AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene83875

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83875.t1 MTR_6g027370 95.677 347 15 0 1 347 1 347 0.0 619
MS.gene83875.t1 MTR_6g027360 59.026 349 100 10 1 347 1 308 2.48e-117 342
MS.gene83875.t1 MTR_6g027340 51.408 284 59 7 64 347 1 205 4.11e-80 243
MS.gene83875.t1 MTR_7g086960 51.282 312 129 5 57 345 41 352 7.96e-77 240
MS.gene83875.t1 MTR_4g082040 68.333 120 38 0 92 211 98 217 2.30e-56 189
MS.gene83875.t1 MTR_5g041570 58.442 154 60 2 61 214 99 248 3.54e-56 189
MS.gene83875.t1 MTR_6g074860 70.192 104 31 0 99 202 4 107 9.77e-51 169
MS.gene83875.t1 MTR_3g089045 70.909 110 32 0 93 202 10 119 1.19e-50 171
MS.gene83875.t1 MTR_4g019370 54.902 102 46 0 98 199 37 138 7.93e-38 139
MS.gene83875.t1 MTR_4g094982 48.062 129 60 1 98 219 4 132 5.75e-37 134
MS.gene83875.t1 MTR_5g016510 50.467 107 53 0 98 204 4 110 5.31e-36 133
MS.gene83875.t1 MTR_5g082910 52.083 96 46 0 98 193 18 113 4.41e-32 122
MS.gene83875.t1 MTR_6g015455 50.980 102 50 0 98 199 4 105 5.03e-32 127
MS.gene83875.t1 MTR_3g101290 49.020 102 52 0 98 199 36 137 1.35e-31 119
MS.gene83875.t1 MTR_3g110028 45.763 118 63 1 89 206 76 192 2.20e-30 122
MS.gene83875.t1 MTR_1g026870 44.915 118 64 1 89 206 76 192 3.55e-29 119
MS.gene83875.t1 MTR_3g463400 48.039 102 53 0 98 199 132 233 5.93e-28 113
MS.gene83875.t1 MTR_7g061330 46.847 111 58 1 89 199 104 213 7.20e-28 114
MS.gene83875.t1 MTR_7g461410 46.847 111 58 1 89 199 104 213 7.20e-28 114
MS.gene83875.t1 MTR_7g061330 48.039 102 53 0 98 199 76 177 9.59e-28 114
MS.gene83875.t1 MTR_5g070020 36.548 197 108 4 72 258 101 290 1.05e-27 111
MS.gene83875.t1 MTR_5g049190 46.667 105 53 1 98 202 18 119 1.06e-26 106
MS.gene83875.t1 MTR_7g451170 46.078 102 55 0 98 199 190 291 6.97e-26 107
MS.gene83875.t1 MTR_7g037260 44.660 103 57 0 98 200 144 246 9.24e-26 106
MS.gene83875.t1 MTR_2g067420 49.485 97 48 1 99 194 16 112 2.22e-24 102
MS.gene83875.t1 MTR_4g105660 43.137 102 58 0 98 199 179 280 4.43e-24 102
MS.gene83875.t1 MTR_2g097910 44.144 111 61 1 99 208 22 132 6.77e-24 100
MS.gene83875.t1 MTR_3g077650 47.059 102 54 0 98 199 180 281 1.04e-23 101
MS.gene83875.t1 MTR_4g088015 44.554 101 56 0 98 198 220 320 1.38e-23 101
MS.gene83875.t1 MTR_1g057980 35.762 151 93 2 42 192 27 173 1.39e-23 99.4
MS.gene83875.t1 MTR_5g010650 45.192 104 56 1 89 192 101 203 1.57e-23 101
MS.gene83875.t1 MTR_7g037130 46.392 97 52 0 98 194 144 240 2.06e-23 99.8
MS.gene83875.t1 MTR_2g089450 45.098 102 53 2 99 198 14 114 6.05e-23 96.3
MS.gene83875.t1 MTR_4g065017 42.453 106 60 1 99 203 19 124 7.20e-23 97.8
MS.gene83875.t1 MTR_3g052450 42.991 107 60 1 99 204 42 148 9.84e-23 99.4
MS.gene83875.t1 MTR_7g450950 33.143 175 106 3 88 259 146 312 9.91e-23 97.4
MS.gene83875.t1 MTR_3g074520 45.631 103 53 2 99 199 14 115 1.15e-22 97.4
MS.gene83875.t1 MTR_7g035350 45.833 96 52 0 97 192 223 318 1.32e-22 98.6
MS.gene83875.t1 MTR_1g100667 40.351 114 67 1 99 211 15 128 1.93e-22 95.5
MS.gene83875.t1 MTR_5g042030 43.137 102 57 1 99 199 9 110 2.36e-22 95.5
MS.gene83875.t1 MTR_0008s0390 44.118 102 56 1 99 199 15 116 2.38e-22 95.1
MS.gene83875.t1 MTR_3g052430 40.517 116 68 1 99 213 43 158 2.64e-22 98.2
MS.gene83875.t1 MTR_7g110830 41.905 105 60 1 99 202 14 118 3.50e-22 96.3
MS.gene83875.t1 MTR_2g089620 41.880 117 66 2 99 213 14 130 3.61e-22 95.9
MS.gene83875.t1 MTR_6g055910 41.748 103 59 1 99 200 16 118 4.13e-22 94.7
MS.gene83875.t1 MTR_0008s0470 44.118 102 56 1 99 199 15 116 4.49e-22 94.7
MS.gene83875.t1 MTR_7g115650 38.129 139 80 3 99 231 14 152 4.55e-22 92.8
MS.gene83875.t1 MTR_4g063100 42.593 108 59 2 95 200 5 111 5.67e-22 94.0
MS.gene83875.t1 MTR_7g010210 41.176 102 59 1 99 199 14 115 6.51e-22 94.0
MS.gene83875.t1 MTR_7g010210 41.176 102 59 1 99 199 14 115 6.83e-22 95.1
MS.gene83875.t1 MTR_3g028740 41.026 117 67 2 86 201 12 127 1.04e-21 94.7
MS.gene83875.t1 MTR_1g085640 40.952 105 61 1 99 202 14 118 1.12e-21 95.1
MS.gene83875.t1 MTR_8g017440 43.689 103 55 2 99 199 14 115 1.27e-21 94.4
MS.gene83875.t1 MTR_5g029840 42.157 102 58 1 99 199 14 115 1.35e-21 94.4
MS.gene83875.t1 MTR_3g461490 34.483 174 97 4 99 262 14 180 1.36e-21 94.0
MS.gene83875.t1 MTR_0251s0050 43.137 102 57 1 99 199 15 116 1.95e-21 92.8
MS.gene83875.t1 MTR_1g076150 26.172 256 163 5 99 346 14 251 3.04e-21 92.0
MS.gene83875.t1 MTR_2g089420 40.870 115 62 3 99 211 13 123 4.84e-21 94.0
MS.gene83875.t1 MTR_4g105130 41.176 102 59 1 99 199 14 115 4.90e-21 93.2
MS.gene83875.t1 MTR_5g010020 45.263 95 51 1 99 192 14 108 4.92e-21 92.8
MS.gene83875.t1 MTR_8g098860 40.952 105 61 1 99 202 14 118 4.97e-21 92.4
MS.gene83875.t1 MTR_1g085040 40.566 106 60 2 99 202 14 118 6.04e-21 92.8
MS.gene83875.t1 MTR_8g060940 45.000 100 54 1 99 197 9 108 7.15e-21 90.5
MS.gene83875.t1 MTR_4g100720 42.857 112 62 2 90 199 5 116 7.62e-21 88.6
MS.gene83875.t1 MTR_7g087130 33.775 151 92 2 99 248 14 157 8.74e-21 92.0
MS.gene83875.t1 MTR_3g039990 38.679 106 64 1 99 203 15 120 9.21e-21 91.7
MS.gene83875.t1 MTR_6g012180 41.237 97 56 1 99 194 14 110 1.08e-20 91.7
MS.gene83875.t1 MTR_2g011660 43.137 102 57 1 99 199 15 116 1.27e-20 91.7
MS.gene83875.t1 MTR_1g100653 39.252 107 64 1 99 204 14 120 1.30e-20 90.9
MS.gene83875.t1 MTR_7g017260 33.974 156 97 2 99 251 27 179 1.35e-20 90.5
MS.gene83875.t1 MTR_0140s0030 41.121 107 61 2 95 199 10 116 1.41e-20 91.3
MS.gene83875.t1 MTR_0489s0020 41.121 107 61 2 95 199 10 116 1.41e-20 91.3
MS.gene83875.t1 MTR_2g064160 41.748 103 57 2 99 199 13 114 1.52e-20 90.9
