Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84005.t1 | RHN78917.1 | 92.5 | 588 | 33 | 2 | 1 | 578 | 17 | 603 | 6.9e-309 | 1069.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84005.t1 | Q10EL1 | 48.6 | 662 | 274 | 23 | 10 | 628 | 65 | 703 | 2.5e-150 | 533.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84005.t1 | A0A072TPV6 | 92.5 | 588 | 33 | 2 | 1 | 578 | 17 | 603 | 5.0e-309 | 1069.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene84005.t1 | TF | C3H |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84005.t1 | MTR_1g050438 | 92.517 | 588 | 33 | 2 | 1 | 578 | 1 | 587 | 0.0 | 1040 |
MS.gene84005.t1 | MTR_0728s0020 | 92.517 | 588 | 33 | 2 | 1 | 578 | 17 | 603 | 0.0 | 1040 |
MS.gene84005.t1 | MTR_3g029590 | 55.766 | 685 | 237 | 19 | 1 | 638 | 31 | 696 | 0.0 | 637 |
MS.gene84005.t1 | MTR_7g092070 | 53.274 | 672 | 264 | 20 | 1 | 637 | 33 | 689 | 0.0 | 595 |
MS.gene84005.t1 | MTR_3g435590 | 46.593 | 455 | 179 | 5 | 1 | 451 | 18 | 412 | 7.78e-133 | 398 |
MS.gene84005.t1 | MTR_5g082830 | 34.985 | 666 | 326 | 20 | 15 | 626 | 30 | 642 | 3.04e-110 | 347 |
MS.gene84005.t1 | MTR_5g071070 | 36.041 | 677 | 322 | 19 | 15 | 628 | 35 | 663 | 1.64e-108 | 343 |
MS.gene84005.t1 | MTR_1g075890 | 48.494 | 332 | 150 | 4 | 14 | 343 | 32 | 344 | 1.66e-101 | 323 |
MS.gene84005.t1 | MTR_3g435680 | 46.465 | 396 | 149 | 10 | 64 | 451 | 5 | 345 | 5.53e-100 | 311 |
MS.gene84005.t1 | MTR_5g071070 | 35.828 | 628 | 293 | 18 | 64 | 628 | 1 | 581 | 9.70e-96 | 307 |
MS.gene84005.t1 | MTR_3g070880 | 42.771 | 332 | 130 | 4 | 14 | 345 | 9 | 280 | 2.00e-87 | 282 |
MS.gene84005.t1 | MTR_3g464260 | 33.855 | 511 | 234 | 17 | 1 | 494 | 11 | 434 | 8.31e-70 | 236 |
MS.gene84005.t1 | MTR_3g464280 | 30.836 | 574 | 258 | 17 | 36 | 603 | 37 | 477 | 3.51e-59 | 207 |
MS.gene84005.t1 | MTR_8g102100 | 61.345 | 119 | 46 | 0 | 224 | 342 | 77 | 195 | 7.89e-50 | 178 |
MS.gene84005.t1 | MTR_6g090380 | 65.421 | 107 | 37 | 0 | 224 | 330 | 99 | 205 | 7.83e-49 | 175 |
MS.gene84005.t1 | MTR_2g090605 | 63.964 | 111 | 40 | 0 | 228 | 338 | 77 | 187 | 6.56e-48 | 174 |
MS.gene84005.t1 | MTR_3g103960 | 61.468 | 109 | 41 | 1 | 223 | 330 | 48 | 156 | 8.83e-46 | 164 |
MS.gene84005.t1 | MTR_4g078660 | 57.944 | 107 | 45 | 0 | 224 | 330 | 56 | 162 | 1.44e-43 | 159 |
MS.gene84005.t1 | MTR_3g464270 | 34.363 | 259 | 131 | 6 | 226 | 472 | 7 | 238 | 6.93e-38 | 144 |
MS.gene84005.t1 | MTR_3g464290 | 57.143 | 98 | 41 | 1 | 205 | 301 | 77 | 174 | 1.02e-33 | 135 |
MS.gene84005.t1 | MTR_1g050442 | 73.810 | 42 | 11 | 0 | 597 | 638 | 1 | 42 | 5.72e-13 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84005.t1 | AT2G41900 | 48.281 | 669 | 291 | 18 | 1 | 638 | 34 | 678 | 0.0 | 535 |
MS.gene84005.t1 | AT5G12850 | 47.706 | 654 | 288 | 23 | 5 | 628 | 32 | 661 | 1.74e-174 | 513 |
MS.gene84005.t1 | AT5G58620 | 37.107 | 636 | 309 | 20 | 12 | 621 | 11 | 581 | 1.54e-110 | 345 |
MS.gene84005.t1 | AT2G40140 | 35.266 | 638 | 298 | 18 | 15 | 638 | 33 | 569 | 9.98e-100 | 317 |
MS.gene84005.t1 | AT2G40140 | 35.266 | 638 | 298 | 18 | 15 | 638 | 33 | 569 | 9.98e-100 | 317 |
MS.gene84005.t1 | AT3G55980 | 39.904 | 416 | 198 | 8 | 15 | 423 | 30 | 400 | 3.38e-93 | 299 |
MS.gene84005.t1 | AT3G55980 | 40.625 | 416 | 195 | 9 | 15 | 423 | 97 | 467 | 1.60e-92 | 300 |
MS.gene84005.t1 | AT1G03790 | 59.859 | 142 | 49 | 3 | 206 | 343 | 64 | 201 | 3.82e-51 | 182 |
MS.gene84005.t1 | AT2G25900 | 63.636 | 110 | 40 | 0 | 224 | 333 | 86 | 195 | 8.00e-51 | 179 |
MS.gene84005.t1 | AT2G25900 | 63.636 | 110 | 40 | 0 | 224 | 333 | 86 | 195 | 8.00e-51 | 179 |
MS.gene84005.t1 | AT5G07500 | 58.678 | 121 | 50 | 0 | 210 | 330 | 34 | 154 | 2.15e-49 | 172 |
MS.gene84005.t1 | AT2G19810 | 63.964 | 111 | 40 | 0 | 224 | 334 | 74 | 184 | 3.86e-49 | 176 |
MS.gene84005.t1 | AT4G29190 | 54.167 | 144 | 65 | 1 | 224 | 367 | 75 | 217 | 1.14e-48 | 174 |
MS.gene84005.t1 | AT5G44260 | 56.204 | 137 | 53 | 2 | 198 | 333 | 36 | 166 | 1.70e-46 | 169 |
