AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene83879

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83879.t1 MTR_6g027360 86.232 276 37 1 1 275 33 308 6.86e-175 484
MS.gene83879.t1 MTR_6g027340 78.776 245 12 1 31 275 1 205 3.89e-135 380
MS.gene83879.t1 MTR_6g027370 62.300 313 77 8 3 275 36 347 4.69e-115 335
MS.gene83879.t1 MTR_7g086960 45.896 268 103 7 45 273 88 352 1.72e-55 182
MS.gene83879.t1 MTR_5g041570 52.482 141 64 2 27 167 117 254 2.86e-46 160
MS.gene83879.t1 MTR_4g082040 61.062 113 44 0 45 157 104 216 3.07e-46 160
MS.gene83879.t1 MTR_6g074860 36.017 236 138 3 45 273 3 232 1.28e-45 154
MS.gene83879.t1 MTR_3g089045 65.385 104 36 0 46 149 16 119 4.13e-45 154
MS.gene83879.t1 MTR_4g019370 53.465 101 47 0 46 146 38 138 1.66e-35 130
MS.gene83879.t1 MTR_5g082910 36.957 138 87 0 34 171 7 144 3.27e-31 117
MS.gene83879.t1 MTR_3g101290 46.535 101 54 0 46 146 37 137 3.37e-30 113
MS.gene83879.t1 MTR_3g463400 49.505 101 51 0 46 146 133 233 4.10e-29 115
MS.gene83879.t1 MTR_5g016510 38.400 125 77 0 46 170 5 129 9.51e-29 111
MS.gene83879.t1 MTR_4g094982 41.667 108 63 0 46 153 5 112 1.65e-27 107
MS.gene83879.t1 MTR_5g070020 48.515 101 52 0 46 146 122 222 2.36e-27 108
MS.gene83879.t1 MTR_5g049190 42.609 115 61 1 31 145 9 118 2.68e-27 106
MS.gene83879.t1 MTR_3g077650 47.525 101 53 0 46 146 181 281 7.99e-27 108
MS.gene83879.t1 MTR_6g015455 45.833 96 52 0 46 141 5 100 1.43e-26 109
MS.gene83879.t1 MTR_1g100667 47.222 108 54 2 42 146 9 116 2.34e-26 104
MS.gene83879.t1 MTR_4g105660 46.535 101 54 0 46 146 180 280 7.72e-26 105
MS.gene83879.t1 MTR_7g061330 49.474 95 48 0 46 140 113 207 1.79e-25 105
MS.gene83879.t1 MTR_7g461410 49.474 95 48 0 46 140 113 207 1.79e-25 105
MS.gene83879.t1 MTR_7g061330 49.474 95 48 0 46 140 77 171 2.26e-25 105
MS.gene83879.t1 MTR_4g100720 48.039 102 50 2 45 143 14 115 2.53e-25 99.4
MS.gene83879.t1 MTR_7g037260 44.660 103 56 1 46 148 145 246 3.46e-25 102
MS.gene83879.t1 MTR_3g110028 42.593 108 62 0 46 153 85 192 6.56e-25 104
MS.gene83879.t1 MTR_7g451170 43.564 101 57 0 46 146 191 291 6.65e-25 102
MS.gene83879.t1 MTR_1g110460 44.340 106 58 1 46 150 28 133 8.61e-25 101
MS.gene83879.t1 MTR_1g026870 42.593 108 62 0 46 153 85 192 9.01e-25 103
MS.gene83879.t1 MTR_1g026870 34.906 106 64 2 40 140 23 128 2.72e-15 76.3
MS.gene83879.t1 MTR_5g010020 45.918 98 52 1 43 139 11 108 1.58e-24 100
MS.gene83879.t1 MTR_6g055910 46.000 100 53 1 42 140 12 111 3.55e-24 99.0
MS.gene83879.t1 MTR_2g097910 41.964 112 62 2 46 155 22 132 3.61e-24 99.8
MS.gene83879.t1 MTR_8g098860 40.741 108 63 1 43 149 11 118 5.56e-24 99.0
MS.gene83879.t1 MTR_5g042030 43.103 116 64 2 46 159 9 124 7.67e-24 98.2
MS.gene83879.t1 MTR_2g089620 38.776 147 79 3 46 181 14 160 1.20e-23 98.2
MS.gene83879.t1 MTR_4g065017 40.517 116 68 1 36 150 9 124 1.25e-23 98.2
MS.gene83879.t1 MTR_4g088015 43.000 100 57 0 46 145 221 320 1.32e-23 99.8
MS.gene83879.t1 MTR_2g064160 45.455 99 51 2 43 139 10 107 1.38e-23 97.8
MS.gene83879.t1 MTR_7g035075 46.316 95 50 1 46 139 16 110 1.77e-23 95.1
MS.gene83879.t1 MTR_2g089450 46.939 98 49 2 46 141 14 110 1.93e-23 96.3
MS.gene83879.t1 MTR_3g052450 42.991 107 60 1 46 151 42 148 2.15e-23 99.4
MS.gene83879.t1 MTR_1g085040 42.453 106 58 2 46 149 14 118 3.26e-23 97.8
MS.gene83879.t1 MTR_2g089420 37.226 137 74 3 46 171 13 148 3.29e-23 98.6
MS.gene83879.t1 MTR_0008s0470 36.879 141 84 3 46 184 15 152 3.33e-23 96.3
MS.gene83879.t1 MTR_0008s0390 35.211 142 89 2 46 185 15 155 3.77e-23 95.9
MS.gene83879.t1 MTR_3g074520 50.000 96 45 2 46 139 14 108 3.94e-23 97.1
MS.gene83879.t1 MTR_5g010650 44.681 94 52 0 46 139 110 203 4.02e-23 98.6
MS.gene83879.t1 MTR_7g035350 33.987 153 85 2 46 182 225 377 4.61e-23 98.2
MS.gene83879.t1 MTR_1g086530 41.121 107 60 2 46 150 35 140 5.25e-23 95.5
MS.gene83879.t1 MTR_3g011610 42.056 107 61 1 46 151 39 145 5.30e-23 98.2
MS.gene83879.t1 MTR_3g052430 42.991 107 60 1 46 151 43 149 6.20e-23 98.2
MS.gene83879.t1 MTR_5g029840 45.361 97 52 1 46 141 14 110 6.30e-23 96.3
MS.gene83879.t1 MTR_7g450950 40.179 112 67 0 32 143 143 254 7.12e-23 96.3
MS.gene83879.t1 MTR_2g011660 45.045 111 59 2 40 148 9 119 9.91e-23 95.9
MS.gene83879.t1 MTR_1g100653 42.056 107 61 1 46 151 14 120 9.95e-23 95.1
MS.gene83879.t1 MTR_1g085640 41.905 105 60 1 46 149 14 118 1.21e-22 96.3
MS.gene83879.t1 MTR_2g099740 47.312 93 46 2 49 139 17 108 1.27e-22 96.3
MS.gene83879.t1 MTR_3g028740 38.710 124 74 2 26 148 5 127 1.58e-22 95.5
MS.gene83879.t1 MTR_8g017440 47.312 93 46 2 49 139 17 108 1.69e-22 95.5
MS.gene83879.t1 MTR_1g017000 33.333 156 96 4 43 193 11 163 1.84e-22 93.6
MS.gene83879.t1 MTR_6g009430 41.584 101 58 1 42 141 10 110 1.84e-22 95.1
MS.gene83879.t1 MTR_0251s0050 41.071 112 62 3 46 154 15 125 1.99e-22 94.0
MS.gene83879.t1 MTR_6g006030 46.316 95 50 1 46 139 16 110 2.00e-22 92.4
MS.gene83879.t1 MTR_0063s0090 40.000 125 67 3 46 163 14 137 2.44e-22 92.8
MS.gene83879.t1 MTR_7g110830 40.952 105 61 1 46 149 14 118 2.65e-22 95.1
MS.gene83879.t1 MTR_7g115650 43.243 111 61 2 46 154 14 124 2.82e-22 92.0
MS.gene83879.t1 MTR_2g067420 44.330 97 53 1 46 141 16 112 3.05e-22 94.4
