |
| ! | GAGGTCAGGGTGTTAAATCT+TGG | + | chr3.4:22077505-22077524 | MS.gene82295:intron | 45.0% |
| ! | GGTAGCTTTTGGTGAATGAG+AGG | + | chr3.4:22080020-22080039 | MS.gene82295:intron | 45.0% |
| ! | GTGCTTGTGTTGTCTTGTTG+TGG | + | chr3.4:22078150-22078169 | MS.gene82295:intron | 45.0% |
| ! | TAGAAGCAGCTAGTACCGAA+AGG | - | chr3.4:22079604-22079623 | None:intergenic | 45.0% |
| ! | TGATTCCAGGCTTGTTCACT+GGG | - | chr3.4:22078398-22078417 | None:intergenic | 45.0% |
| ! | TTGATTCCAGGCTTGTTCAC+TGG | - | chr3.4:22078399-22078418 | None:intergenic | 45.0% |
| !! | ACAGCCGATTCTGAAACAAG+GGG | - | chr3.4:22078296-22078315 | None:intergenic | 45.0% |
| !! | ACATTAGGGCTAGTTTGGAC+AGG | - | chr3.4:22079484-22079503 | None:intergenic | 45.0% |
| !! | GTACAGCCGATTCTGAAACA+AGG | - | chr3.4:22078298-22078317 | None:intergenic | 45.0% |
| AAGACGGCCCTGCTTATTTC+TGG | + | chr3.4:22080191-22080210 | MS.gene82295:intron | 50.0% | |
| AATATCTCTCCTCGGGGGTA+AGG | + | chr3.4:22077529-22077548 | MS.gene82295:intron | 50.0% | |
| ACCCTGACCTCAACATCACA+AGG | - | chr3.4:22077496-22077515 | None:intergenic | 50.0% | |
| ATATCGTGATGGCCGTCTTG+AGG | + | chr3.4:22080568-22080587 | MS.gene82295:CDS | 50.0% | |
| CGGTACTAGCTGCTTCTACA+AGG | + | chr3.4:22079606-22079625 | MS.gene82295:CDS | 50.0% | |
| CGGTGAAAAACTTGCGGTGA+TGG | + | chr3.4:22077573-22077592 | MS.gene82295:intron | 50.0% | |
| CTCATGGAGCGTGTCTGAAA+GGG | + | chr3.4:22078005-22078024 | MS.gene82295:CDS | 50.0% | |
| CTGCAACTTATTTCCAGGGC+CGG | + | chr3.4:22079845-22079864 | MS.gene82295:intron | 50.0% | |
| GAGACTGTTTGGGAGAGCTT+AGG | - | chr3.4:22079416-22079435 | None:intergenic | 50.0% | |
| GAGGCTATAGCCTATAGCAG+CGG | + | chr3.4:22080314-22080333 | MS.gene82295:intron | 50.0% | |
| GCAAAGCTACCTCCTCAAGA+CGG | - | chr3.4:22080583-22080602 | None:intergenic | 50.0% | |
| GCCTTGTGATGTTGAGGTCA+GGG | + | chr3.4:22077492-22077511 | MS.gene82295:intron | 50.0% | |
| GGAGATTTATGCCCCTCATG+TGG | + | chr3.4:22078554-22078573 | MS.gene82295:CDS | 50.0% | |
| GTTCAGAGTGACGCCCTATT+TGG | + | chr3.4:22079196-22079215 | MS.gene82295:intron | 50.0% | |
| TCATGGAGCGTGTCTGAAAG+GGG | + | chr3.4:22078006-22078025 | MS.gene82295:CDS | 50.0% | |
| TCTCTTTCTTCAGGCCGGAA+AGG | - | chr3.4:22078596-22078615 | None:intergenic | 50.0% | |
| TGCCTTGTGATGTTGAGGTC+AGG | + | chr3.4:22077491-22077510 | MS.gene82295:intron | 50.0% | |
| TTACGTTCCTTTGTCGGGAC+TGG | + | chr3.4:22080926-22080945 | MS.gene82295:intron | 50.0% | |
| TTCTTCCCAGTGAACAAGCC+TGG | + | chr3.4:22078390-22078409 | MS.gene82295:CDS | 50.0% | |
| ! | CCAGCCCCTTGTTTCAGAAT+CGG | + | chr3.4:22078289-22078308 | MS.gene82295:CDS | 50.0% |
| ! | GAGGTAGCTTTGCGTCATCT+TGG | + | chr3.4:22080590-22080609 | MS.gene82295:CDS | 50.0% |
| ! | GGTAGCTTTGCGTCATCTTG+GGG | + | chr3.4:22080592-22080611 | MS.gene82295:CDS | 50.0% |
| ! | TGAAACAAGGGGCTGGTGTT+CGG | - | chr3.4:22078285-22078304 | None:intergenic | 50.0% |
| !! | GAATAAAAAGGGGCACCGGA+TGG | - | chr3.4:22077753-22077772 | None:intergenic | 50.0% |