Find 156 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTTCAAGCTTTGCATATT+AGG | 0.177408 | 1.3:-32056616 | None:intergenic |
AGTTCTGGTTTGCTTGAAAA+TGG | 0.189066 | 1.3:+32056724 | MS.gene84005:CDS |
AACAACAGAGGAAGGGATTT+TGG | 0.205426 | 1.3:-32057880 | None:intergenic |
CAAGCCCCTTTCCTGAATTC+AGG | 0.227916 | 1.3:-32057018 | None:intergenic |
CGATTAATGAGGCGGGAATT+TGG | 0.252456 | 1.3:+32056308 | MS.gene84005:CDS |
AATTCTTGAGAAACTTCTTT+TGG | 0.276329 | 1.3:+32056639 | MS.gene84005:CDS |
AGGCCACTGCCTTCGTTAAC+TGG | 0.276593 | 1.3:+32057183 | MS.gene84005:CDS |
TCTGTTGATTCTTCTAGTTC+TGG | 0.291419 | 1.3:+32056709 | MS.gene84005:CDS |
AAAATCCCTTCCTCTGTTGT+TGG | 0.292864 | 1.3:+32057882 | MS.gene84005:CDS |
GCATGCCTTGCCCTGAATTC+AGG | 0.298337 | 1.3:+32057007 | MS.gene84005:CDS |
TTGATGGTTGCTGCCACTTA+TGG | 0.302833 | 1.3:+32056382 | MS.gene84005:CDS |
GCCCTTCACTGTGCTGCTTC+TGG | 0.307051 | 1.3:+32056484 | MS.gene84005:CDS |
TAGGCCTAGTTGTAATAAAA+AGG | 0.309683 | 1.3:+32057128 | MS.gene84005:CDS |
CTCATTCTCAAGTGCTGCTT+GGG | 0.310662 | 1.3:+32057359 | MS.gene84005:CDS |
AATAGATTAAATTTGCGAAT+TGG | 0.323983 | 1.3:-32058120 | None:intergenic |
AATTCAGGAAAGGGGCTTGC+AGG | 0.326756 | 1.3:+32057022 | MS.gene84005:CDS |
TCCTAGTTCTTGTCGGTCTA+AGG | 0.332234 | 1.3:+32057539 | MS.gene84005:CDS |
GGCTGCTGCAATGAATCTTT+TGG | 0.332820 | 1.3:+32057260 | MS.gene84005:CDS |
TGAGCACAAAACTCCTTTGA+TGG | 0.333522 | 1.3:+32056366 | MS.gene84005:CDS |
TCATTTGAACATAAAATCAT+TGG | 0.355518 | 1.3:+32057999 | MS.gene84005:CDS |
ATTTGGTACGGTCGACAAAA+TGG | 0.358517 | 1.3:+32056325 | MS.gene84005:CDS |
AATATGCTGAGCTATTTAGA+TGG | 0.359724 | 1.3:+32057471 | MS.gene84005:CDS |
ATATCTGATTGGTCGTTATA+TGG | 0.363137 | 1.3:+32057942 | MS.gene84005:CDS |
AAGACGATGCTCATCATTCT+TGG | 0.366937 | 1.3:-32057736 | None:intergenic |
CCAGTTGATCCATCATTTCC+TGG | 0.368573 | 1.3:+32056826 | MS.gene84005:CDS |
ATGAGGATGCATTGTGCATT+TGG | 0.377230 | 1.3:-32057980 | None:intergenic |
CTCAGCATATTGAAGTCTTC+AGG | 0.382631 | 1.3:-32057459 | None:intergenic |
AGCTGCATAGTGTTAGTTCT+AGG | 0.387153 | 1.3:+32057847 | MS.gene84005:CDS |
TGGGCACAGCAAAATGTTCT+AGG | 0.387831 | 1.3:+32057378 | MS.gene84005:CDS |
TTCTCTCCGGGATGCACATA+TGG | 0.394353 | 1.3:-32056946 | None:intergenic |
CCCGTTCACAATCTCATGAT+TGG | 0.398242 | 1.3:+32056914 | MS.gene84005:CDS |
CTGCCTTCGTTAACTGGATC+TGG | 0.398343 | 1.3:+32057189 | MS.gene84005:CDS |
CCAGGAAATGATGGATCAAC+TGG | 0.407420 | 1.3:-32056826 | None:intergenic |
TCTCATTCTCAAGTGCTGCT+TGG | 0.415243 | 1.3:+32057358 | MS.gene84005:CDS |
AGTCGTGTTCGATACTGATC+TGG | 0.416868 | 1.3:-32057096 | None:intergenic |
TGAGGGCTCAGTGGGGAGAC+TGG | 0.425522 | 1.3:-32057786 | None:intergenic |
TGTATGCAAACGATGAATTT+CGG | 0.427602 | 1.3:+32056863 | MS.gene84005:CDS |
CTCCTCCGAGCCTTCTCTCC+GGG | 0.428697 | 1.3:-32056958 | None:intergenic |
GGGAATTATTCTGTAGGACT+TGG | 0.433684 | 1.3:-32058049 | None:intergenic |
AAGAGGTCTTCAAGATTTGA+TGG | 0.444188 | 1.3:-32057570 | None:intergenic |
TTTCAATCTAGTAGTCGGTT+GGG | 0.445265 | 1.3:+32057408 | MS.gene84005:CDS |
AACTGGATACTGTTTATTCT+CGG | 0.446949 | 1.3:-32056809 | None:intergenic |
AACTTCTCTGTATTCGTCTC+AGG | 0.452345 | 1.3:-32058074 | None:intergenic |
GGAACAACAATGAGATCAAC+AGG | 0.452808 | 1.3:-32056592 | None:intergenic |
CTCTGTTGTTGGACCACCTA+CGG | 0.455551 | 1.3:+32057893 | MS.gene84005:CDS |
AAGAAGAGCCTAATCTATCA+TGG | 0.461395 | 1.3:+32058024 | MS.gene84005:CDS |
CTTCACTGTGCTGCTTCTGG+TGG | 0.465162 | 1.3:+32056487 | MS.gene84005:CDS |
TGGTAGTATTGATGTTATGA+AGG | 0.465621 | 1.3:+32056402 | MS.gene84005:CDS |
AAGCCCCTTTCCTGAATTCA+GGG | 0.466005 | 1.3:-32057017 | None:intergenic |
AGGAAAGGGGCTTGCAGGCA+TGG | 0.466664 | 1.3:+32057027 | MS.gene84005:CDS |
GACCAATCAGATATCTCATT+AGG | 0.468837 | 1.3:-32057933 | None:intergenic |
TCTCCTCCGAGCCTTCTCTC+CGG | 0.470377 | 1.3:-32056959 | None:intergenic |
ACAAAATTTCCGCAGAAAAG+AGG | 0.471696 | 1.3:-32057587 | None:intergenic |
CATTTGAACATAAAATCATT+GGG | 0.474936 | 1.3:+32058000 | MS.gene84005:CDS |