MS.gene83879.t1 MTR_8g017540 39.062 128 63 3 49 174 63 177 3.21e-22 95.1
MS.gene83879.t1 MTR_7g037130 42.857 98 56 0 46 143 145 242 3.51e-22 94.7
MS.gene83879.t1 MTR_1g112760 45.361 97 50 2 46 140 15 110 3.80e-22 92.4
MS.gene83879.t1 MTR_3g461490 44.330 97 53 1 46 141 14 110 4.25e-22 94.0
MS.gene83879.t1 MTR_0008s0280 44.330 97 51 2 46 140 14 109 5.80e-22 91.7
MS.gene83879.t1 MTR_5g079670 45.361 97 52 1 45 140 12 108 5.98e-22 91.3
MS.gene83879.t1 MTR_1g083630 39.669 121 69 3 31 150 1 118 6.65e-22 95.5
MS.gene83879.t1 MTR_1g062940 40.708 113 59 3 36 146 3 109 6.79e-22 91.3
MS.gene83879.t1 MTR_4g063100 41.509 106 57 3 46 147 9 113 7.22e-22 92.0
MS.gene83879.t1 MTR_8g042410 42.056 107 61 1 46 151 39 145 8.03e-22 95.1
MS.gene83879.t1 MTR_7g111290 46.809 94 47 2 46 137 14 106 8.82e-22 94.0
MS.gene83879.t1 MTR_4g091490 44.144 111 60 2 40 148 9 119 9.53e-22 93.6
MS.gene83879.t1 MTR_5g014990 42.241 116 61 4 46 159 14 125 1.02e-21 92.8
MS.gene83879.t1 MTR_5g007370 46.939 98 49 2 46 141 14 110 1.28e-21 92.4
MS.gene83879.t1 MTR_8g020490 44.792 96 52 1 45 139 9 104 1.28e-21 91.3
MS.gene83879.t1 MTR_1g086510 37.288 118 73 1 42 158 19 136 1.29e-21 91.7
MS.gene83879.t1 MTR_4g125520 40.566 106 62 1 46 150 14 119 1.51e-21 92.0
MS.gene83879.t1 MTR_5g062790 37.190 121 74 2 46 164 11 131 1.53e-21 92.0
MS.gene83879.t1 MTR_3g077110 45.455 99 51 2 43 139 11 108 1.60e-21 92.8
MS.gene83879.t1 MTR_4g105130 44.211 95 52 1 46 139 14 108 1.77e-21 92.8
MS.gene83879.t1 MTR_8g027345 37.168 113 68 2 46 155 14 126 2.48e-21 91.7
MS.gene83879.t1 MTR_6g012180 36.154 130 79 2 46 174 14 140 5.00e-21 90.9
MS.gene83879.t1 MTR_6g012690 41.379 116 66 2 46 159 14 129 5.27e-21 91.3
MS.gene83879.t1 MTR_8g017500 45.161 93 48 2 49 139 17 108 7.28e-21 90.9
MS.gene83879.t1 MTR_1g057980 41.837 98 57 0 46 143 80 177 7.36e-21 90.1
MS.gene83879.t1 MTR_1g045610 43.750 96 51 2 46 139 23 117 7.43e-21 89.4
MS.gene83879.t1 MTR_5g088610 37.190 121 74 2 46 164 11 131 8.49e-21 90.9
MS.gene83879.t1 MTR_4g097570 42.857 98 53 2 46 140 14 111 8.98e-21 89.7
MS.gene83879.t1 MTR_1g076150 46.316 95 48 2 49 141 17 110 9.39e-21 89.0
MS.gene83879.t1 MTR_0001s0360 44.330 97 53 1 46 141 9 105 1.07e-20 89.0
MS.gene83879.t1 MTR_8g017350 41.964 112 60 2 43 152 11 119 1.21e-20 91.7
MS.gene83879.t1 MTR_1g073170 40.816 98 55 2 46 141 22 118 1.28e-20 88.6
MS.gene83879.t1 MTR_3g103570 42.857 98 54 2 46 141 14 111 1.33e-20 90.1
MS.gene83879.t1 MTR_0247s0040 45.263 95 51 1 46 139 9 103 1.49e-20 86.7
MS.gene83879.t1 MTR_3g065440 41.739 115 63 3 46 157 14 127 1.51e-20 89.4
MS.gene83879.t1 MTR_2g096380 42.708 96 52 2 46 139 8 102 1.70e-20 87.8
MS.gene83879.t1 MTR_7g010210 42.268 97 55 1 46 141 14 110 2.11e-20 88.6
MS.gene83879.t1 MTR_7g010210 42.268 97 55 1 46 141 14 110 2.11e-20 89.4
MS.gene83879.t1 MTR_4g478180 45.918 98 50 2 46 141 15 111 2.16e-20 89.7
MS.gene83879.t1 MTR_4g073420 42.268 97 55 1 46 141 14 110 2.23e-20 88.6
MS.gene83879.t1 MTR_7g117730 41.489 94 54 1 49 141 17 110 2.90e-20 87.8
MS.gene83879.t1 MTR_7g076740 41.667 108 59 3 46 150 14 120 2.92e-20 88.6
MS.gene83879.t1 MTR_1g017140 41.667 108 58 3 46 151 14 118 3.19e-20 89.0
MS.gene83879.t1 MTR_2g095520 43.878 98 53 2 46 141 14 111 3.44e-20 88.6
MS.gene83879.t1 MTR_8g017390 43.434 99 54 1 43 139 11 109 3.46e-20 90.1
MS.gene83879.t1 MTR_8g017340 41.071 112 61 2 43 152 11 119 3.48e-20 90.1
MS.gene83879.t1 MTR_5g079290 43.299 97 54 1 46 141 19 115 3.71e-20 87.8
MS.gene83879.t1 MTR_5g088080 37.168 113 69 2 42 152 10 122 4.08e-20 87.4
MS.gene83879.t1 MTR_5g088150 37.168 113 69 2 42 152 10 122 4.08e-20 87.4
MS.gene83879.t1 MTR_5g488210 37.168 113 69 2 42 152 10 122 4.08e-20 87.4
MS.gene83879.t1 MTR_5g088640 37.168 113 69 2 42 152 10 122 4.17e-20 87.8
MS.gene83879.t1 MTR_7g011170 39.024 123 71 3 46 165 14 135 4.25e-20 88.2
MS.gene83879.t1 MTR_8g031360 43.269 104 55 3 46 146 15 117 4.75e-20 87.8
MS.gene83879.t1 MTR_5g078140 45.918 98 50 2 46 141 14 110 4.84e-20 88.2
MS.gene83879.t1 MTR_8g095390 40.625 96 56 1 46 140 14 109 5.13e-20 88.2
MS.gene83879.t1 MTR_1g043080 42.157 102 58 1 46 146 14 115 6.12e-20 87.0
MS.gene83879.t1 MTR_4g121460 34.058 138 77 2 46 182 14 138 6.77e-20 88.2
MS.gene83879.t1 MTR_5g488170 37.168 113 69 2 42 152 10 122 7.15e-20 86.3
MS.gene83879.t1 MTR_1g043050 42.157 102 58 1 46 146 14 115 7.16e-20 86.7
MS.gene83879.t1 MTR_5g079220 42.708 96 54 1 46 140 23 118 7.23e-20 87.0
MS.gene83879.t1 MTR_4g097570 42.268 97 54 2 46 140 14 110 9.00e-20 87.0
MS.gene83879.t1 MTR_4g082230 40.517 116 67 2 46 159 14 129 1.02e-19 88.2
MS.gene83879.t1 MTR_8g060940 44.898 98 51 2 46 141 9 105 1.15e-19 85.9
MS.gene83879.t1 MTR_4g057635 43.000 100 55 2 42 139 10 109 1.31e-19 87.0
MS.gene83879.t1 MTR_5g078910 42.268 97 55 1 46 141 9 105 1.54e-19 86.7
MS.gene83879.t1 MTR_2g034790 38.182 110 67 1 46 154 14 123 1.58e-19 87.0
MS.gene83879.t1 MTR_4g485530 43.299 97 52 2 45 139 13 108 1.68e-19 84.3
MS.gene83879.t1 MTR_7g087130 35.821 134 84 2 46 178 14 146 1.79e-19 87.0
MS.gene83879.t1 MTR_5g078860 43.299 97 54 1 46 141 9 105 1.84e-19 86.3