| !! | GCTTTGAAAGAACACGCTCG+AGG | - | chr3.4:22078700-22078719 | None:intergenic | 50.0% |
| !!! | ACCGGGCCTCCAATTTTTTG+GGG | + | chr3.4:22079897-22079916 | MS.gene82295:intron | 50.0% |
| !!! | CACCGGGCCTCCAATTTTTT+GGG | + | chr3.4:22079896-22079915 | MS.gene82295:intron | 50.0% |
| AACTTACGCTCAGCTGCCGT+AGG | - | chr3.4:22078722-22078741 | None:intergenic | 55.0% | |
| AATGCTTCGACATGGGGCCT+GGG | + | chr3.4:22080892-22080911 | MS.gene82295:intron | 55.0% | |
| ACGGCAGCTGAGCGTAAGTT+TGG | + | chr3.4:22078722-22078741 | MS.gene82295:CDS | 55.0% | |
| CTGCTGGAAACTGTCCACGA+GGG | + | chr3.4:22078510-22078529 | MS.gene82295:CDS | 55.0% | |
| GCCCCAAAAAATTGGAGGCC+CGG | - | chr3.4:22079901-22079920 | None:intergenic | 55.0% | |
| GCTCATGGAGCGTGTCTGAA+AGG | + | chr3.4:22078004-22078023 | MS.gene82295:CDS | 55.0% | |
| GGCGAAGGAAACTGCCCTTT+CGG | + | chr3.4:22079586-22079605 | MS.gene82295:CDS | 55.0% | |
| GTGCTTATGGTAGTCGCTGC+AGG | + | chr3.4:22078204-22078223 | MS.gene82295:CDS | 55.0% | |
| TATCCTCCCCAGATTCCACC+TGG | + | chr3.4:22077715-22077734 | MS.gene82295:intron | 55.0% | |
| TGAGGACATTGTTCCCCTCG+TGG | - | chr3.4:22078527-22078546 | None:intergenic | 55.0% | |
| TGCTGGAAACTGTCCACGAG+GGG | + | chr3.4:22078511-22078530 | MS.gene82295:CDS | 55.0% | |
| TTAGTGTGCTTCTGTGGCGC+AGG | + | chr3.4:22079999-22080018 | MS.gene82295:intron | 55.0% | |
| ! | TATGCATAGCCTTACCCCCG+AGG | - | chr3.4:22077541-22077560 | None:intergenic | 55.0% |
| ! | TCTGTGGCGCAGGTAGCTTT+TGG | + | chr3.4:22080009-22080028 | MS.gene82295:intron | 55.0% |
| !! | CCGATTCTGAAACAAGGGGC+TGG | - | chr3.4:22078292-22078311 | None:intergenic | 55.0% |
| !!! | GCACCGGGCCTCCAATTTTT+TGG | + | chr3.4:22079895-22079914 | MS.gene82295:intron | 55.0% |
| CAATGCTTCGACATGGGGCC+TGG | + | chr3.4:22080891-22080910 | MS.gene82295:intron | 60.0% | |
| CAGGCCCCATGTCGAAGCAT+TGG | - | chr3.4:22080893-22080912 | None:intergenic | 60.0% | |
| CGTCATCTTGGGGCTGCAGA+TGG | + | chr3.4:22080602-22080621 | MS.gene82295:CDS | 60.0% | |
| CTCCCACCAGGTGGAATCTG+GGG | - | chr3.4:22077724-22077743 | None:intergenic | 60.0% | |
| CTCCCCAGATTCCACCTGGT+GGG | + | chr3.4:22077719-22077738 | MS.gene82295:intron | 60.0% | |
| GCATGTGTAGGGGCTGCAGA+TGG | + | chr3.4:22079127-22079146 | MS.gene82295:intron | 60.0% | |
| GCTCCCACCAGGTGGAATCT+GGG | - | chr3.4:22077725-22077744 | None:intergenic | 60.0% | |
| GCTGCTGGAAACTGTCCACG+AGG | + | chr3.4:22078509-22078528 | MS.gene82295:CDS | 60.0% | |
| TCGTGATGGCCGTCTTGAGG+AGG | + | chr3.4:22080571-22080590 | MS.gene82295:CDS | 60.0% | |
| CCACCAGGTGGAATCTGGGG+AGG | - | chr3.4:22077721-22077740 | None:intergenic | 65.0% | |
| CCTCCCCAGATTCCACCTGG+TGG | + | chr3.4:22077718-22077737 | MS.gene82295:intron | 65.0% | |
| CGACATGGGGCCTGGGTTTC+AGG | + | chr3.4:22080899-22080918 | MS.gene82295:intron | 65.0% | |
| GGCTCCCACCAGGTGGAATC+TGG | - | chr3.4:22077726-22077745 | None:intergenic | 65.0% | |
| TGGTGGGAGCCTCGTCCATC+CGG | + | chr3.4:22077735-22077754 | MS.gene82295:intron | 65.0% | |