AACATCAATACTACCATAAG+TGG | 0.474991 | 1.3:-32056395 | None:intergenic |
AACCCGGTCCTAGTTCTTGT+CGG | 0.478599 | 1.3:+32057532 | MS.gene84005:CDS |
AGTGTTAGTTCTAGGGAACT+TGG | 0.481159 | 1.3:+32057855 | MS.gene84005:CDS |
GAAGGTTATACTCTCGTATC+CGG | 0.481900 | 1.3:+32056420 | MS.gene84005:CDS |
GAGGAAATGCAGACATTTGA+GGG | 0.482099 | 1.3:-32057803 | None:intergenic |
GACAGCATATTAGTATTTGA+AGG | 0.484710 | 1.3:-32057711 | None:intergenic |
TTCACTGTGCTGCTTCTGGT+GGG | 0.489511 | 1.3:+32056488 | MS.gene84005:CDS |
AGACGATGCTCATCATTCTT+GGG | 0.490668 | 1.3:-32057735 | None:intergenic |
ACCTCTGATAATATATCTGT+TGG | 0.492831 | 1.3:+32056667 | MS.gene84005:CDS |
CTCATGGAATATTCGAGTGC+TGG | 0.497753 | 1.3:+32057067 | MS.gene84005:CDS |
CTTGCCCTGAATTCAGGAAA+GGG | 0.500592 | 1.3:+32057013 | MS.gene84005:CDS |
AACAGCTCAAGTCATTCATA+AGG | 0.503787 | 1.3:-32057503 | None:intergenic |
TGAGGAAATGCAGACATTTG+AGG | 0.507215 | 1.3:-32057804 | None:intergenic |
GAAGCAAGTACCAGTAAACT+TGG | 0.508787 | 1.3:-32056232 | None:intergenic |
GTGAGGATTCTTATTTCCGC+GGG | 0.510979 | 1.3:+32056532 | MS.gene84005:CDS |
CAGACATTTGAGGGCTCAGT+GGG | 0.513831 | 1.3:-32057794 | None:intergenic |
GTCACCACCTTCTCCTGTGG+TGG | 0.515604 | 1.3:+32056774 | MS.gene84005:CDS |
GATGGAAGTAAGAGACTGAC+GGG | 0.516673 | 1.3:-32057293 | None:intergenic |
GAACACGACTCTGTAAAGAT+AGG | 0.519096 | 1.3:+32057109 | MS.gene84005:CDS |
CTCCTAATGAGATATCTGAT+TGG | 0.519165 | 1.3:+32057931 | MS.gene84005:CDS |
ACCAGAAGCAGCACAGTGAA+GGG | 0.521479 | 1.3:-32056485 | None:intergenic |
AGGCTCGGAGGAGAGACCTT+AGG | 0.523990 | 1.3:+32056968 | MS.gene84005:CDS |
GTTAGTTGTGTCAATAGCAA+TGG | 0.528128 | 1.3:+32056562 | MS.gene84005:CDS |
TTCAAGCTTTGCATATTAGG+AGG | 0.529947 | 1.3:-32056613 | None:intergenic |
TTCTCTGTATTCGTCTCAGG+TGG | 0.532355 | 1.3:-32058071 | None:intergenic |
TTCGAATCCACCACAGGAGA+AGG | 0.533536 | 1.3:-32056781 | None:intergenic |
CTCTGTATTCGTCTCAGGTG+GGG | 0.535371 | 1.3:-32058069 | None:intergenic |
AGGAGCTTCTTCGATTAATG+AGG | 0.538092 | 1.3:+32056297 | MS.gene84005:CDS |
CCAATCATGAGATTGTGAAC+GGG | 0.538143 | 1.3:-32056914 | None:intergenic |
GGTGACACTGAAGGAGGGTA+TGG | 0.540320 | 1.3:-32056757 | None:intergenic |
ATATGCTGAGCTATTTAGAT+GGG | 0.543705 | 1.3:+32057472 | MS.gene84005:CDS |
CACCAGAAGCAGCACAGTGA+AGG | 0.545082 | 1.3:-32056486 | None:intergenic |
GCTGCATAGTGTTAGTTCTA+GGG | 0.553291 | 1.3:+32057848 | MS.gene84005:CDS |
TGCATCCCGGAGAGAAGGCT+CGG | 0.553406 | 1.3:+32056953 | MS.gene84005:CDS |
AGACCGACAAGAACTAGGAC+CGG | 0.553527 | 1.3:-32057535 | None:intergenic |
AGCTTCTTCGATTAATGAGG+CGG | 0.556906 | 1.3:+32056300 | MS.gene84005:CDS |
TCCAATCATGAGATTGTGAA+CGG | 0.559478 | 1.3:-32056915 | None:intergenic |
GCTTCTCACAATGACTCTGA+AGG | 0.563152 | 1.3:+32056250 | MS.gene84005:CDS |
GGTGGTCCAACAACAGAGGA+AGG | 0.567580 | 1.3:-32057888 | None:intergenic |
CAGGCTGAATGTTGCAAGCG+CGG | 0.567752 | 1.3:-32057440 | None:intergenic |
GCTTCTTCGATTAATGAGGC+GGG | 0.570758 | 1.3:+32056301 | MS.gene84005:CDS |
CTCGGAGGAGAGACCTTAGG+AGG | 0.570887 | 1.3:+32056971 | MS.gene84005:CDS |
GCCTTAGACCGACAAGAACT+AGG | 0.575103 | 1.3:-32057540 | None:intergenic |
GTAAATTTCGAATCCACCAC+AGG | 0.575410 | 1.3:-32056787 | None:intergenic |
TGATGTGAATTCCGCTTGCA+TGG | 0.576297 | 1.3:+32056447 | MS.gene84005:CDS |
ATAGCAGCTGATTCATGTGA+AGG | 0.576310 | 1.3:-32057654 | None:intergenic |
TAGCAGCTGATTCATGTGAA+GGG | 0.576933 | 1.3:-32057653 | None:intergenic |
TTGGACCACCTACGGACCCA+TGG | 0.576953 | 1.3:+32057901 | MS.gene84005:CDS |
GCGGAATTCACATCAACCTC+CGG | 0.577460 | 1.3:-32056439 | None:intergenic |
TAAGTGGCAGCAACCATCAA+AGG | 0.581005 | 1.3:-32056379 | None:intergenic |
ATGAGATGCCATTTCCAGAA+GGG | 0.584083 | 1.3:-32057341 | None:intergenic |
GTCGTGTTCGATACTGATCT+GGG | 0.586400 | 1.3:-32057095 | None:intergenic |
ATATGTGCATCCCGGAGAGA+AGG | 0.587617 | 1.3:+32056948 | MS.gene84005:CDS |
GATAAGTGTGAATATGCTCA+TGG | 0.587938 | 1.3:+32057051 | MS.gene84005:CDS |
