Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84141.t1 | XP_003602195.1 | 96.5 | 340 | 12 | 0 | 1 | 340 | 1 | 340 | 1.10E-183 | 652.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84141.t1 | Q8H0Y8 | 35.6 | 351 | 164 | 12 | 3 | 336 | 7 | 312 | 8.3e-36 | 152.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84141.t1 | B3U399 | 96.5 | 340 | 12 | 0 | 1 | 340 | 1 | 340 | 7.7e-184 | 652.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene84141.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84141.t1 | MTR_3g090860 | 96.765 | 340 | 11 | 0 | 1 | 340 | 1 | 340 | 0.0 | 683 |
MS.gene84141.t1 | MTR_8g099350 | 37.330 | 367 | 180 | 15 | 7 | 340 | 12 | 361 | 4.75e-55 | 184 |
MS.gene84141.t1 | MTR_7g117200 | 34.746 | 354 | 173 | 12 | 7 | 340 | 12 | 327 | 2.11e-50 | 171 |
MS.gene84141.t1 | MTR_8g027860 | 35.833 | 360 | 170 | 15 | 7 | 334 | 12 | 342 | 1.23e-45 | 159 |
MS.gene84141.t1 | MTR_7g073430 | 33.333 | 204 | 102 | 4 | 2 | 197 | 9 | 186 | 9.15e-26 | 104 |
MS.gene84141.t1 | MTR_7g073380 | 32.487 | 197 | 97 | 5 | 7 | 194 | 15 | 184 | 1.04e-24 | 102 |
MS.gene84141.t1 | MTR_5g067680 | 62.500 | 64 | 24 | 0 | 129 | 192 | 198 | 261 | 2.44e-23 | 99.4 |
MS.gene84141.t1 | MTR_8g005750 | 32.273 | 220 | 120 | 6 | 8 | 227 | 6 | 196 | 5.51e-21 | 91.7 |
MS.gene84141.t1 | MTR_3g093830 | 32.579 | 221 | 109 | 10 | 13 | 221 | 23 | 215 | 1.49e-20 | 90.9 |
MS.gene84141.t1 | MTR_0002s1250 | 29.000 | 200 | 116 | 4 | 1 | 198 | 1 | 176 | 5.91e-20 | 88.2 |
MS.gene84141.t1 | MTR_2g075690 | 31.220 | 205 | 106 | 7 | 5 | 192 | 14 | 200 | 9.18e-19 | 85.5 |
MS.gene84141.t1 | MTR_5g067700 | 42.697 | 89 | 51 | 0 | 104 | 192 | 77 | 165 | 1.35e-18 | 84.0 |
MS.gene84141.t1 | MTR_2g075750 | 39.583 | 96 | 58 | 0 | 132 | 227 | 27 | 122 | 1.61e-18 | 82.4 |
MS.gene84141.t1 | MTR_1g009613 | 40.441 | 136 | 54 | 8 | 84 | 200 | 207 | 334 | 3.02e-18 | 84.7 |
MS.gene84141.t1 | MTR_5g073620 | 42.683 | 82 | 45 | 1 | 125 | 206 | 664 | 743 | 1.58e-17 | 84.3 |
MS.gene84141.t1 | MTR_2g075610 | 30.625 | 160 | 91 | 4 | 104 | 263 | 11 | 150 | 1.75e-17 | 79.7 |
MS.gene84141.t1 | MTR_2g075680 | 31.034 | 203 | 116 | 5 | 5 | 192 | 14 | 207 | 5.19e-17 | 80.9 |
MS.gene84141.t1 | MTR_2g075700 | 39.773 | 88 | 45 | 1 | 105 | 192 | 124 | 203 | 6.27e-17 | 80.5 |
MS.gene84141.t1 | MTR_8g028565 | 42.105 | 95 | 50 | 2 | 134 | 225 | 156 | 248 | 1.40e-16 | 79.7 |
MS.gene84141.t1 | MTR_7g079010 | 34.532 | 139 | 81 | 3 | 67 | 203 | 80 | 210 | 1.81e-16 | 77.8 |
MS.gene84141.t1 | MTR_5g016610 | 44.828 | 87 | 44 | 3 | 104 | 190 | 172 | 254 | 2.03e-16 | 78.6 |
MS.gene84141.t1 | MTR_7g079040 | 31.746 | 189 | 120 | 4 | 103 | 284 | 124 | 310 | 4.93e-16 | 78.2 |
MS.gene84141.t1 | MTR_8g098945 | 51.562 | 64 | 29 | 1 | 127 | 190 | 123 | 184 | 5.36e-16 | 77.4 |
MS.gene84141.t1 | MTR_4g094908 | 41.509 | 106 | 48 | 6 | 101 | 199 | 236 | 334 | 6.44e-16 | 77.8 |
MS.gene84141.t1 | MTR_1g070455 | 56.140 | 57 | 23 | 1 | 134 | 190 | 294 | 348 | 4.50e-15 | 75.9 |
MS.gene84141.t1 | MTR_7g109600 | 54.839 | 62 | 26 | 1 | 129 | 190 | 49 | 108 | 7.59e-15 | 73.9 |
MS.gene84141.t1 | MTR_8g087000 | 55.000 | 60 | 25 | 1 | 131 | 190 | 75 | 132 | 1.51e-14 | 72.8 |
MS.gene84141.t1 | MTR_8g087000 | 55.000 | 60 | 25 | 1 | 131 | 190 | 74 | 131 | 1.54e-14 | 72.8 |
MS.gene84141.t1 | MTR_7g011820 | 47.692 | 65 | 30 | 2 | 126 | 190 | 221 | 281 | 2.03e-14 | 74.3 |
MS.gene84141.t1 | MTR_7g011820 | 50.847 | 59 | 26 | 1 | 132 | 190 | 409 | 464 | 2.59e-13 | 71.2 |
MS.gene84141.t1 | MTR_2g083870 | 39.823 | 113 | 54 | 3 | 86 | 190 | 29 | 135 | 2.27e-14 | 72.4 |
MS.gene84141.t1 | MTR_4g127040 | 36.522 | 115 | 65 | 3 | 81 | 190 | 189 | 300 | 2.43e-14 | 73.2 |
MS.gene84141.t1 | MTR_8g032510 | 48.333 | 60 | 31 | 0 | 133 | 192 | 119 | 178 | 2.93e-14 | 72.4 |
MS.gene84141.t1 | MTR_2g016770 | 51.515 | 66 | 27 | 2 | 128 | 190 | 27 | 90 | 3.15e-14 | 71.2 |
MS.gene84141.t1 | MTR_2g032030 | 43.689 | 103 | 50 | 4 | 134 | 231 | 268 | 367 | 3.23e-14 | 73.6 |
MS.gene84141.t1 | MTR_8g007270 | 52.542 | 59 | 25 | 1 | 132 | 190 | 153 | 208 | 3.25e-14 | 71.2 |
MS.gene84141.t1 | MTR_2g032030 | 43.689 | 103 | 50 | 4 | 134 | 231 | 268 | 367 | 3.48e-14 | 73.6 |
MS.gene84141.t1 | MTR_8g092140 | 52.542 | 59 | 25 | 1 | 132 | 190 | 159 | 214 | 3.69e-14 | 71.2 |
MS.gene84141.t1 | MTR_2g016770 | 51.515 | 66 | 27 | 2 | 128 | 190 | 19 | 82 | 3.87e-14 | 70.9 |
MS.gene84141.t1 | MTR_7g028415 | 53.333 | 60 | 25 | 1 | 132 | 191 | 92 | 148 | 4.26e-14 | 69.7 |
MS.gene84141.t1 | MTR_7g028710 | 53.333 | 60 | 25 | 1 | 132 | 191 | 92 | 148 | 4.26e-14 | 69.7 |
MS.gene84141.t1 | MTR_7g062220 | 55.738 | 61 | 24 | 1 | 130 | 190 | 121 | 178 | 4.32e-14 | 72.4 |
