AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene83075

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83075.t1 MTR_6g477900 32.716 162 90 7 4 154 6 159 3.89e-18 79.0
MS.gene83075.t1 MTR_2g064090 31.098 164 95 7 4 156 6 162 2.96e-16 75.1
MS.gene83075.t1 MTR_4g089135 35.294 136 75 5 4 133 15 143 2.91e-15 72.4
MS.gene83075.t1 MTR_2g080010 35.000 140 77 6 4 136 15 147 4.92e-15 72.0
MS.gene83075.t1 MTR_4g094302 31.783 129 79 4 4 132 11 130 1.06e-14 68.2
MS.gene83075.t1 MTR_1g008740 34.286 140 80 5 2 135 25 158 1.27e-14 70.9
MS.gene83075.t1 MTR_1g008740 34.286 140 80 5 2 135 11 144 1.44e-14 70.5
MS.gene83075.t1 MTR_5g041940 32.353 136 77 5 4 133 3 129 1.74e-14 69.3
MS.gene83075.t1 MTR_4g094302 31.783 129 79 4 4 132 11 130 2.50e-14 67.8
MS.gene83075.t1 MTR_2g093810 32.867 143 83 6 4 140 14 149 2.81e-14 69.7
MS.gene83075.t1 MTR_3g064580 33.333 135 77 5 4 132 6 133 8.79e-14 68.6
MS.gene83075.t1 MTR_7g100990 35.556 135 74 6 4 132 11 138 1.23e-13 67.8
MS.gene83075.t1 MTR_8g023930 30.882 136 81 4 2 130 22 151 1.60e-13 67.8
MS.gene83075.t1 MTR_5g014300 30.380 158 91 7 4 148 6 157 4.42e-13 66.2
MS.gene83075.t1 MTR_3g109340 32.857 140 81 5 2 135 20 152 4.72e-13 66.2
MS.gene83075.t1 MTR_3g109340 32.857 140 81 5 2 135 20 152 4.79e-13 66.2
MS.gene83075.t1 MTR_8g023900 28.261 138 82 5 2 130 10 139 6.25e-13 66.2
MS.gene83075.t1 MTR_8g023900 28.402 169 104 5 7 166 196 356 1.18e-12 65.5
MS.gene83075.t1 MTR_3g088110 32.117 137 77 5 4 134 7 133 7.63e-13 65.1
MS.gene83075.t1 MTR_4g108760 30.337 178 103 8 4 169 17 185 9.61e-13 65.5
MS.gene83075.t1 MTR_6g084430 31.609 174 100 9 2 165 3 167 1.01e-12 65.1
MS.gene83075.t1 MTR_8g023860 29.496 139 81 5 1 130 9 139 1.15e-12 65.5
MS.gene83075.t1 MTR_8g059170 33.333 138 75 6 4 134 14 141 2.12e-12 64.3
MS.gene83075.t1 MTR_5g040420 29.927 137 83 4 2 132 12 141 2.15e-12 64.3
MS.gene83075.t1 MTR_8g467490 30.657 137 82 5 2 132 12 141 2.95e-12 63.9
MS.gene83075.t1 MTR_2g079990 32.215 149 84 7 4 145 16 154 6.78e-12 62.8
MS.gene83075.t1 MTR_2g062730 28.409 176 104 8 4 167 10 175 8.82e-12 62.8
MS.gene83075.t1 MTR_2g079990 33.333 138 75 7 4 134 16 143 1.25e-11 62.4
MS.gene83075.t1 MTR_8g023840 30.882 136 77 6 4 130 11 138 1.81e-11 62.0
MS.gene83075.t1 MTR_7g085220 32.886 149 76 9 4 136 8 148 1.84e-11 61.6
MS.gene83075.t1 MTR_4g035590 29.936 157 89 8 4 149 8 154 2.04e-11 61.6
MS.gene83075.t1 MTR_7g097090 30.519 154 92 6 4 150 10 155 4.54e-11 60.5
MS.gene83075.t1 MTR_8g093580 29.670 182 100 9 6 170 8 178 5.57e-11 60.5
MS.gene83075.t1 MTR_4g134460 33.813 139 66 7 6 132 56 180 5.73e-11 60.5