GATGCAGATGAACGTGGTGA+AGG | 0.588152 | 1.3:-32057216 | None:intergenic |
AGAAGAGCCTAATCTATCAT+GGG | 0.588660 | 1.3:+32058025 | MS.gene84005:CDS |
CCTTGCCCTGAATTCAGGAA+AGG | 0.589700 | 1.3:+32057012 | MS.gene84005:CDS |
ACTTGGACCCATGATAGATT+AGG | 0.592397 | 1.3:-32058032 | None:intergenic |
CCTTTCCTGAATTCAGGGCA+AGG | 0.594200 | 1.3:-32057012 | None:intergenic |
CACACGATGAAAAGGAATTG+AGG | 0.597745 | 1.3:+32057163 | MS.gene84005:CDS |
TTGCCCTGAATTCAGGAAAG+GGG | 0.599832 | 1.3:+32057014 | MS.gene84005:CDS |
AGTGTCACCACCTTCTCCTG+TGG | 0.600051 | 1.3:+32056771 | MS.gene84005:CDS |
GACCGACAAGAACTAGGACC+GGG | 0.601622 | 1.3:-32057534 | None:intergenic |
TTGAGCTGTTTCTCACAACC+CGG | 0.602356 | 1.3:+32057516 | MS.gene84005:CDS |
ACAACTAACATTTGCACCCG+CGG | 0.603059 | 1.3:-32056548 | None:intergenic |
TAGGTATTCTGACCCAGCAA+TGG | 0.603203 | 1.3:+32057617 | MS.gene84005:CDS |
CGGTCGACAAAATGGCTCTA+CGG | 0.603364 | 1.3:+32056333 | MS.gene84005:CDS |
AGCTGTAAGAGAACCTCCTA+AGG | 0.606098 | 1.3:-32056984 | None:intergenic |
TCTCTGTATTCGTCTCAGGT+GGG | 0.607073 | 1.3:-32058070 | None:intergenic |
AATGAGGCGGGAATTTGGTA+CGG | 0.609266 | 1.3:+32056313 | MS.gene84005:CDS |
TGCTGCTGTTTCTCGCGATG+AGG | 0.610108 | 1.3:-32057822 | None:intergenic |
AGCAGCTGATTCATGTGAAG+GGG | 0.610846 | 1.3:-32057652 | None:intergenic |
GATCCAGTTAACGAAGGCAG+TGG | 0.612013 | 1.3:-32057186 | None:intergenic |
TAAGACCATGGGTCCGTAGG+TGG | 0.612212 | 1.3:-32057906 | None:intergenic |
TGTGAGGATTCTTATTTCCG+CGG | 0.612292 | 1.3:+32056531 | MS.gene84005:CDS |
GAGTGTCCATATGTGCATCC+CGG | 0.612767 | 1.3:+32056940 | MS.gene84005:CDS |
CAGGTGGGGAATTATTCTGT+AGG | 0.615860 | 1.3:-32058055 | None:intergenic |
GGATGGAAGTAAGAGACTGA+CGG | 0.616567 | 1.3:-32057294 | None:intergenic |
TGAGATGCCATTTCCAGAAG+GGG | 0.617123 | 1.3:-32057340 | None:intergenic |
CTAATGTTGTTGATGCTGTG+AGG | 0.619443 | 1.3:+32056515 | MS.gene84005:CDS |
GAATAAGACCATGGGTCCGT+AGG | 0.624229 | 1.3:-32057909 | None:intergenic |
CATTAGGAGAATAAGACCAT+GGG | 0.624382 | 1.3:-32057917 | None:intergenic |
ACCAACAGATATATTATCAG+AGG | 0.629394 | 1.3:-32056668 | None:intergenic |
GAAGGTGGTGACACTGAAGG+AGG | 0.631733 | 1.3:-32056763 | None:intergenic |
GGAGAAGGTGGTGACACTGA+AGG | 0.632383 | 1.3:-32056766 | None:intergenic |
TCATTAGGAGAATAAGACCA+TGG | 0.632729 | 1.3:-32057918 | None:intergenic |
AATGAGATGCCATTTCCAGA+AGG | 0.634273 | 1.3:-32057342 | None:intergenic |
GCAGACATTTGAGGGCTCAG+TGG | 0.644297 | 1.3:-32057795 | None:intergenic |
GAATCCACCACAGGAGAAGG+TGG | 0.649733 | 1.3:-32056778 | None:intergenic |
GTGGTCCAACAACAGAGGAA+GGG | 0.664346 | 1.3:-32057887 | None:intergenic |
CGTAGGTGGTCCAACAACAG+AGG | 0.665010 | 1.3:-32057892 | None:intergenic |
ATTGTGAACGGGAACAACGA+AGG | 0.665165 | 1.3:-32056903 | None:intergenic |
ATTGCTGGGTCAGAATACCT+AGG | 0.669043 | 1.3:-32057615 | None:intergenic |
ATCCCGGAGAGAAGGCTCGG+AGG | 0.669076 | 1.3:+32056956 | MS.gene84005:CDS |
AAGGTGGTGACACTGAAGGA+GGG | 0.677347 | 1.3:-32056762 | None:intergenic |
GGTTATACTCTCGTATCCGG+AGG | 0.688899 | 1.3:+32056423 | MS.gene84005:CDS |
GAGATGCCATTTCCAGAAGG+GGG | 0.701139 | 1.3:-32057339 | None:intergenic |
ACGCCAGATCCAGTTAACGA+AGG | 0.708633 | 1.3:-32057192 | None:intergenic |
AAAGCAGATGCAGATGAACG+TGG | 0.708647 | 1.3:-32057222 | None:intergenic |
ATGGAAGTAAGAGACTGACG+GGG | 0.742388 | 1.3:-32057292 | None:intergenic |
TGGAAGTAAGAGACTGACGG+GGG | 0.784123 | 1.3:-32057291 | None:intergenic |
AGACATTTGAGGGCTCAGTG+GGG | 0.787595 | 1.3:-32057793 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATTTGAACATAAAATCATT+GGG | + | chr1.3:32058000-32058019 | MS.gene84005:CDS | 20.0% |
!! | TCATTTGAACATAAAATCAT+TGG | + | chr1.3:32057999-32058018 | MS.gene84005:CDS | 20.0% |
!!! | AATGATTTTATGTTCAAATG+AGG | - | chr1.3:32058000-32058019 | None:intergenic | 20.0% |
!! | AATTCTTGAGAAACTTCTTT+TGG | + | chr1.3:32056639-32056658 | MS.gene84005:CDS | 25.0% |
!! | TTTTACAAGCTTCATTTAGA+AGG | + | chr1.3:32057757-32057776 | MS.gene84005:CDS | 25.0% |