MS.gene83875.t1 MTR_7g111290 46.809 94 47 2 99 190 14 106 1.82e-20 91.7
MS.gene83875.t1 MTR_4g091490 44.118 102 56 1 99 199 15 116 2.06e-20 91.3
MS.gene83875.t1 MTR_4g082230 42.157 102 58 1 99 199 14 115 2.07e-20 91.7
MS.gene83875.t1 MTR_1g110460 32.370 173 107 4 80 244 6 176 2.11e-20 90.5
MS.gene83875.t1 MTR_1g112760 40.777 103 58 2 99 199 15 116 2.48e-20 88.6
MS.gene83875.t1 MTR_8g042410 34.483 145 91 2 64 204 1 145 2.49e-20 92.4
MS.gene83875.t1 MTR_5g079220 42.157 102 58 1 99 199 23 124 2.84e-20 89.7
MS.gene83875.t1 MTR_6g012690 29.344 259 142 6 99 344 14 244 3.32e-20 90.5
MS.gene83875.t1 MTR_8g017540 32.124 193 98 6 99 273 60 237 3.73e-20 90.9
MS.gene83875.t1 MTR_5g014990 42.718 103 57 2 99 199 14 116 4.50e-20 89.7
MS.gene83875.t1 MTR_7g096930 39.669 121 68 2 99 214 14 134 5.48e-20 89.0
MS.gene83875.t1 MTR_4g082290 42.157 102 58 1 99 199 14 115 5.53e-20 90.5
MS.gene83875.t1 MTR_2g096380 41.509 106 59 2 99 202 8 112 6.28e-20 87.8
MS.gene83875.t1 MTR_3g077110 40.777 103 58 2 99 199 14 115 8.53e-20 89.4
MS.gene83875.t1 MTR_1g017000 28.163 245 139 8 99 341 14 223 8.59e-20 87.8
MS.gene83875.t1 MTR_8g095390 40.196 102 60 1 99 199 14 115 1.16e-19 88.6
MS.gene83875.t1 MTR_2g099740 41.748 103 57 2 99 199 14 115 1.24e-19 89.4
MS.gene83875.t1 MTR_7g117730 41.176 102 59 1 99 199 14 115 1.30e-19 87.4
MS.gene83875.t1 MTR_0001s0360 41.176 102 59 1 99 199 9 110 1.48e-19 87.0
MS.gene83875.t1 MTR_5g078950 40.777 103 60 1 93 194 3 105 1.49e-19 87.4
MS.gene83875.t1 MTR_8g017340 41.748 103 58 1 99 199 14 116 1.50e-19 89.7
MS.gene83875.t1 MTR_5g079670 42.718 103 56 2 99 199 13 114 1.64e-19 85.9
MS.gene83875.t1 MTR_4g125520 40.566 106 62 1 99 203 14 119 1.95e-19 87.8
MS.gene83875.t1 MTR_7g061550 37.719 114 68 1 99 209 7 120 2.11e-19 88.6
MS.gene83875.t1 MTR_5g078860 42.157 102 58 1 99 199 9 110 2.25e-19 87.4
MS.gene83875.t1 MTR_4g073420 42.157 102 58 1 99 199 14 115 2.71e-19 87.0
MS.gene83875.t1 MTR_3g011610 40.367 109 60 2 99 204 39 145 2.82e-19 89.0
MS.gene83875.t1 MTR_1g083630 42.453 106 59 2 99 203 14 118 3.00e-19 89.4
MS.gene83875.t1 MTR_8g027345 40.385 104 61 1 99 201 14 117 3.19e-19 87.0
MS.gene83875.t1 MTR_5g007370 40.187 107 61 2 99 203 14 119 3.54e-19 87.0
MS.gene83875.t1 MTR_4g478180 40.187 107 61 2 99 203 15 120 3.65e-19 87.8
MS.gene83875.t1 MTR_6g009430 42.157 102 58 1 99 199 14 115 3.67e-19 87.4
MS.gene83875.t1 MTR_8g017500 40.777 103 58 2 99 199 14 115 4.25e-19 87.4
MS.gene83875.t1 MTR_5g079290 40.196 102 60 1 99 199 19 120 4.35e-19 85.9
MS.gene83875.t1 MTR_2g088170 39.231 130 75 3 77 204 10 137 4.63e-19 88.2
MS.gene83875.t1 MTR_1g062940 39.806 103 59 2 99 199 8 109 4.65e-19 85.1
MS.gene83875.t1 MTR_1g043080 41.176 102 59 1 99 199 14 115 4.66e-19 85.9
MS.gene83875.t1 MTR_0008s0280 41.237 97 54 2 99 193 14 109 4.80e-19 85.1
MS.gene83875.t1 MTR_5g078800 41.176 102 59 1 99 199 9 110 5.08e-19 85.9
MS.gene83875.t1 MTR_8g017390 41.748 103 58 1 99 199 14 116 6.58e-19 87.8
MS.gene83875.t1 MTR_1g086530 35.537 121 75 2 93 211 29 148 6.87e-19 85.9
MS.gene83875.t1 MTR_3g103570 41.748 103 58 2 99 199 14 116 7.96e-19 86.7
MS.gene83875.t1 MTR_5g078910 40.196 102 60 1 99 199 9 110 1.18e-18 85.5
MS.gene83875.t1 MTR_7g011170 39.216 102 61 1 99 199 14 115 1.19e-18 85.5
MS.gene83875.t1 MTR_3g097450 40.196 102 60 1 99 199 14 115 1.26e-18 85.5
MS.gene83875.t1 MTR_1g021230 38.462 104 63 1 99 201 59 162 1.43e-18 86.7
MS.gene83875.t1 MTR_4g097570 44.330 97 51 2 99 192 14 110 1.51e-18 85.1
MS.gene83875.t1 MTR_6g055910 49.275 69 35 0 132 200 21 89 1.64e-18 84.3
MS.gene83875.t1 MTR_1g043050 34.667 150 85 4 99 241 14 157 1.64e-18 84.3
MS.gene83875.t1 MTR_8g017350 41.748 103 58 1 99 199 14 116 1.68e-18 87.0
MS.gene83875.t1 MTR_0063s0090 36.134 119 68 3 99 210 14 131 1.71e-18 83.6
MS.gene83875.t1 MTR_0197s0010 36.364 132 78 3 102 228 6 136 1.96e-18 83.6
MS.gene83875.t1 MTR_5g062790 38.462 117 70 2 99 213 11 127 2.52e-18 84.7
MS.gene83875.t1 MTR_1g073170 36.975 119 65 3 92 201 8 125 2.89e-18 83.6
MS.gene83875.t1 MTR_1g017140 40.777 103 59 2 99 199 14 116 3.18e-18 84.7
MS.gene83875.t1 MTR_8g020490 42.157 102 58 1 99 199 10 111 3.35e-18 83.2
MS.gene83875.t1 MTR_4g029540 40.000 105 61 2 99 201 12 116 3.42e-18 84.0
MS.gene83875.t1 MTR_4g485530 41.748 103 57 2 99 199 14 115 3.71e-18 81.6
MS.gene83875.t1 MTR_1g086510 33.824 136 88 2 77 211 2 136 3.76e-18 83.6
MS.gene83875.t1 MTR_5g088080 40.952 105 57 3 99 201 14 115 4.34e-18 83.2
MS.gene83875.t1 MTR_5g088150 40.952 105 57 3 99 201 14 115 4.34e-18 83.2
MS.gene83875.t1 MTR_5g488210 40.952 105 57 3 99 201 14 115 4.34e-18 83.2
MS.gene83875.t1 MTR_8g006470 40.187 107 62 2 99 203 12 118 4.48e-18 83.6
MS.gene83875.t1 MTR_5g488170 40.952 105 57 3 99 201 14 115 5.02e-18 82.8
MS.gene83875.t1 MTR_5g088640 40.952 105 57 3 99 201 14 115 5.75e-18 83.2
MS.gene83875.t1 MTR_5g079120 33.548 155 93 4 99 252 63 208 7.44e-18 83.2
MS.gene83875.t1 MTR_7g076740 38.889 108 62 3 99 203 14 120 8.00e-18 83.2
MS.gene83875.t1 MTR_1g045610 40.000 105 60 2 99 201 23 126 8.75e-18 82.4
MS.gene83875.t1 MTR_4g097570 43.750 96 52 2 99 192 14 109 9.79e-18 82.8
MS.gene83875.t1 MTR_0247s0040 42.718 103 58 1 91 192 1 103 1.15e-17 80.1
MS.gene83875.t1 MTR_7g035075 35.965 114 72 1 99 211 16 129 1.33e-17 80.5
MS.gene83875.t1 MTR_3g083540 39.216 102 61 1 99 199 43 144 1.41e-17 82.4
MS.gene83875.t1 MTR_4g057635 37.607 117 70 3 99 212 14 130 1.61e-17 82.4
MS.gene83875.t1 MTR_3g065440 39.252 107 62 2 99 203 14 119 2.08e-17 82.0