MS.gene84141.t1 | MTR_7g110720 | 51.351 | 74 | 33 | 2 | 118 | 190 | 200 | 271 | 6.16e-14 | 72.8 |
MS.gene84141.t1 | MTR_7g110720 | 51.351 | 74 | 33 | 2 | 118 | 190 | 173 | 244 | 6.60e-14 | 72.4 |
MS.gene84141.t1 | MTR_3g095080 | 52.542 | 59 | 25 | 1 | 132 | 190 | 167 | 222 | 9.40e-14 | 70.5 |
MS.gene84141.t1 | MTR_3g095080 | 52.542 | 59 | 25 | 1 | 132 | 190 | 143 | 198 | 1.19e-13 | 69.7 |
MS.gene84141.t1 | MTR_1g099600 | 41.176 | 85 | 42 | 2 | 106 | 190 | 164 | 240 | 1.56e-13 | 70.9 |
MS.gene84141.t1 | MTR_7g109800 | 51.667 | 60 | 26 | 1 | 132 | 191 | 144 | 200 | 2.20e-13 | 70.1 |
MS.gene84141.t1 | MTR_7g080020 | 53.448 | 58 | 23 | 2 | 133 | 190 | 280 | 333 | 2.29e-13 | 71.6 |
MS.gene84141.t1 | MTR_4g094588 | 44.928 | 69 | 35 | 1 | 132 | 200 | 177 | 242 | 2.55e-13 | 70.5 |
MS.gene84141.t1 | MTR_5g043880 | 52.542 | 59 | 25 | 1 | 132 | 190 | 123 | 178 | 3.32e-13 | 69.3 |
MS.gene84141.t1 | MTR_5g091390 | 49.206 | 63 | 27 | 2 | 132 | 192 | 156 | 215 | 4.89e-13 | 69.3 |
MS.gene84141.t1 | MTR_1g015140 | 50.000 | 60 | 27 | 1 | 132 | 191 | 101 | 157 | 6.26e-13 | 66.2 |
MS.gene84141.t1 | MTR_2g088000 | 54.237 | 59 | 25 | 1 | 132 | 190 | 348 | 404 | 7.17e-13 | 69.7 |
MS.gene84141.t1 | MTR_4g082580 | 50.000 | 58 | 26 | 1 | 133 | 190 | 145 | 199 | 7.47e-13 | 69.3 |
MS.gene84141.t1 | MTR_4g082580 | 47.458 | 59 | 28 | 1 | 132 | 190 | 277 | 332 | 4.60e-11 | 63.9 |
MS.gene84141.t1 | MTR_3g009470 | 51.667 | 60 | 25 | 2 | 131 | 190 | 278 | 333 | 7.50e-13 | 69.7 |
MS.gene84141.t1 | MTR_3g009470 | 51.667 | 60 | 25 | 2 | 131 | 190 | 278 | 333 | 7.75e-13 | 69.7 |
MS.gene84141.t1 | MTR_3g009470 | 33.628 | 113 | 63 | 3 | 132 | 240 | 494 | 598 | 6.43e-12 | 67.0 |
MS.gene84141.t1 | MTR_3g104750 | 48.333 | 60 | 28 | 1 | 132 | 191 | 103 | 159 | 1.58e-12 | 65.1 |
MS.gene84141.t1 | MTR_1g086790 | 50.000 | 60 | 27 | 1 | 132 | 191 | 157 | 213 | 1.61e-12 | 67.8 |
MS.gene84141.t1 | MTR_4g132430 | 51.667 | 60 | 27 | 1 | 132 | 191 | 126 | 183 | 1.62e-12 | 68.2 |
MS.gene84141.t1 | MTR_5g094430 | 49.153 | 59 | 27 | 1 | 132 | 190 | 363 | 418 | 1.78e-12 | 68.6 |
MS.gene84141.t1 | MTR_5g094430 | 47.059 | 68 | 30 | 3 | 125 | 190 | 190 | 253 | 3.42e-11 | 64.7 |
MS.gene84141.t1 | MTR_5g042920 | 46.479 | 71 | 33 | 3 | 121 | 190 | 138 | 204 | 1.97e-12 | 68.2 |
MS.gene84141.t1 | MTR_5g042920 | 49.153 | 59 | 27 | 1 | 132 | 190 | 319 | 374 | 2.99e-12 | 67.8 |
MS.gene84141.t1 | MTR_2g023930 | 52.542 | 59 | 26 | 1 | 132 | 190 | 304 | 360 | 2.10e-12 | 68.2 |
MS.gene84141.t1 | MTR_2g033820 | 50.000 | 60 | 27 | 1 | 132 | 191 | 202 | 258 | 2.12e-12 | 67.8 |
MS.gene84141.t1 | MTR_8g096730 | 44.068 | 59 | 30 | 1 | 132 | 190 | 69 | 124 | 2.18e-12 | 64.3 |
MS.gene84141.t1 | MTR_7g100510 | 34.454 | 119 | 58 | 5 | 87 | 190 | 302 | 415 | 2.33e-12 | 67.8 |
MS.gene84141.t1 | MTR_7g100510 | 50.000 | 60 | 26 | 2 | 131 | 190 | 187 | 242 | 1.15e-11 | 65.9 |
MS.gene84141.t1 | MTR_3g056100 | 49.153 | 59 | 27 | 1 | 132 | 190 | 401 | 456 | 2.76e-12 | 68.2 |
MS.gene84141.t1 | MTR_3g056100 | 47.692 | 65 | 30 | 2 | 126 | 190 | 236 | 296 | 2.62e-11 | 65.1 |
MS.gene84141.t1 | MTR_3g056100 | 49.153 | 59 | 27 | 1 | 132 | 190 | 414 | 469 | 2.95e-12 | 67.8 |
MS.gene84141.t1 | MTR_3g056100 | 47.692 | 65 | 30 | 2 | 126 | 190 | 236 | 296 | 2.77e-11 | 65.1 |
MS.gene84141.t1 | MTR_5g094430 | 49.153 | 59 | 27 | 1 | 132 | 190 | 229 | 284 | 2.96e-12 | 67.4 |
MS.gene84141.t1 | MTR_5g094430 | 47.059 | 68 | 30 | 3 | 125 | 190 | 56 | 119 | 5.05e-11 | 63.9 |
MS.gene84141.t1 | MTR_5g094430 | 49.153 | 59 | 27 | 1 | 132 | 190 | 251 | 306 | 3.02e-12 | 67.8 |
MS.gene84141.t1 | MTR_5g094430 | 47.059 | 68 | 30 | 3 | 125 | 190 | 78 | 141 | 4.68e-11 | 63.9 |
MS.gene84141.t1 | MTR_4g132430 | 51.667 | 60 | 27 | 1 | 132 | 191 | 260 | 317 | 3.36e-12 | 67.8 |
MS.gene84141.t1 | MTR_3g108960 | 50.877 | 57 | 26 | 1 | 134 | 190 | 315 | 369 | 3.90e-12 | 67.0 |
MS.gene84141.t1 | MTR_3g056100 | 49.153 | 59 | 27 | 1 | 132 | 190 | 257 | 312 | 4.24e-12 | 67.0 |
MS.gene84141.t1 | MTR_3g056100 | 47.692 | 65 | 30 | 2 | 126 | 190 | 92 | 152 | 3.67e-11 | 64.3 |
MS.gene84141.t1 | MTR_7g080000 | 52.542 | 59 | 24 | 2 | 132 | 190 | 233 | 287 | 4.56e-12 | 67.4 |
MS.gene84141.t1 | MTR_3g056100 | 49.153 | 59 | 27 | 1 | 132 | 190 | 270 | 325 | 4.65e-12 | 67.0 |
MS.gene84141.t1 | MTR_3g056100 | 47.692 | 65 | 30 | 2 | 126 | 190 | 92 | 152 | 3.88e-11 | 64.3 |
MS.gene84141.t1 | MTR_1g013760 | 52.632 | 57 | 25 | 1 | 134 | 190 | 141 | 195 | 5.68e-12 | 65.9 |
MS.gene84141.t1 | MTR_0117s0040 | 50.877 | 57 | 26 | 1 | 134 | 190 | 75 | 129 | 5.90e-12 | 65.1 |
MS.gene84141.t1 | MTR_2g045360 | 34.247 | 146 | 70 | 5 | 134 | 260 | 212 | 350 | 8.75e-12 | 66.2 |