!!! | TTTTTTATACCAGGAAATGA+TGG | - | chr1.3:32056838-32056857 | None:intergenic | 25.0% |
AACATCAATACTACCATAAG+TGG | - | chr1.3:32056398-32056417 | None:intergenic | 30.0% | |
AACTGGATACTGTTTATTCT+CGG | - | chr1.3:32056812-32056831 | None:intergenic | 30.0% | |
AATATGCTGAGCTATTTAGA+TGG | + | chr1.3:32057471-32057490 | MS.gene84005:CDS | 30.0% | |
ACCAACAGATATATTATCAG+AGG | - | chr1.3:32056671-32056690 | None:intergenic | 30.0% | |
ACCTCTGATAATATATCTGT+TGG | + | chr1.3:32056667-32056686 | MS.gene84005:CDS | 30.0% | |
ACTTTCAAGCTTTGCATATT+AGG | - | chr1.3:32056619-32056638 | None:intergenic | 30.0% | |
ATATGCTGAGCTATTTAGAT+GGG | + | chr1.3:32057472-32057491 | MS.gene84005:CDS | 30.0% | |
GACAGCATATTAGTATTTGA+AGG | - | chr1.3:32057714-32057733 | None:intergenic | 30.0% | |
TAGGCCTAGTTGTAATAAAA+AGG | + | chr1.3:32057128-32057147 | MS.gene84005:CDS | 30.0% | |
TGTATGCAAACGATGAATTT+CGG | + | chr1.3:32056863-32056882 | MS.gene84005:CDS | 30.0% | |
! | AAGCTTCTTTTAGACAAAGA+AGG | + | chr1.3:32056277-32056296 | MS.gene84005:CDS | 30.0% |
! | ATATCTGATTGGTCGTTATA+TGG | + | chr1.3:32057942-32057961 | MS.gene84005:CDS | 30.0% |
! | ATTTCGGATGTTTTCTTTCA+AGG | + | chr1.3:32056879-32056898 | MS.gene84005:CDS | 30.0% |
! | CACACCTTTTTATTACAACT+AGG | - | chr1.3:32057135-32057154 | None:intergenic | 30.0% |
! | GCAATTTTCAATCTAGTAGT+CGG | + | chr1.3:32057403-32057422 | MS.gene84005:CDS | 30.0% |
!! | TGGTAGTATTGATGTTATGA+AGG | + | chr1.3:32056402-32056421 | MS.gene84005:CDS | 30.0% |
!!! | TACATGCTGTTTTTTATACC+AGG | - | chr1.3:32056847-32056866 | None:intergenic | 30.0% |
AAAAAACAGAAGCCATTGCT+GGG | - | chr1.3:32057632-32057651 | None:intergenic | 35.0% | |
AACAGCTCAAGTCATTCATA+AGG | - | chr1.3:32057506-32057525 | None:intergenic | 35.0% | |
AAGAAGAGCCTAATCTATCA+TGG | + | chr1.3:32058024-32058043 | MS.gene84005:CDS | 35.0% | |
AAGAGGTCTTCAAGATTTGA+TGG | - | chr1.3:32057573-32057592 | None:intergenic | 35.0% | |
ACAAAATTTCCGCAGAAAAG+AGG | - | chr1.3:32057590-32057609 | None:intergenic | 35.0% | |
AGAAGAGCCTAATCTATCAT+GGG | + | chr1.3:32058025-32058044 | MS.gene84005:CDS | 35.0% | |
ATAGGCTGGGAAAAATTAGA+TGG | - | chr1.3:32057318-32057337 | None:intergenic | 35.0% | |
CATTAGGAGAATAAGACCAT+GGG | - | chr1.3:32057920-32057939 | None:intergenic | 35.0% | |
CTCCTAATGAGATATCTGAT+TGG | + | chr1.3:32057931-32057950 | MS.gene84005:CDS | 35.0% | |
GACCAATCAGATATCTCATT+AGG | - | chr1.3:32057936-32057955 | None:intergenic | 35.0% | |
GATAAGTGTGAATATGCTCA+TGG | + | chr1.3:32057051-32057070 | MS.gene84005:CDS | 35.0% | |
GTTAGTTGTGTCAATAGCAA+TGG | + | chr1.3:32056562-32056581 | MS.gene84005:CDS | 35.0% | |
TCATTAGGAGAATAAGACCA+TGG | - | chr1.3:32057921-32057940 | None:intergenic | 35.0% | |
TCCAATCATGAGATTGTGAA+CGG | - | chr1.3:32056918-32056937 | None:intergenic | 35.0% | |
TTCAAGCTTTGCATATTAGG+AGG | - | chr1.3:32056616-32056635 | None:intergenic | 35.0% | |
TTTCAATCTAGTAGTCGGTT+GGG | + | chr1.3:32057408-32057427 | MS.gene84005:CDS | 35.0% | |
! | AGACTCTTTTCCAAGTTTAC+TGG | + | chr1.3:32056222-32056241 | MS.gene84005:CDS | 35.0% |
! | TGCTTTTAATGCGATGGAAT+TGG | + | chr1.3:32057239-32057258 | MS.gene84005:CDS | 35.0% |
! | TTTTCAATCTAGTAGTCGGT+TGG | + | chr1.3:32057407-32057426 | MS.gene84005:CDS | 35.0% |
!! | AGTTCTGGTTTGCTTGAAAA+TGG | + | chr1.3:32056724-32056743 | MS.gene84005:CDS | 35.0% |
!! | TCTGTTGATTCTTCTAGTTC+TGG | + | chr1.3:32056709-32056728 | MS.gene84005:CDS | 35.0% |
!!! | TTTTTTCGCACACGATGAAA+AGG | + | chr1.3:32057155-32057174 | MS.gene84005:CDS | 35.0% |
AAAATCCCTTCCTCTGTTGT+TGG | + | chr1.3:32057882-32057901 | MS.gene84005:CDS | 40.0% | |
AACTTCTCTGTATTCGTCTC+AGG | - | chr1.3:32058077-32058096 | None:intergenic | 40.0% | |
AAGACGATGCTCATCATTCT+TGG | - | chr1.3:32057739-32057758 | None:intergenic | 40.0% | |
ACTTGGACCCATGATAGATT+AGG | - | chr1.3:32058035-32058054 | None:intergenic | 40.0% | |
AGACGATGCTCATCATTCTT+GGG | - | chr1.3:32057738-32057757 | None:intergenic | 40.0% | |