MS.gene83875.t1 MTR_4g128670 41.837 98 55 2 99 194 14 111 2.49e-17 82.4
MS.gene83875.t1 MTR_7g102110 36.842 114 70 2 99 210 14 127 2.63e-17 81.3
MS.gene83875.t1 MTR_5g088610 29.255 188 130 3 99 283 11 198 3.02e-17 82.0
MS.gene83875.t1 MTR_5g078140 39.252 107 62 2 99 203 14 119 3.47e-17 81.6
MS.gene83875.t1 MTR_2g033170 36.842 114 71 1 99 211 26 139 3.63e-17 81.6
MS.gene83875.t1 MTR_5g078930 37.963 108 66 1 93 199 5 112 4.04e-17 79.7
MS.gene83875.t1 MTR_2g034790 30.719 153 104 2 99 250 14 165 4.62e-17 81.3
MS.gene83875.t1 MTR_2g095520 40.816 98 56 2 99 194 14 111 7.42e-17 80.5
MS.gene83875.t1 MTR_8g031360 38.462 104 60 3 99 199 15 117 8.27e-17 80.1
MS.gene83875.t1 MTR_4g102380 39.806 103 59 2 99 199 14 115 8.99e-17 79.7
MS.gene83875.t1 MTR_4g123040 36.842 114 71 1 99 211 26 139 1.45e-16 79.7
MS.gene83875.t1 MTR_7g111290 57.627 59 25 0 132 190 6 64 1.75e-16 79.7
MS.gene83875.t1 MTR_4g121460 36.364 110 69 1 99 207 14 123 1.80e-16 79.7
MS.gene83875.t1 MTR_6g006030 36.792 106 66 1 99 203 16 121 3.07e-16 77.0
MS.gene83875.t1 MTR_0193s0090 29.577 213 130 5 91 294 1 202 4.94e-16 76.3
MS.gene83875.t1 MTR_4g063100 45.070 71 39 0 132 202 14 84 1.20e-15 75.5
MS.gene83875.t1 MTR_6g090405 39.806 103 60 2 99 199 14 116 1.66e-15 75.9
MS.gene83875.t1 MTR_8g468380 28.777 139 93 2 83 216 1 138 3.23e-15 76.6
MS.gene83875.t1 MTR_2g096380 43.662 71 40 0 132 202 23 93 1.00e-14 72.8
MS.gene83875.t1 MTR_3g045430 34.906 106 68 1 99 203 15 120 2.08e-14 73.2
MS.gene83875.t1 MTR_5g038910 30.702 114 77 1 102 215 29 140 4.16e-14 73.6
MS.gene83875.t1 MTR_5g038910 30.702 114 77 1 102 215 29 140 5.09e-14 72.8
MS.gene83875.t1 MTR_5g007300 44.000 75 41 1 99 172 66 140 5.60e-14 68.9
MS.gene83875.t1 MTR_6g080360 34.737 95 61 1 98 192 478 571 5.94e-14 73.6
MS.gene83875.t1 MTR_6g080360 34.737 95 61 1 98 192 258 351 9.57e-14 72.8
MS.gene83875.t1 MTR_7g109320 39.216 102 61 1 99 199 14 115 1.36e-12 68.6
MS.gene83875.t1 MTR_7g115550 32.990 97 64 1 100 196 8 103 5.07e-12 67.4
MS.gene83875.t1 MTR_1g008970 40.278 72 42 1 118 189 111 181 5.27e-12 65.5
MS.gene83875.t1 MTR_7g115550 32.990 97 64 1 100 196 8 103 6.58e-12 67.4
MS.gene83875.t1 MTR_4g128190 45.070 71 35 2 132 201 34 101 1.44e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83875.t1 AT1G69560 51.892 185 76 3 99 273 107 288 6.96e-57 188
MS.gene83875.t1 AT1G69560 51.892 185 76 3 99 273 123 304 9.69e-57 188
MS.gene83875.t1 AT1G26780 39.338 272 128 6 99 345 98 357 4.39e-55 184
MS.gene83875.t1 AT1G17950 40.079 252 135 7 99 347 5 243 4.76e-55 181
MS.gene83875.t1 AT1G26780 65.873 126 42 1 99 224 98 222 1.87e-53 177
MS.gene83875.t1 AT4G33450 40.541 259 129 8 91 345 10 247 2.63e-52 174
MS.gene83875.t1 AT5G17800 38.629 321 128 12 52 345 43 321 1.36e-51 174
MS.gene83875.t1 AT3G29020 63.248 117 43 0 94 210 60 176 1.99e-48 163
MS.gene83875.t1 AT1G73410 72.115 104 29 0 99 202 6 109 2.98e-48 163
MS.gene83875.t1 AT1G73410 72.115 104 29 0 99 202 6 109 4.31e-48 161
MS.gene83875.t1 AT3G29020 63.248 117 43 0 94 210 62 178 1.21e-47 163
MS.gene83875.t1 AT3G55730 55.660 106 47 0 98 203 55 160 3.51e-36 135
MS.gene83875.t1 AT5G39700 60.606 99 39 0 100 198 57 155 3.76e-36 130
MS.gene83875.t1 AT2G39880 54.054 111 51 0 92 202 43 153 7.33e-35 131
MS.gene83875.t1 AT5G67300 52.941 102 48 0 98 199 5 106 1.85e-34 129
MS.gene83875.t1 AT4G37260 53.922 102 47 0 98 199 12 113 2.03e-34 129
MS.gene83875.t1 AT3G50060 49.020 102 52 0 98 199 5 106 7.14e-33 124
MS.gene83875.t1 AT3G09230 51.961 102 49 0 98 199 54 155 1.00e-32 125
MS.gene83875.t1 AT2G23290 50.980 102 50 0 98 199 12 113 6.22e-32 122
MS.gene83875.t1 AT3G09370 50.000 102 51 0 98 199 134 235 2.05e-29 118
MS.gene83875.t1 AT3G09370 50.000 102 51 0 98 199 129 230 2.26e-29 118
MS.gene83875.t1 AT3G09370 50.000 102 51 0 98 199 142 243 3.31e-29 118
MS.gene83875.t1 AT5G02320 35.079 191 114 3 98 278 66 256 4.30e-29 117
MS.gene83875.t1 AT5G02320 35.079 191 114 3 98 278 126 316 4.53e-29 117
MS.gene83875.t1 AT5G02320 35.079 191 114 3 98 278 126 316 4.53e-29 117
MS.gene83875.t1 AT5G11510 42.373 118 67 1 89 206 72 188 3.80e-28 115
MS.gene83875.t1 AT5G11510 42.373 118 67 1 89 206 72 188 3.80e-28 115
MS.gene83875.t1 AT5G11510 42.373 118 67 1 89 206 72 188 3.80e-28 115
MS.gene83875.t1 AT5G11510 42.373 118 67 1 89 206 72 188 7.15e-28 115
MS.gene83875.t1 AT5G11510 43.119 109 62 0 98 206 80 188 7.50e-28 115
MS.gene83875.t1 AT4G32730 43.243 111 62 1 89 199 78 187 9.52e-27 112
MS.gene83875.t1 AT4G32730 43.243 111 62 1 89 199 78 187 9.52e-27 112
MS.gene83875.t1 AT4G32730 43.243 111 62 1 89 199 78 187 9.52e-27 112
MS.gene83875.t1 AT4G32730 43.243 111 62 1 89 199 78 187 9.52e-27 112
MS.gene83875.t1 AT4G32730 43.243 111 62 1 89 199 78 187 9.67e-27 111
MS.gene83875.t1 AT5G11050 48.039 102 53 0 98 199 104 205 3.95e-26 108
MS.gene83875.t1 AT5G58850 42.500 120 69 0 80 199 86 205 7.88e-26 107
MS.gene83875.t1 AT3G48920 44.715 123 57 3 72 193 3 115 9.54e-25 101
MS.gene83875.t1 AT5G40360 43.590 117 61 2 99 215 158 269 1.04e-24 103
MS.gene83875.t1 AT2G25230 44.554 101 54 2 101 200 28 127 6.49e-24 98.6
MS.gene83875.t1 AT3G27785 36.806 144 85 2 98 238 188 328 1.03e-23 101
MS.gene83875.t1 AT1G18570 44.118 102 56 1 99 199 15 116 1.40e-23 100
MS.gene83875.t1 AT1G79180 46.078 102 54 1 99 199 16 117 1.53e-23 99.0
MS.gene83875.t1 AT4G25560 46.078 102 54 1 99 199 12 113 2.71e-23 98.2
MS.gene83875.t1 AT3G12720 40.476 126 71 3 76 199 2 125 2.97e-23 98.6
MS.gene83875.t1 AT3G53200 45.192 104 54 2 99 200 11 113 3.35e-23 97.1