MS.gene83075.t1 MTR_8g093790 29.518 166 97 7 4 168 10 156 6.24e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83075.t1 AT3G17730 31.515 165 94 7 4 157 6 162 4.27e-18 79.0
MS.gene83075.t1 AT3G10480 33.742 163 91 6 4 156 27 182 1.07e-17 79.7
MS.gene83075.t1 AT3G10490 32.317 164 93 7 4 156 27 183 2.18e-17 77.0
MS.gene83075.t1 AT3G10480 33.537 164 91 7 4 156 27 183 7.21e-17 77.4
MS.gene83075.t1 AT3G10490 32.317 164 93 7 4 156 27 183 2.66e-16 75.9
MS.gene83075.t1 AT4G36160 30.625 160 97 5 4 155 10 163 1.35e-15 73.6
MS.gene83075.t1 AT4G36160 30.625 160 97 5 4 155 10 163 1.35e-15 73.6
MS.gene83075.t1 AT4G36160 30.625 160 97 5 4 155 14 167 1.40e-15 73.6
MS.gene83075.t1 AT1G54330 30.864 162 98 6 4 158 6 160 2.89e-15 72.0
MS.gene83075.t1 AT2G24430 35.714 140 77 5 2 135 14 146 2.94e-15 72.4
MS.gene83075.t1 AT2G24430 35.714 140 77 5 2 135 14 146 2.94e-15 72.4
MS.gene83075.t1 AT4G27410 31.395 172 91 9 4 158 14 175 5.75e-15 71.2
MS.gene83075.t1 AT1G69490 33.803 142 79 6 4 139 9 141 6.33e-15 70.9
MS.gene83075.t1 AT2G27300 26.190 168 110 5 6 167 16 175 7.43e-15 71.2
MS.gene83075.t1 AT5G39610 32.099 162 89 7 4 153 20 172 1.43e-14 70.1
MS.gene83075.t1 AT3G29035 32.948 173 94 9 4 163 24 187 2.38e-14 69.7
MS.gene83075.t1 AT1G71930 30.657 137 83 4 4 134 9 139 8.18e-14 68.2
MS.gene83075.t1 AT1G71930 30.657 137 83 4 4 134 9 139 8.18e-14 68.2
MS.gene83075.t1 AT3G15500 30.303 165 96 8 4 158 14 169 1.35e-13 67.8
MS.gene83075.t1 AT4G27410 29.032 186 94 8 4 158 14 192 1.43e-13 67.4
MS.gene83075.t1 AT5G07680 32.515 163 87 8 4 153 17 169 1.66e-13 67.4
MS.gene83075.t1 AT5G07680 32.515 163 87 8 4 153 3 155 2.17e-13 67.0
MS.gene83075.t1 AT1G01720 32.847 137 76 5 4 134 7 133 2.46e-13 66.6
MS.gene83075.t1 AT1G52890 29.341 167 97 7 4 159 14 170 2.75e-13 66.6
MS.gene83075.t1 AT5G46590 31.884 138 80 6 4 134 6 136 2.78e-13 66.6
MS.gene83075.t1 AT5G46590 31.884 138 80 6 4 134 6 136 2.94e-13 66.2
MS.gene83075.t1 AT5G64530 32.824 131 75 4 4 134 3 120 3.33e-13 64.3
MS.gene83075.t1 AT1G33060 32.192 146 76 7 1 135 21 154 4.16e-13 66.6
MS.gene83075.t1 AT1G33060 32.192 146 76 7 1 135 21 154 4.31e-13 66.6
MS.gene83075.t1 AT3G10480 29.082 196 90 8 4 156 27 216 4.66e-13 66.6
MS.gene83075.t1 AT3G10500 31.098 164 96 6 4 157 9 165 6.04e-13 66.2
MS.gene83075.t1 AT5G04410 28.962 183 104 8 4 170 9 181 6.20e-13 66.2
MS.gene83075.t1 AT1G26870 33.088 136 76 5 2 130 14 141 6.65e-13 66.2
MS.gene83075.t1 AT5G64530 32.824 131 75 4 4 134 3 120 7.99e-13 63.9
MS.gene83075.t1 AT5G61430 31.481 162 90 7 4 153 16 168 1.31e-12 65.1