MS.gene83879.t1 MTR_3g039990 42.268 97 55 1 46 141 15 111 1.84e-19 86.7
MS.gene83879.t1 MTR_5g078800 42.268 97 55 1 46 141 9 105 2.18e-19 85.5
MS.gene83879.t1 MTR_8g006470 37.956 137 71 4 46 168 12 148 2.40e-19 85.9
MS.gene83879.t1 MTR_7g096930 41.322 121 66 2 46 161 14 134 2.45e-19 85.5
MS.gene83879.t1 MTR_7g102110 42.857 98 54 2 46 141 14 111 2.64e-19 85.5
MS.gene83879.t1 MTR_2g088170 44.444 108 57 2 46 151 31 137 2.98e-19 87.4
MS.gene83879.t1 MTR_3g097450 40.206 97 57 1 46 141 14 110 3.57e-19 85.5
MS.gene83879.t1 MTR_4g128670 41.837 98 55 2 46 141 14 111 3.98e-19 86.3
MS.gene83879.t1 MTR_0140s0030 41.176 102 59 1 46 146 15 116 5.05e-19 85.5
MS.gene83879.t1 MTR_0489s0020 41.176 102 59 1 46 146 15 116 5.05e-19 85.5
MS.gene83879.t1 MTR_2g033170 38.596 114 69 1 46 158 26 139 5.18e-19 85.5
MS.gene83879.t1 MTR_5g078950 40.777 103 59 2 41 141 3 105 6.18e-19 84.3
MS.gene83879.t1 MTR_3g083540 40.206 97 57 1 46 141 43 139 6.96e-19 84.7
MS.gene83879.t1 MTR_4g082290 40.517 116 67 2 46 159 14 129 7.90e-19 85.9
MS.gene83879.t1 MTR_6g055910 54.839 62 28 0 79 140 21 82 9.23e-19 83.6
MS.gene83879.t1 MTR_4g102380 42.857 98 53 2 46 141 14 110 1.03e-18 84.0
MS.gene83879.t1 MTR_7g061550 35.965 114 70 1 46 156 7 120 1.20e-18 84.7
MS.gene83879.t1 MTR_0193s0090 42.268 97 55 1 46 141 9 105 1.34e-18 82.0
MS.gene83879.t1 MTR_0197s0010 44.211 95 50 2 49 141 6 99 1.41e-18 82.4
MS.gene83879.t1 MTR_7g017260 38.983 118 66 3 32 143 12 129 1.65e-18 83.2
MS.gene83879.t1 MTR_6g090405 42.308 104 54 3 42 141 10 111 2.02e-18 82.8
MS.gene83879.t1 MTR_4g029540 40.000 105 61 2 46 148 12 116 3.76e-18 82.8
MS.gene83879.t1 MTR_5g079120 37.391 115 69 2 46 159 63 175 4.38e-18 82.8
MS.gene83879.t1 MTR_4g123040 38.596 114 69 1 46 158 26 139 7.34e-18 82.0
MS.gene83879.t1 MTR_5g078930 34.058 138 81 2 46 173 11 148 1.01e-17 80.1
MS.gene83879.t1 MTR_1g021230 38.462 104 63 1 46 148 59 162 1.05e-17 82.8
MS.gene83879.t1 MTR_4g063100 46.479 71 36 1 79 147 14 84 4.88e-17 78.2
MS.gene83879.t1 MTR_3g045430 33.010 103 68 1 40 141 9 111 1.21e-16 78.6
MS.gene83879.t1 MTR_8g468380 31.304 115 78 1 49 163 25 138 1.60e-16 79.3
MS.gene83879.t1 MTR_5g038910 32.456 114 75 1 49 162 29 140 2.01e-16 79.0
MS.gene83879.t1 MTR_5g038910 32.456 114 75 1 49 162 29 140 2.52e-16 78.6
MS.gene83879.t1 MTR_2g096380 49.180 61 31 0 79 139 23 83 5.23e-16 75.5
MS.gene83879.t1 MTR_7g111290 52.542 59 28 0 79 137 6 64 5.31e-16 77.0
MS.gene83879.t1 MTR_7g109320 38.235 102 62 1 46 146 14 115 3.02e-14 72.0
MS.gene83879.t1 MTR_5g007300 45.333 75 40 1 46 119 66 140 7.86e-14 67.4
MS.gene83879.t1 MTR_1g008970 46.154 65 35 0 72 136 117 181 1.06e-13 69.7
MS.gene83879.t1 MTR_1g085880 39.623 106 62 2 49 152 17 122 2.63e-13 67.4
MS.gene83879.t1 MTR_6g080360 34.409 93 60 1 47 139 480 571 4.32e-13 69.7
MS.gene83879.t1 MTR_6g080360 34.409 93 60 1 47 139 260 351 6.54e-13 68.9
MS.gene83879.t1 MTR_1g085770 39.623 106 62 2 49 152 17 122 7.78e-13 67.8
MS.gene83879.t1 MTR_4g128190 37.931 87 52 2 79 164 34 119 8.52e-13 66.6
MS.gene83879.t1 MTR_7g115550 36.957 92 57 1 49 140 10 100 1.63e-11 64.7
MS.gene83879.t1 MTR_7g115550 36.957 92 57 1 49 140 10 100 2.13e-11 64.3
MS.gene83879.t1 MTR_7g035300 46.875 64 33 1 80 143 99 161 3.03e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene83879.t1 AT4G33450 38.115 244 138 6 38 273 9 247 1.24e-48 162
MS.gene83879.t1 AT1G69560 38.400 250 138 3 29 273 90 328 2.60e-48 163
MS.gene83879.t1 AT1G69560 38.400 250 138 3 29 273 106 344 3.45e-48 163
MS.gene83879.t1 AT1G26780 56.349 126 54 1 46 171 98 222 7.24e-45 153
MS.gene83879.t1 AT1G17950 37.109 256 120 7 45 275 4 243 1.48e-44 151
MS.gene83879.t1 AT1G26780 56.349 126 54 1 46 171 98 222 2.24e-44 154
MS.gene83879.t1 AT5G17800 36.861 274 119 9 28 273 74 321 2.79e-42 147
MS.gene83879.t1 AT1G73410 36.434 258 116 6 45 275 5 241 1.16e-41 144
MS.gene83879.t1 AT3G29020 56.637 113 49 0 45 157 64 176 2.78e-41 142
MS.gene83879.t1 AT3G29020 56.637 113 49 0 45 157 66 178 2.39e-40 142
MS.gene83879.t1 AT1G73410 60.952 105 41 0 45 149 5 109 3.05e-40 139
MS.gene83879.t1 AT3G55730 50.476 105 52 0 46 150 56 160 1.72e-31 120
MS.gene83879.t1 AT5G39700 50.000 110 55 0 47 156 57 166 5.17e-30 112
MS.gene83879.t1 AT2G39880 43.182 132 60 2 34 165 42 158 4.10e-29 114
MS.gene83879.t1 AT5G67300 45.545 101 55 0 46 146 6 106 9.60e-29 111
MS.gene83879.t1 AT4G37260 43.925 107 60 0 40 146 7 113 5.20e-28 110
MS.gene83879.t1 AT3G09230 47.525 101 53 0 46 146 55 155 6.60e-28 110
MS.gene83879.t1 AT2G25230 45.098 102 56 0 46 147 26 127 1.94e-27 106
MS.gene83879.t1 AT5G11050 48.515 101 52 0 46 146 105 205 5.79e-27 108
MS.gene83879.t1 AT5G58850 48.515 101 52 0 46 146 105 205 1.41e-26 107
MS.gene83879.t1 AT3G50060 42.574 101 58 0 46 146 6 106 1.73e-26 105
MS.gene83879.t1 AT5G40360 44.000 100 56 0 46 145 158 257 1.87e-26 106
MS.gene83879.t1 AT2G23290 43.564 101 57 0 46 146 13 113 6.25e-26 104
MS.gene83879.t1 AT3G27785 45.098 102 56 0 46 147 189 290 1.52e-25 105
MS.gene83879.t1 AT4G18770 46.535 101 54 0 46 146 217 317 1.89e-25 104
MS.gene83879.t1 AT5G11510 42.593 108 62 0 46 153 81 188 2.81e-25 105
