Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84548.t1 | XP_003590850.2 | 74.5 | 658 | 98 | 4 | 1 | 597 | 1 | 649 | 1.00E-266 | 929.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84548.t1 | Q9LUZ4 | 48.8 | 606 | 253 | 20 | 21 | 592 | 2 | 584 | 5.8e-133 | 476.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84548.t1 | G7I4W5 | 74.5 | 658 | 98 | 4 | 1 | 597 | 1 | 649 | 7.5e-267 | 929.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene84548.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84548.t1 | MTR_1g075890 | 74.316 | 658 | 99 | 4 | 1 | 597 | 1 | 649 | 0.0 | 920 |
| MS.gene84548.t1 | MTR_3g464260 | 67.730 | 564 | 82 | 7 | 37 | 597 | 29 | 495 | 0.0 | 696 |
| MS.gene84548.t1 | MTR_3g464280 | 66.899 | 574 | 109 | 7 | 1 | 574 | 1 | 493 | 0.0 | 692 |
| MS.gene84548.t1 | MTR_5g071070 | 54.328 | 670 | 219 | 15 | 1 | 593 | 1 | 660 | 0.0 | 618 |
| MS.gene84548.t1 | MTR_5g071070 | 54.422 | 588 | 183 | 14 | 81 | 593 | 1 | 578 | 0.0 | 533 |
| MS.gene84548.t1 | MTR_5g082830 | 47.894 | 641 | 237 | 18 | 28 | 594 | 25 | 642 | 5.84e-176 | 514 |
| MS.gene84548.t1 | MTR_3g464290 | 57.562 | 443 | 137 | 11 | 168 | 592 | 42 | 451 | 3.43e-141 | 418 |
| MS.gene84548.t1 | MTR_7g092070 | 47.727 | 484 | 189 | 10 | 30 | 459 | 44 | 517 | 1.28e-138 | 421 |
| MS.gene84548.t1 | MTR_3g070880 | 43.373 | 581 | 209 | 18 | 31 | 593 | 8 | 486 | 3.61e-132 | 397 |
| MS.gene84548.t1 | MTR_3g029590 | 39.344 | 671 | 270 | 21 | 30 | 592 | 42 | 683 | 3.31e-127 | 391 |
| MS.gene84548.t1 | MTR_3g464270 | 54.068 | 381 | 133 | 8 | 220 | 590 | 8 | 356 | 3.43e-117 | 352 |
| MS.gene84548.t1 | MTR_1g050438 | 41.304 | 460 | 225 | 12 | 33 | 454 | 15 | 467 | 7.42e-102 | 321 |
| MS.gene84548.t1 | MTR_0728s0020 | 40.041 | 487 | 243 | 13 | 10 | 454 | 4 | 483 | 7.65e-102 | 322 |
| MS.gene84548.t1 | MTR_3g435590 | 46.537 | 361 | 174 | 5 | 30 | 372 | 29 | 388 | 2.70e-97 | 305 |
| MS.gene84548.t1 | MTR_3g435680 | 49.180 | 244 | 87 | 9 | 198 | 436 | 130 | 341 | 7.28e-69 | 228 |
| MS.gene84548.t1 | MTR_8g102100 | 54.268 | 164 | 69 | 1 | 217 | 374 | 77 | 240 | 1.45e-54 | 190 |
| MS.gene84548.t1 | MTR_6g090380 | 61.364 | 132 | 42 | 1 | 192 | 323 | 83 | 205 | 9.48e-54 | 187 |
| MS.gene84548.t1 | MTR_3g103960 | 61.194 | 134 | 50 | 2 | 211 | 342 | 43 | 176 | 3.99e-52 | 180 |
| MS.gene84548.t1 | MTR_2g090605 | 62.162 | 111 | 42 | 0 | 221 | 331 | 77 | 187 | 3.49e-48 | 174 |
| MS.gene84548.t1 | MTR_4g078660 | 57.944 | 107 | 45 | 0 | 217 | 323 | 56 | 162 | 6.10e-45 | 162 |