MS.gene83075.t1 AT1G32510 30.137 146 80 6 3 134 5 142 2.44e-12 63.9
MS.gene83075.t1 AT5G18270 30.220 182 104 8 4 171 21 193 2.51e-12 64.3
MS.gene83075.t1 AT5G22290 27.820 133 82 5 6 132 23 147 2.76e-12 63.9
MS.gene83075.t1 AT5G18270 30.220 182 104 8 4 171 21 193 2.79e-12 63.9
MS.gene83075.t1 AT3G04060 30.675 163 91 7 4 153 20 173 3.82e-12 63.5
MS.gene83075.t1 AT4G10350 30.189 159 89 8 4 149 9 158 1.05e-11 62.4
MS.gene83075.t1 AT5G04395 27.848 158 93 6 4 144 28 181 1.45e-11 60.5
MS.gene83075.t1 AT3G18400 32.143 140 80 7 2 135 3 133 3.06e-11 60.8
MS.gene83075.t1 AT5G13180 30.534 131 83 4 4 132 14 138 4.63e-11 60.1
MS.gene83075.t1 AT5G50820 31.852 135 77 5 4 134 17 140 6.56e-11 58.9

Find 34 sgRNAs with CRISPR-Local

Find 96 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAACTTAAGCTTGCAATTA+TGG 0.155599 1.2:-16807870 MS.gene83075:CDS
GGCATTGTAAAACTGGATTT+TGG 0.180649 1.2:-16809183 MS.gene83075:CDS
CAATGGTTCTGACTTGATTA+AGG 0.258416 1.2:-16809317 MS.gene83075:CDS
CCTTGGGTGACGGAAGAAAA+AGG 0.333467 1.2:+16809246 None:intergenic
CTGAGGAGGCATTGTAAAAC+TGG 0.348869 1.2:-16809190 MS.gene83075:CDS
TGAGAAAGATTCAATTCATA+TGG 0.387204 1.2:+16809271 None:intergenic
AGGACGCAATTAAAACTAAC+TGG 0.389001 1.2:-16809063 MS.gene83075:CDS
GAAGAGGTTCAGAATTTCAA+TGG 0.424440 1.2:-16809334 MS.gene83075:CDS
TCAATTCATATGGGTCATAC+TGG 0.429700 1.2:+16809281 None:intergenic
CCTCCTCAGCTCATCAACTT+TGG 0.451013 1.2:+16809204 None:intergenic
GAATTGCTTCCACCTGGTGT+TGG 0.483908 1.2:-16809412 MS.gene83075:CDS
GTGAAGCAGTAAAACTCCCT+TGG 0.497106 1.2:+16809229 None:intergenic
ATTGCAAGCTTAAGTTGCTC+TGG 0.498542 1.2:+16807875 None:intergenic
CATATGGGTCATACTGGTAC+AGG 0.513417 1.2:+16809287 None:intergenic
GCTGTTCGAGAAATTACTGT+TGG 0.523362 1.2:-16809148 MS.gene83075:CDS
TGAAGCAGTAAAACTCCCTT+GGG 0.525171 1.2:+16809230 None:intergenic
CACTCTTGTTAACAAGCCTC+AGG 0.528444 1.2:-16809026 MS.gene83075:intron
GAGAAAGATTCAATTCATAT+GGG 0.554097 1.2:+16809272 None:intergenic
CCAAAGTTGATGAGCTGAGG+AGG 0.564041 1.2:-16809204 MS.gene83075:CDS
AGTAAAACTCCCTTGGGTGA+CGG 0.581299 1.2:+16809236 None:intergenic
CTACATAGGAAATTCCCCTC+AGG 0.587800 1.2:-16809083 MS.gene83075:CDS
GCAATGGAATTGCTTCCACC+TGG 0.606391 1.2:-16809418 MS.gene83075:CDS
CTAACAAGGAGCTCATCAGA+AGG 0.607644 1.2:+16809382 None:intergenic
TAACAAGGAGCTCATCAGAA+GGG 0.608778 1.2:+16809383 None:intergenic
GAAGGGACGAAGCCAACACC+AGG 0.610806 1.2:+16809400 None:intergenic
ACTTAAGCTTGCAATTATGG+AGG 0.614360 1.2:-16807867 MS.gene83075:CDS
TGGCAAGGTAGTAGCTAACA+AGG 0.615826 1.2:+16809368 None:intergenic
CTGCCAAAGTTGATGAGCTG+AGG 0.615832 1.2:-16809207 MS.gene83075:CDS