MS.gene83879.t1 AT5G11510 42.593 108 62 0 46 153 81 188 2.81e-25 105
MS.gene83879.t1 AT5G11510 42.593 108 62 0 46 153 81 188 2.81e-25 105
MS.gene83879.t1 AT3G53200 44.554 101 53 2 49 147 14 113 4.15e-25 100
MS.gene83879.t1 AT5G11510 42.593 108 62 0 46 153 81 188 4.57e-25 104
MS.gene83879.t1 AT5G11510 42.593 108 62 0 46 153 81 188 4.60e-25 104
MS.gene83879.t1 AT1G63910 46.939 98 51 1 43 139 11 108 6.52e-25 102
MS.gene83879.t1 AT3G11440 42.991 107 60 1 46 151 43 149 1.19e-24 102
MS.gene83879.t1 AT3G11440 42.991 107 60 1 46 151 43 149 1.20e-24 103
MS.gene83879.t1 AT3G11440 42.991 107 60 1 46 151 43 149 1.20e-24 103
MS.gene83879.t1 AT3G11440 42.991 107 60 1 46 151 43 149 1.20e-24 103
MS.gene83879.t1 AT2G47190 41.818 110 63 1 46 154 22 131 1.20e-24 100
MS.gene83879.t1 AT3G48920 46.465 99 52 1 43 140 17 115 2.16e-24 99.0
MS.gene83879.t1 AT2G26950 43.119 109 50 3 45 148 17 118 3.03e-24 100
MS.gene83879.t1 AT3G09370 47.368 95 50 0 46 140 130 224 3.47e-24 101
MS.gene83879.t1 AT3G09370 47.368 95 50 0 46 140 135 229 3.58e-24 101
MS.gene83879.t1 AT3G09370 47.368 95 50 0 46 140 143 237 3.85e-24 101
MS.gene83879.t1 AT5G02320 46.316 95 51 0 46 140 127 221 4.05e-24 101
MS.gene83879.t1 AT5G02320 46.316 95 51 0 46 140 127 221 4.05e-24 101
MS.gene83879.t1 AT5G02320 46.316 95 51 0 46 140 67 161 4.25e-24 101
MS.gene83879.t1 AT1G18570 39.041 146 69 4 46 182 15 149 4.69e-24 99.8
MS.gene83879.t1 AT3G12720 47.312 93 46 2 49 139 27 118 4.76e-24 99.0
MS.gene83879.t1 AT4G25560 46.875 96 50 1 46 140 12 107 5.16e-24 98.6
MS.gene83879.t1 AT4G28110 43.103 116 64 2 46 159 14 129 5.34e-24 98.6
MS.gene83879.t1 AT4G05100 47.059 102 53 1 46 146 15 116 7.57e-24 99.0
MS.gene83879.t1 AT5G54230 40.310 129 75 2 46 172 14 142 1.08e-23 98.2
MS.gene83879.t1 AT5G07700 46.078 102 54 1 46 146 14 115 1.34e-23 98.2
MS.gene83879.t1 AT5G07700 46.078 102 54 1 46 146 14 115 1.34e-23 98.2
MS.gene83879.t1 AT5G06100 43.269 104 58 1 46 148 34 137 1.41e-23 99.8
MS.gene83879.t1 AT5G14750 41.509 106 61 1 37 141 9 114 1.56e-23 95.5
MS.gene83879.t1 AT5G06100 42.991 107 60 1 46 151 34 140 1.60e-23 99.8
MS.gene83879.t1 AT5G06100 42.991 107 60 1 46 151 34 140 1.60e-23 99.8
MS.gene83879.t1 AT5G06100 42.991 107 60 1 46 151 34 140 1.60e-23 99.8
MS.gene83879.t1 AT5G06100 42.991 107 60 1 46 151 34 140 1.60e-23 99.8
MS.gene83879.t1 AT5G61420 42.105 114 64 2 46 157 14 127 1.94e-23 98.2
MS.gene83879.t1 AT1G79180 44.860 107 56 2 42 146 12 117 2.02e-23 97.1
MS.gene83879.t1 AT3G27810 39.231 130 76 2 46 172 22 151 2.10e-23 95.5
MS.gene83879.t1 AT3G23250 45.455 99 53 1 49 146 17 115 2.32e-23 96.7
MS.gene83879.t1 AT5G12870 38.532 109 66 1 43 150 17 125 2.61e-23 96.7
MS.gene83879.t1 AT5G60890 42.105 114 64 2 46 157 14 127 3.46e-23 96.7
MS.gene83879.t1 AT1G48000 46.739 92 48 1 49 139 37 128 4.03e-23 95.1
MS.gene83879.t1 AT5G40350 36.000 150 87 4 46 189 19 165 4.18e-23 94.4
MS.gene83879.t1 AT3G08500 40.351 114 67 1 36 148 22 135 5.16e-23 97.1
MS.gene83879.t1 AT5G65230 51.042 96 44 2 46 139 14 108 5.42e-23 96.3
MS.gene83879.t1 AT1G57560 35.915 142 73 3 46 170 14 154 5.44e-23 95.5
MS.gene83879.t1 AT5G40430 39.286 112 67 1 45 156 53 163 7.75e-23 94.7
MS.gene83879.t1 AT3G02940 48.421 95 48 1 46 139 14 108 7.81e-23 95.9
MS.gene83879.t1 AT3G30210 38.843 121 67 3 46 159 29 149 9.14e-23 95.1
MS.gene83879.t1 AT5G52600 44.681 94 51 1 49 141 17 110 9.61e-23 93.2
MS.gene83879.t1 AT5G40330 35.821 134 85 1 46 178 14 147 9.73e-23 93.6
MS.gene83879.t1 AT3G01530 46.316 95 50 1 46 139 27 121 9.90e-23 93.2
MS.gene83879.t1 AT3G02940 48.421 95 48 1 46 139 14 108 1.13e-22 95.5
MS.gene83879.t1 AT3G02940 48.421 95 48 1 46 139 14 108 1.13e-22 95.5
MS.gene83879.t1 AT4G17785 46.939 98 49 2 46 141 15 111 1.27e-22 95.9
MS.gene83879.t1 AT4G01680 33.784 148 86 2 43 189 11 147 1.31e-22 94.0
MS.gene83879.t1 AT4G17785 46.939 98 49 2 46 141 15 111 1.37e-22 95.9
MS.gene83879.t1 AT2G32460 42.857 105 57 2 46 148 20 123 1.48e-22 97.1
MS.gene83879.t1 AT3G01140 41.379 116 66 2 46 159 14 129 1.49e-22 95.5
MS.gene83879.t1 AT1G57560 40.870 115 64 3 46 157 14 127 1.52e-22 95.1
MS.gene83879.t1 AT4G26930 40.187 107 63 1 46 151 21 127 1.70e-22 95.9
MS.gene83879.t1 AT3G01140 41.379 116 66 2 46 159 57 172 1.77e-22 95.9
MS.gene83879.t1 AT2G32460 42.857 105 57 2 46 148 8 111 1.80e-22 96.7
MS.gene83879.t1 AT5G07690 45.361 97 52 1 46 141 14 110 1.84e-22 95.1
MS.gene83879.t1 AT5G26660 36.429 140 85 3 43 179 11 149 2.17e-22 95.1
MS.gene83879.t1 AT1G25340 40.336 119 70 1 33 150 7 125 2.31e-22 94.0
MS.gene83879.t1 AT1G25340 39.831 118 67 1 33 150 7 120 2.33e-22 94.0
MS.gene83879.t1 AT5G52260 48.544 103 50 2 46 146 14 115 2.53e-22 93.6
MS.gene83879.t1 AT5G15310 41.379 116 66 2 46 159 14 129 3.11e-22 94.4
MS.gene83879.t1 AT5G15310 41.379 116 66 2 46 159 14 129 3.20e-22 94.4
MS.gene83879.t1 AT1G09540 43.119 109 57 3 46 150 14 121 3.49e-22 94.7
MS.gene83879.t1 AT1G25340 39.831 118 67 1 33 150 7 120 3.66e-22 94.0
MS.gene83879.t1 AT4G01680 33.784 148 86 2 43 189 11 147 4.24e-22 94.4
MS.gene83879.t1 AT3G28470 44.211 95 52 1 46 139 14 108 4.37e-22 94.0
MS.gene83879.t1 AT4G32730 42.105 95 55 0 46 140 87 181 4.38e-22 96.3