| MS.gene84548.t1 | MTR_1g081420 | 77.083 | 48 | 11 | 0 | 492 | 539 | 181 | 228 | 4.91e-15 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84548.t1 | AT5G58620 | 48.179 | 604 | 260 | 17 | 21 | 592 | 2 | 584 | 5.92e-169 | 494 |
| MS.gene84548.t1 | AT2G40140 | 45.320 | 609 | 262 | 14 | 1 | 592 | 1 | 555 | 6.35e-157 | 463 |
| MS.gene84548.t1 | AT2G40140 | 45.320 | 609 | 262 | 14 | 1 | 592 | 1 | 555 | 6.35e-157 | 463 |
| MS.gene84548.t1 | AT3G55980 | 46.103 | 603 | 270 | 17 | 1 | 598 | 1 | 553 | 1.49e-154 | 456 |
| MS.gene84548.t1 | AT3G55980 | 46.103 | 603 | 270 | 17 | 1 | 598 | 68 | 620 | 6.43e-154 | 457 |
| MS.gene84548.t1 | AT5G12850 | 41.158 | 622 | 260 | 20 | 25 | 557 | 34 | 638 | 1.57e-133 | 407 |
| MS.gene84548.t1 | AT2G41900 | 47.234 | 470 | 190 | 11 | 25 | 454 | 40 | 491 | 4.23e-131 | 400 |
| MS.gene84548.t1 | AT4G29190 | 46.465 | 198 | 80 | 4 | 210 | 396 | 68 | 250 | 1.96e-54 | 189 |
| MS.gene84548.t1 | AT2G19810 | 63.934 | 122 | 42 | 1 | 206 | 325 | 61 | 182 | 1.46e-52 | 184 |
| MS.gene84548.t1 | AT2G25900 | 59.848 | 132 | 53 | 0 | 214 | 345 | 83 | 214 | 2.36e-52 | 182 |
| MS.gene84548.t1 | AT2G25900 | 59.848 | 132 | 53 | 0 | 214 | 345 | 83 | 214 | 2.36e-52 | 182 |
| MS.gene84548.t1 | AT5G07500 | 61.157 | 121 | 47 | 0 | 203 | 323 | 34 | 154 | 1.83e-51 | 177 |
| MS.gene84548.t1 | AT1G03790 | 53.548 | 155 | 64 | 3 | 188 | 338 | 53 | 203 | 4.98e-49 | 176 |
| MS.gene84548.t1 | AT5G44260 | 59.375 | 128 | 47 | 2 | 199 | 325 | 42 | 165 | 8.99e-47 | 169 |
Find 143 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTTCATTGTGCCGTTTC+AGG | 0.147704 | 3.1:-46328635 | MS.gene84548:CDS |
| CTTATGGTTGCTGCCTTATT+TGG | 0.182687 | 3.1:-46328737 | MS.gene84548:CDS |
| GTGAATTAACCCAAGATTCT+TGG | 0.229479 | 3.1:+46327232 | None:intergenic |
| TTGTCAAACTAGTTTGATTA+AGG | 0.245776 | 3.1:-46328948 | MS.gene84548:CDS |
| GGTGTGTTATCTTATATTCT+TGG | 0.264718 | 3.1:-46328707 | MS.gene84548:CDS |
| TTGATTAAGGAAAATGAATA+TGG | 0.284568 | 3.1:-46328935 | MS.gene84548:CDS |
| CACACCCTTGCTTCCAAATA+AGG | 0.291991 | 3.1:+46328724 | None:intergenic |
| GCCTTCTACCTTCTCTAGTT+GGG | 0.294630 | 3.1:-46327403 | MS.gene84548:CDS |
| GTGTCCCTTGCCCCGAGTTT+AGG | 0.301559 | 3.1:-46328184 | MS.gene84548:CDS |
| CTTGTTGCTGCTCCACCATT+TGG | 0.306245 | 3.1:+46328423 | None:intergenic |
| TATATAGTACAGATGAATTT+AGG | 0.309340 | 3.1:-46328328 | MS.gene84548:CDS |
| CAAGGGCTTATTCTCATGAT+TGG | 0.318225 | 3.1:-46328277 | MS.gene84548:CDS |