TGATTGTGTTGTCTTCCACA+TGG 0.623071 1.2:-16807909 MS.gene83075:CDS
TGGAGCTGATAACATGTTGG+TGG 0.633185 1.2:-16809128 MS.gene83075:CDS
GGGACGAAGCCAACACCAGG+TGG 0.658389 1.2:+16809403 None:intergenic
GGAGCTGATAACATGTTGGT+GGG 0.668234 1.2:-16809127 MS.gene83075:CDS
TGTTGGAGCTGATAACATGT+TGG 0.669956 1.2:-16809131 MS.gene83075:CDS
CTGGCGTCATAGCTTCCATG+TGG 0.684588 1.2:+16807894 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTTTTCATTTAATTTTA+TGG - chr1.2:16809237-16809256 MS.gene83075:CDS 10.0%
!! TCGATGATTAATTTATGTAT+TGG - chr1.2:16808291-16808310 MS.gene83075:intron 20.0%
!!! TCGTTTAATTTCAACTTTTT+AGG - chr1.2:16808834-16808853 MS.gene83075:intron 20.0%
!!! TTTTTCATAAATAATTGTGC+AGG - chr1.2:16808327-16808346 MS.gene83075:intron 20.0%
! ATCGATGAAATAATGAATAG+AGG + chr1.2:16808276-16808295 None:intergenic 25.0%
! GAGAAAGATTCAATTCATAT+GGG + chr1.2:16807981-16808000 None:intergenic 25.0%
! TGAGAAAGATTCAATTCATA+TGG + chr1.2:16807982-16808001 None:intergenic 25.0%
!! ATTTTATGGTAGAGACAATA+AGG - chr1.2:16809251-16809270 MS.gene83075:CDS 25.0%
!! CAATTTTTAAATCTCAGTCA+CGG - chr1.2:16808754-16808773 MS.gene83075:intron 25.0%
!! TCTCTTTTTATGTTCTACAT+AGG - chr1.2:16808153-16808172 MS.gene83075:intron 25.0%
AGAAGATCAGCAACATTAAT+TGG + chr1.2:16808905-16808924 None:intergenic 30.0%
ATGTGTATTTGACTGCTATT+GGG - chr1.2:16808662-16808681 MS.gene83075:intron 30.0%
CATCAAAATCATTGATGTTG+TGG + chr1.2:16808724-16808743 None:intergenic 30.0%
CGTGACTGAGATTTAAAAAT+TGG + chr1.2:16808756-16808775 None:intergenic 30.0%
GTTAATGCAGTTATTCTAAC+CGG - chr1.2:16809096-16809115 MS.gene83075:CDS 30.0%
!! CAATGATTTTGATGTCTGTA+AGG - chr1.2:16808730-16808749 MS.gene83075:intron 30.0%
!! GTTTGTTTTTCGTGTTTATC+AGG - chr1.2:16809299-16809318 MS.gene83075:CDS 30.0%
!!! AACCTCTTCATTGTTTTTGT+TGG + chr1.2:16807905-16807924 None:intergenic 30.0%
ACATTCAGTAGCAAAGATTG+AGG + chr1.2:16808999-16809018 None:intergenic 35.0%
ACTTAAGCTTGCAATTATGG+AGG - chr1.2:16809383-16809402 MS.gene83075:CDS 35.0%
AGGACGCAATTAAAACTAAC+TGG - chr1.2:16808187-16808206 MS.gene83075:intron 35.0%
CATGTGTATTTGACTGCTAT+TGG - chr1.2:16808661-16808680 MS.gene83075:intron 35.0%
GAAGAGGTTCAGAATTTCAA+TGG - chr1.2:16807916-16807935 MS.gene83075:CDS 35.0%
GCAACTTAAGCTTGCAATTA+TGG - chr1.2:16809380-16809399 MS.gene83075:CDS 35.0%
TCAATTCATATGGGTCATAC+TGG + chr1.2:16807972-16807991 None:intergenic 35.0%
TGCCAACAAAAACAATGAAG+AGG - chr1.2:16807900-16807919 MS.gene83075:CDS 35.0%
! CACACTTGTGTCAATTTTGT+GGG - chr1.2:16808864-16808883 MS.gene83075:intron 35.0%
