Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84530.t1 | XP_013460089.1 | 83.4 | 325 | 5 | 2 | 1 | 276 | 1 | 325 | 2.80E-150 | 541.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84530.t1 | Q7XQN1 | 42.0 | 374 | 117 | 11 | 1 | 276 | 1 | 372 | 3.7e-58 | 226.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84530.t1 | A0A072V7G7 | 83.4 | 325 | 5 | 2 | 1 | 276 | 1 | 325 | 2.0e-150 | 541.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene84530.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84530.t1 | MTR_3g461490 | 83.385 | 325 | 5 | 2 | 1 | 276 | 1 | 325 | 0.0 | 546 |
| MS.gene84530.t1 | MTR_6g009430 | 37.714 | 175 | 56 | 2 | 1 | 127 | 1 | 170 | 3.42e-30 | 116 |
| MS.gene84530.t1 | MTR_3g461510 | 61.538 | 91 | 35 | 0 | 167 | 257 | 1 | 91 | 9.72e-30 | 108 |
| MS.gene84530.t1 | MTR_4g091490 | 42.636 | 129 | 25 | 2 | 1 | 80 | 1 | 129 | 9.00e-26 | 104 |
| MS.gene84530.t1 | MTR_3g074520 | 32.787 | 183 | 63 | 2 | 1 | 123 | 1 | 183 | 1.32e-24 | 101 |
| MS.gene84530.t1 | MTR_2g011660 | 41.085 | 129 | 27 | 2 | 1 | 80 | 1 | 129 | 3.28e-24 | 100 |
| MS.gene84530.t1 | MTR_7g011170 | 40.625 | 128 | 28 | 1 | 1 | 80 | 1 | 128 | 3.54e-23 | 96.7 |
| MS.gene84530.t1 | MTR_5g078140 | 37.415 | 147 | 44 | 1 | 1 | 99 | 1 | 147 | 1.86e-22 | 95.1 |
| MS.gene84530.t1 | MTR_5g029840 | 33.333 | 192 | 72 | 6 | 1 | 138 | 1 | 190 | 2.56e-22 | 94.7 |
| MS.gene84530.t1 | MTR_6g012690 | 39.062 | 128 | 30 | 1 | 1 | 80 | 1 | 128 | 2.85e-22 | 95.1 |
| MS.gene84530.t1 | MTR_3g045430 | 40.441 | 136 | 32 | 2 | 1 | 87 | 1 | 136 | 7.57e-22 | 92.8 |
| MS.gene84530.t1 | MTR_2g089620 | 38.806 | 134 | 33 | 2 | 1 | 85 | 1 | 134 | 7.80e-22 | 93.2 |
| MS.gene84530.t1 | MTR_4g073420 | 34.459 | 148 | 45 | 2 | 1 | 100 | 1 | 144 | 9.78e-22 | 92.4 |
| MS.gene84530.t1 | MTR_4g478180 | 36.806 | 144 | 40 | 2 | 1 | 93 | 2 | 145 | 1.01e-21 | 93.6 |
| MS.gene84530.t1 | MTR_3g065440 | 38.129 | 139 | 38 | 1 | 1 | 91 | 1 | 139 | 1.19e-21 | 92.4 |
| MS.gene84530.t1 | MTR_4g102380 | 38.462 | 130 | 32 | 1 | 1 | 82 | 1 | 130 | 1.92e-21 | 91.3 |
| MS.gene84530.t1 | MTR_4g082290 | 39.844 | 128 | 29 | 1 | 1 | 80 | 1 | 128 | 2.08e-21 | 93.2 |
| MS.gene84530.t1 | MTR_3g097450 | 34.228 | 149 | 48 | 2 | 1 | 101 | 1 | 147 | 2.68e-21 | 91.3 |
| MS.gene84530.t1 | MTR_4g082230 | 39.062 | 128 | 30 | 1 | 1 | 80 | 1 | 128 | 3.75e-21 | 92.4 |
| MS.gene84530.t1 | MTR_1g017140 | 42.017 | 119 | 20 | 2 | 1 | 70 | 1 | 119 | 7.63e-20 | 88.2 |
| MS.gene84530.t1 | MTR_4g057635 | 39.844 | 128 | 28 | 2 | 1 | 79 | 1 | 128 | 7.87e-20 | 87.8 |
| MS.gene84530.t1 | MTR_7g076740 | 31.383 | 188 | 70 | 4 | 1 | 139 | 1 | 178 | 1.05e-19 | 87.0 |
| MS.gene84530.t1 | MTR_8g095390 | 35.606 | 132 | 37 | 1 | 1 | 84 | 1 | 132 | 1.48e-19 | 87.0 |
| MS.gene84530.t1 | MTR_7g110830 | 34.416 | 154 | 50 | 2 | 1 | 103 | 1 | 154 | 1.60e-19 | 87.4 |
| MS.gene84530.t1 | MTR_3g103570 | 41.176 | 119 | 21 | 2 | 1 | 70 | 1 | 119 | 2.12e-19 | 87.0 |
| MS.gene84530.t1 | MTR_1g085040 | 37.121 | 132 | 35 | 1 | 1 | 84 | 1 | 132 | 2.25e-19 | 87.0 |
| MS.gene84530.t1 | MTR_1g085640 | 36.364 | 132 | 36 | 1 | 1 | 84 | 1 | 132 | 5.30e-19 | 86.3 |
| MS.gene84530.t1 | MTR_1g100653 | 38.793 | 116 | 23 | 1 | 1 | 68 | 1 | 116 | 8.82e-19 | 84.3 |
| MS.gene84530.t1 | MTR_5g014990 | 41.176 | 119 | 21 | 2 | 1 | 70 | 1 | 119 | 9.79e-19 | 84.3 |
| MS.gene84530.t1 | MTR_4g105130 | 36.154 | 130 | 35 | 1 | 1 | 82 | 1 | 130 | 1.20e-18 | 84.7 |
| MS.gene84530.t1 | MTR_3g077110 | 37.209 | 129 | 33 | 1 | 1 | 81 | 1 | 129 | 1.31e-18 | 84.7 |
| MS.gene84530.t1 | MTR_1g017000 | 40.171 | 117 | 21 | 2 | 1 | 68 | 1 | 117 | 1.87e-18 | 82.8 |
| MS.gene84530.t1 | MTR_3g083540 | 36.800 | 125 | 31 | 1 | 5 | 81 | 34 | 158 | 1.11e-17 | 81.6 |
| MS.gene84530.t1 | MTR_7g102110 | 39.167 | 120 | 24 | 2 | 1 | 71 | 1 | 120 | 1.42e-17 | 80.9 |
| MS.gene84530.t1 | MTR_5g042030 | 36.975 | 119 | 27 | 1 | 12 | 82 | 7 | 125 | 4.80e-17 | 79.3 |