| ATGAGAAAATCTTATTCTTT+CGG | 0.320268 | 3.1:-46327327 | MS.gene84548:CDS |
| GAAAGCCATTACATCATCTT+TGG | 0.329332 | 3.1:+46328862 | None:intergenic |
| CCATCTGCAGCATCATCGCC+TGG | 0.341132 | 3.1:-46327867 | MS.gene84548:CDS |
| GAACGCAAACCAGCAACTTT+GGG | 0.341182 | 3.1:-46327577 | MS.gene84548:CDS |
| AAAATGATTTCAAGGTTAGT+AGG | 0.361614 | 3.1:+46327642 | None:intergenic |
| TCTCCTTCAAATAATCTTGC+AGG | 0.362922 | 3.1:-46327672 | MS.gene84548:CDS |
| TTCTCGGCATCTGAAGGGTT+GGG | 0.369174 | 3.1:+46327799 | None:intergenic |
| AAGGATAGCCCCAAAGTTGC+TGG | 0.370536 | 3.1:+46327568 | None:intergenic |
| TATTGATCAAATTCTATTGT+TGG | 0.378855 | 3.1:+46327187 | None:intergenic |
| CCATCATTAGCTTCTGCATA+AGG | 0.378869 | 3.1:+46327715 | None:intergenic |
| AGCGAAGAAGCAAACCCTTC+TGG | 0.379520 | 3.1:+46328049 | None:intergenic |
| TTTGAAGTGCTAAGATTAGA+AGG | 0.387978 | 3.1:+46327549 | None:intergenic |
| TTATCTTATATTCTTGGAAC+CGG | 0.393431 | 3.1:-46328701 | MS.gene84548:CDS |
| AGAACGCAAACCAGCAACTT+TGG | 0.395931 | 3.1:-46327578 | MS.gene84548:CDS |
| TTCACCTAGCTCTTCTTCAA+TGG | 0.396489 | 3.1:-46327952 | MS.gene84548:CDS |
| TGAAGAGAGGACACCTCTTA+TGG | 0.399251 | 3.1:-46328753 | MS.gene84548:CDS |
| TGCCACATGGTTTCAGCCCC+AGG | 0.417694 | 3.1:+46327849 | None:intergenic |
| CCCTATCTGAGCCGCATGCT+CGG | 0.424060 | 3.1:+46328663 | None:intergenic |
| ATCTGTTTCTCGGCATCTGA+AGG | 0.426852 | 3.1:+46327793 | None:intergenic |
| CATCTGCAGCATCATCGCCT+GGG | 0.427567 | 3.1:-46327866 | MS.gene84548:CDS |
| CGAGTGTCCATTTGTTCACC+CGG | 0.428988 | 3.1:-46328252 | MS.gene84548:CDS |
| AGCCTTCTACCTTCTCTAGT+TGG | 0.429658 | 3.1:-46327404 | MS.gene84548:CDS |
| TCAAAGTGAAGCCTTGTTCA+AGG | 0.431149 | 3.1:-46328295 | MS.gene84548:CDS |
| TTTCTCGGCATCTGAAGGGT+TGG | 0.435722 | 3.1:+46327798 | None:intergenic |
| ACTCCTGCAAGATTATTTGA+AGG | 0.445487 | 3.1:+46327669 | None:intergenic |
| TTCAGCCAAAGATGATGTAA+TGG | 0.447315 | 3.1:-46328867 | MS.gene84548:CDS |
| GCAAACCCTTCTGGTGCATC+CGG | 0.454052 | 3.1:+46328058 | None:intergenic |
| CAGTTGATATGAACGGTAAC+CGG | 0.454347 | 3.1:-46328550 | MS.gene84548:CDS |
| TAATCTTTCTTCTCAGTTCG+AGG | 0.455693 | 3.1:+46328389 | None:intergenic |
| TTCTGCTACCTCAGTTGCCA+TGG | 0.458161 | 3.1:-46327427 | MS.gene84548:CDS |
| GAAATTAGGTTTCCAAATGG+TGG | 0.462188 | 3.1:-46328435 | MS.gene84548:CDS |
| CCCCAACTAGAGAAGGTAGA+AGG | 0.462869 | 3.1:+46327402 | None:intergenic |