MS.gene83879.t1 AT4G32730 42.105 95 55 0 46 140 87 181 4.38e-22 96.3
MS.gene83879.t1 AT4G32730 42.105 95 55 0 46 140 87 181 4.38e-22 96.3
MS.gene83879.t1 AT4G32730 42.105 95 55 0 46 140 87 181 4.38e-22 96.3
MS.gene83879.t1 AT4G21440 47.423 97 50 1 46 141 14 110 4.72e-22 94.4
MS.gene83879.t1 AT4G32730 42.105 95 55 0 46 140 87 181 4.88e-22 95.9
MS.gene83879.t1 AT1G74430 44.118 102 56 1 46 146 14 115 4.98e-22 92.8
MS.gene83879.t1 AT5G35550 41.818 110 63 1 31 139 1 110 5.16e-22 92.4
MS.gene83879.t1 AT3G53200 52.174 69 33 0 79 147 12 80 8.31e-22 90.9
MS.gene83879.t1 AT5G10280 45.918 98 50 2 46 141 14 110 9.23e-22 93.2
MS.gene83879.t1 AT4G00540 40.179 112 64 1 46 154 103 214 9.59e-22 94.0
MS.gene83879.t1 AT1G68320 42.308 104 57 2 49 150 24 126 9.89e-22 92.4
MS.gene83879.t1 AT1G16490 43.396 106 59 1 42 146 12 117 1.02e-21 92.0
MS.gene83879.t1 AT3G13890 44.565 92 50 1 49 139 17 108 1.15e-21 93.2
MS.gene83879.t1 AT3G27920 33.835 133 87 1 41 172 11 143 1.18e-21 90.9
MS.gene83879.t1 AT5G15310 41.379 116 66 2 46 159 14 129 1.38e-21 91.3
MS.gene83879.t1 AT4G00540 40.179 112 64 1 46 154 101 212 1.57e-21 93.6
MS.gene83879.t1 AT1G74080 44.211 95 52 1 46 139 14 108 2.41e-21 92.0
MS.gene83879.t1 AT1G34670 47.368 95 49 1 46 139 14 108 2.99e-21 92.4
MS.gene83879.t1 AT1G18710 42.453 106 59 2 46 149 14 119 3.44e-21 90.5
MS.gene83879.t1 AT3G61250 44.898 98 51 2 46 141 14 110 3.79e-21 90.9
MS.gene83879.t1 AT1G66230 45.283 106 53 3 46 147 14 118 4.18e-21 90.5
MS.gene83879.t1 AT3G12820 41.748 103 57 2 46 146 16 117 4.97e-21 89.4
MS.gene83879.t1 AT1G35515 40.196 102 60 1 46 146 14 115 6.41e-21 88.6
MS.gene83879.t1 AT5G23000 32.367 207 122 7 42 236 10 210 8.20e-21 90.5
MS.gene83879.t1 AT3G13890 41.584 101 49 2 49 139 17 117 8.46e-21 90.9
MS.gene83879.t1 AT4G38620 42.268 97 55 1 46 141 14 110 8.95e-21 89.7
MS.gene83879.t1 AT1G22640 43.243 111 53 4 46 152 14 118 9.19e-21 89.4
MS.gene83879.t1 AT4G01680 32.500 160 84 3 43 189 11 159 9.21e-21 90.9
MS.gene83879.t1 AT5G65790 42.609 115 60 4 46 158 14 124 1.14e-20 90.9
MS.gene83879.t1 AT5G56110 43.158 95 53 1 46 139 14 108 1.26e-20 90.1
MS.gene83879.t1 AT5G16770 46.316 95 50 1 46 139 14 108 1.26e-20 90.1
MS.gene83879.t1 AT5G16770 46.316 95 50 1 46 139 14 108 1.26e-20 90.1
MS.gene83879.t1 AT1G56160 42.453 106 58 2 43 146 13 117 1.34e-20 89.4
MS.gene83879.t1 AT4G09460 39.815 108 61 2 46 152 14 118 1.73e-20 87.8
MS.gene83879.t1 AT5G16770 45.361 97 52 1 46 141 14 110 1.86e-20 89.7
MS.gene83879.t1 AT5G16770 45.361 97 52 1 46 141 14 110 1.86e-20 89.7
MS.gene83879.t1 AT3G49690 42.609 115 60 3 46 158 14 124 1.94e-20 89.4
MS.gene83879.t1 AT2G16720 41.441 111 55 4 46 152 14 118 2.27e-20 88.2
MS.gene83879.t1 AT5G62470 41.667 96 56 0 46 141 14 109 2.95e-20 89.4
MS.gene83879.t1 AT2G26960 40.952 105 61 1 45 148 21 125 3.48e-20 89.7
MS.gene83879.t1 AT4G34990 42.268 97 55 1 46 141 14 110 3.77e-20 87.8
MS.gene83879.t1 AT4G13480 42.708 96 52 2 46 139 8 102 4.01e-20 87.4
MS.gene83879.t1 AT3G47600 43.299 97 54 1 46 141 14 110 4.04e-20 88.6
MS.gene83879.t1 AT5G55020 39.252 107 64 1 46 151 28 134 4.32e-20 90.1
MS.gene83879.t1 AT5G57620 43.878 98 53 2 46 141 14 111 4.78e-20 88.6
MS.gene83879.t1 AT3G24310 43.750 96 51 2 46 139 20 114 4.91e-20 87.4
MS.gene83879.t1 AT5G59780 38.679 106 62 2 46 149 10 114 5.02e-20 86.7
MS.gene83879.t1 AT5G49620 42.453 106 60 1 46 150 28 133 6.49e-20 87.8
MS.gene83879.t1 AT3G46130 39.623 106 61 2 46 149 11 115 7.32e-20 86.7
MS.gene83879.t1 AT4G12350 43.119 109 57 3 46 150 14 121 8.71e-20 87.0
MS.gene83879.t1 AT1G06180 43.689 103 55 2 46 146 14 115 9.51e-20 86.3
MS.gene83879.t1 AT5G14340 40.385 104 59 2 49 150 29 131 1.21e-19 86.7
MS.gene83879.t1 AT5G16600 42.056 107 59 2 46 150 14 119 1.25e-19 87.4
MS.gene83879.t1 AT3G13540 40.206 97 57 1 46 141 25 121 1.54e-19 85.9
MS.gene83879.t1 AT1G79180 35.252 139 56 2 42 146 12 150 1.70e-19 87.0
MS.gene83879.t1 AT1G08810 43.299 97 54 1 46 141 14 110 2.21e-19 85.9
MS.gene83879.t1 AT1G74650 43.299 97 54 1 46 141 14 110 2.46e-19 86.7
MS.gene83879.t1 AT4G37780 40.367 109 60 3 46 152 14 119 2.67e-19 85.9
MS.gene83879.t1 AT3G62610 39.216 102 61 1 46 146 14 115 3.23e-19 86.3
MS.gene83879.t1 AT2G47460 35.246 122 74 2 46 166 14 131 3.41e-19 86.7
MS.gene83879.t1 AT5G49330 38.235 102 62 1 46 146 14 115 4.05e-19 85.9
MS.gene83879.t1 AT2G31180 41.346 104 59 2 49 150 17 120 5.53e-19 84.3
MS.gene83879.t1 AT4G22680 44.898 98 51 2 46 141 14 110 6.77e-19 84.3
MS.gene83879.t1 AT3G28910 42.268 97 55 1 46 141 14 110 7.20e-19 85.1
MS.gene83879.t1 AT3G60460 41.121 107 61 2 46 150 13 119 8.41e-19 84.7
MS.gene83879.t1 AT1G66370 40.000 105 62 1 46 149 10 114 8.91e-19 83.6
MS.gene83879.t1 AT5G62470 41.237 97 56 1 46 141 14 110 1.05e-18 85.1
MS.gene83879.t1 AT3G27810 40.625 96 55 1 79 172 7 102 2.86e-18 80.5
MS.gene83879.t1 AT3G06490 38.739 111 65 2 46 154 21 130 4.81e-18 82.8
MS.gene83879.t1 AT5G40350 36.207 116 66 3 79 189 8 120 7.28e-18 79.3
MS.gene83879.t1 AT5G14750 50.000 62 31 0 79 140 18 79 7.28e-18 79.3
MS.gene83879.t1 AT2G36890 38.532 109 62 3 49 155 17 122 1.15e-17 81.3