MS.gene84141.t1 | MTR_5g074400 | 50.000 | 58 | 25 | 2 | 133 | 190 | 243 | 296 | 1.28e-11 | 65.9 |
MS.gene84141.t1 | MTR_5g074400 | 49.153 | 59 | 27 | 1 | 132 | 190 | 419 | 474 | 2.45e-11 | 65.1 |
MS.gene84141.t1 | MTR_3g031220 | 50.000 | 58 | 25 | 2 | 133 | 190 | 198 | 251 | 1.32e-11 | 65.5 |
MS.gene84141.t1 | MTR_8g069935 | 34.524 | 84 | 46 | 3 | 107 | 190 | 312 | 386 | 1.39e-11 | 65.5 |
MS.gene84141.t1 | MTR_3g031220 | 46.032 | 63 | 31 | 1 | 132 | 194 | 364 | 423 | 1.83e-11 | 65.5 |
MS.gene84141.t1 | MTR_3g031220 | 50.000 | 58 | 25 | 2 | 133 | 190 | 198 | 251 | 2.20e-11 | 65.1 |
MS.gene84141.t1 | MTR_4g122530 | 47.458 | 59 | 28 | 1 | 132 | 190 | 207 | 262 | 2.43e-11 | 64.7 |
MS.gene84141.t1 | MTR_7g071120 | 50.000 | 58 | 25 | 2 | 133 | 190 | 166 | 219 | 2.51e-11 | 65.1 |
MS.gene84141.t1 | MTR_8g067635 | 46.552 | 58 | 29 | 1 | 133 | 190 | 349 | 404 | 2.65e-11 | 65.1 |
MS.gene84141.t1 | MTR_4g013260 | 40.909 | 88 | 48 | 2 | 104 | 190 | 306 | 390 | 2.74e-11 | 64.7 |
MS.gene84141.t1 | MTR_4g013260 | 46.552 | 58 | 28 | 2 | 133 | 190 | 184 | 238 | 8.56e-11 | 63.2 |
MS.gene84141.t1 | MTR_5g097490 | 47.541 | 61 | 29 | 1 | 130 | 190 | 249 | 306 | 2.98e-11 | 64.3 |
MS.gene84141.t1 | MTR_8g067650 | 46.552 | 58 | 29 | 1 | 133 | 190 | 339 | 394 | 3.47e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84141.t1 | AT4G11070 | 35.043 | 351 | 166 | 11 | 3 | 336 | 7 | 312 | 8.15e-47 | 161 |
MS.gene84141.t1 | AT4G23810 | 35.688 | 269 | 137 | 8 | 3 | 248 | 10 | 265 | 4.21e-46 | 159 |
MS.gene84141.t1 | AT5G24110 | 40.179 | 224 | 98 | 7 | 5 | 223 | 14 | 206 | 1.55e-42 | 149 |
MS.gene84141.t1 | AT4G11070 | 32.647 | 340 | 157 | 10 | 3 | 336 | 7 | 280 | 2.18e-40 | 143 |
MS.gene84141.t1 | AT2G46400 | 30.631 | 333 | 162 | 12 | 1 | 319 | 2 | 279 | 7.01e-32 | 121 |
MS.gene84141.t1 | AT2G40750 | 32.301 | 226 | 116 | 9 | 5 | 207 | 13 | 224 | 3.33e-25 | 104 |
MS.gene84141.t1 | AT3G56400 | 33.333 | 186 | 107 | 3 | 7 | 192 | 11 | 179 | 4.28e-24 | 100 |
MS.gene84141.t1 | AT2G40740 | 59.677 | 62 | 25 | 0 | 131 | 192 | 171 | 232 | 5.30e-22 | 94.7 |
MS.gene84141.t1 | AT2G40740 | 59.677 | 62 | 25 | 0 | 131 | 192 | 180 | 241 | 6.62e-22 | 94.4 |
MS.gene84141.t1 | AT5G01900 | 28.846 | 208 | 123 | 5 | 5 | 211 | 6 | 189 | 3.27e-17 | 80.5 |
MS.gene84141.t1 | AT5G45260 | 59.649 | 57 | 23 | 0 | 134 | 190 | 1209 | 1265 | 9.40e-17 | 82.0 |
MS.gene84141.t1 | AT1G66550 | 28.125 | 192 | 97 | 4 | 8 | 192 | 10 | 167 | 2.11e-16 | 78.2 |
MS.gene84141.t1 | AT1G64000 | 40.777 | 103 | 50 | 4 | 104 | 203 | 89 | 183 | 4.11e-16 | 76.3 |
MS.gene84141.t1 | AT2G23320 | 46.667 | 90 | 38 | 5 | 104 | 190 | 213 | 295 | 5.31e-16 | 78.2 |
MS.gene84141.t1 | AT5G52830 | 48.837 | 86 | 36 | 2 | 106 | 191 | 144 | 221 | 5.44e-16 | 78.2 |
MS.gene84141.t1 | AT1G66600 | 29.557 | 203 | 104 | 5 | 8 | 205 | 10 | 178 | 7.06e-16 | 76.6 |
MS.gene84141.t1 | AT1G66550 | 28.649 | 185 | 100 | 3 | 8 | 192 | 10 | 162 | 8.47e-16 | 76.3 |
MS.gene84141.t1 | AT1G29280 | 56.667 | 60 | 24 | 1 | 131 | 190 | 72 | 129 | 1.06e-15 | 76.3 |
MS.gene84141.t1 | AT5G41570 | 47.297 | 74 | 34 | 2 | 132 | 203 | 97 | 167 | 1.29e-15 | 74.3 |
MS.gene84141.t1 | AT5G49520 | 53.333 | 60 | 25 | 1 | 132 | 191 | 220 | 276 | 1.64e-15 | 77.4 |
MS.gene84141.t1 | AT4G24240 | 40.187 | 107 | 60 | 3 | 84 | 190 | 234 | 336 | 1.79e-15 | 77.0 |
MS.gene84141.t1 | AT4G01250 | 33.577 | 137 | 70 | 4 | 126 | 261 | 121 | 237 | 2.10e-15 | 76.3 |
MS.gene84141.t1 | AT2G46130 | 45.946 | 74 | 35 | 2 | 132 | 203 | 29 | 99 | 3.71e-15 | 71.2 |
MS.gene84141.t1 | AT4G31550 | 56.140 | 57 | 23 | 1 | 134 | 190 | 246 | 300 | 4.56e-15 | 75.5 |
MS.gene84141.t1 | AT4G31550 | 56.140 | 57 | 23 | 1 | 134 | 190 | 247 | 301 | 4.64e-15 | 75.5 |
MS.gene84141.t1 | AT2G03340 | 33.548 | 155 | 85 | 7 | 45 | 190 | 158 | 303 | 5.74e-15 | 76.3 |
MS.gene84141.t1 | AT2G03340 | 38.202 | 89 | 52 | 1 | 132 | 220 | 414 | 499 | 6.59e-12 | 66.6 |
MS.gene84141.t1 | AT5G07100 | 41.414 | 99 | 49 | 3 | 111 | 203 | 113 | 208 | 6.65e-15 | 73.2 |
MS.gene84141.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.45e-11 | 63.5 |
MS.gene84141.t1 | AT5G07100 | 41.414 | 99 | 49 | 3 | 111 | 203 | 113 | 208 | 6.65e-15 | 73.2 |
MS.gene84141.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.45e-11 | 63.5 |
MS.gene84141.t1 | AT5G07100 | 41.414 | 99 | 49 | 3 | 111 | 203 | 113 | 208 | 6.65e-15 | 73.2 |
MS.gene84141.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.45e-11 | 63.5 |
MS.gene84141.t1 | AT5G07100 | 41.414 | 99 | 49 | 3 | 111 | 203 | 113 | 208 | 6.65e-15 | 73.2 |
MS.gene84141.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.45e-11 | 63.5 |