| ACCGAGCATGCGGCTCAGAT+AGG | 0.467565 | 3.1:-46328664 | MS.gene84548:CDS |
| TGCTGCCTTATTTGGAAGCA+AGG | 0.473427 | 3.1:-46328729 | MS.gene84548:CDS |
| GAGGGTTGGCTCAAAGGAAA+TGG | 0.476478 | 3.1:-46328780 | MS.gene84548:CDS |
| AATAAGGCAGCAACCATAAG+AGG | 0.478339 | 3.1:+46328740 | None:intergenic |
| AGCAGCAGAACAACCTGAAA+CGG | 0.481598 | 3.1:+46328622 | None:intergenic |
| TGCTGCACTCAATAAAGCTC+TGG | 0.488427 | 3.1:+46327478 | None:intergenic |
| AGGCTTTGCAAGGATGGAAC+CGG | 0.489237 | 3.1:-46328077 | MS.gene84548:CDS |
| TTGGGTTAATTCACTTGTGA+AGG | 0.491764 | 3.1:-46327223 | MS.gene84548:CDS |
| GCATGACCCTTTCCTAAACT+CGG | 0.498529 | 3.1:+46328172 | None:intergenic |
| AGCCTTGTTCTGTATTGAGC+AGG | 0.498591 | 3.1:+46328095 | None:intergenic |
| TAAGAAATTAGGTTTCCAAA+TGG | 0.500813 | 3.1:-46328438 | MS.gene84548:CDS |
| AGGTGAAGGCAAAGCAGAAC+CGG | 0.502979 | 3.1:+46327989 | None:intergenic |
| TGAAACCATGTGGCAGACTC+AGG | 0.503210 | 3.1:-46327841 | MS.gene84548:CDS |
| TCGGTTAACATCGACGCAAC+CGG | 0.503338 | 3.1:+46328682 | None:intergenic |
| CCGAGCATGCGGCTCAGATA+GGG | 0.504187 | 3.1:-46328663 | MS.gene84548:CDS |
| ATTGAGTTCATCGCCTCGGA+TGG | 0.506436 | 3.1:+46327353 | None:intergenic |
| GCTCTGGCTACTGTTTGAAA+AGG | 0.507239 | 3.1:+46327494 | None:intergenic |
| GGGAAGAGGATACTACTTGA+AGG | 0.510141 | 3.1:-46328482 | MS.gene84548:CDS |
| AAATTCTATTGTTGGAGGCA+TGG | 0.510350 | 3.1:+46327195 | None:intergenic |
| AGACCGTTGTATGCTTCTAC+CGG | 0.510422 | 3.1:-46328008 | MS.gene84548:CDS |
| TGGAAGGAGGGTTGGCTCAA+AGG | 0.512027 | 3.1:-46328786 | MS.gene84548:CDS |
| AGAACAAGGCTTTGCAAGGA+TGG | 0.512168 | 3.1:-46328083 | MS.gene84548:CDS |
| TTGCTTGATGCATCTGCAGA+TGG | 0.513899 | 3.1:-46328578 | MS.gene84548:CDS |
| CCTTCTACCTTCTCTAGTTG+GGG | 0.514111 | 3.1:-46327402 | MS.gene84548:CDS |
| TACAACGGTCTAAGCTCCTC+TGG | 0.514271 | 3.1:+46328020 | None:intergenic |
| CAAAGTGAAGCCTTGTTCAA+GGG | 0.517860 | 3.1:-46328294 | MS.gene84548:CDS |
| ATGCAGCAGCCATTGTTGAA+TGG | 0.521801 | 3.1:+46327286 | None:intergenic |
| CCTTATGCAGAAGCTAATGA+TGG | 0.524433 | 3.1:-46327715 | MS.gene84548:CDS |
| TCAGGTAGGGATGGATCAAT+CGG | 0.525749 | 3.1:+46328365 | None:intergenic |
| TTATGGTATGGAAGGAGGGT+TGG | 0.526509 | 3.1:-46328794 | MS.gene84548:CDS |
| TGATCAAATTCTATTGTTGG+AGG | 0.527774 | 3.1:+46327190 | None:intergenic |
| TAGGGTTATGGTATGGAAGG+AGG | 0.528404 | 3.1:-46328799 | MS.gene84548:CDS |
| GTCATGTGCAACGGTGCCAA+TGG | 0.528443 | 3.1:-46328977 | MS.gene84548:CDS |