! GGCATTGTAAAACTGGATTT+TGG - chr1.2:16808067-16808086 MS.gene83075:intron 35.0%
! TCACACTTGTGTCAATTTTG+TGG - chr1.2:16808863-16808882 MS.gene83075:intron 35.0%
!! CAATGGTTCTGACTTGATTA+AGG - chr1.2:16807933-16807952 MS.gene83075:intron 35.0%
!! GTCAATTTTGTGGGCTAATT+GGG - chr1.2:16808873-16808892 MS.gene83075:intron 35.0%
!! TGTCAATTTTGTGGGCTAAT+TGG - chr1.2:16808872-16808891 MS.gene83075:intron 35.0%
!!! CTTCATTGTTTTTGTTGGCA+AGG + chr1.2:16807900-16807919 None:intergenic 35.0%
!!! TAGTTTTAATTGCGTCCTGA+GGG + chr1.2:16808185-16808204 None:intergenic 35.0%
!!! TTAGTTTTAATTGCGTCCTG+AGG + chr1.2:16808186-16808205 None:intergenic 35.0%
AAAACACGGCAAACCACAAA+AGG + chr1.2:16808355-16808374 None:intergenic 40.0%
AAAATGCCGCGATTGAATGT+GGG - chr1.2:16808698-16808717 MS.gene83075:intron 40.0%
AGGACGTCATTTGAAGAATC+CGG + chr1.2:16809118-16809137 None:intergenic 40.0%
ATGTCACTGAGAAACCTATG+GGG - chr1.2:16808461-16808480 MS.gene83075:intron 40.0%
GATGTCACTGAGAAACCTAT+GGG - chr1.2:16808460-16808479 MS.gene83075:intron 40.0%
GCCTTATCTGATGTTGAAGA+AGG - chr1.2:16808415-16808434 MS.gene83075:intron 40.0%
GCCTTCTTCAACATCAGATA+AGG + chr1.2:16808419-16808438 None:intergenic 40.0%
GCTGTTCGAGAAATTACTGT+TGG - chr1.2:16808102-16808121 MS.gene83075:intron 40.0%
TAAAATGCCGCGATTGAATG+TGG - chr1.2:16808697-16808716 MS.gene83075:intron 40.0%
TAACAAGGAGCTCATCAGAA+GGG + chr1.2:16807870-16807889 None:intergenic 40.0%
TGAAGCAGTAAAACTCCCTT+GGG + chr1.2:16808023-16808042 None:intergenic 40.0%
TGATGTCACTGAGAAACCTA+TGG - chr1.2:16808459-16808478 MS.gene83075:intron 40.0%
TGATTGTGTTGTCTTCCACA+TGG - chr1.2:16809341-16809360 MS.gene83075:CDS 40.0%
TGTTGGAGCTGATAACATGT+TGG - chr1.2:16808119-16808138 MS.gene83075:intron 40.0%
TTGTTAACAAGCCTCAGGTA+TGG - chr1.2:16808229-16808248 MS.gene83075:intron 40.0%
! ATTGCAAGCTTAAGTTGCTC+TGG + chr1.2:16809378-16809397 None:intergenic 40.0%
!!! AGTTTTAATTGCGTCCTGAG+GGG + chr1.2:16808184-16808203 None:intergenic 40.0%
AATCTCAGTCACGGTAACTG+TGG - chr1.2:16808763-16808782 MS.gene83075:intron 45.0%
AGGTGATGCATCGTATTTGC+AGG - chr1.2:16808540-16808559 MS.gene83075:intron 45.0%
AGTAAAACTCCCTTGGGTGA+CGG + chr1.2:16808017-16808036 None:intergenic 45.0%
CACTCTTGTTAACAAGCCTC+AGG - chr1.2:16808224-16808243 MS.gene83075:intron 45.0%
CATATGGGTCATACTGGTAC+AGG + chr1.2:16807966-16807985 None:intergenic 45.0%
CTAACAAGGAGCTCATCAGA+AGG + chr1.2:16807871-16807890 None:intergenic 45.0%
CTACATAGGAAATTCCCCTC+AGG - chr1.2:16808167-16808186 MS.gene83075:intron 45.0%
GGAGCTGATAACATGTTGGT+GGG - chr1.2:16808123-16808142 MS.gene83075:intron 45.0%