MS.gene84141.t1 | AT5G07100 | 41.414 | 99 | 49 | 3 | 111 | 203 | 206 | 301 | 7.74e-15 | 74.7 |
MS.gene84141.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 117 | 171 | 1.25e-11 | 65.1 |
MS.gene84141.t1 | AT2G30590 | 43.617 | 94 | 42 | 5 | 100 | 190 | 283 | 368 | 1.83e-14 | 73.9 |
MS.gene84141.t1 | AT4G26440 | 53.846 | 65 | 26 | 2 | 126 | 190 | 171 | 231 | 1.96e-14 | 74.7 |
MS.gene84141.t1 | AT4G26440 | 47.619 | 63 | 30 | 1 | 132 | 194 | 371 | 430 | 1.62e-11 | 65.9 |
MS.gene84141.t1 | AT4G23550 | 50.000 | 70 | 33 | 1 | 121 | 190 | 128 | 195 | 2.18e-14 | 73.2 |
MS.gene84141.t1 | AT5G28650 | 40.179 | 112 | 54 | 3 | 79 | 190 | 219 | 317 | 2.36e-14 | 73.6 |
MS.gene84141.t1 | AT2G24570 | 56.140 | 57 | 23 | 1 | 134 | 190 | 244 | 298 | 2.66e-14 | 73.2 |
MS.gene84141.t1 | AT2G44745 | 52.542 | 59 | 25 | 1 | 132 | 190 | 144 | 199 | 2.78e-14 | 71.6 |
MS.gene84141.t1 | AT4G04450 | 45.745 | 94 | 46 | 3 | 100 | 190 | 162 | 253 | 8.52e-14 | 72.4 |
MS.gene84141.t1 | AT5G22570 | 46.154 | 65 | 35 | 0 | 134 | 198 | 111 | 175 | 9.46e-14 | 71.2 |
MS.gene84141.t1 | AT4G18170 | 46.377 | 69 | 34 | 1 | 132 | 200 | 171 | 236 | 9.88e-14 | 71.2 |
MS.gene84141.t1 | AT3G04670 | 54.386 | 57 | 24 | 1 | 134 | 190 | 263 | 317 | 1.17e-13 | 71.2 |
MS.gene84141.t1 | AT3G58710 | 55.000 | 60 | 25 | 1 | 131 | 190 | 69 | 126 | 1.26e-13 | 70.5 |
MS.gene84141.t1 | AT3G58710 | 55.000 | 60 | 25 | 1 | 131 | 190 | 68 | 125 | 1.29e-13 | 70.5 |
MS.gene84141.t1 | AT2G34830 | 56.140 | 57 | 23 | 1 | 134 | 190 | 216 | 270 | 1.31e-13 | 71.6 |
MS.gene84141.t1 | AT2G34830 | 56.140 | 57 | 23 | 1 | 134 | 190 | 225 | 279 | 1.41e-13 | 71.6 |
MS.gene84141.t1 | AT5G26170 | 49.153 | 59 | 27 | 1 | 132 | 190 | 112 | 167 | 1.88e-13 | 68.2 |
MS.gene84141.t1 | AT1G13960 | 42.169 | 83 | 43 | 3 | 108 | 190 | 205 | 282 | 2.06e-13 | 71.2 |
MS.gene84141.t1 | AT1G13960 | 49.153 | 59 | 27 | 1 | 132 | 190 | 408 | 463 | 2.21e-12 | 68.2 |
MS.gene84141.t1 | AT4G04450 | 45.745 | 94 | 46 | 3 | 100 | 190 | 256 | 347 | 2.06e-13 | 71.2 |
MS.gene84141.t1 | AT2G37260 | 46.377 | 69 | 34 | 1 | 122 | 190 | 338 | 403 | 2.30e-13 | 70.9 |
MS.gene84141.t1 | AT2G37260 | 46.377 | 69 | 34 | 1 | 122 | 190 | 258 | 323 | 2.31e-13 | 70.5 |
MS.gene84141.t1 | AT2G37260 | 46.377 | 69 | 34 | 1 | 122 | 190 | 256 | 321 | 2.32e-13 | 70.5 |
MS.gene84141.t1 | AT1G13960 | 42.169 | 83 | 43 | 3 | 108 | 190 | 52 | 129 | 3.20e-13 | 70.1 |
MS.gene84141.t1 | AT1G13960 | 49.153 | 59 | 27 | 1 | 132 | 190 | 255 | 310 | 2.44e-12 | 67.8 |
MS.gene84141.t1 | AT3G01080 | 53.333 | 60 | 24 | 2 | 131 | 190 | 203 | 258 | 3.49e-13 | 69.7 |
MS.gene84141.t1 | AT1G29860 | 46.377 | 69 | 34 | 1 | 132 | 200 | 135 | 200 | 4.46e-13 | 68.9 |
MS.gene84141.t1 | AT3G01080 | 53.333 | 60 | 24 | 2 | 131 | 190 | 203 | 258 | 6.66e-13 | 69.7 |
MS.gene84141.t1 | AT3G01080 | 39.560 | 91 | 47 | 2 | 105 | 190 | 311 | 398 | 5.44e-12 | 67.0 |
MS.gene84141.t1 | AT3G01080 | 53.333 | 60 | 24 | 2 | 131 | 190 | 165 | 220 | 7.50e-13 | 69.3 |
MS.gene84141.t1 | AT3G01080 | 39.560 | 91 | 47 | 2 | 105 | 190 | 273 | 360 | 6.00e-12 | 66.6 |
MS.gene84141.t1 | AT1G80590 | 28.646 | 192 | 87 | 5 | 8 | 199 | 10 | 151 | 7.64e-13 | 67.8 |
MS.gene84141.t1 | AT4G01720 | 54.237 | 59 | 25 | 1 | 132 | 190 | 238 | 294 | 1.00e-12 | 69.3 |
MS.gene84141.t1 | AT1G30650 | 56.140 | 57 | 23 | 1 | 134 | 190 | 218 | 272 | 1.01e-12 | 68.9 |
MS.gene84141.t1 | AT1G69310 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 1.11e-12 | 68.2 |
MS.gene84141.t1 | AT1G69310 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 1.11e-12 | 68.2 |
MS.gene84141.t1 | AT1G69310 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 1.11e-12 | 68.2 |
MS.gene84141.t1 | AT1G66560 | 45.000 | 60 | 33 | 0 | 133 | 192 | 103 | 162 | 1.13e-12 | 67.4 |
MS.gene84141.t1 | AT5G46350 | 45.455 | 66 | 33 | 1 | 132 | 197 | 182 | 244 | 1.99e-12 | 67.8 |
MS.gene84141.t1 | AT2G25000 | 50.000 | 62 | 29 | 1 | 132 | 193 | 102 | 161 | 2.56e-12 | 66.2 |
MS.gene84141.t1 | AT2G25000 | 50.000 | 62 | 29 | 1 | 132 | 193 | 102 | 161 | 2.56e-12 | 66.2 |
MS.gene84141.t1 | AT5G56270 | 49.231 | 65 | 29 | 2 | 126 | 190 | 266 | 326 | 2.77e-12 | 68.2 |
MS.gene84141.t1 | AT1G62300 | 47.297 | 74 | 36 | 2 | 118 | 190 | 296 | 367 | 3.33e-12 | 67.8 |
MS.gene84141.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 340 | 395 | 3.49e-12 | 67.8 |
MS.gene84141.t1 | AT4G26640 | 50.000 | 58 | 25 | 2 | 133 | 190 | 171 | 224 | 9.09e-11 | 63.2 |
MS.gene84141.t1 | AT2G25000 | 50.000 | 62 | 29 | 1 | 132 | 193 | 124 | 183 | 3.50e-12 | 65.9 |
MS.gene84141.t1 | AT2G25000 | 50.000 | 62 | 29 | 1 | 132 | 193 | 145 | 204 | 3.75e-12 | 66.2 |