| MS.gene84530.t1 | MTR_7g087130 | 37.600 | 125 | 28 | 2 | 1 | 75 | 1 | 125 | 6.25e-17 | 79.7 |
| MS.gene84530.t1 | MTR_5g007370 | 35.156 | 128 | 35 | 1 | 1 | 80 | 1 | 128 | 6.44e-17 | 79.3 |
| MS.gene84530.t1 | MTR_2g064160 | 35.200 | 125 | 33 | 1 | 6 | 82 | 5 | 129 | 6.92e-17 | 79.3 |
| MS.gene84530.t1 | MTR_8g031360 | 36.364 | 165 | 45 | 7 | 1 | 105 | 1 | 165 | 1.23e-16 | 78.6 |
| MS.gene84530.t1 | MTR_0140s0030 | 37.931 | 116 | 24 | 1 | 1 | 68 | 2 | 117 | 1.32e-16 | 79.0 |
| MS.gene84530.t1 | MTR_0489s0020 | 37.931 | 116 | 24 | 1 | 1 | 68 | 2 | 117 | 1.32e-16 | 79.0 |
| MS.gene84530.t1 | MTR_1g112760 | 34.646 | 127 | 35 | 1 | 3 | 81 | 4 | 130 | 2.44e-16 | 76.6 |
| MS.gene84530.t1 | MTR_7g010210 | 37.069 | 116 | 25 | 1 | 1 | 68 | 1 | 116 | 3.20e-16 | 77.8 |
| MS.gene84530.t1 | MTR_7g111290 | 38.462 | 130 | 32 | 1 | 1 | 82 | 1 | 130 | 3.43e-16 | 78.2 |
| MS.gene84530.t1 | MTR_5g079670 | 34.400 | 125 | 34 | 1 | 3 | 79 | 2 | 126 | 3.85e-16 | 75.5 |
| MS.gene84530.t1 | MTR_7g010210 | 37.069 | 116 | 25 | 1 | 1 | 68 | 1 | 116 | 4.14e-16 | 76.6 |
| MS.gene84530.t1 | MTR_4g121460 | 34.483 | 116 | 28 | 1 | 1 | 68 | 1 | 116 | 7.42e-16 | 76.6 |
| MS.gene84530.t1 | MTR_1g043050 | 37.069 | 116 | 25 | 1 | 1 | 68 | 1 | 116 | 8.39e-16 | 75.5 |
| MS.gene84530.t1 | MTR_4g097570 | 40.000 | 110 | 17 | 2 | 1 | 61 | 1 | 110 | 9.13e-16 | 75.9 |
| MS.gene84530.t1 | MTR_1g043080 | 37.069 | 116 | 25 | 1 | 1 | 68 | 1 | 116 | 1.24e-15 | 75.1 |
| MS.gene84530.t1 | MTR_4g097570 | 39.640 | 111 | 17 | 2 | 1 | 61 | 1 | 111 | 1.26e-15 | 75.5 |
| MS.gene84530.t1 | MTR_6g090405 | 39.655 | 116 | 21 | 2 | 1 | 67 | 1 | 116 | 1.45e-15 | 74.7 |
| MS.gene84530.t1 | MTR_2g095520 | 38.739 | 111 | 19 | 2 | 1 | 62 | 1 | 111 | 1.91e-15 | 75.5 |
| MS.gene84530.t1 | MTR_1g076150 | 37.931 | 116 | 24 | 1 | 1 | 68 | 1 | 116 | 2.61e-15 | 74.3 |
| MS.gene84530.t1 | MTR_2g034790 | 32.759 | 116 | 30 | 1 | 1 | 68 | 1 | 116 | 8.42e-15 | 73.6 |
| MS.gene84530.t1 | MTR_3g039990 | 37.069 | 116 | 25 | 1 | 1 | 68 | 2 | 117 | 1.19e-14 | 73.2 |
| MS.gene84530.t1 | MTR_7g109320 | 32.759 | 116 | 30 | 1 | 1 | 68 | 1 | 116 | 1.27e-13 | 70.5 |
| MS.gene84530.t1 | MTR_6g012180 | 35.455 | 110 | 23 | 1 | 1 | 62 | 1 | 110 | 2.87e-13 | 68.9 |
| MS.gene84530.t1 | MTR_4g128670 | 36.937 | 111 | 21 | 2 | 1 | 62 | 1 | 111 | 5.75e-13 | 68.6 |
| MS.gene84530.t1 | MTR_8g098860 | 31.897 | 116 | 31 | 1 | 1 | 68 | 1 | 116 | 6.56e-12 | 65.1 |
| MS.gene84530.t1 | MTR_2g067420 | 32.110 | 109 | 26 | 1 | 2 | 62 | 4 | 112 | 4.90e-11 | 62.8 |
| MS.gene84530.t1 | MTR_7g111290 | 51.351 | 74 | 31 | 2 | 9 | 82 | 20 | 88 | 9.66e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84530.t1 | AT5G56110 | 43.807 | 331 | 120 | 6 | 1 | 276 | 1 | 320 | 1.27e-73 | 228 |
| MS.gene84530.t1 | AT3G28470 | 47.059 | 136 | 24 | 1 | 1 | 88 | 1 | 136 | 5.95e-26 | 104 |
| MS.gene84530.t1 | AT4G21440 | 37.179 | 156 | 47 | 2 | 1 | 105 | 1 | 156 | 1.55e-25 | 103 |
| MS.gene84530.t1 | AT4G28110 | 41.406 | 128 | 27 | 1 | 1 | 80 | 1 | 128 | 8.30e-25 | 100 |
| MS.gene84530.t1 | AT4G05100 | 42.636 | 129 | 25 | 2 | 1 | 80 | 1 | 129 | 1.23e-24 | 100 |
| MS.gene84530.t1 | AT1G34670 | 38.298 | 141 | 39 | 1 | 1 | 93 | 1 | 141 | 1.63e-23 | 98.6 |
| MS.gene84530.t1 | AT5G15310 | 36.047 | 172 | 53 | 3 | 1 | 115 | 1 | 172 | 3.87e-23 | 97.1 |
| MS.gene84530.t1 | AT5G15310 | 36.047 | 172 | 53 | 3 | 1 | 115 | 1 | 172 | 4.14e-23 | 96.7 |
| MS.gene84530.t1 | AT5G15310 | 39.844 | 128 | 29 | 1 | 1 | 80 | 1 | 128 | 4.41e-23 | 95.1 |
| MS.gene84530.t1 | AT3G02940 | 38.281 | 128 | 31 | 1 | 1 | 80 | 1 | 128 | 8.92e-23 | 95.5 |
| MS.gene84530.t1 | AT3G02940 | 38.281 | 128 | 31 | 1 | 1 | 80 | 1 | 128 | 1.25e-22 | 95.5 |
| MS.gene84530.t1 | AT3G02940 | 38.281 | 128 | 31 | 1 | 1 | 80 | 1 | 128 | 1.25e-22 | 95.5 |
| MS.gene84530.t1 | AT4G17785 | 37.956 | 137 | 36 | 2 | 1 | 88 | 1 | 137 | 2.66e-22 | 95.1 |
| MS.gene84530.t1 | AT4G17785 | 37.956 | 137 | 36 | 2 | 1 | 88 | 1 | 137 | 2.76e-22 | 95.1 |