| CCAGGCGATGATGCTGCAGA+TGG | 0.530462 | 3.1:+46327867 | None:intergenic |
| TTTAAATATGATGTAGGTGA+AGG | 0.531636 | 3.1:+46327975 | None:intergenic |
| GGTGAATTTAAATATGATGT+AGG | 0.536115 | 3.1:+46327969 | None:intergenic |
| AGGGTTATGGTATGGAAGGA+GGG | 0.536148 | 3.1:-46328798 | MS.gene84548:CDS |
| CCTTGCCCCGAGTTTAGGAA+AGG | 0.536989 | 3.1:-46328179 | MS.gene84548:CDS |
| GATGCTGCAGATGGAGTCAA+AGG | 0.541033 | 3.1:+46327876 | None:intergenic |
| CCTTTCCTAAACTCGGGGCA+AGG | 0.541583 | 3.1:+46328179 | None:intergenic |
| GCTGCCTTATTTGGAAGCAA+GGG | 0.541989 | 3.1:-46328728 | MS.gene84548:CDS |
| AATGACATTTCCTCGGATCA+CGG | 0.554312 | 3.1:+46328213 | None:intergenic |
| ATGTTGATGAGGTAGGGTTA+TGG | 0.554961 | 3.1:-46328811 | MS.gene84548:CDS |
| ATGCTGCAGATGGAGTCAAA+GGG | 0.555965 | 3.1:+46327877 | None:intergenic |
| CATGACCCTTTCCTAAACTC+GGG | 0.556127 | 3.1:+46328173 | None:intergenic |
| CGGGTGAACAAATGGACACT+CGG | 0.558339 | 3.1:+46328253 | None:intergenic |
| ATCATGATGTTGATGAGGTA+GGG | 0.559323 | 3.1:-46328817 | MS.gene84548:CDS |
| GATCATGATGTTGATGAGGT+AGG | 0.562701 | 3.1:-46328818 | MS.gene84548:CDS |
| TCTGTTTCTCGGCATCTGAA+GGG | 0.564138 | 3.1:+46327794 | None:intergenic |
| CTTAGCACTTCAAATGCGAA+TGG | 0.565295 | 3.1:-46327540 | MS.gene84548:CDS |
| CATGTGTAATGACATTTCCT+CGG | 0.569855 | 3.1:+46328206 | None:intergenic |
| ATCTGCAGCATCATCGCCTG+GGG | 0.569999 | 3.1:-46327865 | MS.gene84548:CDS |
| GAATCCATTGAAGAAGAGCT+AGG | 0.570326 | 3.1:+46327948 | None:intergenic |
| TTGTTCTGCTGCTTCTGCTG+AGG | 0.573966 | 3.1:-46328612 | MS.gene84548:CDS |
| CTTCTTCGCTCACAAACCAG+AGG | 0.581502 | 3.1:-46328036 | MS.gene84548:CDS |
| ATGCAAGGCGCCGTGATCCG+AGG | 0.588507 | 3.1:-46328223 | MS.gene84548:CDS |
| CTTGCCCCGAGTTTAGGAAA+GGG | 0.591058 | 3.1:-46328178 | MS.gene84548:CDS |
| GTGGAGCAGCAACAAGATGT+AGG | 0.593275 | 3.1:-46328416 | MS.gene84548:CDS |
| CCCCTGATAGAAAATTAGAC+TGG | 0.596898 | 3.1:-46327377 | MS.gene84548:CDS |
| CTTTCCTAAACTCGGGGCAA+GGG | 0.597109 | 3.1:+46328180 | None:intergenic |
| AGGTAGGGTTATGGTATGGA+AGG | 0.598568 | 3.1:-46328802 | MS.gene84548:CDS |
| ATACAGAACAAGGCTTTGCA+AGG | 0.598747 | 3.1:-46328087 | MS.gene84548:CDS |
| GAGTGTCCATTTGTTCACCC+GGG | 0.599662 | 3.1:-46328251 | MS.gene84548:CDS |
| TGAGGTAGCAGAAGGAAGCT+CGG | 0.600234 | 3.1:+46327437 | None:intergenic |
| GAAGGGTTGGGACTGCAGCA+TGG | 0.601461 | 3.1:+46327811 | None:intergenic |
| AGACAATCAAGTCGCTACAC+CGG | 0.604044 | 3.1:+46328531 | None:intergenic |