MS.gene84141.t1 | AT2G04880 | 49.153 | 59 | 27 | 1 | 132 | 190 | 282 | 337 | 3.80e-12 | 67.4 |
MS.gene84141.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 380 | 435 | 4.16e-12 | 67.4 |
MS.gene84141.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 308 | 363 | 4.40e-12 | 67.4 |
MS.gene84141.t1 | AT2G04880 | 49.153 | 59 | 27 | 1 | 132 | 190 | 306 | 361 | 4.41e-12 | 67.4 |
MS.gene84141.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 204 | 259 | 5.32e-12 | 66.6 |
MS.gene84141.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 204 | 259 | 5.32e-12 | 66.6 |
MS.gene84141.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 204 | 259 | 5.32e-12 | 66.6 |
MS.gene84141.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 204 | 259 | 5.32e-12 | 66.6 |
MS.gene84141.t1 | AT5G13080 | 50.000 | 60 | 27 | 1 | 132 | 191 | 66 | 122 | 6.61e-12 | 63.2 |
MS.gene84141.t1 | AT4G39410 | 49.153 | 59 | 27 | 1 | 132 | 190 | 222 | 277 | 6.64e-12 | 65.9 |
MS.gene84141.t1 | AT3G01970 | 50.000 | 60 | 27 | 1 | 132 | 191 | 64 | 120 | 7.24e-12 | 63.2 |
MS.gene84141.t1 | AT4G22070 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 1.15e-11 | 66.2 |
MS.gene84141.t1 | AT4G22070 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 1.15e-11 | 66.2 |
MS.gene84141.t1 | AT4G22070 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 1.15e-11 | 66.2 |
MS.gene84141.t1 | AT4G22070 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 1.15e-11 | 66.2 |
MS.gene84141.t1 | AT2G47260 | 48.333 | 60 | 28 | 1 | 132 | 191 | 173 | 229 | 1.19e-11 | 65.5 |
MS.gene84141.t1 | AT3G62340 | 50.000 | 60 | 27 | 1 | 132 | 191 | 117 | 173 | 1.76e-11 | 64.3 |
MS.gene84141.t1 | AT5G43290 | 49.180 | 61 | 28 | 1 | 130 | 190 | 111 | 168 | 2.20e-11 | 63.9 |
MS.gene84141.t1 | AT2G38470 | 47.458 | 59 | 28 | 1 | 132 | 190 | 361 | 416 | 2.80e-11 | 65.1 |
MS.gene84141.t1 | AT1G68150 | 44.304 | 79 | 39 | 3 | 132 | 207 | 234 | 310 | 3.98e-11 | 63.9 |
MS.gene84141.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 5.99e-11 | 64.3 |
MS.gene84141.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.04e-11 | 64.3 |
MS.gene84141.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.16e-11 | 64.3 |
MS.gene84141.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.16e-11 | 64.3 |
MS.gene84141.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.29e-11 | 64.3 |
MS.gene84141.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.29e-11 | 64.3 |
MS.gene84141.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.69e-11 | 64.3 |
MS.gene84141.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.79e-11 | 64.3 |
MS.gene84141.t1 | AT5G64810 | 40.299 | 67 | 37 | 1 | 132 | 198 | 109 | 172 | 6.83e-11 | 61.2 |
MS.gene84141.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 6.98e-11 | 64.3 |
MS.gene84141.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 371 | 454 | 7.67e-11 | 63.9 |
MS.gene84141.t1 | AT2G40740 | 57.500 | 40 | 17 | 0 | 153 | 192 | 149 | 188 | 9.30e-11 | 62.0 |
MS.gene84141.t1 | AT4G12020 | 37.079 | 89 | 51 | 3 | 102 | 190 | 438 | 521 | 9.81e-11 | 63.5 |
MS.gene84141.t1 | AT5G45050 | 50.877 | 57 | 26 | 1 | 134 | 190 | 1153 | 1207 | 9.93e-11 | 63.5 |
Find 75 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAATCTCACTTGCCATATT+TGG | 0.088426 | 3.1:+72807640 | None:intergenic |
CAAATTTACATACCTCTTTC+TGG | 0.143241 | 3.1:+72808582 | None:intergenic |
CTGTAAAAGACATGTTAATA+TGG | 0.191166 | 3.1:-72808737 | MS.gene84141:CDS |
TTTGATCAATTTGAATTTGA+TGG | 0.254177 | 3.1:-72807565 | MS.gene84141:CDS |
TGTTAACAATATTTGTTTCT+TGG | 0.254224 | 3.1:+72807899 | None:intergenic |
TATGTTTCCCCTGCAAATTC+AGG | 0.272093 | 3.1:-72807703 | MS.gene84141:CDS |
ATGGAACAAATGATTGGTTT+AGG | 0.306745 | 3.1:+72807779 | None:intergenic |
AAACACACCAACTGCTTCTA+TGG | 0.316690 | 3.1:-72807596 | MS.gene84141:CDS |
AATCTCACGTGTTTCATTAG+AGG | 0.318717 | 3.1:+72808810 | None:intergenic |
GTTAACAATATTTGTTTCTT+GGG | 0.321184 | 3.1:+72807900 | None:intergenic |
ATGATTGGTTTAGGAAATCT+AGG | 0.323422 | 3.1:+72807788 | None:intergenic |
GGACCTTCCACTGCCATTCC+TGG | 0.341337 | 3.1:+72808255 | None:intergenic |
TGACTTATTCCTGAATTTGC+AGG | 0.343271 | 3.1:+72807694 | None:intergenic |
GGAACACTCTAGCAATTAGA+TGG | 0.350756 | 3.1:-72808299 | MS.gene84141:CDS |
TAATCTCACTTGCCATATTT+GGG | 0.350967 | 3.1:+72807641 | None:intergenic |
GGGTATAGTTGGCGAAAATA+TGG | 0.351304 | 3.1:-72808222 | MS.gene84141:CDS |
TTTGTTTCTTGGGTTTGAAA+TGG | 0.354628 | 3.1:+72807910 | None:intergenic |
TTTCAAATGGAACAAATGAT+TGG | 0.363750 | 3.1:+72807773 | None:intergenic |
ATTTGAAAAGGCACTTGAAA+TGG | 0.370230 | 3.1:-72808764 | MS.gene84141:CDS |