| MS.gene84530.t1 | AT5G16770 | 38.281 | 128 | 31 | 1 | 1 | 80 | 1 | 128 | 3.00e-22 | 94.4 |
| MS.gene84530.t1 | AT5G16770 | 38.281 | 128 | 31 | 1 | 1 | 80 | 1 | 128 | 3.00e-22 | 94.4 |
| MS.gene84530.t1 | AT5G16770 | 38.281 | 128 | 31 | 1 | 1 | 80 | 1 | 128 | 4.59e-22 | 94.4 |
| MS.gene84530.t1 | AT5G16770 | 38.281 | 128 | 31 | 1 | 1 | 80 | 1 | 128 | 4.59e-22 | 94.4 |
| MS.gene84530.t1 | AT3G01140 | 33.721 | 172 | 57 | 2 | 1 | 115 | 1 | 172 | 5.08e-22 | 94.4 |
| MS.gene84530.t1 | AT1G66230 | 37.778 | 135 | 36 | 1 | 1 | 87 | 1 | 135 | 6.90e-22 | 92.8 |
| MS.gene84530.t1 | AT3G61250 | 36.424 | 151 | 45 | 3 | 1 | 102 | 1 | 149 | 7.73e-22 | 92.8 |
| MS.gene84530.t1 | AT4G34990 | 37.692 | 130 | 33 | 1 | 1 | 82 | 1 | 130 | 1.06e-21 | 92.0 |
| MS.gene84530.t1 | AT5G16600 | 38.462 | 130 | 32 | 1 | 1 | 82 | 1 | 130 | 9.68e-21 | 90.5 |
| MS.gene84530.t1 | AT5G14340 | 34.848 | 132 | 38 | 1 | 1 | 84 | 13 | 144 | 1.14e-20 | 89.4 |
| MS.gene84530.t1 | AT4G22680 | 36.364 | 143 | 43 | 1 | 1 | 95 | 1 | 143 | 1.21e-20 | 89.0 |
| MS.gene84530.t1 | AT2G16720 | 37.008 | 127 | 32 | 1 | 1 | 79 | 1 | 127 | 1.41e-20 | 89.0 |
| MS.gene84530.t1 | AT5G10280 | 33.333 | 141 | 46 | 1 | 1 | 93 | 1 | 141 | 2.34e-20 | 89.4 |
| MS.gene84530.t1 | AT5G07690 | 37.405 | 131 | 34 | 1 | 1 | 83 | 1 | 131 | 5.68e-20 | 88.2 |
| MS.gene84530.t1 | AT5G60890 | 34.884 | 129 | 36 | 1 | 1 | 81 | 1 | 129 | 6.61e-20 | 87.4 |
| MS.gene84530.t1 | AT5G61420 | 37.692 | 130 | 33 | 1 | 1 | 82 | 1 | 130 | 6.93e-20 | 88.6 |
| MS.gene84530.t1 | AT4G09460 | 33.333 | 144 | 48 | 1 | 1 | 96 | 1 | 144 | 8.43e-20 | 86.3 |
| MS.gene84530.t1 | AT4G38620 | 34.884 | 129 | 36 | 1 | 1 | 81 | 1 | 129 | 1.10e-19 | 86.7 |
| MS.gene84530.t1 | AT3G01140 | 32.738 | 168 | 56 | 2 | 5 | 115 | 48 | 215 | 1.11e-19 | 88.2 |
| MS.gene84530.t1 | AT4G12350 | 37.037 | 135 | 37 | 1 | 1 | 87 | 1 | 135 | 1.26e-19 | 86.7 |
| MS.gene84530.t1 | AT4G01680 | 37.681 | 138 | 34 | 2 | 1 | 90 | 1 | 134 | 2.75e-19 | 84.7 |
| MS.gene84530.t1 | AT5G54230 | 38.346 | 133 | 34 | 1 | 1 | 85 | 1 | 133 | 4.62e-19 | 85.5 |
| MS.gene84530.t1 | AT1G35515 | 33.121 | 157 | 53 | 2 | 1 | 109 | 1 | 153 | 5.55e-19 | 83.6 |
| MS.gene84530.t1 | AT1G57560 | 35.556 | 135 | 39 | 1 | 1 | 87 | 1 | 135 | 6.55e-19 | 85.1 |
| MS.gene84530.t1 | AT4G01680 | 37.681 | 138 | 34 | 2 | 1 | 90 | 1 | 134 | 7.25e-19 | 85.1 |
| MS.gene84530.t1 | AT1G57560 | 36.154 | 130 | 35 | 1 | 1 | 82 | 1 | 130 | 1.61e-18 | 83.6 |
| MS.gene84530.t1 | AT1G18570 | 35.878 | 131 | 35 | 2 | 1 | 82 | 1 | 131 | 2.51e-18 | 84.0 |
| MS.gene84530.t1 | AT5G65230 | 35.938 | 128 | 34 | 1 | 1 | 80 | 1 | 128 | 2.59e-18 | 83.6 |
| MS.gene84530.t1 | AT5G26660 | 36.434 | 129 | 34 | 1 | 1 | 81 | 1 | 129 | 2.77e-18 | 84.0 |
| MS.gene84530.t1 | AT1G18710 | 35.659 | 129 | 35 | 1 | 1 | 81 | 1 | 129 | 4.08e-18 | 82.0 |
| MS.gene84530.t1 | AT1G22640 | 34.646 | 127 | 35 | 1 | 1 | 79 | 1 | 127 | 8.17e-18 | 81.3 |
| MS.gene84530.t1 | AT5G57620 | 40.336 | 119 | 22 | 2 | 1 | 70 | 1 | 119 | 8.93e-18 | 82.0 |
| MS.gene84530.t1 | AT5G07700 | 36.923 | 130 | 34 | 1 | 1 | 82 | 1 | 130 | 1.34e-17 | 81.6 |
| MS.gene84530.t1 | AT5G07700 | 36.923 | 130 | 34 | 1 | 1 | 82 | 1 | 130 | 1.34e-17 | 81.6 |
| MS.gene84530.t1 | AT1G74650 | 40.336 | 119 | 23 | 1 | 1 | 71 | 1 | 119 | 1.40e-17 | 81.6 |
| MS.gene84530.t1 | AT3G23250 | 38.793 | 116 | 23 | 1 | 1 | 68 | 1 | 116 | 1.67e-17 | 80.9 |
| MS.gene84530.t1 | AT1G09540 | 34.848 | 132 | 38 | 1 | 1 | 84 | 1 | 132 | 1.68e-17 | 81.6 |
| MS.gene84530.t1 | AT2G47460 | 32.877 | 146 | 50 | 1 | 1 | 98 | 1 | 146 | 1.81e-17 | 81.6 |
| MS.gene84530.t1 | AT1G74430 | 34.375 | 128 | 36 | 1 | 1 | 80 | 1 | 128 | 3.50e-17 | 79.7 |
| MS.gene84530.t1 | AT1G74080 | 33.333 | 129 | 38 | 1 | 1 | 81 | 1 | 129 | 3.66e-17 | 80.5 |
| MS.gene84530.t1 | AT3G49690 | 40.171 | 117 | 21 | 2 | 1 | 68 | 1 | 117 | 3.74e-17 | 80.1 |
| MS.gene84530.t1 | AT3G13540 | 36.000 | 125 | 32 | 1 | 5 | 81 | 16 | 140 | 3.83e-17 | 79.3 |