MS.gene83879.t1 AT2G36890 38.532 109 62 3 49 155 58 163 1.51e-17 81.6
MS.gene83879.t1 AT3G12820 50.000 68 34 0 79 146 2 69 1.93e-17 78.6
MS.gene83879.t1 AT5G59780 45.070 71 39 0 79 149 23 93 3.82e-17 78.6
MS.gene83879.t1 AT5G35550 55.738 61 27 0 79 139 53 113 5.56e-17 79.0
MS.gene83879.t1 AT3G46130 45.070 71 39 0 79 149 23 93 8.55e-17 77.8
MS.gene83879.t1 AT2G02820 36.000 100 64 0 49 148 33 132 8.76e-17 79.3
MS.gene83879.t1 AT3G46130 45.070 71 39 0 79 149 13 83 9.50e-17 77.4
MS.gene83879.t1 AT1G56650 37.671 146 83 4 46 190 10 148 9.82e-17 77.8
MS.gene83879.t1 AT5G26660 40.230 87 51 1 79 164 17 103 1.02e-16 79.0
MS.gene83879.t1 AT2G37630 33.117 154 84 3 46 196 4 141 1.20e-16 79.3
MS.gene83879.t1 AT2G02820 36.000 100 64 0 49 148 33 132 1.43e-16 79.3
MS.gene83879.t1 AT2G02820 36.000 100 64 0 49 148 33 132 1.44e-16 79.7
MS.gene83879.t1 AT5G49620 37.190 121 61 2 49 154 31 151 2.09e-16 78.2
MS.gene83879.t1 AT1G14350 35.000 100 65 0 49 148 28 127 2.54e-16 78.6
MS.gene83879.t1 AT1G14350 35.000 100 65 0 49 148 28 127 2.54e-16 78.6
MS.gene83879.t1 AT1G66380 43.299 97 54 1 46 141 10 106 1.22e-15 72.4
MS.gene83879.t1 AT5G62320 37.500 104 55 3 46 140 15 117 2.56e-15 73.9
MS.gene83879.t1 AT3G18100 37.500 88 55 0 46 133 546 633 2.18e-14 73.6
MS.gene83879.t1 AT3G18100 37.500 88 55 0 46 133 498 585 2.59e-14 73.2
MS.gene83879.t1 AT3G18100 37.500 88 55 0 46 133 385 472 3.47e-14 72.8
MS.gene83879.t1 AT3G47600 49.206 63 32 0 79 141 42 104 3.48e-14 72.0
MS.gene83879.t1 AT3G18100 37.500 88 55 0 46 133 333 420 3.59e-14 72.8
MS.gene83879.t1 AT1G66390 43.299 97 54 1 46 141 10 106 4.97e-14 70.5
MS.gene83879.t1 AT1G66380 53.226 62 29 0 79 140 11 72 2.75e-11 59.7
MS.gene83879.t1 AT1G09770 36.957 92 57 1 49 140 10 100 2.87e-11 63.9

Find 57 sgRNAs with CRISPR-Local

Find 94 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCTTCTTCCTTACTTAA+AGG 0.144161 6.1:-9348206 None:intergenic
CGAAATCCCAAAGGGTGTTT+TGG 0.278766 6.1:-9347663 None:intergenic
TTGCAGCTTCATACACTTCA+TGG 0.319080 6.1:+9348236 MS.gene83879:CDS
CACATTTGCAAACACTTTCC+TGG 0.324885 6.1:+9348272 MS.gene83879:CDS
TCTCATAGCACTGCAAGTTT+TGG 0.326446 6.1:-9348803 None:intergenic
TGAGTTTGAATCTGAATGAT+TGG 0.332521 6.1:-9348875 None:intergenic
AGTGCATTGTCTGTCCTTCC+AGG 0.355828 6.1:-9348290 None:intergenic
CAGGGAAAAGCTGTAGATTA+AGG 0.362895 6.1:+9348147 MS.gene83879:intron
GCCTTTACGTAGTTATCAAA+TGG 0.369499 6.1:+9348457 MS.gene83879:CDS
AGATGGTTTCCAATGAGCTT+TGG 0.402226 6.1:-9347759 None:intergenic
GAAAAGTCCAAAACACCCTT+TGG 0.403018 6.1:+9347656 MS.gene83879:CDS
AGGCCTAGTGAGGTTGAGAT+TGG 0.413476 6.1:-9348438 None:intergenic
TTTGCAAATGTGTGCCCATT+TGG 0.423551 6.1:-9348261 None:intergenic
CTTTGGGATTTCGAACCCTC+TGG 0.427781 6.1:+9347673 MS.gene83879:CDS
TGACCATGCTCTCATTAGGT+TGG 0.427843 6.1:-9347700 None:intergenic
CTAAGCCTTCCAAAGCTCAT+TGG 0.430105 6.1:+9347750 MS.gene83879:CDS
ACTATCATCTATTGCAAGAA+AGG 0.451301 6.1:+9348358 MS.gene83879:CDS
CTGAGTCAGCTGCAACAAAC+AGG 0.456378 6.1:+9348911 MS.gene83879:CDS
TTGAGATTGGATTCATCAAT+GGG 0.459066 6.1:-9348425 None:intergenic
AACATTGCTGAACAACTAGA+AGG 0.460555 6.1:+9347836 MS.gene83879:CDS
GTTGAGATTGGATTCATCAA+TGG 0.467181 6.1:-9348426 None:intergenic
ATACACTTCATGGTACCAAA+TGG 0.473150 6.1:+9348246 MS.gene83879:CDS
CAAAAGAGAACCTTTAAGTA+AGG 0.476977 6.1:+9348196 MS.gene83879:CDS
AAAAGTCCAAAACACCCTTT+GGG 0.480946 6.1:+9347657 MS.gene83879:CDS
TTTGAGGGACAGTGAAAATG+TGG 0.489859 6.1:+9348948 MS.gene83879:CDS
GAACAACTAGAAGGAAGAAC+AGG 0.493534 6.1:+9347845 MS.gene83879:CDS
TCTTGGAGTAGGTGATACAT+AGG 0.495278 6.1:+9349002 MS.gene83879:CDS
AAATCATTATCATGTGATCA+AGG 0.497071 6.1:+9348316 MS.gene83879:CDS
CCTTTACGTAGTTATCAAAT+GGG 0.501561 6.1:+9348458 MS.gene83879:CDS
GCTTGACAATGTGAACCAAA+TGG 0.505439 6.1:+9348828 MS.gene83879:CDS
TACACTTCATGGTACCAAAT+GGG 0.518845 6.1:+9348247 MS.gene83879:CDS
ACCTTTAAGTAAGGAAGAAG+AGG 0.519621 6.1:+9348205 MS.gene83879:CDS
TGATCAAGGCTAGGAGGCAA+AGG 0.526772 6.1:+9348330 MS.gene83879:CDS
TTGAATCTGAATGATTGGAT+TGG 0.533488 6.1:-9348870 None:intergenic
AATCCAATCTCAACCTCACT+AGG 0.546026 6.1:+9348435 MS.gene83879:CDS
AAACAACTTATCGCTGATCA+TGG 0.546186 6.1:+9347797 MS.gene83879:CDS
ACTCCCCTTCAGGGTCATGT+TGG 0.552989 6.1:+9347620 MS.gene83879:intron
TTGAGGGACAGTGAAAATGT+GGG 0.555649 6.1:+9348949 MS.gene83879:CDS
CCCATTTGATAACTACGTAA+AGG 0.556445 6.1:-9348458 None:intergenic
CTTGGAGTAGGTGATACATA+GGG 0.561107 6.1:+9349003 MS.gene83879:CDS
TTCATCAATGGGACTTGTGA+TGG 0.566032 6.1:-9348414 None:intergenic
TTTGCAAACACTTTCCTGGA+AGG 0.569534 6.1:+9348276 MS.gene83879:CDS
GGTTTCCAATGAGCTTTGGA+AGG 0.572161 6.1:-9347755 None:intergenic
CATTCAGATTCAAACTCAGA+AGG 0.574102 6.1:+9348880 MS.gene83879:CDS
TTAAGCTTAGCATCTTCAGA+TGG 0.584279 6.1:-9347776 None:intergenic
ATTATCATGTGATCAAGGCT+AGG 0.595859 6.1:+9348321 MS.gene83879:CDS
GATCAAGGCTAGGAGGCAAA+GGG 0.603015 6.1:+9348331 MS.gene83879:CDS
AGAGGGTTCGAAATCCCAAA+GGG 0.606228 6.1:-9347671 None:intergenic
GATCCAACCTAATGAGAGCA+TGG 0.615775 6.1:+9347697 MS.gene83879:CDS
CATTAGGTTGGATCACCAGA+GGG 0.616427 6.1:-9347688 None:intergenic
GCTGCAACAAACAGGAACAA+TGG 0.622569 6.1:+9348919 MS.gene83879:CDS