MS.gene83875.t1 AT5G14750 37.415 147 80 4 99 237 18 160 3.89e-23 95.9
MS.gene83875.t1 AT4G26930 41.121 107 62 1 99 204 21 127 4.84e-23 99.4
MS.gene83875.t1 AT5G62470 40.000 105 63 0 99 203 14 118 6.22e-23 98.2
MS.gene83875.t1 AT4G28110 45.631 103 53 2 99 199 14 115 6.73e-23 97.1
MS.gene83875.t1 AT5G54230 45.098 102 55 1 99 199 14 115 7.56e-23 97.4
MS.gene83875.t1 AT3G11440 42.056 107 61 1 99 204 43 149 8.25e-23 99.8
MS.gene83875.t1 AT3G11440 42.056 107 61 1 99 204 43 149 8.25e-23 99.8
MS.gene83875.t1 AT3G11440 42.056 107 61 1 99 204 43 149 8.25e-23 99.8
MS.gene83875.t1 AT3G11440 42.056 107 61 1 99 204 43 149 1.01e-22 99.0
MS.gene83875.t1 AT4G01680 42.308 104 59 1 99 201 14 117 1.21e-22 95.5
MS.gene83875.t1 AT4G17785 44.860 107 56 2 99 203 15 120 1.22e-22 97.4
MS.gene83875.t1 AT4G17785 44.860 107 56 2 99 203 15 120 1.30e-22 97.4
MS.gene83875.t1 AT3G23250 37.931 145 76 2 99 242 14 145 1.68e-22 95.9
MS.gene83875.t1 AT5G40330 44.118 102 56 1 99 199 14 115 1.99e-22 94.4
MS.gene83875.t1 AT4G18770 43.137 102 58 0 98 199 216 317 2.06e-22 97.8
MS.gene83875.t1 AT4G01680 42.308 104 59 1 99 201 14 117 2.74e-22 96.3
MS.gene83875.t1 AT3G47600 32.121 165 106 2 99 257 14 178 3.76e-22 95.9
MS.gene83875.t1 AT1G63910 42.105 114 65 1 99 211 14 127 4.65e-22 96.3
MS.gene83875.t1 AT4G05100 44.118 102 56 1 99 199 15 116 4.94e-22 95.5
MS.gene83875.t1 AT3G27920 40.171 117 63 2 84 199 7 117 8.71e-22 92.8
MS.gene83875.t1 AT1G56160 43.689 103 55 2 99 199 16 117 1.15e-21 94.0
MS.gene83875.t1 AT5G52600 40.000 120 66 2 81 199 1 115 1.20e-21 91.7
MS.gene83875.t1 AT5G06100 41.121 107 62 1 99 204 34 140 1.71e-21 95.9
MS.gene83875.t1 AT5G06100 41.121 107 62 1 99 204 34 140 1.71e-21 95.9
MS.gene83875.t1 AT5G06100 41.121 107 62 1 99 204 34 140 1.71e-21 95.9
MS.gene83875.t1 AT5G06100 41.121 107 62 1 99 204 34 140 1.71e-21 95.9
MS.gene83875.t1 AT5G06100 41.346 104 60 1 99 201 34 137 1.74e-21 95.5
MS.gene83875.t1 AT5G52260 46.552 116 55 3 99 208 14 128 1.80e-21 92.8
MS.gene83875.t1 AT5G62470 39.623 106 63 1 99 203 14 119 2.13e-21 94.0
MS.gene83875.t1 AT5G10280 44.660 103 54 2 99 199 14 115 2.34e-21 93.6
MS.gene83875.t1 AT5G12870 39.623 106 63 1 99 203 20 125 2.34e-21 92.8
MS.gene83875.t1 AT1G74080 45.263 95 51 1 99 192 14 108 2.45e-21 93.6
MS.gene83875.t1 AT5G65230 45.631 103 53 2 99 199 14 115 2.77e-21 93.2
MS.gene83875.t1 AT1G57560 34.641 153 82 3 99 234 14 165 2.79e-21 92.4
MS.gene83875.t1 AT3G02940 44.118 102 56 1 99 199 14 115 2.91e-21 93.2
MS.gene83875.t1 AT2G26960 43.269 104 58 1 99 201 22 125 2.95e-21 94.4
MS.gene83875.t1 AT5G60890 40.000 105 62 1 99 202 14 118 3.10e-21 92.8
MS.gene83875.t1 AT4G01680 39.655 116 57 2 99 201 14 129 3.65e-21 93.2
MS.gene83875.t1 AT3G02940 44.118 102 56 1 99 199 14 115 4.65e-21 92.8
MS.gene83875.t1 AT3G02940 44.118 102 56 1 99 199 14 115 4.65e-21 92.8
MS.gene83875.t1 AT3G08500 41.346 104 60 1 99 201 32 135 5.04e-21 92.8
MS.gene83875.t1 AT2G32460 41.346 104 60 1 99 201 20 123 5.19e-21 94.4
MS.gene83875.t1 AT2G32460 41.346 104 60 1 99 201 8 111 5.79e-21 94.0
MS.gene83875.t1 AT2G26950 35.484 124 68 3 83 201 2 118 5.97e-21 93.2
MS.gene83875.t1 AT3G01140 41.176 102 59 1 99 199 14 115 6.60e-21 92.4
MS.gene83875.t1 AT5G16770 42.453 106 60 1 99 203 14 119 8.42e-21 92.0
MS.gene83875.t1 AT5G16770 42.453 106 60 1 99 203 14 119 8.42e-21 92.0
MS.gene83875.t1 AT3G30210 39.669 121 66 2 99 212 29 149 8.50e-21 91.3
MS.gene83875.t1 AT1G74430 41.176 102 59 1 99 199 14 115 9.17e-21 90.9
MS.gene83875.t1 AT3G01140 41.176 102 59 1 99 199 57 158 9.37e-21 92.8
MS.gene83875.t1 AT4G38620 34.868 152 92 2 99 249 14 159 9.38e-21 91.3
MS.gene83875.t1 AT5G57620 39.831 118 69 2 99 214 14 131 9.88e-21 92.0
MS.gene83875.t1 AT2G47190 40.000 110 65 1 99 207 22 131 1.09e-20 90.9
MS.gene83875.t1 AT1G34670 44.118 102 56 1 99 199 14 115 1.13e-20 92.0
MS.gene83875.t1 AT5G15310 41.748 103 57 2 99 199 14 115 1.16e-20 91.7
MS.gene83875.t1 AT5G15310 41.748 103 57 2 99 199 14 115 1.27e-20 91.3
MS.gene83875.t1 AT5G16770 42.453 106 60 1 99 203 14 119 1.49e-20 91.3
MS.gene83875.t1 AT5G16770 42.453 106 60 1 99 203 14 119 1.49e-20 91.3
MS.gene83875.t1 AT1G16490 44.118 102 56 1 99 199 16 117 1.56e-20 90.5
MS.gene83875.t1 AT5G07700 42.157 102 58 1 99 199 14 115 1.87e-20 91.3
MS.gene83875.t1 AT5G07700 42.157 102 58 1 99 199 14 115 1.87e-20 91.3
MS.gene83875.t1 AT4G21440 44.118 102 56 1 99 199 14 115 1.98e-20 91.3
MS.gene83875.t1 AT3G13890 39.640 111 57 2 99 199 14 124 2.17e-20 91.3
MS.gene83875.t1 AT5G61420 40.952 105 61 1 99 202 14 118 2.19e-20 91.3
MS.gene83875.t1 AT5G07690 42.574 101 57 1 99 198 14 114 2.24e-20 90.9
MS.gene83875.t1 AT1G74650 40.196 102 60 1 99 199 14 115 2.25e-20 90.9
MS.gene83875.t1 AT3G28910 41.176 102 59 1 99 199 14 115 2.49e-20 90.5
MS.gene83875.t1 AT5G15310 41.748 103 57 2 99 199 14 115 3.19e-20 89.0
MS.gene83875.t1 AT3G46130 40.769 130 66 4 81 208 1 121 3.31e-20 89.0
MS.gene83875.t1 AT5G14340 41.121 107 60 2 99 203 26 131 3.37e-20 89.4
MS.gene83875.t1 AT1G08810 41.176 102 59 1 99 199 14 115 3.47e-20 89.4
MS.gene83875.t1 AT5G59780 41.509 106 59 2 99 202 10 114 3.87e-20 88.2
MS.gene83875.t1 AT3G12820 41.748 103 57 2 99 199 16 117 4.22e-20 88.2
MS.gene83875.t1 AT3G13890 40.196 102 60 1 99 199 14 115 4.39e-20 90.5
MS.gene83875.t1 AT1G57560 41.748 103 57 2 99 199 14 115 5.90e-20 89.4
MS.gene83875.t1 AT5G26660 41.905 105 58 2 99 201 14 117 6.50e-20 89.7
MS.gene83875.t1 AT1G68320 39.623 106 63 1 99 203 21 126 9.36e-20 88.2
MS.gene83875.t1 AT2G31180 41.176 102 59 1 99 199 14 115 1.15e-19 87.4