| MS.gene84530.t1 | AT2G36890 | 35.948 | 153 | 29 | 3 | 1 | 104 | 1 | 133 | 3.87e-17 | 80.1 |
| MS.gene84530.t1 | AT2G36890 | 35.948 | 153 | 29 | 3 | 1 | 104 | 42 | 174 | 5.82e-17 | 80.1 |
| MS.gene84530.t1 | AT2G31180 | 39.316 | 117 | 23 | 1 | 1 | 69 | 1 | 117 | 6.59e-17 | 78.6 |
| MS.gene84530.t1 | AT5G62470 | 39.130 | 115 | 23 | 1 | 1 | 68 | 1 | 115 | 1.42e-16 | 79.0 |
| MS.gene84530.t1 | AT5G65790 | 39.316 | 117 | 22 | 2 | 1 | 68 | 1 | 117 | 1.71e-16 | 79.0 |
| MS.gene84530.t1 | AT5G62470 | 38.793 | 116 | 23 | 1 | 1 | 68 | 1 | 116 | 2.00e-16 | 78.6 |
| MS.gene84530.t1 | AT3G47600 | 37.815 | 119 | 26 | 1 | 1 | 71 | 1 | 119 | 3.04e-16 | 77.8 |
| MS.gene84530.t1 | AT1G08810 | 37.931 | 116 | 24 | 1 | 1 | 68 | 1 | 116 | 3.36e-16 | 77.0 |
| MS.gene84530.t1 | AT1G18960 | 47.059 | 85 | 40 | 2 | 3 | 87 | 49 | 128 | 3.72e-16 | 77.4 |
| MS.gene84530.t1 | AT3G62610 | 35.593 | 118 | 28 | 1 | 1 | 70 | 1 | 118 | 6.80e-16 | 77.0 |
| MS.gene84530.t1 | AT5G23000 | 38.462 | 117 | 23 | 2 | 1 | 68 | 1 | 117 | 8.00e-16 | 76.6 |
| MS.gene84530.t1 | AT1G79180 | 35.433 | 127 | 31 | 2 | 2 | 77 | 4 | 130 | 1.43e-15 | 75.5 |
| MS.gene84530.t1 | AT3G28910 | 36.066 | 122 | 30 | 1 | 1 | 74 | 1 | 122 | 2.44e-15 | 75.1 |
| MS.gene84530.t1 | AT4G37780 | 37.607 | 117 | 24 | 2 | 1 | 68 | 1 | 117 | 3.10e-15 | 74.7 |
| MS.gene84530.t1 | AT5G62320 | 32.117 | 137 | 38 | 2 | 2 | 83 | 3 | 139 | 5.22e-15 | 73.2 |
| MS.gene84530.t1 | AT1G56160 | 35.345 | 116 | 27 | 1 | 2 | 69 | 4 | 119 | 7.92e-15 | 73.6 |
| MS.gene84530.t1 | AT1G06180 | 36.207 | 116 | 26 | 1 | 1 | 68 | 1 | 116 | 2.90e-14 | 71.2 |
| MS.gene84530.t1 | AT5G49330 | 33.621 | 116 | 29 | 1 | 1 | 68 | 1 | 116 | 3.85e-14 | 72.0 |
| MS.gene84530.t1 | AT4G01680 | 50.000 | 82 | 32 | 3 | 9 | 90 | 74 | 146 | 4.71e-13 | 68.6 |
| MS.gene84530.t1 | AT1G22640 | 46.377 | 69 | 32 | 2 | 11 | 79 | 7 | 70 | 3.37e-12 | 64.3 |
| MS.gene84530.t1 | AT4G28110 | 69.444 | 36 | 11 | 0 | 45 | 80 | 9 | 44 | 7.33e-12 | 63.5 |
| MS.gene84530.t1 | AT5G26660 | 46.575 | 73 | 34 | 2 | 9 | 81 | 31 | 98 | 9.08e-12 | 64.7 |
| MS.gene84530.t1 | AT1G71030 | 45.833 | 72 | 34 | 2 | 12 | 83 | 19 | 85 | 2.83e-11 | 61.6 |
| MS.gene84530.t1 | AT1G71030 | 45.833 | 72 | 34 | 2 | 12 | 83 | 33 | 99 | 3.96e-11 | 61.2 |
| MS.gene84530.t1 | AT5G15310 | 72.222 | 36 | 10 | 0 | 45 | 80 | 14 | 49 | 4.12e-11 | 62.0 |
| MS.gene84530.t1 | AT1G79180 | 55.319 | 47 | 21 | 0 | 2 | 48 | 4 | 50 | 6.20e-11 | 62.4 |
| MS.gene84530.t1 | AT5G14340 | 57.500 | 40 | 17 | 0 | 45 | 84 | 15 | 54 | 9.49e-11 | 60.1 |
| MS.gene84530.t1 | AT5G61420 | 54.717 | 53 | 18 | 2 | 32 | 82 | 3 | 51 | 9.90e-11 | 61.6 |
Find 79 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGCCATTCTCCCATTTAA+TGG | 0.217063 | 3.1:+46019256 | MS.gene84530:CDS |
| TAGCAATTTCAGCCATTAAA+TGG | 0.223128 | 3.1:-46019268 | None:intergenic |
| CATTTCTTGTTCTTGTTGTA+TGG | 0.251023 | 3.1:-46019501 | None:intergenic |
| GCAGCATCTTCTCTTTCTTC+TGG | 0.254615 | 3.1:-46019449 | None:intergenic |
| CAATTCAGCCCATCATGTTT+TGG | 0.275499 | 3.1:+46019614 | MS.gene84530:CDS |
| TGTTGGCCCTGGTAGTTAAT+TGG | 0.282501 | 3.1:-46019380 | None:intergenic |
| CTCAACATGGCACTCGCAAC+TGG | 0.327158 | 3.1:+46018766 | MS.gene84530:CDS |
| CTGGTAGTTAATTGGCTTCC+TGG | 0.331694 | 3.1:-46019372 | None:intergenic |
| GAGGGACTAACCAGCATTCT+TGG | 0.332303 | 3.1:-46018799 | None:intergenic |
| AATGTTTACCCTACAATGTC+TGG | 0.342765 | 3.1:+46019587 | MS.gene84530:CDS |
| ACAGTCTGAGTTGAATATAT+TGG | 0.366444 | 3.1:-46019783 | None:intergenic |
| GATTAAGTTTGACCTATCTA+AGG | 0.367315 | 3.1:+46019478 | MS.gene84530:CDS |
| GAGAATGGCTTGTGGGTGAC+AGG | 0.403681 | 3.1:-46019245 | None:intergenic |
| CTTGTTGTATGGCCTTAGAT+AGG | 0.418669 | 3.1:-46019490 | None:intergenic |
| TATAATATTTCTTATACCAT+AGG | 0.421907 | 3.1:-46019842 | None:intergenic |
| CCAACATTCTAATGAAGCTC+TGG | 0.425128 | 3.1:+46019397 | MS.gene84530:CDS |