TCAAATTCAAATTGATCAAA+TGG | 0.396441 | 3.1:+72807568 | None:intergenic |
TAGAAACGTTCTAGGATGTT+TGG | 0.398748 | 3.1:-72808046 | MS.gene84141:CDS |
TTCAAAAGTTGTTCATTTGG+TGG | 0.409814 | 3.1:+72807847 | None:intergenic |
CAAAGCTACTTTCAAGTACA+TGG | 0.413007 | 3.1:+72807749 | None:intergenic |
TTGTTCAAAAGTTGTTCATT+TGG | 0.416222 | 3.1:+72807844 | None:intergenic |
TGCAGTCATAGAAACGTTCT+AGG | 0.419203 | 3.1:-72808054 | MS.gene84141:CDS |
AGTTGTGGAATGTGAAGTTT+TGG | 0.442534 | 3.1:+72807542 | None:intergenic |
CTGAGGCTGAAGGGTATTGT+TGG | 0.449383 | 3.1:+72808701 | None:intergenic |
TATGTGATTTCAAAGATAGT+TGG | 0.452782 | 3.1:+72807991 | None:intergenic |
TGAAATGGATTAGTTAATGT+TGG | 0.458156 | 3.1:+72807925 | None:intergenic |
AAGGTGGCGAATCTGATATT+CGG | 0.465518 | 3.1:+72808665 | None:intergenic |
TTTGTTGATCAAGGCTTTGA+GGG | 0.467796 | 3.1:+72807872 | None:intergenic |
TTTGGGAAAACACTTGGAGT+TGG | 0.470835 | 3.1:+72807658 | None:intergenic |
AATTATATCCACATTTGAAA+AGG | 0.478087 | 3.1:-72808776 | MS.gene84141:CDS |
AGATAAGCTACTACAAGGAT+TGG | 0.478321 | 3.1:-72808875 | MS.gene84141:CDS |
TGTAAAAGACATGTTAATAT+GGG | 0.479565 | 3.1:-72808736 | MS.gene84141:CDS |
GTGGAAGGTCCTCTTGATGA+TGG | 0.481430 | 3.1:-72808243 | MS.gene84141:CDS |
TTCTGGAAGCATTGTGATCA+CGG | 0.489343 | 3.1:+72808599 | None:intergenic |
ATGTGATTTCAAAGATAGTT+GGG | 0.493028 | 3.1:+72807992 | None:intergenic |
CAACAATACCCTTCAGCCTC+AGG | 0.495514 | 3.1:-72808700 | MS.gene84141:CDS |
GCCATATTTGGGAAAACACT+TGG | 0.500966 | 3.1:+72807652 | None:intergenic |
ATCACAATGCTTCCAGAAAG+AGG | 0.506811 | 3.1:-72808594 | MS.gene84141:intron |
GACTTATTCCTGAATTTGCA+GGG | 0.514420 | 3.1:+72807695 | None:intergenic |
ACCTTGGATGCACGGCTCCA+AGG | 0.515275 | 3.1:+72808187 | None:intergenic |
CTCTTGATGATGGGTATAGT+TGG | 0.516255 | 3.1:-72808233 | MS.gene84141:CDS |
TCCTTGGAGCCGTGCATCCA+AGG | 0.519224 | 3.1:-72808188 | MS.gene84141:intron |
CTGTCGGAGTCTTCACTTCG+CGG | 0.524147 | 3.1:+72808631 | None:intergenic |
TTGTGCATGTGTGGTTTCCT+CGG | 0.524687 | 3.1:+72807968 | None:intergenic |
TATGGTCAGAAAGACATCCT+TGG | 0.530226 | 3.1:-72808204 | MS.gene84141:CDS |
GCAAGTGTTCCTGAGGCTGA+AGG | 0.534387 | 3.1:+72808691 | None:intergenic |
GTGTTTGCAGCAGAAGTAGC+TGG | 0.543085 | 3.1:+72807613 | None:intergenic |
CAAGTGTTCCTGAGGCTGAA+GGG | 0.573717 | 3.1:+72808692 | None:intergenic |
GCTACTACAAGGATTGGAGT+TGG | 0.576309 | 3.1:-72808869 | MS.gene84141:CDS |
AATTATATACCTTGGATGCA+CGG | 0.579367 | 3.1:+72808179 | None:intergenic |
TGGAAGGTCCTCTTGATGAT+GGG | 0.583275 | 3.1:-72808242 | MS.gene84141:CDS |
TATTCGAGTTGAACCAGGAA+TGG | 0.589228 | 3.1:-72808268 | MS.gene84141:CDS |
AGTTGAACCAGGAATGGCAG+TGG | 0.591297 | 3.1:-72808262 | MS.gene84141:CDS |
TTTGCAGGGGAAACATATGA+AGG | 0.596062 | 3.1:+72807709 | None:intergenic |
ATCACGGTTAAAATCTCTGT+CGG | 0.596477 | 3.1:+72808615 | None:intergenic |
GAACCAGGAATGGCAGTGGA+AGG | 0.596663 | 3.1:-72808258 | MS.gene84141:CDS |
TTAATAGATAAGCTACTACA+AGG | 0.612960 | 3.1:-72808880 | MS.gene84141:CDS |
AAACATATTCGAGTTGAACC+AGG | 0.613692 | 3.1:-72808273 | MS.gene84141:CDS |
GAACTCTTAGACCTGTTCGT+AGG | 0.617613 | 3.1:+72807821 | None:intergenic |
CTTCGCGGACTACAGCTCAA+AGG | 0.617709 | 3.1:+72808646 | None:intergenic |
TAATGTTGGACCAACCACAT+TGG | 0.618042 | 3.1:+72807939 | None:intergenic |
GGAAACTCCATAGAAGCAGT+TGG | 0.622336 | 3.1:+72807589 | None:intergenic |
TGGAAGCAATTGTGCATGTG+TGG | 0.623042 | 3.1:+72807959 | None:intergenic |
CAACTATACCCATCATCAAG+AGG | 0.624580 | 3.1:+72808234 | None:intergenic |
ACAATTGCTTCCAATGTGGT+TGG | 0.627124 | 3.1:-72807949 | MS.gene84141:CDS |
TGGCGAATCTGATATTCGGA+TGG | 0.634201 | 3.1:+72808669 | None:intergenic |
ATCTTTGAAATCACATACCG+AGG | 0.643767 | 3.1:-72807985 | MS.gene84141:CDS |
CGCGGACTACAGCTCAAAGG+TGG | 0.645554 | 3.1:+72808649 | None:intergenic |
TCGGATGGCAAGTGTTCCTG+AGG | 0.646934 | 3.1:+72808684 | None:intergenic |
ACTTATTCCTGAATTTGCAG+GGG | 0.668793 | 3.1:+72807696 | None:intergenic |
ATGCACAATTGCTTCCAATG+TGG | 0.717502 | 3.1:-72807953 | MS.gene84141:CDS |
TTTGCAGCAGAAGTAGCTGG+TGG | 0.728180 | 3.1:+72807616 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATATTTATTTATTTT+AGG | - | chr3.1:72808103-72808122 | MS.gene84141:intron | 0.0% |
!! | AATTATATCCACATTTGAAA+AGG | - | chr3.1:72807647-72807666 | MS.gene84141:CDS | 20.0% |
!! | AATTGAGAAATTATATACCT+TGG | + | chr3.1:72808255-72808274 | None:intergenic | 20.0% |
!! | TAAATATAAAAACTAGGGTA+AGG | + | chr3.1:72808095-72808114 | None:intergenic | 20.0% |
!! | TCAAATTCAAATTGATCAAA+TGG | + | chr3.1:72808858-72808877 | None:intergenic | 20.0% |
!! | TGTAAAAGACATGTTAATAT+GGG | - | chr3.1:72807687-72807706 | MS.gene84141:CDS | 20.0% |