TCATTAGGTTGGATCACCAG+AGG 0.632806 6.1:-9347689 None:intergenic
ATCATGTGATCAAGGCTAGG+AGG 0.646731 6.1:+9348324 MS.gene83879:CDS
CAGAGGGTTCGAAATCCCAA+AGG 0.650052 6.1:-9347672 None:intergenic
GGAAAAGCTGTAGATTAAGG+TGG 0.661757 6.1:+9348150 MS.gene83879:CDS
AACTACGTAAAGGCCTAGTG+AGG 0.678029 6.1:-9348448 None:intergenic
GGGTCATGTTGGTAACAATG+AGG 0.688477 6.1:+9347631 MS.gene83879:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATCAAACAATTTTAAATAT+TGG + chr6.1:9348507-9348526 MS.gene83879:intron 10.0%
!!! TTAATTTTTTTTTGTGATAA+TGG + chr6.1:9348118-9348137 MS.gene83879:intron 10.0%
!!! TTTTATTGTGTTATATATTT+AGG + chr6.1:9348745-9348764 MS.gene83879:intron 10.0%
!! TGTTTGATAAGATAAAATAA+AGG - chr6.1:9348496-9348515 None:intergenic 15.0%
!!! AAAATTTTCAAGCAATTTAA+AGG - chr6.1:9348632-9348651 None:intergenic 15.0%
!! CAATAAAAAAATCAACAACA+TGG - chr6.1:9348733-9348752 None:intergenic 20.0%
!!! AAAAATTGAACATTTTCAAG+CGG + chr6.1:9348007-9348026 MS.gene83879:intron 20.0%
! AAATCATTATCATGTGATCA+AGG + chr6.1:9348316-9348335 MS.gene83879:CDS 25.0%
!!! GAACAATGGATTAATTTTGA+GGG + chr6.1:9348933-9348952 MS.gene83879:CDS 25.0%
AAAAATGTGTCATGTAGTGT+AGG - chr6.1:9347877-9347896 None:intergenic 30.0%
ACTATCATCTATTGCAAGAA+AGG + chr6.1:9348358-9348377 MS.gene83879:CDS 30.0%
ACTCCAAGAAAGTCAAAAAA+TGG - chr6.1:9348991-9349010 None:intergenic 30.0%
AGGTTTACCTCAAAAAAGAA+TGG + chr6.1:9348765-9348784 MS.gene83879:intron 30.0%
ATCTTTGATTGATGCTGTAT+CGG + chr6.1:9348578-9348597 MS.gene83879:intron 30.0%
ATGAGAATCGTTGTTAAATG+AGG - chr6.1:9348604-9348623 None:intergenic 30.0%
CAAAAGAGAACCTTTAAGTA+AGG + chr6.1:9348196-9348215 MS.gene83879:CDS 30.0%
CCTTTACGTAGTTATCAAAT+GGG + chr6.1:9348458-9348477 MS.gene83879:CDS 30.0%
TGAGTTTGAATCTGAATGAT+TGG - chr6.1:9348878-9348897 None:intergenic 30.0%
TTGAATCTGAATGATTGGAT+TGG - chr6.1:9348873-9348892 None:intergenic 30.0%
TTGAGATTGGATTCATCAAT+GGG - chr6.1:9348428-9348447 None:intergenic 30.0%
! AAAACAATGGAGGGAATTTT+AGG + chr6.1:9347723-9347742 MS.gene83879:CDS 30.0%
! CAATCTTAAGCTTTTCCATT+TGG - chr6.1:9348846-9348865 None:intergenic 30.0%
! CAATTTTAAATATTGGTCCG+CGG + chr6.1:9348514-9348533 MS.gene83879:intron 30.0%
!! TTGTGATAATGGTAATTGCA+GGG + chr6.1:9348129-9348148 MS.gene83879:intron 30.0%
!! TTTGTGATAATGGTAATTGC+AGG + chr6.1:9348128-9348147 MS.gene83879:intron 30.0%
!!! ATGCCATTTTTTGACTTTCT+TGG + chr6.1:9348985-9349004 MS.gene83879:CDS 30.0%
!!! GGAACAATGGATTAATTTTG+AGG + chr6.1:9348932-9348951 MS.gene83879:CDS 30.0%
!!! TTTTTTGACTTTCTTGGAGT+AGG + chr6.1:9348991-9349010 MS.gene83879:CDS 30.0%
AAAAGTCCAAAACACCCTTT+GGG + chr6.1:9347657-9347676 MS.gene83879:CDS 35.0%
AAACAACTTATCGCTGATCA+TGG + chr6.1:9347797-9347816 MS.gene83879:CDS 35.0%
AACATTGCTGAACAACTAGA+AGG + chr6.1:9347836-9347855 MS.gene83879:CDS 35.0%
ACCTTTAAGTAAGGAAGAAG+AGG + chr6.1:9348205-9348224 MS.gene83879:CDS 35.0%
ATACACTTCATGGTACCAAA+TGG + chr6.1:9348246-9348265 MS.gene83879:CDS 35.0%
ATTATCATGTGATCAAGGCT+AGG + chr6.1:9348321-9348340 MS.gene83879:CDS 35.0%
CATTCAGATTCAAACTCAGA+AGG + chr6.1:9348880-9348899 MS.gene83879:CDS 35.0%
GCCTTTACGTAGTTATCAAA+TGG + chr6.1:9348457-9348476 MS.gene83879:CDS 35.0%
GTTGAGATTGGATTCATCAA+TGG - chr6.1:9348429-9348448 None:intergenic 35.0%
TACACTTCATGGTACCAAAT+GGG + chr6.1:9348247-9348266 MS.gene83879:CDS 35.0%
TCCTCTTCTTCCTTACTTAA+AGG - chr6.1:9348209-9348228 None:intergenic 35.0%
TTAAGCTTAGCATCTTCAGA+TGG - chr6.1:9347779-9347798 None:intergenic 35.0%
! AAAGGTTCTCTTTTGATGCT+AGG - chr6.1:9348191-9348210 None:intergenic 35.0%
! ATGATGTAAGTTGAGATGGA+AGG - chr6.1:9347592-9347611 None:intergenic 35.0%
! CCCATTTGATAACTACGTAA+AGG - chr6.1:9348461-9348480 None:intergenic 35.0%
! CTGATCATGGTGCTAAAAAT+TGG + chr6.1:9347810-9347829 MS.gene83879:CDS 35.0%
! GATGATGATGTAAGTTGAGA+TGG - chr6.1:9347596-9347615 None:intergenic 35.0%
! TGATGTAAGTTGAGATGGAA+GGG - chr6.1:9347591-9347610 None:intergenic 35.0%
! TTGTGATGGCAAATTTTGCT+GGG - chr6.1:9348403-9348422 None:intergenic 35.0%
! TTTTTGACCATGCTCTCATT+AGG - chr6.1:9347707-9347726 None:intergenic 35.0%
AATCCAATCTCAACCTCACT+AGG + chr6.1:9348435-9348454 MS.gene83879:CDS 40.0%
AGATGGTTTCCAATGAGCTT+TGG - chr6.1:9347762-9347781 None:intergenic 40.0%
AGCATGGTCAAAAACAATGG+AGG + chr6.1:9347713-9347732 MS.gene83879:CDS 40.0%
CACATTTGCAAACACTTTCC+TGG + chr6.1:9348272-9348291 MS.gene83879:CDS 40.0%
CAGGGAAAAGCTGTAGATTA+AGG + chr6.1:9348147-9348166 MS.gene83879:intron 40.0%
GAAAAGTCCAAAACACCCTT+TGG + chr6.1:9347656-9347675 MS.gene83879:CDS 40.0%
GAACAACTAGAAGGAAGAAC+AGG + chr6.1:9347845-9347864 MS.gene83879:CDS 40.0%
GCATGGTCAAAAACAATGGA+GGG + chr6.1:9347714-9347733 MS.gene83879:CDS 40.0%
GCTTGACAATGTGAACCAAA+TGG + chr6.1:9348828-9348847 MS.gene83879:CDS 40.0%
GGAAAAGCTGTAGATTAAGG+TGG + chr6.1:9348150-9348169 MS.gene83879:CDS 40.0%
TGCAATTATTGTTCTAGCCG+CGG - chr6.1:9348534-9348553 None:intergenic 40.0%
TTCATCAATGGGACTTGTGA+TGG - chr6.1:9348417-9348436 None:intergenic 40.0%
TTGAGGGACAGTGAAAATGT+GGG + chr6.1:9348949-9348968 MS.gene83879:CDS 40.0%
TTGCAGCTTCATACACTTCA+TGG + chr6.1:9348236-9348255 MS.gene83879:CDS 40.0%