MS.gene83875.t1 AT5G56110 43.137 102 57 1 99 199 14 115 1.20e-19 88.6
MS.gene83875.t1 AT1G25340 39.623 106 63 1 99 203 20 125 1.79e-19 87.4
MS.gene83875.t1 AT1G25340 40.000 105 59 1 99 203 20 120 1.83e-19 87.4
MS.gene83875.t1 AT1G09540 41.509 106 59 2 99 202 14 118 2.04e-19 88.6
MS.gene83875.t1 AT1G25340 40.000 105 59 1 99 203 20 120 2.28e-19 87.8
MS.gene83875.t1 AT1G18710 38.235 102 62 1 99 199 14 115 2.47e-19 86.7
MS.gene83875.t1 AT1G35515 40.196 102 60 1 99 199 14 115 2.54e-19 85.5
MS.gene83875.t1 AT4G00540 36.607 112 68 1 99 207 103 214 2.55e-19 88.6
MS.gene83875.t1 AT5G55020 39.252 107 64 1 99 204 28 134 2.61e-19 89.4
MS.gene83875.t1 AT5G65790 42.718 103 57 2 99 199 14 116 2.73e-19 88.2
MS.gene83875.t1 AT5G40430 36.036 111 70 1 99 209 54 163 3.54e-19 86.3
MS.gene83875.t1 AT1G79180 34.815 135 54 1 99 199 16 150 3.61e-19 87.4
MS.gene83875.t1 AT4G00540 36.607 112 68 1 99 207 101 212 4.10e-19 88.2
MS.gene83875.t1 AT3G49690 43.689 103 56 2 99 199 14 116 4.55e-19 86.7
MS.gene83875.t1 AT5G49620 34.043 141 92 1 72 211 1 141 5.54e-19 86.7
MS.gene83875.t1 AT1G22640 42.157 102 58 1 99 199 14 115 6.16e-19 85.5
MS.gene83875.t1 AT5G16600 32.370 173 102 4 99 269 14 173 7.56e-19 86.7
MS.gene83875.t1 AT5G14750 38.938 113 58 3 132 237 18 126 9.99e-19 82.8
MS.gene83875.t1 AT3G60460 40.187 107 62 2 99 203 13 119 1.06e-18 85.5
MS.gene83875.t1 AT5G35550 45.263 95 51 1 99 192 16 110 1.13e-18 84.7
MS.gene83875.t1 AT4G09460 39.216 102 61 1 99 199 14 115 1.55e-18 84.0
MS.gene83875.t1 AT2G16720 40.196 102 60 1 99 199 14 115 2.61e-18 84.0
MS.gene83875.t1 AT3G28470 44.211 95 52 1 99 192 14 108 2.72e-18 84.7
MS.gene83875.t1 AT1G48000 37.719 114 70 1 99 211 34 147 2.74e-18 83.6
MS.gene83875.t1 AT5G23000 40.777 103 59 2 99 199 14 116 3.43e-18 84.7
MS.gene83875.t1 AT3G53200 52.174 69 33 0 132 200 12 80 3.81e-18 82.0
MS.gene83875.t1 AT3G13540 38.889 108 64 2 94 199 19 126 3.97e-18 83.2
MS.gene83875.t1 AT4G34990 41.176 102 59 1 99 199 14 115 4.05e-18 83.6
MS.gene83875.t1 AT1G66230 39.252 107 62 2 99 203 14 119 7.94e-18 82.8
MS.gene83875.t1 AT5G49330 40.196 102 60 1 99 199 14 115 1.23e-17 83.2
MS.gene83875.t1 AT4G12350 34.752 141 88 3 99 237 14 152 1.51e-17 82.0
MS.gene83875.t1 AT3G18100 43.182 88 50 0 99 186 546 633 1.56e-17 84.3
MS.gene83875.t1 AT3G18100 32.292 96 63 2 98 192 494 588 4.59e-11 64.7
MS.gene83875.t1 AT3G18100 43.182 88 50 0 99 186 498 585 1.57e-17 84.3
MS.gene83875.t1 AT3G18100 32.292 96 63 2 98 192 446 540 3.90e-11 64.7
MS.gene83875.t1 AT5G40350 41.053 95 55 1 99 192 19 113 1.58e-17 80.5
MS.gene83875.t1 AT2G02820 38.000 100 62 0 102 201 33 132 1.98e-17 82.4
MS.gene83875.t1 AT2G02820 36.585 123 69 1 102 215 33 155 2.10e-17 83.6
MS.gene83875.t1 AT1G66370 37.143 105 65 1 99 202 10 114 2.10e-17 80.9
MS.gene83875.t1 AT3G61250 37.864 103 61 2 99 199 14 115 2.18e-17 82.0
MS.gene83875.t1 AT3G01530 40.594 101 59 1 99 198 27 127 2.24e-17 80.1
MS.gene83875.t1 AT1G06180 40.777 103 58 2 99 199 14 115 2.27e-17 80.9
MS.gene83875.t1 AT2G02820 36.585 123 69 1 102 215 33 155 2.38e-17 83.2
MS.gene83875.t1 AT3G18100 43.182 88 50 0 99 186 333 420 2.56e-17 83.6
MS.gene83875.t1 AT3G18100 32.292 96 63 2 98 192 281 375 6.94e-11 63.9
MS.gene83875.t1 AT3G18100 43.182 88 50 0 99 186 385 472 2.70e-17 83.6
MS.gene83875.t1 AT3G18100 32.292 96 63 2 98 192 333 427 8.01e-11 63.9
MS.gene83875.t1 AT3G24310 37.391 115 69 2 99 211 20 133 2.72e-17 81.3
MS.gene83875.t1 AT3G27810 37.168 113 68 2 99 208 22 134 4.15e-17 79.7
MS.gene83875.t1 AT3G12820 50.000 68 34 0 132 199 2 69 4.48e-17 79.0
MS.gene83875.t1 AT3G06490 35.965 114 72 1 99 211 21 134 4.82e-17 81.3
MS.gene83875.t1 AT4G13480 39.048 105 61 2 99 201 8 111 7.44e-17 79.7
MS.gene83875.t1 AT1G56650 33.758 157 97 3 92 244 3 156 1.07e-16 79.0
MS.gene83875.t1 AT2G37630 37.383 107 64 1 99 202 4 110 2.10e-16 79.7
MS.gene83875.t1 AT4G37780 38.532 109 62 3 99 205 14 119 2.35e-16 79.0
MS.gene83875.t1 AT5G26660 46.835 79 41 1 124 201 8 86 2.70e-16 79.0
MS.gene83875.t1 AT4G22680 40.777 103 58 2 99 199 14 115 2.84e-16 78.2
MS.gene83875.t1 AT2G47460 35.000 120 77 1 99 217 14 133 3.52e-16 79.3
MS.gene83875.t1 AT2G36890 40.777 103 59 2 99 199 55 157 5.63e-16 78.2
MS.gene83875.t1 AT2G36890 40.777 103 59 2 99 199 14 116 5.67e-16 77.8
MS.gene83875.t1 AT5G59780 46.479 71 38 0 132 202 23 93 6.62e-16 76.3
MS.gene83875.t1 AT1G66380 38.532 109 66 1 92 199 3 111 9.85e-16 73.6
MS.gene83875.t1 AT3G46130 44.156 77 43 0 132 208 23 99 1.13e-15 75.9
MS.gene83875.t1 AT3G46130 44.156 77 43 0 132 208 13 89 1.21e-15 75.5
MS.gene83875.t1 AT3G62610 37.255 102 63 1 99 199 14 115 1.26e-15 77.4
MS.gene83875.t1 AT5G62320 38.182 110 58 3 99 199 15 123 1.61e-15 75.5
MS.gene83875.t1 AT5G49620 30.968 155 92 2 72 211 1 155 1.63e-15 76.6
MS.gene83875.t1 AT1G14350 35.000 100 65 0 102 201 28 127 1.96e-15 77.4
MS.gene83875.t1 AT1G14350 35.000 100 65 0 102 201 28 127 1.96e-15 77.4
MS.gene83875.t1 AT3G47600 44.444 72 40 0 132 203 42 113 2.23e-15 76.3
MS.gene83875.t1 AT5G35550 55.738 61 27 0 132 192 53 113 6.09e-15 74.3
MS.gene83875.t1 AT1G66390 38.182 110 67 1 92 200 3 112 6.26e-15 73.9
MS.gene83875.t1 AT5G40350 49.180 61 31 0 132 192 8 68 6.67e-15 72.0
MS.gene83875.t1 AT3G27810 41.772 79 44 1 132 208 7 85 1.45e-14 71.6
MS.gene83875.t1 AT1G09770 31.655 139 87 4 100 234 8 142 1.08e-11 66.6
MS.gene83875.t1 AT5G14750 34.314 102 56 3 143 237 2 99 1.93e-11 61.6
MS.gene83875.t1 AT5G14750 34.314 102 56 3 143 237 2 99 1.93e-11 61.6