!! | TTGTATTATTAAGAATAACC+CGG | + | chr3.1:72808026-72808045 | None:intergenic | 20.0% |
!! | TTTGATCAATTTGAATTTGA+TGG | - | chr3.1:72808858-72808877 | MS.gene84141:CDS | 20.0% |
!!! | AGTTTTTTTTTTAATACCGT+AGG | - | chr3.1:72807928-72807947 | MS.gene84141:CDS | 20.0% |
!!! | GTTAACAATATTTGTTTCTT+GGG | + | chr3.1:72808526-72808545 | None:intergenic | 20.0% |
!!! | GTTTTTTTTTTAATACCGTA+GGG | - | chr3.1:72807929-72807948 | MS.gene84141:CDS | 20.0% |
!!! | TGTTAACAATATTTGTTTCT+TGG | + | chr3.1:72808527-72808546 | None:intergenic | 20.0% |
! | ATGTGATTTCAAAGATAGTT+GGG | + | chr3.1:72808434-72808453 | None:intergenic | 25.0% |
! | CTGTAAAAGACATGTTAATA+TGG | - | chr3.1:72807686-72807705 | MS.gene84141:CDS | 25.0% |
! | TATGTGATTTCAAAGATAGT+TGG | + | chr3.1:72808435-72808454 | None:intergenic | 25.0% |
! | TGTATTATTAAGAATAACCC+GGG | + | chr3.1:72808025-72808044 | None:intergenic | 25.0% |
! | TTAATAGATAAGCTACTACA+AGG | - | chr3.1:72807543-72807562 | MS.gene84141:CDS | 25.0% |
! | TTGAAGTTGAAGTAACTATA+TGG | - | chr3.1:72808299-72808318 | MS.gene84141:CDS | 25.0% |
! | TTGTTCAAAAGTTGTTCATT+TGG | + | chr3.1:72808582-72808601 | None:intergenic | 25.0% |
! | TTTCAAATGGAACAAATGAT+TGG | + | chr3.1:72808653-72808672 | None:intergenic | 25.0% |
!! | CAAATGTGGATATAATTTTC+TGG | + | chr3.1:72807644-72807663 | None:intergenic | 25.0% |
!!! | TAAACTTTTTTTATACGACC+CGG | - | chr3.1:72808004-72808023 | MS.gene84141:CDS | 25.0% |
!!! | TGAAATGGATTAGTTAATGT+TGG | + | chr3.1:72808501-72808520 | None:intergenic | 25.0% |
AATTATATACCTTGGATGCA+CGG | + | chr3.1:72808247-72808266 | None:intergenic | 30.0% | |
ATAATCTCACTTGCCATATT+TGG | + | chr3.1:72808786-72808805 | None:intergenic | 30.0% | |
CAAATTTACATACCTCTTTC+TGG | + | chr3.1:72807844-72807863 | None:intergenic | 30.0% | |
TAATCTCACTTGCCATATTT+GGG | + | chr3.1:72808785-72808804 | None:intergenic | 30.0% | |
TTCAAAAGTTGTTCATTTGG+TGG | + | chr3.1:72808579-72808598 | None:intergenic | 30.0% | |
! | TCAAGTACATGGTTTTCAAA+TGG | + | chr3.1:72808666-72808685 | None:intergenic | 30.0% |
! | TTTGTTTCTTGGGTTTGAAA+TGG | + | chr3.1:72808516-72808535 | None:intergenic | 30.0% |
!! | ATGATTGGTTTAGGAAATCT+AGG | + | chr3.1:72808638-72808657 | None:intergenic | 30.0% |
!! | ATGGAACAAATGATTGGTTT+AGG | + | chr3.1:72808647-72808666 | None:intergenic | 30.0% |
!! | ATTTGAAAAGGCACTTGAAA+TGG | - | chr3.1:72807659-72807678 | MS.gene84141:CDS | 30.0% |
!!! | AAACTTTTTTTATACGACCC+GGG | - | chr3.1:72808005-72808024 | MS.gene84141:CDS | 30.0% |
AAGAGAAAAATCGTGAGTTG+TGG | + | chr3.1:72808899-72808918 | None:intergenic | 35.0% | |
AATCTCACGTGTTTCATTAG+AGG | + | chr3.1:72807616-72807635 | None:intergenic | 35.0% | |
ACTTATTCCTGAATTTGCAG+GGG | + | chr3.1:72808730-72808749 | None:intergenic | 35.0% | |
AGATAAGCTACTACAAGGAT+TGG | - | chr3.1:72807548-72807567 | MS.gene84141:CDS | 35.0% | |
ATCACGGTTAAAATCTCTGT+CGG | + | chr3.1:72807811-72807830 | None:intergenic | 35.0% | |
GACTTATTCCTGAATTTGCA+GGG | + | chr3.1:72808731-72808750 | None:intergenic | 35.0% | |
TGACTTATTCCTGAATTTGC+AGG | + | chr3.1:72808732-72808751 | None:intergenic | 35.0% | |
! | AGTTGTGGAATGTGAAGTTT+TGG | + | chr3.1:72808884-72808903 | None:intergenic | 35.0% |
! | CAAAGCTACTTTCAAGTACA+TGG | + | chr3.1:72808677-72808696 | None:intergenic | 35.0% |
! | TCCAAGTGTTTTCCCAAATA+TGG | - | chr3.1:72808770-72808789 | MS.gene84141:CDS | 35.0% |
! | TTCAAGTGCCTTTTCAAATG+TGG | + | chr3.1:72807658-72807677 | None:intergenic | 35.0% |
! | TTTGTTGATCAAGGCTTTGA+GGG | + | chr3.1:72808554-72808573 | None:intergenic | 35.0% |
! | TTTTGTTGATCAAGGCTTTG+AGG | + | chr3.1:72808555-72808574 | None:intergenic | 35.0% |
!! | AAACATATTCGAGTTGAACC+AGG | - | chr3.1:72808150-72808169 | MS.gene84141:intron | 35.0% |
!! | ATCTTTGAAATCACATACCG+AGG | - | chr3.1:72808438-72808457 | MS.gene84141:intron | 35.0% |
!! | TAGAAACGTTCTAGGATGTT+TGG | - | chr3.1:72808377-72808396 | MS.gene84141:intron | 35.0% |
!! | TTGGTGGTTTTTGTTGATCA+AGG | + | chr3.1:72808563-72808582 | None:intergenic | 35.0% |
AAACACACCAACTGCTTCTA+TGG | - | chr3.1:72808827-72808846 | MS.gene84141:CDS | 40.0% | |
AAGGTGGCGAATCTGATATT+CGG | + | chr3.1:72807761-72807780 | None:intergenic | 40.0% | |
AATATGGCGAGTGATCTGAA+TGG | - | chr3.1:72807963-72807982 | MS.gene84141:CDS | 40.0% | |
ACAATTGCTTCCAATGTGGT+TGG | - | chr3.1:72808474-72808493 | MS.gene84141:intron | 40.0% | |
ATATGGCGAGTGATCTGAAT+GGG | - | chr3.1:72807964-72807983 | MS.gene84141:CDS | 40.0% | |
ATCACAATGCTTCCAGAAAG+AGG | - | chr3.1:72807829-72807848 | MS.gene84141:CDS | 40.0% | |
ATGCACAATTGCTTCCAATG+TGG | - | chr3.1:72808470-72808489 | MS.gene84141:intron | 40.0% | |