| GTGTCCCAAGGTTTATTTGT+GGG | 0.425448 | 3.1:-46019527 | None:intergenic |
| CTGATAGCAGCGCAGCTGCC+AGG | 0.436902 | 3.1:+46019149 | MS.gene84530:intron |
| TCAGCCATTAAATGGGAGAA+TGG | 0.437379 | 3.1:-46019260 | None:intergenic |
| CCTTTATTGCCAAAACATGA+TGG | 0.447943 | 3.1:-46019623 | None:intergenic |
| TGCTTCCAGTACATAAACTT+TGG | 0.463807 | 3.1:-46019664 | None:intergenic |
| ATTGTAGGGTAAACATTGTA+TGG | 0.467777 | 3.1:-46019581 | None:intergenic |
| GAGAGCTTGTTATCTTCCTC+AGG | 0.467842 | 3.1:-46018732 | None:intergenic |
| ATAATATTTCTTATACCATA+GGG | 0.469555 | 3.1:-46019841 | None:intergenic |
| ACATCATTGTCGGTGCGTCC+TGG | 0.471385 | 3.1:-46019167 | None:intergenic |
| CATACAACAAGAACAAGAAA+TGG | 0.471573 | 3.1:+46019502 | MS.gene84530:CDS |
| AGCAATTTCAGCCATTAAAT+GGG | 0.472879 | 3.1:-46019267 | None:intergenic |
| CCAGAGCTTCATTAGAATGT+TGG | 0.479076 | 3.1:-46019397 | None:intergenic |
| AGGGACTAACCAGCATTCTT+GGG | 0.483633 | 3.1:-46018798 | None:intergenic |
| AATTGAAACCCAGACATTGT+AGG | 0.493777 | 3.1:-46019596 | None:intergenic |
| CACCTAGCTGAAGCAGCCCT+TGG | 0.495944 | 3.1:+46019317 | MS.gene84530:CDS |
| TAATTGGCTTCCTGGTAAGA+AGG | 0.496087 | 3.1:-46019364 | None:intergenic |
| GTACATAAACTTTGGCTCCA+TGG | 0.498108 | 3.1:-46019656 | None:intergenic |
| CGCCTCATTCCCAAGAATGC+TGG | 0.504148 | 3.1:+46018789 | MS.gene84530:CDS |
| GCCATGTTGAGCAATGTAAG+AGG | 0.506799 | 3.1:-46018754 | None:intergenic |
| GGCTGAAATTGCTACAACAT+TGG | 0.510087 | 3.1:+46019277 | MS.gene84530:CDS |
| CGATGATTTAATGAACCCTA+TGG | 0.511276 | 3.1:+46019826 | MS.gene84530:CDS |
| CAGGAAGCCAATTAACTACC+AGG | 0.514872 | 3.1:+46019373 | MS.gene84530:CDS |
| AGGTGCTCCACCTTCTTACC+AGG | 0.518602 | 3.1:+46019354 | MS.gene84530:CDS |
| CCTTGGTTGTTTCAAAGATG+AGG | 0.521377 | 3.1:+46019334 | MS.gene84530:CDS |
| TGGAGCCAAAGTTTATGTAC+TGG | 0.524375 | 3.1:+46019659 | MS.gene84530:CDS |
| AGAATGGCTTGTGGGTGACA+GGG | 0.524652 | 3.1:-46019244 | None:intergenic |
| GGTACCCACAAATAAACCTT+GGG | 0.525783 | 3.1:+46019523 | MS.gene84530:CDS |
| ATGTTTACCCTACAATGTCT+GGG | 0.526506 | 3.1:+46019588 | MS.gene84530:CDS |
| GCTAGGTGAGCTGCCTGTGG+CGG | 0.527045 | 3.1:-46019302 | None:intergenic |
| ATTGAAACCCAGACATTGTA+GGG | 0.535977 | 3.1:-46019595 | None:intergenic |
| CATAGGGTTCATTAAATCAT+CGG | 0.538774 | 3.1:-46019825 | None:intergenic |
| CAACATTCTAATGAAGCTCT+GGG | 0.540066 | 3.1:+46019398 | MS.gene84530:CDS |
| AACCAGCATTCTTGGGAATG+AGG | 0.548940 | 3.1:-46018791 | None:intergenic |
| CTTTATTGCCAAAACATGAT+GGG | 0.551853 | 3.1:-46019622 | None:intergenic |
| GGGTTCATTAAATCATCGGC+TGG | 0.556449 | 3.1:-46019821 | None:intergenic |
| CTTCATTAGAATGTTGGCCC+TGG | 0.558141 | 3.1:-46019391 | None:intergenic |
| ACTTGCAGTTGTTGCTGCAG+TGG | 0.558821 | 3.1:-46019549 | None:intergenic |
| TCCTCTTACATTGCTCAACA+TGG | 0.561657 | 3.1:+46018753 | MS.gene84530:CDS |
| TACAACATTGGCACCGCCAC+AGG | 0.565334 | 3.1:+46019289 | MS.gene84530:CDS |
| TGGTACCCACAAATAAACCT+TGG | 0.568184 | 3.1:+46019522 | MS.gene84530:CDS |
| GGTGTCCCAAGGTTTATTTG+TGG | 0.570222 | 3.1:-46019528 | None:intergenic |
| GTTGCTGCAGTGGTGTCCCA+AGG | 0.570689 | 3.1:-46019539 | None:intergenic |
| ACATTGTCCTTCTCACAGCA+TGG | 0.579859 | 3.1:-46018690 | None:intergenic |
| TAAATGGGAGAATGGCTTGT+GGG | 0.580198 | 3.1:-46019252 | None:intergenic |
| TCGTATTCCATGCTGTGAGA+AGG | 0.593369 | 3.1:+46018683 | MS.gene84530:CDS |
| TCAACTCAGACTGTGTCGTG+TGG | 0.600659 | 3.1:+46019792 | MS.gene84530:CDS |
| CAACTCAGACTGTGTCGTGT+GGG | 0.601754 | 3.1:+46019793 | MS.gene84530:CDS |
| TGGAAGCACATGCATAGCCA+TGG | 0.601860 | 3.1:+46019679 | MS.gene84530:CDS |
| TTGGCTTCCTGGTAAGAAGG+TGG | 0.602905 | 3.1:-46019361 | None:intergenic |
| AAACTGGCTTTGCTGATCCA+TGG | 0.603647 | 3.1:-46019696 | None:intergenic |
| TCAGCTAGGTGAGCTGCCTG+TGG | 0.608657 | 3.1:-46019305 | None:intergenic |
| AACCAAGGGCTGCTTCAGCT+AGG | 0.608754 | 3.1:-46019319 | None:intergenic |