MS.gene83875.t1 AT1G66380 47.826 69 36 0 132 200 11 79 2.07e-11 60.5

Find 74 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACAATGAATCAATTT+TGG 0.098317 6.1:+9387325 MS.gene83875:CDS
TTCATCTTCTACTCCTCTTT+TGG 0.139727 6.1:+9385569 MS.gene83875:CDS
AAGGAAGAAAATGAGAAATT+TGG 0.160898 6.1:+9385738 MS.gene83875:CDS
CTAGCTACATTATTCTTTCC+TGG 0.241589 6.1:-9386603 None:intergenic
AAGGGAAAAGTTGCAGATTA+AGG 0.276686 6.1:+9386349 MS.gene83875:intron
GTGTCATTTATTGACTTTCT+TGG 0.290615 6.1:+9387380 MS.gene83875:CDS
TCTCATTGCACTGCAAATTC+TGG 0.302223 6.1:-9387201 None:intergenic
TTGCATGCTCATACACTTCA+TGG 0.308993 6.1:+9386438 MS.gene83875:CDS
TGATGGTTATGGTTTCTCTT+TGG 0.310144 6.1:+9385509 MS.gene83875:CDS
AAAGCTGCTCTATTGATTCT+AGG 0.313747 6.1:-9386390 None:intergenic
AACACCAAGCTTTCCATTAG+AGG 0.318928 6.1:+9385762 MS.gene83875:CDS
CACATTTGCAAATTCTTTCC+TGG 0.321921 6.1:+9386474 MS.gene83875:CDS
TAGCTTTCTCTTTCTTGAAA+TGG 0.335783 6.1:-9386568 None:intergenic
CATACTCATTTGTGAATCAT+AGG 0.343634 6.1:-9386715 None:intergenic
TGGTCTCCAATGACCTCTAA+TGG 0.346646 6.1:-9385775 None:intergenic
AGTGCATTGTCTGTCCTTCC+AGG 0.351387 6.1:-9386492 None:intergenic
ATGAATTTGGTCCTCACAAT+TGG 0.357978 6.1:+9385829 MS.gene83875:CDS
AGGAAGAAAATGAGAAATTT+GGG 0.359459 6.1:+9385739 MS.gene83875:CDS
GGAAAGTTCAAAATACCCTT+TGG 0.375377 6.1:+9385615 MS.gene83875:CDS
GAAAGTTCAAAATACCCTTT+GGG 0.383315 6.1:+9385616 MS.gene83875:CDS
AGCTTTCCATTAGAGGTCAT+TGG 0.384561 6.1:+9385769 MS.gene83875:CDS
TGAGTTTGAATATGAATGAT+TGG 0.387864 6.1:-9387270 None:intergenic
ATAGAAAGAAAGGTAGAAGT+AGG 0.391467 6.1:+9387164 MS.gene83875:CDS
CATATTGGTAACAATGAGTC+TGG 0.398380 6.1:+9385594 MS.gene83875:CDS
CCAATCTCAACCTCACTACT+AGG 0.403128 6.1:+9386673 MS.gene83875:CDS
AAATGTGAGAGATAAGATTA+AGG 0.412885 6.1:+9387358 MS.gene83875:CDS
TAGCTACATTATTCTTTCCT+GGG 0.420815 6.1:-9386602 None:intergenic
AACTTGAACAATGATGGTTA+TGG 0.426752 6.1:+9385498 MS.gene83875:CDS
AGGCTTACTTATAGAAAGAA+AGG 0.428586 6.1:+9387154 MS.gene83875:intron
AAGGTAGAAGTAGGGGACTA+TGG 0.428911 6.1:+9387173 MS.gene83875:CDS
GATGAAGAAGGAAGTGGAGA+TGG 0.450833 6.1:-9385552 None:intergenic
GTTGAGTTAGATTCATCAAA+CGG 0.452201 6.1:-9386645 None:intergenic
TCACTAAACTTGAACAATGA+TGG 0.458857 6.1:+9385492 MS.gene83875:CDS
GTAGAAGATGAAGAAGGAAG+TGG 0.470505 6.1:-9385558 None:intergenic
AGAAGGAAGTGGAGATGGAA+GGG 0.471954 6.1:-9385547 None:intergenic
CCTAGTAGTGAGGTTGAGAT+TGG 0.475467 6.1:-9386673 None:intergenic
TAGAAAGAAAGGTAGAAGTA+GGG 0.480588 6.1:+9387165 MS.gene83875:CDS
TGACCATGCTCTCATTAGGA+TGG 0.490702 6.1:-9385659 None:intergenic
ATACACTTCATGGTAACAAA+TGG 0.493137 6.1:+9386448 MS.gene83875:CDS
GTTCAAGTTTAGTGAACTCA+TGG 0.494602 6.1:-9385484 None:intergenic
TCTTGGAGTAGGTGATACAT+AGG 0.495278 6.1:+9387397 MS.gene83875:CDS
GAACAAATACATGGAAGATC+GGG 0.507355 6.1:+9385864 MS.gene83875:CDS
TTTATTGACTTTCTTGGAGT+AGG 0.507502 6.1:+9387386 MS.gene83875:CDS
AAGCTAACATTTCAAATCCC+AGG 0.510479 6.1:+9386585 MS.gene83875:CDS
AAGAAGGAAGTGGAGATGGA+AGG 0.512851 6.1:-9385548 None:intergenic
TGAACAAATACATGGAAGAT+CGG 0.519885 6.1:+9385863 MS.gene83875:CDS
TTGAATATGAATGATTGGAT+TGG 0.524412 6.1:-9387265 None:intergenic
ATGACCTCTAATGGAAAGCT+TGG 0.534815 6.1:-9385766 None:intergenic
TCATTTGTGAATCATAGGCT+TGG 0.536300 6.1:-9386710 None:intergenic
AGAAAGAAAGGTAGAAGTAG+GGG 0.536632 6.1:+9387166 MS.gene83875:CDS
CTTGGAGTAGGTGATACATA+GGG 0.552083 6.1:+9387398 MS.gene83875:CDS
TTAAGCTTAGCATCTTCAGA+TGG 0.553691 6.1:-9385795 None:intergenic
TTCATCAAACGGATTTGTGA+TGG 0.555045 6.1:-9386634 None:intergenic
AGAGGAGTAGAAGATGAAGA+AGG 0.558498 6.1:-9385564 None:intergenic
AGGTTGTTCTCAAGGTCACA+TGG 0.563554 6.1:+9387223 MS.gene83875:CDS
TCATTAGGATGGATCACTGA+AGG 0.567180 6.1:-9385648 None:intergenic
TGATCATGGCTAGGAAGCAA+AGG 0.567964 6.1:+9386532 MS.gene83875:CDS
AACATTGCTGAACAAATACA+TGG 0.572771 6.1:+9385855 MS.gene83875:CDS
GCAATGAGAGGTTGTTCTCA+AGG 0.574721 6.1:+9387215 MS.gene83875:CDS
TTTGCAAATTCTTTCCTGGA+AGG 0.574934 6.1:+9386478 MS.gene83875:CDS
CTTGTCAATGAAAGTTGACA+AGG 0.581911 6.1:+9385719 MS.gene83875:CDS
TTACCAATATGACCCAAAAG+AGG 0.582661 6.1:-9385582 None:intergenic
GATCATGGCTAGGAAGCAAA+GGG 0.587417 6.1:+9386533 MS.gene83875:CDS
GCAATGTTGTTCCAATTGTG+AGG 0.589775 6.1:-9385840 None:intergenic
CATTAGGATGGATCACTGAA+GGG 0.599580 6.1:-9385647 None:intergenic
GAAGGGTTAGAAATCCCAAA+GGG 0.605125 6.1:-9385630 None:intergenic
GATCCATCCTAATGAGAGCA+TGG 0.615775 6.1:+9385656 MS.gene83875:CDS
TAGGCTTGGTAATTAAGCAA+AGG 0.630274 6.1:-9386696 None:intergenic
CATGGGAAAGCTTAAGAGTG+TGG 0.638298 6.1:+9387241 MS.gene83875:CDS
GGAAAAGTTGCAGATTAAGG+TGG 0.645857 6.1:+9386352 MS.gene83875:CDS
TAAGCAAAGGCCTAGTAGTG+AGG 0.652290 6.1:-9386683 None:intergenic
AGAATTTGCAGTGCAATGAG+AGG 0.669530 6.1:+9387203 MS.gene83875:CDS
TGAAGGGTTAGAAATCCCAA+AGG 0.675804 6.1:-9385631 None:intergenic
GGTTGTTCTCAAGGTCACAT+GGG 0.692971 6.1:+9387224 MS.gene83875:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGTCAAATAAATTAATAT+AGG - chr6.1:9387090-9387109 None:intergenic 10.0%
!!! AAAAATTGAATATTTTCAAA+AGG + chr6.1:9386034-9386053 MS.gene83875:intron 10.0%
!!! TTTTTGTGTTTTATTTTTTT+AGG + chr6.1:9387134-9387153 MS.gene83875:intron 10.0%
!!! AAAAATAATAAAGGGAATTT+TGG + chr6.1:9385681-9385700 MS.gene83875:CDS 15.0%
!!! AAAATAATAAAGGGAATTTT+GGG + chr6.1:9385682-9385701 MS.gene83875:CDS 15.0%
!!! AAAATTTTGAAGCAATTTAA+AGG - chr6.1:9387031-9387050 None:intergenic 15.0%
!!! TCATTTGTAATATTTTTTGA+AGG + chr6.1:9386277-9386296 MS.gene83875:intron 15.0%