AGCTTCTTCGATTAATGAGG+CGG | + | chr1.3:32056300-32056319 | MS.gene84005:CDS | 40.0% | |
AGGAGCTTCTTCGATTAATG+AGG | + | chr1.3:32056297-32056316 | MS.gene84005:CDS | 40.0% | |
ATGAGGATGCATTGTGCATT+TGG | - | chr1.3:32057983-32058002 | None:intergenic | 40.0% | |
ATTTGGTACGGTCGACAAAA+TGG | + | chr1.3:32056325-32056344 | MS.gene84005:CDS | 40.0% | |
CACACGATGAAAAGGAATTG+AGG | + | chr1.3:32057163-32057182 | MS.gene84005:CDS | 40.0% | |
CCAATCATGAGATTGTGAAC+GGG | - | chr1.3:32056917-32056936 | None:intergenic | 40.0% | |
CTAATGTTGTTGATGCTGTG+AGG | + | chr1.3:32056515-32056534 | MS.gene84005:CDS | 40.0% | |
CTCAGCATATTGAAGTCTTC+AGG | - | chr1.3:32057462-32057481 | None:intergenic | 40.0% | |
GAAAAAACAGAAGCCATTGC+TGG | - | chr1.3:32057633-32057652 | None:intergenic | 40.0% | |
GAACACGACTCTGTAAAGAT+AGG | + | chr1.3:32057109-32057128 | MS.gene84005:CDS | 40.0% | |
GAAGCAAGTACCAGTAAACT+TGG | - | chr1.3:32056235-32056254 | None:intergenic | 40.0% | |
GAAGGTTATACTCTCGTATC+CGG | + | chr1.3:32056420-32056439 | MS.gene84005:CDS | 40.0% | |
GAGGAAATGCAGACATTTGA+GGG | - | chr1.3:32057806-32057825 | None:intergenic | 40.0% | |
GCTGGGAAAAATTAGATGGA+TGG | - | chr1.3:32057314-32057333 | None:intergenic | 40.0% | |
GGAACAACAATGAGATCAAC+AGG | - | chr1.3:32056595-32056614 | None:intergenic | 40.0% | |
GGGAATTATTCTGTAGGACT+TGG | - | chr1.3:32058052-32058071 | None:intergenic | 40.0% | |
GTAAATTTCGAATCCACCAC+AGG | - | chr1.3:32056790-32056809 | None:intergenic | 40.0% | |
TGAGCACAAAACTCCTTTGA+TGG | + | chr1.3:32056366-32056385 | MS.gene84005:CDS | 40.0% | |
TGAGGAAATGCAGACATTTG+AGG | - | chr1.3:32057807-32057826 | None:intergenic | 40.0% | |
! | AACAACAGAGGAAGGGATTT+TGG | - | chr1.3:32057883-32057902 | None:intergenic | 40.0% |
! | AATGAGATGCCATTTCCAGA+AGG | - | chr1.3:32057345-32057364 | None:intergenic | 40.0% |
! | AGCTGCATAGTGTTAGTTCT+AGG | + | chr1.3:32057847-32057866 | MS.gene84005:CDS | 40.0% |
! | ATAGCAGCTGATTCATGTGA+AGG | - | chr1.3:32057657-32057676 | None:intergenic | 40.0% |
! | ATGAGATGCCATTTCCAGAA+GGG | - | chr1.3:32057344-32057363 | None:intergenic | 40.0% |
! | CGGAAATTTTGTCATCTCCT+AGG | + | chr1.3:32057598-32057617 | MS.gene84005:CDS | 40.0% |
! | GCTGCAATGAATCTTTTGGT+CGG | + | chr1.3:32057264-32057283 | MS.gene84005:CDS | 40.0% |
! | TAGCAGCTGATTCATGTGAA+GGG | - | chr1.3:32057656-32057675 | None:intergenic | 40.0% |
! | TCTTGAAGACCTCTTTTCTG+CGG | + | chr1.3:32057578-32057597 | MS.gene84005:CDS | 40.0% |
! | TGTGAGGATTCTTATTTCCG+CGG | + | chr1.3:32056531-32056550 | MS.gene84005:CDS | 40.0% |
!! | AGTGTTAGTTCTAGGGAACT+TGG | + | chr1.3:32057855-32057874 | MS.gene84005:CDS | 40.0% |
!! | GCTGCATAGTGTTAGTTCTA+GGG | + | chr1.3:32057848-32057867 | MS.gene84005:CDS | 40.0% |
!! | TGCATCTGCTTTTAATGCGA+TGG | + | chr1.3:32057233-32057252 | MS.gene84005:CDS | 40.0% |
AAAGCAGATGCAGATGAACG+TGG | - | chr1.3:32057225-32057244 | None:intergenic | 45.0% | |
AAGCCCCTTTCCTGAATTCA+GGG | - | chr1.3:32057020-32057039 | None:intergenic | 45.0% | |
AATGAGGCGGGAATTTGGTA+CGG | + | chr1.3:32056313-32056332 | MS.gene84005:CDS | 45.0% | |
ACAACTAACATTTGCACCCG+CGG | - | chr1.3:32056551-32056570 | None:intergenic | 45.0% | |
AGCTGTAAGAGAACCTCCTA+AGG | - | chr1.3:32056987-32057006 | None:intergenic | 45.0% | |
AGTCGTGTTCGATACTGATC+TGG | - | chr1.3:32057099-32057118 | None:intergenic | 45.0% | |
ATGGAAGTAAGAGACTGACG+GGG | - | chr1.3:32057295-32057314 | None:intergenic | 45.0% | |
ATTGCTGGGTCAGAATACCT+AGG | - | chr1.3:32057618-32057637 | None:intergenic | 45.0% | |
ATTGTGAACGGGAACAACGA+AGG | - | chr1.3:32056906-32056925 | None:intergenic | 45.0% | |
CAGGTGGGGAATTATTCTGT+AGG | - | chr1.3:32058058-32058077 | None:intergenic | 45.0% | |
CCAGTTGATCCATCATTTCC+TGG | + | chr1.3:32056826-32056845 | MS.gene84005:CDS | 45.0% | |
CCCGTTCACAATCTCATGAT+TGG | + | chr1.3:32056914-32056933 | MS.gene84005:CDS | 45.0% | |
CGATTAATGAGGCGGGAATT+TGG | + | chr1.3:32056308-32056327 | MS.gene84005:CDS | 45.0% | |