| AAAACTTGAAGAGGAAAATG+GGG | 0.610613 | 3.1:+46019724 | MS.gene84530:CDS |
| GGAAAATGGGGATGATTCTG+AGG | 0.614466 | 3.1:+46019736 | MS.gene84530:CDS |
| GAGAGGACAGTGGACACCTG+AGG | 0.636969 | 3.1:+46018716 | MS.gene84530:CDS |
| CCTCATCTTTGAAACAACCA+AGG | 0.643946 | 3.1:-46019334 | None:intergenic |
| CTCATCTTTGAAACAACCAA+GGG | 0.652070 | 3.1:-46019333 | None:intergenic |
| GAGAAGGACAATGTGAAGAG+AGG | 0.655263 | 3.1:+46018699 | MS.gene84530:CDS |
| AGGAAGCCAATTAACTACCA+GGG | 0.690655 | 3.1:+46019374 | MS.gene84530:CDS |
| ATAAAGGGGATGCATCACCA+TGG | 0.694152 | 3.1:+46019639 | MS.gene84530:CDS |
| TTAAATGGGAGAATGGCTTG+TGG | 0.703670 | 3.1:-46019253 | None:intergenic |
| AACATTCTAATGAAGCTCTG+GGG | 0.732971 | 3.1:+46019399 | MS.gene84530:CDS |
| ACAATGTGAAGAGAGGACAG+TGG | 0.746981 | 3.1:+46018706 | MS.gene84530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTGGATTAAATTAAAT+AGG | + | chr3.1:46018882-46018901 | MS.gene84530:intron | 15.0% |
| !! | AGATTATATTTAGACGAATA+GGG | - | chr3.1:46018826-46018845 | None:intergenic | 20.0% |
| !! | CAAATGTTATATATGCATTA+AGG | + | chr3.1:46019040-46019059 | MS.gene84530:intron | 20.0% |
| !! | TAATGCATATATAACATTTG+TGG | - | chr3.1:46019040-46019059 | None:intergenic | 20.0% |
| !!! | ACTTTAATACTTGATTTTTG+TGG | + | chr3.1:46018867-46018886 | MS.gene84530:intron | 20.0% |
| ! | AAAAACTTGAAGAGGAAAAT+GGG | + | chr3.1:46019723-46019742 | MS.gene84530:CDS | 25.0% |
| ! | ACAATGATGTCAAAAATCAT+TGG | + | chr3.1:46019180-46019199 | MS.gene84530:CDS | 25.0% |
| ! | CAGATTATATTTAGACGAAT+AGG | - | chr3.1:46018827-46018846 | None:intergenic | 25.0% |
| ! | TGAGATTCTCTTTATCATAT+TGG | + | chr3.1:46019092-46019111 | MS.gene84530:intron | 25.0% |
| !! | ATGATTTTTGACATCATTGT+CGG | - | chr3.1:46019180-46019199 | None:intergenic | 25.0% |
| !!! | TTGGTAATGATTTGCTTAAA+TGG | + | chr3.1:46019111-46019130 | MS.gene84530:intron | 25.0% |
| AAAACTTGAAGAGGAAAATG+GGG | + | chr3.1:46019724-46019743 | MS.gene84530:CDS | 30.0% | |
| AGCAATTTCAGCCATTAAAT+GGG | - | chr3.1:46019270-46019289 | None:intergenic | 30.0% | |
| ATTGTAGGGTAAACATTGTA+TGG | - | chr3.1:46019584-46019603 | None:intergenic | 30.0% | |
| CATACAACAAGAACAAGAAA+TGG | + | chr3.1:46019502-46019521 | MS.gene84530:CDS | 30.0% | |
| CATAGGGTTCATTAAATCAT+CGG | - | chr3.1:46019828-46019847 | None:intergenic | 30.0% | |
| CTTTATTGCCAAAACATGAT+GGG | - | chr3.1:46019625-46019644 | None:intergenic | 30.0% | |
| GAAAAACTTGAAGAGGAAAA+TGG | + | chr3.1:46019722-46019741 | MS.gene84530:CDS | 30.0% | |
| GATTAAGTTTGACCTATCTA+AGG | + | chr3.1:46019478-46019497 | MS.gene84530:CDS | 30.0% | |
| GTTTCATGAAAAACTTGAAG+AGG | + | chr3.1:46019715-46019734 | MS.gene84530:CDS | 30.0% | |
| TAGCAATTTCAGCCATTAAA+TGG | - | chr3.1:46019271-46019290 | None:intergenic | 30.0% | |
| ! | ACAGTCTGAGTTGAATATAT+TGG | - | chr3.1:46019786-46019805 | None:intergenic | 30.0% |
| ! | CATTTCTTGTTCTTGTTGTA+TGG | - | chr3.1:46019504-46019523 | None:intergenic | 30.0% |
| !! | CTTCAAGTTTTTCATGAAAC+TGG | - | chr3.1:46019715-46019734 | None:intergenic | 30.0% |
| !!! | ATCATGTTTTGGCAATAAAG+GGG | + | chr3.1:46019625-46019644 | MS.gene84530:CDS | 30.0% |
| !!! | CATCATGTTTTGGCAATAAA+GGG | + | chr3.1:46019624-46019643 | MS.gene84530:CDS | 30.0% |
| !!! | TTCATTCAGTTTTTGGTAAC+AGG | + | chr3.1:46019012-46019031 | MS.gene84530:intron | 30.0% |
| AAAAAGAAACTGTCAGGCAT+GGG | + | chr3.1:46019215-46019234 | MS.gene84530:CDS | 35.0% | |
| AACATTCTAATGAAGCTCTG+GGG | + | chr3.1:46019399-46019418 | MS.gene84530:CDS | 35.0% | |
| AAGCTGAAAAAGAAACTGTC+AGG | + | chr3.1:46019209-46019228 | MS.gene84530:CDS | 35.0% | |
| AATGTTTACCCTACAATGTC+TGG | + | chr3.1:46019587-46019606 | MS.gene84530:CDS | 35.0% | |
| AATTGAAACCCAGACATTGT+AGG | - | chr3.1:46019599-46019618 | None:intergenic | 35.0% | |
| ATATTTAGACGAATAGGGAG+AGG | - | chr3.1:46018821-46018840 | None:intergenic | 35.0% | |
| ATGTTTACCCTACAATGTCT+GGG | + | chr3.1:46019588-46019607 | MS.gene84530:CDS | 35.0% | |