| GATGAGGTAGGGTTATGGTA+TGG | 0.604921 | 3.1:-46328806 | MS.gene84548:CDS |
| ATGGAACCGGATGCACCAGA+AGG | 0.605474 | 3.1:-46328064 | MS.gene84548:CDS |
| AGGGGATCCCCAACTAGAGA+AGG | 0.607194 | 3.1:+46327395 | None:intergenic |
| AGAGAAGGTAGAAGGCTCCA+TGG | 0.619692 | 3.1:+46327410 | None:intergenic |
| GTGTAGCGACTTGATTGTCT+CGG | 0.619917 | 3.1:-46328528 | MS.gene84548:CDS |
| GGAAGAGGATACTACTTGAA+GGG | 0.620155 | 3.1:-46328481 | MS.gene84548:CDS |
| AGAAGGCTCCATGGCAACTG+AGG | 0.621343 | 3.1:+46327419 | None:intergenic |
| AGGAAATGGCATATGAAGAG+AGG | 0.622410 | 3.1:-46328766 | MS.gene84548:CDS |
| GCAGATTGTATCAAAGAAGA+CGG | 0.625127 | 3.1:+46327909 | None:intergenic |
| AGTGTCCATTTGTTCACCCG+GGG | 0.625388 | 3.1:-46328250 | MS.gene84548:CDS |
| TGAGAATAAGCCCTTGAACA+AGG | 0.627841 | 3.1:+46328284 | None:intergenic |
| AACGCAAACCAGCAACTTTG+GGG | 0.628398 | 3.1:-46327576 | MS.gene84548:CDS |
| CAGAAGTAGCCATTCAACAA+TGG | 0.630575 | 3.1:-46327295 | MS.gene84548:CDS |
| AAAATCAAAGTCATGTGCAA+CGG | 0.635454 | 3.1:-46328986 | None:intergenic |
| ATCCTGCTCAATACAGAACA+AGG | 0.635511 | 3.1:-46328097 | MS.gene84548:CDS |
| GGTAGTTCAGTTGATATGAA+CGG | 0.639398 | 3.1:-46328557 | MS.gene84548:CDS |
| ATGGCAACTGAGGTAGCAGA+AGG | 0.642309 | 3.1:+46327429 | None:intergenic |
| GTCGATGTTAACCGAGCATG+CGG | 0.642439 | 3.1:-46328674 | MS.gene84548:CDS |
| CTGAACCTGAGTCTGCCACA+TGG | 0.642947 | 3.1:+46327836 | None:intergenic |
| TGATACGACTGCATTGATGT+CGG | 0.644552 | 3.1:+46327600 | None:intergenic |
| TGGAACCGGATGCACCAGAA+GGG | 0.647933 | 3.1:-46328063 | MS.gene84548:CDS |
| TTAATCAAACTAGTTTGACA+AGG | 0.649059 | 3.1:+46328950 | None:intergenic |
| AAATTAGACTGGTCCATCCG+AGG | 0.656707 | 3.1:-46327366 | MS.gene84548:CDS |
| GAAAGGGTCATGCAGCAAAG+AGG | 0.658968 | 3.1:-46328162 | MS.gene84548:CDS |
| CGCCTGGGGCTGAAACCATG+TGG | 0.663037 | 3.1:-46327851 | MS.gene84548:CDS |
| ATATGATCATGATGTTGATG+AGG | 0.673679 | 3.1:-46328822 | MS.gene84548:CDS |
| ATGACCCTTTCCTAAACTCG+GGG | 0.680139 | 3.1:+46328174 | None:intergenic |
| AAGGCATCAACTCTGAATTG+TGG | 0.688208 | 3.1:+46327513 | None:intergenic |
| GTGTCCATTTGTTCACCCGG+GGG | 0.714093 | 3.1:-46328249 | MS.gene84548:CDS |
| GCTGCAGATGGAGTCAAAGG+GGG | 0.734632 | 3.1:+46327879 | None:intergenic |
| TGCTGCAGATGGAGTCAAAG+GGG | 0.744498 | 3.1:+46327878 | None:intergenic |
| GATGCTTGTGAATATGCACA+TGG | 0.757069 | 3.1:-46328140 | MS.gene84548:CDS |