TTTGAGGGACAGTGAAAATG+TGG + chr6.1:9348948-9348967 MS.gene83879:CDS 40.0%
TTTGCAAACACTTTCCTGGA+AGG + chr6.1:9348276-9348295 MS.gene83879:CDS 40.0%
TTTGCAAATGTGTGCCCATT+TGG - chr6.1:9348264-9348283 None:intergenic 40.0%
! CTTGTGATGGCAAATTTTGC+TGG - chr6.1:9348404-9348423 None:intergenic 40.0%
! GAGAGCATGGTCAAAAACAA+TGG + chr6.1:9347710-9347729 MS.gene83879:CDS 40.0%
! TCTCATAGCACTGCAAGTTT+TGG - chr6.1:9348806-9348825 None:intergenic 40.0%
!!! GCTTCTGCCATTCTTTTTTG+AGG - chr6.1:9348775-9348794 None:intergenic 40.0%
AACTACGTAAAGGCCTAGTG+AGG - chr6.1:9348451-9348470 None:intergenic 45.0%
AGAGGGTTCGAAATCCCAAA+GGG - chr6.1:9347674-9347693 None:intergenic 45.0%
ATCATCTTCTACTCCCCTTC+AGG + chr6.1:9347610-9347629 MS.gene83879:intron 45.0%
ATCATGTGATCAAGGCTAGG+AGG + chr6.1:9348324-9348343 MS.gene83879:CDS 45.0%
CTAAGCCTTCCAAAGCTCAT+TGG + chr6.1:9347750-9347769 MS.gene83879:CDS 45.0%
GATCCAACCTAATGAGAGCA+TGG + chr6.1:9347697-9347716 MS.gene83879:CDS 45.0%
GCTGCAACAAACAGGAACAA+TGG + chr6.1:9348919-9348938 MS.gene83879:CDS 45.0%
GTTACCAACATGACCCTGAA+GGG - chr6.1:9347627-9347646 None:intergenic 45.0%
TCATCTTCTACTCCCCTTCA+GGG + chr6.1:9347611-9347630 MS.gene83879:intron 45.0%
TGACCATGCTCTCATTAGGT+TGG - chr6.1:9347703-9347722 None:intergenic 45.0%
TGTTACCAACATGACCCTGA+AGG - chr6.1:9347628-9347647 None:intergenic 45.0%
TTACCAACATGACCCTGAAG+GGG - chr6.1:9347626-9347645 None:intergenic 45.0%
!! CATTAGGTTGGATCACCAGA+GGG - chr6.1:9347691-9347710 None:intergenic 45.0%
!! GGGTCATGTTGGTAACAATG+AGG + chr6.1:9347631-9347650 MS.gene83879:intron 45.0%
!! GGTTTCCAATGAGCTTTGGA+AGG - chr6.1:9347758-9347777 None:intergenic 45.0%
!! TCATTAGGTTGGATCACCAG+AGG - chr6.1:9347692-9347711 None:intergenic 45.0%
!!! CGAAATCCCAAAGGGTGTTT+TGG - chr6.1:9347666-9347685 None:intergenic 45.0%
AGGCCTAGTGAGGTTGAGAT+TGG - chr6.1:9348441-9348460 None:intergenic 50.0%
AGTGCATTGTCTGTCCTTCC+AGG - chr6.1:9348293-9348312 None:intergenic 50.0%
CAGAGGGTTCGAAATCCCAA+AGG - chr6.1:9347675-9347694 None:intergenic 50.0%
CTGAGTCAGCTGCAACAAAC+AGG + chr6.1:9348911-9348930 MS.gene83879:CDS 50.0%
GATCAAGGCTAGGAGGCAAA+GGG + chr6.1:9348331-9348350 MS.gene83879:CDS 50.0%
TGATCAAGGCTAGGAGGCAA+AGG + chr6.1:9348330-9348349 MS.gene83879:CDS 50.0%
!! CTTTGGGATTTCGAACCCTC+TGG + chr6.1:9347673-9347692 MS.gene83879:CDS 50.0%
ACTCCCCTTCAGGGTCATGT+TGG + chr6.1:9347620-9347639 MS.gene83879:intron 55.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 9347552 9349023 9347552 ID=MS.gene83879
chr6.1 mRNA 9347552 9349023 9347552 ID=MS.gene83879.t1;Parent=MS.gene83879
chr6.1 exon 9347552 9347557 9347552 ID=MS.gene83879.t1.exon1;Parent=MS.gene83879.t1
chr6.1 CDS 9347552 9347557 9347552 ID=cds.MS.gene83879.t1;Parent=MS.gene83879.t1
chr6.1 exon 9347632 9347866 9347632 ID=MS.gene83879.t1.exon2;Parent=MS.gene83879.t1
chr6.1 CDS 9347632 9347866 9347632 ID=cds.MS.gene83879.t1;Parent=MS.gene83879.t1
chr6.1 exon 9348150 9348479 9348150 ID=MS.gene83879.t1.exon3;Parent=MS.gene83879.t1
chr6.1 CDS 9348150 9348479 9348150 ID=cds.MS.gene83879.t1;Parent=MS.gene83879.t1
chr6.1 exon 9348767 9349023 9348767 ID=MS.gene83879.t1.exon4;Parent=MS.gene83879.t1
chr6.1 CDS 9348767 9349023 9348767 ID=cds.MS.gene83879.t1;Parent=MS.gene83879.t1
Gene Sequence

>MS.gene83879

ATGATGGTTATGGTTTCTCTTTAGACTTGAAAATTTCCCTTCCATCTCAACTTACATCATCATCTTCTACTCCCCTTCAGGGTCATGTTGGTAACAATGAGGCTGAAAAGTCCAAAACACCCTTTGGGATTTCGAACCCTCTGGTGATCCAACCTAATGAGAGCATGGTCAAAAACAATGGAGGGAATTTTAGGAACACTAAGCCTTCCAAAGCTCATTGGAAACCATCTGAAGATGCTAAGCTTAAACAACTTATCGCTGATCATGGTGCTAAAAATTGGAACAACATTGCTGAACAACTAGAAGGAAGAACAGGTTTGATCCTACACTACATGACACATTTTTATTTATTAAATTTTAAAAAAATTTACTAATTTATTTTTTAACGAAAAGTTTTTTTTAATATTGTTAATAATTAATTTTTAATTTAATTTTTTTACAAAAATAAGTATTTAAAAAATTGAACATTTTCAAGCGGTACGTTTAGTATTTTTATTAAAATTGCATAAGTATTTTATTTTGATTAGACATTTCTTTAATTTCGATATTTATTTGTAATTTAACATTTAATTTTTTTTTGTGATAATGGTAATTGCAGGGAAAAGCTGTAGATTAAGGTGGCTTAATCAGCTAGATCCTAGCATCAAAAGAGAACCTTTAAGTAAGGAAGAAGAGGAGATGCTTTTGCAGCTTCATACACTTCATGGTACCAAATGGGCACACATTTGCAAACACTTTCCTGGAAGGACAGACAATGCACTGAAAAATCATTATCATGTGATCAAGGCTAGGAGGCAAAGGGAACTACTATCATCTATTGCAAGAAAGGAAAAGCTAACATATGAAATCCCAGCAAAATTTGCCATCACAAGTCCCATTGATGAATCCAATCTCAACCTCACTAGGCCTTTACGTAGTTATCAAATGGGTATACTTTGAATCCTTTATTTTATCTTATCAAACAATTTTAAATATTGGTCCGCGGCTAGAACAATAATTGCAATATCATTTTTTTTATGTCTTTGCATCTTTGATTGATGCTGTATCGGCCTCATTTAACAACGATTCTCATTTAAACCTTTAAATTGCTTGAAAATTTTGTTATCTTCTCTCATGTCTTAGTTTATGTTAAATATCATATACAGTATTAATTTACTTGACATATGATATATTTTTGACCATGTTGTTGATTTTTTTATTGTGTTATATATTTAGGTTTACCTCAAAAAAGAATGGCAGAAGCTGAATTTGCCAAAACTTGCAGTGCTATGAGAGAGCTTGACAATGTGAACCAAATGGAAAAGCTTAAGATTGCAGACCAATCCAATCATTCAGATTCAAACTCAGAAGGTTCATCATCTGAGTCAGCTGCAACAAACAGGAACAATGGATTAATTTTGAGGGACAGTGAAAATGTGGGAGATATGATTAAGATGCCATTTTTTGACTTTCTTGGAGTAGGTGATACATAG
Protein sequence

>MS.gene83879.t1

MMGHVGNNEAEKSKTPFGISNPLVIQPNESMVKNNGGNFRNTKPSKAHWKPSEDAKLKQLIADHGAKNWNNIAEQLEGRTGKSCRLRWLNQLDPSIKREPLSKEEEEMLLQLHTLHGTKWAHICKHFPGRTDNALKNHYHVIKARRQRELLSSIARKEKLTYEIPAKFAITSPIDESNLNLTRPLRSYQMGLPQKRMAEAEFAKTCSAMRELDNVNQMEKLKIADQSNHSDSNSEGSSSESAATNRNNGLILRDSENVGDMIKMPFFDFLGVGDT