CAACTATACCCATCATCAAG+AGG | + | chr3.1:72808192-72808211 | None:intergenic | 40.0% | |
GCCATATTTGGGAAAACACT+TGG | + | chr3.1:72808774-72808793 | None:intergenic | 40.0% | |
GGAACACTCTAGCAATTAGA+TGG | - | chr3.1:72808124-72808143 | MS.gene84141:intron | 40.0% | |
GGGTATAGTTGGCGAAAATA+TGG | - | chr3.1:72808201-72808220 | MS.gene84141:CDS | 40.0% | |
TAATGTTGGACCAACCACAT+TGG | + | chr3.1:72808487-72808506 | None:intergenic | 40.0% | |
TAGGGTGCGCATAGATAATA+TGG | - | chr3.1:72807947-72807966 | MS.gene84141:CDS | 40.0% | |
TATGGTCAGAAAGACATCCT+TGG | - | chr3.1:72808219-72808238 | MS.gene84141:CDS | 40.0% | |
TATGTTTCCCCTGCAAATTC+AGG | - | chr3.1:72808720-72808739 | MS.gene84141:CDS | 40.0% | |
TATTATCTATGCGCACCCTA+CGG | + | chr3.1:72807947-72807966 | None:intergenic | 40.0% | |
TGCAGTCATAGAAACGTTCT+AGG | - | chr3.1:72808369-72808388 | MS.gene84141:intron | 40.0% | |
TTGTCGAGAAAACTCTCGTT+AGG | - | chr3.1:72807897-72807916 | MS.gene84141:CDS | 40.0% | |
TTTGCAGGGGAAACATATGA+AGG | + | chr3.1:72808717-72808736 | None:intergenic | 40.0% | |
TTTGGGAAAACACTTGGAGT+TGG | + | chr3.1:72808768-72808787 | None:intergenic | 40.0% | |
! | CTTTTGAACAACCTACGAAC+AGG | - | chr3.1:72808591-72808610 | MS.gene84141:intron | 40.0% |
!! | CTCTTGATGATGGGTATAGT+TGG | - | chr3.1:72808190-72808209 | MS.gene84141:CDS | 40.0% |
!! | TATTCGAGTTGAACCAGGAA+TGG | - | chr3.1:72808155-72808174 | MS.gene84141:intron | 40.0% |
!! | TTCTGGAAGCATTGTGATCA+CGG | + | chr3.1:72807827-72807846 | None:intergenic | 40.0% |
GAACTCTTAGACCTGTTCGT+AGG | + | chr3.1:72808605-72808624 | None:intergenic | 45.0% | |
GCTACTACAAGGATTGGAGT+TGG | - | chr3.1:72807554-72807573 | MS.gene84141:CDS | 45.0% | |
GGAAACTCCATAGAAGCAGT+TGG | + | chr3.1:72808837-72808856 | None:intergenic | 45.0% | |
GTGTATGTGTGTGTATGCAG+AGG | - | chr3.1:72808336-72808355 | MS.gene84141:intron | 45.0% | |
TGGAAGCAATTGTGCATGTG+TGG | + | chr3.1:72808467-72808486 | None:intergenic | 45.0% | |
TGGCGAATCTGATATTCGGA+TGG | + | chr3.1:72807757-72807776 | None:intergenic | 45.0% | |
TTGTGCATGTGTGGTTTCCT+CGG | + | chr3.1:72808458-72808477 | None:intergenic | 45.0% | |
! | TGGAAGGTCCTCTTGATGAT+GGG | - | chr3.1:72808181-72808200 | MS.gene84141:intron | 45.0% |
!! | AATAAATAAATATAAAAACT+AGG | + | chr3.1:72808101-72808120 | None:intergenic | 5.0% |
!! | ATAAATAAATATAAAAACTA+GGG | + | chr3.1:72808100-72808119 | None:intergenic | 5.0% |
AGTTGAACCAGGAATGGCAG+TGG | - | chr3.1:72808161-72808180 | MS.gene84141:intron | 50.0% | |
CAACAATACCCTTCAGCCTC+AGG | - | chr3.1:72807723-72807742 | MS.gene84141:CDS | 50.0% | |
CAAGTGTTCCTGAGGCTGAA+GGG | + | chr3.1:72807734-72807753 | None:intergenic | 50.0% | |
GTGGAAGGTCCTCTTGATGA+TGG | - | chr3.1:72808180-72808199 | MS.gene84141:intron | 50.0% | |
GTGTTTGCAGCAGAAGTAGC+TGG | + | chr3.1:72808813-72808832 | None:intergenic | 50.0% | |
TTTGCAGCAGAAGTAGCTGG+TGG | + | chr3.1:72808810-72808829 | None:intergenic | 50.0% | |
!! | CTGAGGCTGAAGGGTATTGT+TGG | + | chr3.1:72807725-72807744 | None:intergenic | 50.0% |
CTGTCGGAGTCTTCACTTCG+CGG | + | chr3.1:72807795-72807814 | None:intergenic | 55.0% | |
GAACCAGGAATGGCAGTGGA+AGG | - | chr3.1:72808165-72808184 | MS.gene84141:intron | 55.0% | |
GCAAGTGTTCCTGAGGCTGA+AGG | + | chr3.1:72807735-72807754 | None:intergenic | 55.0% | |
TCGGATGGCAAGTGTTCCTG+AGG | + | chr3.1:72807742-72807761 | None:intergenic | 55.0% | |
! | CTTCGCGGACTACAGCTCAA+AGG | + | chr3.1:72807780-72807799 | None:intergenic | 55.0% |
ACCTTGGATGCACGGCTCCA+AGG | + | chr3.1:72808239-72808258 | None:intergenic | 60.0% | |
GGACCTTCCACTGCCATTCC+TGG | + | chr3.1:72808171-72808190 | None:intergenic | 60.0% | |
TCCTTGGAGCCGTGCATCCA+AGG | - | chr3.1:72808235-72808254 | MS.gene84141:CDS | 60.0% | |
! | CGCGGACTACAGCTCAAAGG+TGG | + | chr3.1:72807777-72807796 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 72807525 | 72808920 | 72807525 | ID=MS.gene84141 |
chr3.1 | mRNA | 72807525 | 72808920 | 72807525 | ID=MS.gene84141.t1;Parent=MS.gene84141 |
chr3.1 | exon | 72808595 | 72808920 | 72808595 | ID=MS.gene84141.t1.exon1;Parent=MS.gene84141.t1 |
chr3.1 | CDS | 72808595 | 72808920 | 72808595 | ID=cds.MS.gene84141.t1;Parent=MS.gene84141.t1 |
chr3.1 | exon | 72808189 | 72808320 | 72808189 | ID=MS.gene84141.t1.exon2;Parent=MS.gene84141.t1 |
chr3.1 | CDS | 72808189 | 72808320 | 72808189 | ID=cds.MS.gene84141.t1;Parent=MS.gene84141.t1 |
chr3.1 | exon | 72807525 | 72808089 | 72807525 | ID=MS.gene84141.t1.exon3;Parent=MS.gene84141.t1 |
chr3.1 | CDS | 72807525 | 72808089 | 72807525 | ID=cds.MS.gene84141.t1;Parent=MS.gene84141.t1 |
Gene Sequence |
Protein sequence |