GTGAAGCAGTAAAACTCCCT+TGG + chr1.2:16808024-16808043 None:intergenic 45.0%
TGGAGCTGATAACATGTTGG+TGG - chr1.2:16808122-16808141 MS.gene83075:intron 45.0%
TGGCAAGGTAGTAGCTAACA+AGG + chr1.2:16807885-16807904 None:intergenic 45.0%
TGTCACTGAGAAACCTATGG+GGG - chr1.2:16808462-16808481 MS.gene83075:intron 45.0%
TTTCGCAAATGCCATACCTG+AGG + chr1.2:16808243-16808262 None:intergenic 45.0%
! AATTGTGCAGGCTCCTTTTG+TGG - chr1.2:16808339-16808358 MS.gene83075:intron 45.0%
! CTGGTGGGCAATCAAAAACA+CGG + chr1.2:16808369-16808388 None:intergenic 45.0%
! CTTTTTCTTCCGTCACCCAA+GGG - chr1.2:16808005-16808024 MS.gene83075:intron 45.0%
!! CTGAGGAGGCATTGTAAAAC+TGG - chr1.2:16808060-16808079 MS.gene83075:intron 45.0%
!! GTGTTTTTGATTGCCCACCA+GGG - chr1.2:16808368-16808387 MS.gene83075:intron 45.0%
!! AAATTTAAAGAAAAATAAAA+AGG + chr1.2:16809138-16809157 None:intergenic 5.0%
CATCCATATCCATCCCTGGT+GGG + chr1.2:16808384-16808403 None:intergenic 50.0%
CCTCCTCAGCTCATCAACTT+TGG + chr1.2:16808049-16808068 None:intergenic 50.0%
GAATTGCTTCCACCTGGTGT+TGG - chr1.2:16807838-16807857 MS.gene83075:CDS 50.0%
GTTGAAGAAGGCGATGCTAC+TGG - chr1.2:16808427-16808446 MS.gene83075:intron 50.0%
TCACCATCCATATCCATCCC+TGG + chr1.2:16808388-16808407 None:intergenic 50.0%
TTGTGGCCCACATTCAATCG+CGG + chr1.2:16808707-16808726 None:intergenic 50.0%
! CCTTTTTCTTCCGTCACCCA+AGG - chr1.2:16808004-16808023 MS.gene83075:intron 50.0%
!! CCAAAGTTGATGAGCTGAGG+AGG - chr1.2:16808046-16808065 MS.gene83075:intron 50.0%
!! CCTTGGGTGACGGAAGAAAA+AGG + chr1.2:16808007-16808026 None:intergenic 50.0%
!! CGTGTTTTTGATTGCCCACC+AGG - chr1.2:16808367-16808386 MS.gene83075:intron 50.0%
!! CTGCCAAAGTTGATGAGCTG+AGG - chr1.2:16808043-16808062 MS.gene83075:intron 50.0%
!! TTTTGATTGCCCACCAGGGA+TGG - chr1.2:16808372-16808391 MS.gene83075:intron 50.0%
ACTGAGAAACCTATGGGGGC+TGG - chr1.2:16808466-16808485 MS.gene83075:intron 55.0%
CCACCAGGGATGGATATGGA+TGG - chr1.2:16808382-16808401 MS.gene83075:intron 55.0%
CCATCCATATCCATCCCTGG+TGG + chr1.2:16808385-16808404 None:intergenic 55.0%
CTGGCGTCATAGCTTCCATG+TGG + chr1.2:16809359-16809378 None:intergenic 55.0%
TTGCCCACCAGGGATGGATA+TGG - chr1.2:16808378-16808397 MS.gene83075:intron 55.0%
! AAACCTATGGGGGCTGGTGT+TGG - chr1.2:16808472-16808491 MS.gene83075:intron 55.0%
GAAGGGACGAAGCCAACACC+AGG + chr1.2:16807853-16807872 None:intergenic 60.0%
GCATCACCTTGCTCAGCAGC+AGG + chr1.2:16808529-16808548 None:intergenic 60.0%
GCTGATCCTGCTGCTGAGCA+AGG - chr1.2:16808520-16808539 MS.gene83075:intron 60.0%
!! GCTGGTTCTGCTTCTGCTGC+TGG - chr1.2:16808496-16808515 MS.gene83075:intron 60.0%