!! CAAATATAGTAGTATTACAT+TGG + chr6.1:9386823-9386842 MS.gene83875:intron 20.0%
!! CAATGTAATACTACTATATT+TGG - chr6.1:9386825-9386844 None:intergenic 20.0%
!! TTAATTACCATTATCACAAA+AGG - chr6.1:9386330-9386349 None:intergenic 20.0%
!!! AAAAAACTTGTTGATGAATT+TGG + chr6.1:9385816-9385835 MS.gene83875:CDS 20.0%
!!! AAATAATAAAGGGAATTTTG+GGG + chr6.1:9385683-9385702 MS.gene83875:CDS 20.0%
!!! AATTTGTTATGTTCTAGTTT+AGG - chr6.1:9385896-9385915 None:intergenic 20.0%
!!! ATGAACAATGAATCAATTTT+GGG + chr6.1:9387326-9387345 MS.gene83875:CDS 20.0%
!!! TTGTGATAATGGTAATTAAA+GGG + chr6.1:9386331-9386350 MS.gene83875:intron 20.0%
!!! TTTGTGATAATGGTAATTAA+AGG + chr6.1:9386330-9386349 MS.gene83875:intron 20.0%
! AAATGTGAGAGATAAGATTA+AGG + chr6.1:9387358-9387377 MS.gene83875:CDS 25.0%
! AAGGAAGAAAATGAGAAATT+TGG + chr6.1:9385738-9385757 MS.gene83875:CDS 25.0%
! AGCATGGTCAAAAATAATAA+AGG + chr6.1:9385672-9385691 MS.gene83875:CDS 25.0%
! AGGAAGAAAATGAGAAATTT+GGG + chr6.1:9385739-9385758 MS.gene83875:CDS 25.0%
! ATTATAATCGCTGTTAAATG+CGG - chr6.1:9387002-9387021 None:intergenic 25.0%
! GCATGGTCAAAAATAATAAA+GGG + chr6.1:9385673-9385692 MS.gene83875:CDS 25.0%
! TGAGTTTGAATATGAATGAT+TGG - chr6.1:9387273-9387292 None:intergenic 25.0%
! TTGAATATGAATGATTGGAT+TGG - chr6.1:9387268-9387287 None:intergenic 25.0%
!! CATGAACAATGAATCAATTT+TGG + chr6.1:9387325-9387344 MS.gene83875:CDS 25.0%
AACATTGCTGAACAAATACA+TGG + chr6.1:9385855-9385874 MS.gene83875:CDS 30.0%
AACTTGAACAATGATGGTTA+TGG + chr6.1:9385498-9385517 MS.gene83875:CDS 30.0%
AGGCTTACTTATAGAAAGAA+AGG + chr6.1:9387154-9387173 MS.gene83875:intron 30.0%
ATACACTTCATGGTAACAAA+TGG + chr6.1:9386448-9386467 MS.gene83875:CDS 30.0%
ATAGAAAGAAAGGTAGAAGT+AGG + chr6.1:9387164-9387183 MS.gene83875:CDS 30.0%
ATGACTTAAATATAGGTCTG+CGG + chr6.1:9386948-9386967 MS.gene83875:intron 30.0%
CATACTCATTTGTGAATCAT+AGG - chr6.1:9386718-9386737 None:intergenic 30.0%
CATTTGATAAGCTAAAGTGA+AGG - chr6.1:9386749-9386768 None:intergenic 30.0%
GAAAGTTCAAAATACCCTTT+GGG + chr6.1:9385616-9385635 MS.gene83875:CDS 30.0%
GGTTAGCATGACTTAAATAT+AGG + chr6.1:9386941-9386960 MS.gene83875:intron 30.0%
GTATTACATTGGAAATTGTG+CGG + chr6.1:9386834-9386853 MS.gene83875:intron 30.0%
GTTGAGTTAGATTCATCAAA+CGG - chr6.1:9386648-9386667 None:intergenic 30.0%
TAGAAAGAAAGGTAGAAGTA+GGG + chr6.1:9387165-9387184 MS.gene83875:CDS 30.0%
TAGCTACATTATTCTTTCCT+GGG - chr6.1:9386605-9386624 None:intergenic 30.0%
TAGCTTTCTCTTTCTTGAAA+TGG - chr6.1:9386571-9386590 None:intergenic 30.0%
TCACTAAACTTGAACAATGA+TGG + chr6.1:9385492-9385511 MS.gene83875:CDS 30.0%
TGAACAAATACATGGAAGAT+CGG + chr6.1:9385863-9385882 MS.gene83875:CDS 30.0%
! GAATCATTTTCATGTGATCA+TGG + chr6.1:9386518-9386537 MS.gene83875:CDS 30.0%
! TGAGTTTCCTTTTGTGATAA+TGG + chr6.1:9386320-9386339 MS.gene83875:intron 30.0%
! TTACTCTTTTTGCACTTTTG+TGG - chr6.1:9386866-9386885 None:intergenic 30.0%
!! GTGTCATTTATTGACTTTCT+TGG + chr6.1:9387380-9387399 MS.gene83875:CDS 30.0%
!! TTTATTGACTTTCTTGGAGT+AGG + chr6.1:9387386-9387405 MS.gene83875:CDS 30.0%
AAATGCTAACTAGTGTCACA+GGG + chr6.1:9386783-9386802 MS.gene83875:intron 35.0%
AAGCTAACATTTCAAATCCC+AGG + chr6.1:9386585-9386604 MS.gene83875:CDS 35.0%
AAGGGAAAAGTTGCAGATTA+AGG + chr6.1:9386349-9386368 MS.gene83875:intron 35.0%
AGAAAGAAAGGTAGAAGTAG+GGG + chr6.1:9387166-9387185 MS.gene83875:CDS 35.0%
ATGAATTTGGTCCTCACAAT+TGG + chr6.1:9385829-9385848 MS.gene83875:CDS 35.0%
CACATTTGCAAATTCTTTCC+TGG + chr6.1:9386474-9386493 MS.gene83875:CDS 35.0%
CTAGCTACATTATTCTTTCC+TGG - chr6.1:9386606-9386625 None:intergenic 35.0%
CTTGTCAATGAAAGTTGACA+AGG + chr6.1:9385719-9385738 MS.gene83875:CDS 35.0%
GAACAAATACATGGAAGATC+GGG + chr6.1:9385864-9385883 MS.gene83875:CDS 35.0%
GCAACTTCAATTGAATATCG+TGG - chr6.1:9386974-9386993 None:intergenic 35.0%
GGAAAGTTCAAAATACCCTT+TGG + chr6.1:9385615-9385634 MS.gene83875:CDS 35.0%
TCATTTGTGAATCATAGGCT+TGG - chr6.1:9386713-9386732 None:intergenic 35.0%
TGATGGTTATGGTTTCTCTT+TGG + chr6.1:9385509-9385528 MS.gene83875:CDS 35.0%
TTAAGCTTAGCATCTTCAGA+TGG - chr6.1:9385798-9385817 None:intergenic 35.0%
TTACCAATATGACCCAAAAG+AGG - chr6.1:9385585-9385604 None:intergenic 35.0%
TTTGCAAATTCTTTCCTGGA+AGG + chr6.1:9386478-9386497 MS.gene83875:CDS 35.0%
! ATTTTCATGTGATCATGGCT+AGG + chr6.1:9386523-9386542 MS.gene83875:CDS 35.0%
! CATATTGGTAACAATGAGTC+TGG + chr6.1:9385594-9385613 MS.gene83875:CDS 35.0%
! TAGGCTTGGTAATTAAGCAA+AGG - chr6.1:9386699-9386718 None:intergenic 35.0%
! TCATCTTCTACTCCTCTTTT+GGG + chr6.1:9385570-9385589 MS.gene83875:CDS 35.0%
! TTCATCAAACGGATTTGTGA+TGG - chr6.1:9386637-9386656 None:intergenic 35.0%
! TTCATCTTCTACTCCTCTTT+TGG + chr6.1:9385569-9385588 MS.gene83875:CDS 35.0%
! TTTTTGACCATGCTCTCATT+AGG - chr6.1:9385666-9385685 None:intergenic 35.0%
!! AAAGCTGCTCTATTGATTCT+AGG - chr6.1:9386393-9386412 None:intergenic 35.0%
AACACCAAGCTTTCCATTAG+AGG + chr6.1:9385762-9385781 MS.gene83875:CDS 40.0%
AGAATTTGCAGTGCAATGAG+AGG + chr6.1:9387203-9387222 MS.gene83875:CDS 40.0%
AGAGGAGTAGAAGATGAAGA+AGG - chr6.1:9385567-9385586 None:intergenic 40.0%
AGCTTTCCATTAGAGGTCAT+TGG + chr6.1:9385769-9385788 MS.gene83875:CDS 40.0%
ATGACCTCTAATGGAAAGCT+TGG - chr6.1:9385769-9385788 None:intergenic 40.0%
CATTAGGATGGATCACTGAA+GGG - chr6.1:9385650-9385669 None:intergenic 40.0%
GAAATGCTAACTAGTGTCAC+AGG + chr6.1:9386782-9386801 MS.gene83875:intron 40.0%
GAAGGGTTAGAAATCCCAAA+GGG - chr6.1:9385633-9385652 None:intergenic 40.0%
GCAATGTTGTTCCAATTGTG+AGG - chr6.1:9385843-9385862 None:intergenic 40.0%