| !! | AAAGGGGCACCGGATGGACG+AGG | - | chr3.4:22077747-22077766 | None:intergenic | 65.0% |
| AGCCCGTCGAGGCTGGGCTA+CGG | + | chr3.4:22079873-22079892 | MS.gene82295:intron | 70.0% | |
| GCCCATAGCCCGTCGAGGCT+GGG | + | chr3.4:22079867-22079886 | MS.gene82295:intron | 70.0% | |
| GGATGGACGAGGCTCCCACC+AGG | - | chr3.4:22077736-22077755 | None:intergenic | 70.0% | |
| GTGCCGTAGCCCAGCCTCGA+CGG | - | chr3.4:22079879-22079898 | None:intergenic | 70.0% | |
| TCGAGGCTGGGCTACGGCAC+CGG | + | chr3.4:22079879-22079898 | MS.gene82295:intron | 70.0% | |
| TGCCGTAGCCCAGCCTCGAC+GGG | - | chr3.4:22079878-22079897 | None:intergenic | 70.0% | |
| TGGACGAGGCTCCCACCAGG+TGG | - | chr3.4:22077733-22077752 | None:intergenic | 70.0% | |
| !! | AGCCCAGCCTCGACGGGCTA+TGG | - | chr3.4:22079872-22079891 | None:intergenic | 70.0% |
| !! | AGCCTCGACGGGCTATGGGC+CGG | - | chr3.4:22079867-22079886 | None:intergenic | 70.0% |
| !! | GCCCAGCCTCGACGGGCTAT+GGG | - | chr3.4:22079871-22079890 | None:intergenic | 70.0% |
| CGAGGCTGGGCTACGGCACC+GGG | + | chr3.4:22079880-22079899 | MS.gene82295:intron | 75.0% | |
| GGCCCATAGCCCGTCGAGGC+TGG | + | chr3.4:22079866-22079885 | MS.gene82295:intron | 75.0% | |
| ! | GGCCGGCCCATAGCCCGTCG+AGG | + | chr3.4:22079862-22079881 | MS.gene82295:intron | 80.0% |
| !!! | GACGGGCTATGGGCCGGCCC+TGG | - | chr3.4:22079861-22079880 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 22076951 | 22081536 | 22076951 | ID=MS.gene82295 |
| chr3.4 | mRNA | 22076951 | 22081536 | 22076951 | ID=MS.gene82295.t1;Parent=MS.gene82295 |
| chr3.4 | exon | 22076951 | 22076961 | 22076951 | ID=MS.gene82295.t1.exon1;Parent=MS.gene82295.t1 |
| chr3.4 | CDS | 22076951 | 22076961 | 22076951 | ID=cds.MS.gene82295.t1;Parent=MS.gene82295.t1 |
| chr3.4 | exon | 22077985 | 22078072 | 22077985 | ID=MS.gene82295.t1.exon2;Parent=MS.gene82295.t1 |
| chr3.4 | CDS | 22077985 | 22078072 | 22077985 | ID=cds.MS.gene82295.t1;Parent=MS.gene82295.t1 |
| chr3.4 | exon | 22078176 | 22078954 | 22078176 | ID=MS.gene82295.t1.exon3;Parent=MS.gene82295.t1 |
| chr3.4 | CDS | 22078176 | 22078954 | 22078176 | ID=cds.MS.gene82295.t1;Parent=MS.gene82295.t1 |
| chr3.4 | exon | 22079558 | 22079627 | 22079558 | ID=MS.gene82295.t1.exon4;Parent=MS.gene82295.t1 |
| chr3.4 | CDS | 22079558 | 22079627 | 22079558 | ID=cds.MS.gene82295.t1;Parent=MS.gene82295.t1 |
| chr3.4 | exon | 22080563 | 22080651 | 22080563 | ID=MS.gene82295.t1.exon5;Parent=MS.gene82295.t1 |
| chr3.4 | CDS | 22080563 | 22080651 | 22080563 | ID=cds.MS.gene82295.t1;Parent=MS.gene82295.t1 |
| chr3.4 | exon | 22080782 | 22080803 | 22080782 | ID=MS.gene82295.t1.exon6;Parent=MS.gene82295.t1 |
| chr3.4 | CDS | 22080782 | 22080803 | 22080782 | ID=cds.MS.gene82295.t1;Parent=MS.gene82295.t1 |
| chr3.4 | exon | 22081387 | 22081536 | 22081387 | ID=MS.gene82295.t1.exon7;Parent=MS.gene82295.t1 |
| chr3.4 | CDS | 22081387 | 22081536 | 22081387 | ID=cds.MS.gene82295.t1;Parent=MS.gene82295.t1 |
| Gene Sequence |
| Protein sequence |