GCACCAACACCAGCCCCCAT+AGG + chr1.2:16808478-16808497 None:intergenic 65.0%
GGGACGAAGCCAACACCAGG+TGG + chr1.2:16807850-16807869 None:intergenic 65.0%
!! ATGGGGGCTGGTGTTGGTGC+TGG - chr1.2:16808478-16808497 MS.gene83075:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 16807835 16809437 16807835 ID=MS.gene83075
chr1.2 mRNA 16807835 16809437 16807835 ID=MS.gene83075.t1;Parent=MS.gene83075
chr1.2 exon 16809027 16809437 16809027 ID=MS.gene83075.t1.exon1;Parent=MS.gene83075.t1
chr1.2 CDS 16809027 16809437 16809027 ID=cds.MS.gene83075.t1;Parent=MS.gene83075.t1
chr1.2 exon 16807835 16807951 16807835 ID=MS.gene83075.t1.exon2;Parent=MS.gene83075.t1
chr1.2 CDS 16807835 16807951 16807835 ID=cds.MS.gene83075.t1;Parent=MS.gene83075.t1
Gene Sequence

>MS.gene83075

ATGGAATTGCTTCCACCTGGTGTTGGCTTCGTCCCTTCTGATGAGCTCCTTGTTAGCTACTACCTTGCCAACAAAAACAATGAAGAGGTTCAGAATTTCAATGGTTCTGACTTGATTAAGGAGTTGAACCTGTACCAGTATGACCCATATGAATTGAATCTTTCTCAGTCCTTTTTCTTCCGTCACCCAAGGGAGTTTTACTGCTTCACTGCCAAAGTTGATGAGCTGAGGAGGCATTGTAAAACTGGATTTTGGATGCAGAAGAGAGCTGTTCGAGAAATTACTGTTGGAGCTGATAACATGTTGGTGGGAAATAAGTCTCTTTTTATGTTCTACATAGGAAATTCCCCTCAGGACGCAATTAAAACTAACTGGACTATGTACGAGTACACTCTTGTTAACAAGCCTCAGGTATGGCATTTGCGAAAACTAACTTTTCCTCTATTCATTATTTCATCGATGATTAATTTATGTATTGGTAACTACTAACTTTTTTTCATAAATAATTGTGCAGGCTCCTTTTGTGGTTTGCCGTGTTTTTGATTGCCCACCAGGGATGGATATGGATGGTGAGTTCGAAGCCTTATCTGATGTTGAAGAAGGCGATGCTACTGGCGATGACTCTGATGTCACTGAGAAACCTATGGGGGCTGGTGTTGGTGCTGGTTCTGCTTCTGCTGCTGGTGCTGATCCTGCTGCTGAGCAAGGTGATGCATCGTATTTGCAGGTAAAATATATTTCATTTTGATCTCTCTTAATATTTTGTTGTCTGTTAGAATTTAAGAATAGTTGAATGTGTCATAAATCATAATTGTTTTTTGTGTTGCATGTGTATTTGACTGCTATTGGGCATAAATTTTAATAAAATGCCGCGATTGAATGTGGGCCACAACATCAATGATTTTGATGTCTGTAAGGCCAATTTTTAAATCTCAGTCACGGTAACTGTGGCTATTGCATCACAATCATTGATAGTGTAGATAAACTTTATCAAAATTTTCGTTTAATTTCAACTTTTTAGGTTTGATTCACACTTGTGTCAATTTTGTGGGCTAATTGGGAGTCAACCAATTAATGTTGCTGATCTTCTTTGCAATTAATTTTGTAAAATTTCTAAAATTTTACAACTCAATTCATTCATGTGATGATATTTTTTGATTGCCTCAATCTTTGCTACTGAATGTAACATGTCAAAATTTCAATTGTTTTGTTTGTGTTTAGAAATTAAGTGATGATTCTCAAAACATATATCAACTGATTAGTTAATGCAGTTATTCTAACCGGATTCTTCAAATGACGTCCTTTTTATTTTTCTTTAAATTTTTTGTTGTGATAAATTCATTATTATTAATATTATTGTTATTGTTGTCGTCGTTGTTGTTGTTGTCAGTTTTTGACAATGAAACTTTTCATTTAATTTTATGGTAGAGACAATAAGGTATTGCTGAAGTATTGAATTGTTTTGTTTGTTTTTCGTGTTTATCAGGCGAGTTATATTGCATTTCTTGATTGTGTTGTCTTCCACATGGAAGCTATGACGCCAGAGCAACTTAAGCTTGCAATTATGGAGGAAGATTTTATTGAGATTGCTGATTTTGTTTAA
Protein sequence

>MS.gene83075.t1

MELLPPGVGFVPSDELLVSYYLANKNNEEVQNFNGSDLIKELNLYQYDPYELNLSQSFFFRHPREFYCFTAKVDELRRHCKTGFWMQKRAVREITVGADNMLVGNKSLFMFYIGNSPQDAIKTNWTMYEYTLVNKPQASYIAFLDCVVFHMEAMTPEQLKLAIMEEDFIEIADFV