GGAAAAGTTGCAGATTAAGG+TGG + chr6.1:9386352-9386371 MS.gene83875:CDS 40.0%
GTAGAAGATGAAGAAGGAAG+TGG - chr6.1:9385561-9385580 None:intergenic 40.0%
TCATTAGGATGGATCACTGA+AGG - chr6.1:9385651-9385670 None:intergenic 40.0%
TCGATTCTAACGCAATTGCT+TGG + chr6.1:9386137-9386156 MS.gene83875:intron 40.0%
TCTCATTGCACTGCAAATTC+TGG - chr6.1:9387204-9387223 None:intergenic 40.0%
TGAAGGGTTAGAAATCCCAA+AGG - chr6.1:9385634-9385653 None:intergenic 40.0%
TTGCATGCTCATACACTTCA+TGG + chr6.1:9386438-9386457 MS.gene83875:CDS 40.0%
! AGCTTTTAGTGAGGAAGAAG+AGG + chr6.1:9386407-9386426 MS.gene83875:CDS 40.0%
! CAATAGAGCAGCTTTTAGTG+AGG + chr6.1:9386398-9386417 MS.gene83875:CDS 40.0%
!! ACTCCTCTTTTGGGTCATAT+TGG + chr6.1:9385579-9385598 MS.gene83875:CDS 40.0%
AAGAAGGAAGTGGAGATGGA+AGG - chr6.1:9385551-9385570 None:intergenic 45.0%
AAGGTAGAAGTAGGGGACTA+TGG + chr6.1:9387173-9387192 MS.gene83875:CDS 45.0%
AGAAGGAAGTGGAGATGGAA+GGG - chr6.1:9385550-9385569 None:intergenic 45.0%
AGGTTGTTCTCAAGGTCACA+TGG + chr6.1:9387223-9387242 MS.gene83875:CDS 45.0%
CATGGGAAAGCTTAAGAGTG+TGG + chr6.1:9387241-9387260 MS.gene83875:CDS 45.0%
CCAATCTCAACCTCACTACT+AGG + chr6.1:9386673-9386692 MS.gene83875:CDS 45.0%
CCTAGTAGTGAGGTTGAGAT+TGG - chr6.1:9386676-9386695 None:intergenic 45.0%
GATCATGGCTAGGAAGCAAA+GGG + chr6.1:9386533-9386552 MS.gene83875:CDS 45.0%
GATCCATCCTAATGAGAGCA+TGG + chr6.1:9385656-9385675 MS.gene83875:CDS 45.0%
GATGAAGAAGGAAGTGGAGA+TGG - chr6.1:9385555-9385574 None:intergenic 45.0%
GCAATGAGAGGTTGTTCTCA+AGG + chr6.1:9387215-9387234 MS.gene83875:CDS 45.0%
GGTTGTTCTCAAGGTCACAT+GGG + chr6.1:9387224-9387243 MS.gene83875:CDS 45.0%
TAAGCAAAGGCCTAGTAGTG+AGG - chr6.1:9386686-9386705 None:intergenic 45.0%
TGACCATGCTCTCATTAGGA+TGG - chr6.1:9385662-9385681 None:intergenic 45.0%
TGATCATGGCTAGGAAGCAA+AGG + chr6.1:9386532-9386551 MS.gene83875:CDS 45.0%
TGGTCTCCAATGACCTCTAA+TGG - chr6.1:9385778-9385797 None:intergenic 45.0%
ACTTCTTCAACCAGTGCTCC+GGG + chr6.1:9386912-9386931 MS.gene83875:intron 50.0%
AGTGCATTGTCTGTCCTTCC+AGG - chr6.1:9386495-9386514 None:intergenic 50.0%
GACTTCTTCAACCAGTGCTC+CGG + chr6.1:9386911-9386930 MS.gene83875:intron 50.0%
CTTCTTCAACCAGTGCTCCG+GGG + chr6.1:9386913-9386932 MS.gene83875:intron 55.0%
GTCATGCTAACCAGTGTCCC+CGG - chr6.1:9386933-9386952 None:intergenic 55.0%
AACCAGTGCTCCGGGGACAC+TGG + chr6.1:9386920-9386939 MS.gene83875:intron 65.0%
AACCAGTGTCCCCGGAGCAC+TGG - chr6.1:9386925-9386944 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 9385486 9387418 9385486 ID=MS.gene83875
chr6.1 mRNA 9385486 9387418 9385486 ID=MS.gene83875.t1;Parent=MS.gene83875
chr6.1 exon 9385486 9385885 9385486 ID=MS.gene83875.t1.exon1;Parent=MS.gene83875.t1
chr6.1 CDS 9385486 9385885 9385486 ID=cds.MS.gene83875.t1;Parent=MS.gene83875.t1
chr6.1 exon 9386352 9386732 9386352 ID=MS.gene83875.t1.exon2;Parent=MS.gene83875.t1
chr6.1 CDS 9386352 9386732 9386352 ID=cds.MS.gene83875.t1;Parent=MS.gene83875.t1
chr6.1 exon 9387156 9387418 9387156 ID=MS.gene83875.t1.exon3;Parent=MS.gene83875.t1
chr6.1 CDS 9387156 9387418 9387156 ID=cds.MS.gene83875.t1;Parent=MS.gene83875.t1
Gene Sequence

>MS.gene83875

ATGAGTTCACTAAACTTGAACAATGATGGTTATGGTTTCTCTTTGGACTTGAATATTTCTTCCCTTCCATCTCCACTTCCTTCTTCATCTTCTACTCCTCTTTTGGGTCATATTGGTAACAATGAGTCTGGAAAGTTCAAAATACCCTTTGGGATTTCTAACCCTTCAGTGATCCATCCTAATGAGAGCATGGTCAAAAATAATAAAGGGAATTTTGGGGATGAGAGAAAGAACTTGTCAATGAAAGTTGACAAGGAAGAAAATGAGAAATTTGGGAACACCAAGCTTTCCATTAGAGGTCATTGGAGACCATCTGAAGATGCTAAGCTTAAAAAACTTGTTGATGAATTTGGTCCTCACAATTGGAACAACATTGCTGAACAAATACATGGAAGATCGGGTATAATCCTAAACTAGAACATAACAAATTTTATTTATTGAAATTTCAAAAAGATTACTAATTTTTTTTTTATATCAAAGTTGTCTTAATAATGTAAATAGTTAACTTTCATTTATTTATTTTTTTGACAAGAAGTTTTATTTAAAAAAAAAATTGAATATTTTCAAAAGGTGCTTTTAATATATTTATTAAAATTGCATTAGTATTGTTTTTTGAATGAAATTCTCTTTAATTTGAATTATTTTTTTATATCGATTCTAACGCAATTGCTTGGTGCACAGTGATGATTTTGTTTTTTTTTTTTATGACAGTGTTATAATCATTTTTTTTATTTATTTTTTAAACATCTTGATGTTAGATTTAAATTGTGTTTTCAAGATTTATATTTAATTCATTTGTAATATTTTTTGAAGGAGTTTATGTAATGTAACATTTGAGTTTCCTTTTGTGATAATGGTAATTAAAGGGAAAAGTTGCAGATTAAGGTGGTGTAATCAGCTAGATCCTAGAATCAATAGAGCAGCTTTTAGTGAGGAAGAAGAGGAGAAGCTTTTGCATGCTCATACACTTCATGGTAACAAATGGTCACACATTTGCAAATTCTTTCCTGGAAGGACAGACAATGCACTGAAGAATCATTTTCATGTGATCATGGCTAGGAAGCAAAGGGAACTATTATCATCCATTTCAAGAAAGAGAAAGCTAACATTTCAAATCCCAGGAAAGAATAATGTAGCTAGCAAATCAGCCATCACAAATCCGTTTGATGAATCTAACTCAACTTGCACCAATCTCAACCTCACTACTAGGCCTTTGCTTAATTACCAAGCCTATGATTCACAAATGAGTATGCGTTGAATCCTTCACTTTAGCTTATCAAATGATTTTAAATATGAGAAATGCTAACTAGTGTCACAGGGATACTGATTAAGAAAGCCAAATATAGTAGTATTACATTGGAAATTGTGCGGTCAATGCCACAAAAGTGCAAAAAGAGTAATTTTCAACTTAAAACTTAATCTTTTGACTTCTTCAACCAGTGCTCCGGGGACACTGGTTAGCATGACTTAAATATAGGTCTGCGGCCACGATATTCAATTGAAGTTGCATCTACCGCATTTAACAGCGATTATAATTTAAAACCTTTAAATTGCTTCAAAATTTTGTTATTTTCTCTCATGTCTTAATAAACACTAAATATCCTATATTAATTTATTTGACATATGCTATATATGATCATGTTGTTGATTTTTGTGTTTTATTTTTTTAGGCTTACTTATAGAAAGAAAGGTAGAAGTAGGGGACTATGGTTTTGCCAGAATTTGCAGTGCAATGAGAGGTTGTTCTCAAGGTCACATGGGAAAGCTTAAGAGTGTGGACCAATCCAATCATTCATATTCAAACTCAGAAGTTTCAGTATCTGAGTCAGTTGCAACAAACATGAACAATGAATCAATTTTGGGAGAAAGTGAAAATGTGAGAGATAAGATTAAGGTGTCATTTATTGACTTTCTTGGAGTAGGTGATACATAG
Protein sequence

>MS.gene83875.t1

MSSLNLNNDGYGFSLDLNISSLPSPLPSSSSTPLLGHIGNNESGKFKIPFGISNPSVIHPNESMVKNNKGNFGDERKNLSMKVDKEENEKFGNTKLSIRGHWRPSEDAKLKKLVDEFGPHNWNNIAEQIHGRSGKSCRLRWCNQLDPRINRAAFSEEEEEKLLHAHTLHGNKWSHICKFFPGRTDNALKNHFHVIMARKQRELLSSISRKRKLTFQIPGKNNVASKSAITNPFDESNSTCTNLNLTTRPLLNYQAYDSQMSLLIERKVEVGDYGFARICSAMRGCSQGHMGKLKSVDQSNHSYSNSEVSVSESVATNMNNESILGESENVRDKIKVSFIDFLGVGDT