| ATTGAAACCCAGACATTGTA+GGG | - | chr3.1:46019598-46019617 | None:intergenic | 35.0% | |
| CAACATTCTAATGAAGCTCT+GGG | + | chr3.1:46019398-46019417 | MS.gene84530:CDS | 35.0% | |
| CCTTTATTGCCAAAACATGA+TGG | - | chr3.1:46019626-46019645 | None:intergenic | 35.0% | |
| CGATGATTTAATGAACCCTA+TGG | + | chr3.1:46019826-46019845 | MS.gene84530:CDS | 35.0% | |
| TAAATAGGTCTTCAGAGATG+TGG | + | chr3.1:46018897-46018916 | MS.gene84530:intron | 35.0% | |
| TATTTAGACGAATAGGGAGA+GGG | - | chr3.1:46018820-46018839 | None:intergenic | 35.0% | |
| TGCTTAAATGGTTGTTCAGA+TGG | + | chr3.1:46019123-46019142 | MS.gene84530:intron | 35.0% | |
| TGCTTCCAGTACATAAACTT+TGG | - | chr3.1:46019667-46019686 | None:intergenic | 35.0% | |
| ! | GTGAAGCTTCATTCAGTTTT+TGG | + | chr3.1:46019005-46019024 | MS.gene84530:intron | 35.0% |
| !! | CTCATCTTTGAAACAACCAA+GGG | - | chr3.1:46019336-46019355 | None:intergenic | 35.0% |
| !!! | CCATCATGTTTTGGCAATAA+AGG | + | chr3.1:46019623-46019642 | MS.gene84530:CDS | 35.0% |
| !!! | TGACAGTTTCTTTTTCAGCT+TGG | - | chr3.1:46019210-46019229 | None:intergenic | 35.0% |
| AAATGGCCATGTTTCAGATC+AGG | - | chr3.1:46018960-46018979 | None:intergenic | 40.0% | |
| AATGGCCATGTTTCAGATCA+GGG | - | chr3.1:46018959-46018978 | None:intergenic | 40.0% | |
| AGGAAGCCAATTAACTACCA+GGG | + | chr3.1:46019374-46019393 | MS.gene84530:CDS | 40.0% | |
| CAAGCCATTCTCCCATTTAA+TGG | + | chr3.1:46019256-46019275 | MS.gene84530:CDS | 40.0% | |
| CCAACATTCTAATGAAGCTC+TGG | + | chr3.1:46019397-46019416 | MS.gene84530:CDS | 40.0% | |
| CCAGAGCTTCATTAGAATGT+TGG | - | chr3.1:46019400-46019419 | None:intergenic | 40.0% | |
| GAAAAAGAAACTGTCAGGCA+TGG | + | chr3.1:46019214-46019233 | MS.gene84530:CDS | 40.0% | |
| GGCTGAAATTGCTACAACAT+TGG | + | chr3.1:46019277-46019296 | MS.gene84530:CDS | 40.0% | |
| GGTACCCACAAATAAACCTT+GGG | + | chr3.1:46019523-46019542 | MS.gene84530:CDS | 40.0% | |
| GTGTCCCAAGGTTTATTTGT+GGG | - | chr3.1:46019530-46019549 | None:intergenic | 40.0% | |
| TCAGCCATTAAATGGGAGAA+TGG | - | chr3.1:46019263-46019282 | None:intergenic | 40.0% | |
| TCCTCTTACATTGCTCAACA+TGG | + | chr3.1:46018753-46018772 | MS.gene84530:CDS | 40.0% | |
| TGGAGCCAAAGTTTATGTAC+TGG | + | chr3.1:46019659-46019678 | MS.gene84530:CDS | 40.0% | |
| TGGTACCCACAAATAAACCT+TGG | + | chr3.1:46019522-46019541 | MS.gene84530:CDS | 40.0% | |
| TTAAATGGGAGAATGGCTTG+TGG | - | chr3.1:46019256-46019275 | None:intergenic | 40.0% | |
| ! | CAATTCAGCCCATCATGTTT+TGG | + | chr3.1:46019614-46019633 | MS.gene84530:CDS | 40.0% |
| ! | CCTTGGTTGTTTCAAAGATG+AGG | + | chr3.1:46019334-46019353 | MS.gene84530:CDS | 40.0% |
| ! | CTTGTTGTATGGCCTTAGAT+AGG | - | chr3.1:46019493-46019512 | None:intergenic | 40.0% |
| ! | GTACATAAACTTTGGCTCCA+TGG | - | chr3.1:46019659-46019678 | None:intergenic | 40.0% |
| ! | TAAATGGGAGAATGGCTTGT+GGG | - | chr3.1:46019255-46019274 | None:intergenic | 40.0% |
| ! | TAATTGGCTTCCTGGTAAGA+AGG | - | chr3.1:46019367-46019386 | None:intergenic | 40.0% |
| ! | TCTGAAACATGGCCATTTCT+CGG | + | chr3.1:46018962-46018981 | MS.gene84530:intron | 40.0% |
| !! | CCTCATCTTTGAAACAACCA+AGG | - | chr3.1:46019337-46019356 | None:intergenic | 40.0% |
| AAACATGGCCATTTCTCGGA+TGG | + | chr3.1:46018966-46018985 | MS.gene84530:intron | 45.0% | |
| AACCAGCATTCTTGGGAATG+AGG | - | chr3.1:46018794-46018813 | None:intergenic | 45.0% | |
| ACAATGTGAAGAGAGGACAG+TGG | + | chr3.1:46018706-46018725 | MS.gene84530:CDS | 45.0% | |
| ACATTGTCCTTCTCACAGCA+TGG | - | chr3.1:46018693-46018712 | None:intergenic | 45.0% | |
| AGGGACTAACCAGCATTCTT+GGG | - | chr3.1:46018801-46018820 | None:intergenic | 45.0% | |
| ATAAAGGGGATGCATCACCA+TGG | + | chr3.1:46019639-46019658 | MS.gene84530:CDS | 45.0% | |
| CAGGAAGCCAATTAACTACC+AGG | + | chr3.1:46019373-46019392 | MS.gene84530:CDS | 45.0% | |
| CTTCATTAGAATGTTGGCCC+TGG | - | chr3.1:46019394-46019413 | None:intergenic | 45.0% | |