CTCATGGAATATTCGAGTGC+TGG | + | chr1.3:32057067-32057086 | MS.gene84005:CDS | 45.0% | |
CTTGCCCTGAATTCAGGAAA+GGG | + | chr1.3:32057013-32057032 | MS.gene84005:CDS | 45.0% | |
GATGGAAGTAAGAGACTGAC+GGG | - | chr1.3:32057296-32057315 | None:intergenic | 45.0% | |
GCTTCTCACAATGACTCTGA+AGG | + | chr1.3:32056250-32056269 | MS.gene84005:CDS | 45.0% | |
GCTTCTTCGATTAATGAGGC+GGG | + | chr1.3:32056301-32056320 | MS.gene84005:CDS | 45.0% | |
GGATGGAAGTAAGAGACTGA+CGG | - | chr1.3:32057297-32057316 | None:intergenic | 45.0% | |
GTCGTGTTCGATACTGATCT+GGG | - | chr1.3:32057098-32057117 | None:intergenic | 45.0% | |
TAAGTGGCAGCAACCATCAA+AGG | - | chr1.3:32056382-32056401 | None:intergenic | 45.0% | |
TAGGTATTCTGACCCAGCAA+TGG | + | chr1.3:32057617-32057636 | MS.gene84005:CDS | 45.0% | |
TCTCTGTATTCGTCTCAGGT+GGG | - | chr1.3:32058073-32058092 | None:intergenic | 45.0% | |
TGATGTGAATTCCGCTTGCA+TGG | + | chr1.3:32056447-32056466 | MS.gene84005:CDS | 45.0% | |
TGGGCACAGCAAAATGTTCT+AGG | + | chr1.3:32057378-32057397 | MS.gene84005:CDS | 45.0% | |
TTCTCTGTATTCGTCTCAGG+TGG | - | chr1.3:32058074-32058093 | None:intergenic | 45.0% | |
TTGCCCTGAATTCAGGAAAG+GGG | + | chr1.3:32057014-32057033 | MS.gene84005:CDS | 45.0% | |
! | ACTTTTGTTCGCCATGCAAG+CGG | - | chr1.3:32056461-32056480 | None:intergenic | 45.0% |
! | AGCAGCTGATTCATGTGAAG+GGG | - | chr1.3:32057655-32057674 | None:intergenic | 45.0% |
! | GGCTGCTGCAATGAATCTTT+TGG | + | chr1.3:32057260-32057279 | MS.gene84005:CDS | 45.0% |
! | GTGAGGATTCTTATTTCCGC+GGG | + | chr1.3:32056532-32056551 | MS.gene84005:CDS | 45.0% |
! | TCCTAGTTCTTGTCGGTCTA+AGG | + | chr1.3:32057539-32057558 | MS.gene84005:CDS | 45.0% |
! | TCTCATTCTCAAGTGCTGCT+TGG | + | chr1.3:32057358-32057377 | MS.gene84005:CDS | 45.0% |
! | TGAGATGCCATTTCCAGAAG+GGG | - | chr1.3:32057343-32057362 | None:intergenic | 45.0% |
! | TTGATGGTTGCTGCCACTTA+TGG | + | chr1.3:32056382-32056401 | MS.gene84005:CDS | 45.0% |
!! | CCAGGAAATGATGGATCAAC+TGG | - | chr1.3:32056829-32056848 | None:intergenic | 45.0% |
!! | CTCATTCTCAAGTGCTGCTT+GGG | + | chr1.3:32057359-32057378 | MS.gene84005:CDS | 45.0% |
!! | TTGAGCTGTTTCTCACAACC+CGG | + | chr1.3:32057516-32057535 | MS.gene84005:CDS | 45.0% |
AAGGTGGTGACACTGAAGGA+GGG | - | chr1.3:32056765-32056784 | None:intergenic | 50.0% | |
AATTCAGGAAAGGGGCTTGC+AGG | + | chr1.3:32057022-32057041 | MS.gene84005:CDS | 50.0% | |
ACCAGAAGCAGCACAGTGAA+GGG | - | chr1.3:32056488-32056507 | None:intergenic | 50.0% | |
ACGCCAGATCCAGTTAACGA+AGG | - | chr1.3:32057195-32057214 | None:intergenic | 50.0% | |
AGACATTTGAGGGCTCAGTG+GGG | - | chr1.3:32057796-32057815 | None:intergenic | 50.0% | |
AGACCGACAAGAACTAGGAC+CGG | - | chr1.3:32057538-32057557 | None:intergenic | 50.0% | |
ATATGTGCATCCCGGAGAGA+AGG | + | chr1.3:32056948-32056967 | MS.gene84005:CDS | 50.0% | |
CAAGCCCCTTTCCTGAATTC+AGG | - | chr1.3:32057021-32057040 | None:intergenic | 50.0% | |
CAGACATTTGAGGGCTCAGT+GGG | - | chr1.3:32057797-32057816 | None:intergenic | 50.0% | |
CCTTGCCCTGAATTCAGGAA+AGG | + | chr1.3:32057012-32057031 | MS.gene84005:CDS | 50.0% | |
CCTTTCCTGAATTCAGGGCA+AGG | - | chr1.3:32057015-32057034 | None:intergenic | 50.0% | |
CTCTGTATTCGTCTCAGGTG+GGG | - | chr1.3:32058072-32058091 | None:intergenic | 50.0% | |
CTCTGTTGTTGGACCACCTA+CGG | + | chr1.3:32057893-32057912 | MS.gene84005:CDS | 50.0% | |
CTGCCTTCGTTAACTGGATC+TGG | + | chr1.3:32057189-32057208 | MS.gene84005:CDS | 50.0% | |
GAATAAGACCATGGGTCCGT+AGG | - | chr1.3:32057912-32057931 | None:intergenic | 50.0% | |
GAGTGTCCATATGTGCATCC+CGG | + | chr1.3:32056940-32056959 | MS.gene84005:CDS | 50.0% | |
GATCCAGTTAACGAAGGCAG+TGG | - | chr1.3:32057189-32057208 | None:intergenic | 50.0% | |
GATGCAGATGAACGTGGTGA+AGG | - | chr1.3:32057219-32057238 | None:intergenic | 50.0% | |
GCCTTAGACCGACAAGAACT+AGG | - | chr1.3:32057543-32057562 | None:intergenic | 50.0% | |
GCGGAATTCACATCAACCTC+CGG | - | chr1.3:32056442-32056461 | None:intergenic | 50.0% | |
GGTTATACTCTCGTATCCGG+AGG | + | chr1.3:32056423-32056442 | MS.gene84005:CDS | 50.0% | |
GTGGTCCAACAACAGAGGAA+GGG | - | chr1.3:32057890-32057909 | None:intergenic | 50.0% | |
TGGAAGTAAGAGACTGACGG+GGG | - | chr1.3:32057294-32057313 | None:intergenic | 50.0% | |
TTCGAATCCACCACAGGAGA+AGG | - | chr1.3:32056784-32056803 | None:intergenic | 50.0% | |
TTCTCTCCGGGATGCACATA+TGG | - | chr1.3:32056949-32056968 | None:intergenic | 50.0% | |
! | AACCCGGTCCTAGTTCTTGT+CGG | + | chr1.3:32057532-32057551 | MS.gene84005:CDS | 50.0% |
! | CGGTCGACAAAATGGCTCTA+CGG | + | chr1.3:32056333-32056352 | MS.gene84005:CDS | 50.0% |
! | GAGATGCCATTTCCAGAAGG+GGG | - | chr1.3:32057342-32057361 | None:intergenic | 50.0% |
!! | TTCACTGTGCTGCTTCTGGT+GGG | + | chr1.3:32056488-32056507 | MS.gene84005:CDS | 50.0% |
AGGCCACTGCCTTCGTTAAC+TGG | + | chr1.3:32057183-32057202 | MS.gene84005:CDS | 55.0% | |
AGTGTCACCACCTTCTCCTG+TGG | + | chr1.3:32056771-32056790 | MS.gene84005:CDS | 55.0% | |
CACCAGAAGCAGCACAGTGA+AGG | - | chr1.3:32056489-32056508 | None:intergenic | 55.0% | |
CAGGCTGAATGTTGCAAGCG+CGG | - | chr1.3:32057443-32057462 | None:intergenic | 55.0% | |
CGTAGGTGGTCCAACAACAG+AGG | - | chr1.3:32057895-32057914 | None:intergenic | 55.0% | |
GAAGGTGGTGACACTGAAGG+AGG | - | chr1.3:32056766-32056785 | None:intergenic | 55.0% | |
GAATCCACCACAGGAGAAGG+TGG | - | chr1.3:32056781-32056800 | None:intergenic | 55.0% | |
GACCGACAAGAACTAGGACC+GGG | - | chr1.3:32057537-32057556 | None:intergenic | 55.0% | |
GCAGACATTTGAGGGCTCAG+TGG | - | chr1.3:32057798-32057817 | None:intergenic | 55.0% | |
GCATGCCTTGCCCTGAATTC+AGG | + | chr1.3:32057007-32057026 | MS.gene84005:CDS | 55.0% | |
GGAGAAGGTGGTGACACTGA+AGG | - | chr1.3:32056769-32056788 | None:intergenic | 55.0% | |
GGTGACACTGAAGGAGGGTA+TGG | - | chr1.3:32056760-32056779 | None:intergenic | 55.0% | |
GGTGGTCCAACAACAGAGGA+AGG | - | chr1.3:32057891-32057910 | None:intergenic | 55.0% | |
TAAGACCATGGGTCCGTAGG+TGG | - | chr1.3:32057909-32057928 | None:intergenic | 55.0% | |
! | CCATTTCCAGAAGGGGGCAT+AGG | - | chr1.3:32057336-32057355 | None:intergenic | 55.0% |
! | CCTATGCCCCCTTCTGGAAA+TGG | + | chr1.3:32057333-32057352 | MS.gene84005:CDS | 55.0% |
!! | CTTCACTGTGCTGCTTCTGG+TGG | + | chr1.3:32056487-32056506 | MS.gene84005:CDS | 55.0% |
!! | TGCTGCTGTTTCTCGCGATG+AGG | - | chr1.3:32057825-32057844 | None:intergenic | 55.0% |
AGGAAAGGGGCTTGCAGGCA+TGG | + | chr1.3:32057027-32057046 | MS.gene84005:CDS | 60.0% | |
AGGCTCGGAGGAGAGACCTT+AGG | + | chr1.3:32056968-32056987 | MS.gene84005:CDS | 60.0% | |
CTCGGAGGAGAGACCTTAGG+AGG | + | chr1.3:32056971-32056990 | MS.gene84005:CDS | 60.0% | |
GTCACCACCTTCTCCTGTGG+TGG | + | chr1.3:32056774-32056793 | MS.gene84005:CDS | 60.0% | |
TCTCCTCCGAGCCTTCTCTC+CGG | - | chr1.3:32056962-32056981 | None:intergenic | 60.0% | |
TGCATCCCGGAGAGAAGGCT+CGG | + | chr1.3:32056953-32056972 | MS.gene84005:CDS | 60.0% | |
TTGGACCACCTACGGACCCA+TGG | + | chr1.3:32057901-32057920 | MS.gene84005:CDS | 60.0% | |
! | TCCAGAAGGGGGCATAGGCT+GGG | - | chr1.3:32057331-32057350 | None:intergenic | 60.0% |
! | TTCCAGAAGGGGGCATAGGC+TGG | - | chr1.3:32057332-32057351 | None:intergenic | 60.0% |
!! | GCCCTTCACTGTGCTGCTTC+TGG | + | chr1.3:32056484-32056503 | MS.gene84005:CDS | 60.0% |
ATCCCGGAGAGAAGGCTCGG+AGG | + | chr1.3:32056956-32056975 | MS.gene84005:CDS | 65.0% | |
CTCCTCCGAGCCTTCTCTCC+GGG | - | chr1.3:32056961-32056980 | None:intergenic | 65.0% | |
TCCCAGCCTATGCCCCCTTC+TGG | + | chr1.3:32057327-32057346 | MS.gene84005:CDS | 65.0% | |
TGAGGGCTCAGTGGGGAGAC+TGG | - | chr1.3:32057789-32057808 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 32056196 | 32058136 | 32056196 | ID=MS.gene84005 |
chr1.3 | mRNA | 32056196 | 32058136 | 32056196 | ID=MS.gene84005.t1;Parent=MS.gene84005 |
chr1.3 | exon | 32056196 | 32058136 | 32056196 | ID=MS.gene84005.t1.exon1;Parent=MS.gene84005.t1 |
chr1.3 | CDS | 32056196 | 32058136 | 32056196 | ID=cds.MS.gene84005.t1;Parent=MS.gene84005.t1 |
Gene Sequence |
Protein sequence |