| GAGAAGGACAATGTGAAGAG+AGG | + | chr3.1:46018699-46018718 | MS.gene84530:CDS | 45.0% | |
| GCAGCATCTTCTCTTTCTTC+TGG | - | chr3.1:46019452-46019471 | None:intergenic | 45.0% | |
| GCCATGTTGAGCAATGTAAG+AGG | - | chr3.1:46018757-46018776 | None:intergenic | 45.0% | |
| GGAAAATGGGGATGATTCTG+AGG | + | chr3.1:46019736-46019755 | MS.gene84530:CDS | 45.0% | |
| GGGTTCATTAAATCATCGGC+TGG | - | chr3.1:46019824-46019843 | None:intergenic | 45.0% | |
| GGTGTCCCAAGGTTTATTTG+TGG | - | chr3.1:46019531-46019550 | None:intergenic | 45.0% | |
| TCGTATTCCATGCTGTGAGA+AGG | + | chr3.1:46018683-46018702 | MS.gene84530:CDS | 45.0% | |
| TGTTGGCCCTGGTAGTTAAT+TGG | - | chr3.1:46019383-46019402 | None:intergenic | 45.0% | |
| ! | CTGGTAGTTAATTGGCTTCC+TGG | - | chr3.1:46019375-46019394 | None:intergenic | 45.0% |
| !! | AAACTGGCTTTGCTGATCCA+TGG | - | chr3.1:46019699-46019718 | None:intergenic | 45.0% |
| !! | GAGAGCTTGTTATCTTCCTC+AGG | - | chr3.1:46018735-46018754 | None:intergenic | 45.0% |
| ACTTGCAGTTGTTGCTGCAG+TGG | - | chr3.1:46019552-46019571 | None:intergenic | 50.0% | |
| AGAGATGTGGAAAGAGCTGC+AGG | + | chr3.1:46018910-46018929 | MS.gene84530:intron | 50.0% | |
| CAACTCAGACTGTGTCGTGT+GGG | + | chr3.1:46019793-46019812 | MS.gene84530:CDS | 50.0% | |
| CATGTTTCAGATCAGGGCGA+AGG | - | chr3.1:46018953-46018972 | None:intergenic | 50.0% | |
| GAGGGACTAACCAGCATTCT+TGG | - | chr3.1:46018802-46018821 | None:intergenic | 50.0% | |
| GCTCTTCTCCATCCGAGAAA+TGG | - | chr3.1:46018977-46018996 | None:intergenic | 50.0% | |
| TCAACTCAGACTGTGTCGTG+TGG | + | chr3.1:46019792-46019811 | MS.gene84530:CDS | 50.0% | |
| TTGGCTTCCTGGTAAGAAGG+TGG | - | chr3.1:46019364-46019383 | None:intergenic | 50.0% | |
| ! | AGAATGGCTTGTGGGTGACA+GGG | - | chr3.1:46019247-46019266 | None:intergenic | 50.0% |
| ! | CTTCGCCCTGATCTGAAACA+TGG | + | chr3.1:46018951-46018970 | MS.gene84530:intron | 50.0% |
| ! | TGGAAGCACATGCATAGCCA+TGG | + | chr3.1:46019679-46019698 | MS.gene84530:CDS | 50.0% |
| AACCAAGGGCTGCTTCAGCT+AGG | - | chr3.1:46019322-46019341 | None:intergenic | 55.0% | |
| ACATCATTGTCGGTGCGTCC+TGG | - | chr3.1:46019170-46019189 | None:intergenic | 55.0% | |
| AGGTGCTCCACCTTCTTACC+AGG | + | chr3.1:46019354-46019373 | MS.gene84530:CDS | 55.0% | |
| CGCCTCATTCCCAAGAATGC+TGG | + | chr3.1:46018789-46018808 | MS.gene84530:CDS | 55.0% | |
| CTCAACATGGCACTCGCAAC+TGG | + | chr3.1:46018766-46018785 | MS.gene84530:CDS | 55.0% | |
| GAAAGAGCTGCAGGCTAAGG+TGG | + | chr3.1:46018919-46018938 | MS.gene84530:intron | 55.0% | |
| GTGGAAAGAGCTGCAGGCTA+AGG | + | chr3.1:46018916-46018935 | MS.gene84530:intron | 55.0% | |
| TACAACATTGGCACCGCCAC+AGG | + | chr3.1:46019289-46019308 | MS.gene84530:CDS | 55.0% | |
| ! | GAGAATGGCTTGTGGGTGAC+AGG | - | chr3.1:46019248-46019267 | None:intergenic | 55.0% |
| CACCTAGCTGAAGCAGCCCT+TGG | + | chr3.1:46019317-46019336 | MS.gene84530:CDS | 60.0% | |
| GAGAGGACAGTGGACACCTG+AGG | + | chr3.1:46018716-46018735 | MS.gene84530:CDS | 60.0% | |
| GTTGCTGCAGTGGTGTCCCA+AGG | - | chr3.1:46019542-46019561 | None:intergenic | 60.0% | |
| TCAGCTAGGTGAGCTGCCTG+TGG | - | chr3.1:46019308-46019327 | None:intergenic | 60.0% | |
| CTGATAGCAGCGCAGCTGCC+AGG | + | chr3.1:46019149-46019168 | MS.gene84530:intron | 65.0% | |
| GCTAGGTGAGCTGCCTGTGG+CGG | - | chr3.1:46019305-46019324 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 46018678 | 46019853 | 46018678 | ID=MS.gene84530 |
| chr3.1 | mRNA | 46018678 | 46019853 | 46018678 | ID=MS.gene84530.t1;Parent=MS.gene84530 |
| chr3.1 | exon | 46018678 | 46018810 | 46018678 | ID=MS.gene84530.t1.exon1;Parent=MS.gene84530.t1 |
| chr3.1 | CDS | 46018678 | 46018810 | 46018678 | ID=cds.MS.gene84530.t1;Parent=MS.gene84530.t1 |
| chr3.1 | exon | 46019156 | 46019853 | 46019156 | ID=MS.gene84530.t1.exon2;Parent=MS.gene84530.t1 |
| chr3.1 | CDS | 46019156 | 46019853 | 46019156 | ID=cds.MS.gene84530.t1;Parent=MS.gene84530.t1 |
| Gene Sequence |
| Protein sequence |