| GAACCGGTAGAAGCATACAA+CGG | 0.767371 | 3.1:+46328005 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAGAAAATCTTATTCTTT+CGG | - | chr3.1:46328847-46328866 | MS.gene84548:CDS | 20.0% |
| !! | TATATAGTACAGATGAATTT+AGG | - | chr3.1:46327846-46327865 | MS.gene84548:CDS | 20.0% |
| !! | TTGATTAAGGAAAATGAATA+TGG | - | chr3.1:46327239-46327258 | MS.gene84548:CDS | 20.0% |
| ! | AAAATGATTTCAAGGTTAGT+AGG | + | chr3.1:46328535-46328554 | None:intergenic | 25.0% |
| ! | GGTGAATTTAAATATGATGT+AGG | + | chr3.1:46328208-46328227 | None:intergenic | 25.0% |
| ! | TAAGAAATTAGGTTTCCAAA+TGG | - | chr3.1:46327736-46327755 | MS.gene84548:CDS | 25.0% |
| ! | TTATCTTATATTCTTGGAAC+CGG | - | chr3.1:46327473-46327492 | MS.gene84548:CDS | 25.0% |
| ! | TTTAAATATGATGTAGGTGA+AGG | + | chr3.1:46328202-46328221 | None:intergenic | 25.0% |
| !! | ACTAACCTTGAAATCATTTT+TGG | - | chr3.1:46328535-46328554 | MS.gene84548:CDS | 25.0% |
| !! | GACGATTTTCTTAAGAAATT+AGG | - | chr3.1:46327725-46327744 | MS.gene84548:CDS | 25.0% |
| !! | TTAATCAAACTAGTTTGACA+AGG | + | chr3.1:46327227-46327246 | None:intergenic | 25.0% |
| !! | TTGTCAAACTAGTTTGATTA+AGG | - | chr3.1:46327226-46327245 | MS.gene84548:CDS | 25.0% |
| !!! | CTAACCTTGAAATCATTTTT+GGG | - | chr3.1:46328536-46328555 | MS.gene84548:CDS | 25.0% |
| !!! | TTTTTTAAGCCAAGAATCTT+GGG | - | chr3.1:46328933-46328952 | MS.gene84548:CDS | 25.0% |
| !!! | TTTTTTTAAGCCAAGAATCT+TGG | - | chr3.1:46328932-46328951 | MS.gene84548:CDS | 25.0% |
| ATATGATCATGATGTTGATG+AGG | - | chr3.1:46327352-46327371 | MS.gene84548:CDS | 30.0% | |
| ATGACCCAAAAATGATTTCA+AGG | + | chr3.1:46328543-46328562 | None:intergenic | 30.0% | |
| GGTGTGTTATCTTATATTCT+TGG | - | chr3.1:46327467-46327486 | MS.gene84548:CDS | 30.0% | |
| ! | ACCAGTCTAATTTTCTATCA+GGG | + | chr3.1:46328801-46328820 | None:intergenic | 30.0% |
| ! | CTAATAGTATTTTCGGTTCA+GGG | - | chr3.1:46327672-46327691 | MS.gene84548:CDS | 30.0% |
| ! | TATATCCCAGTTTTTATGTC+AGG | + | chr3.1:46327830-46327849 | None:intergenic | 30.0% |
| ! | TCGGCTTCTAATAGTATTTT+CGG | - | chr3.1:46327665-46327684 | MS.gene84548:CDS | 30.0% |
| ! | TCTAATAGTATTTTCGGTTC+AGG | - | chr3.1:46327671-46327690 | MS.gene84548:CDS | 30.0% |
| ! | TTTGAAGTGCTAAGATTAGA+AGG | + | chr3.1:46328628-46328647 | None:intergenic | 30.0% |
| ACTCCTGCAAGATTATTTGA+AGG | + | chr3.1:46328508-46328527 | None:intergenic | 35.0% | |
| CATGTGTAATGACATTTCCT+CGG | + | chr3.1:46327971-46327990 | None:intergenic | 35.0% | |
| GAAAGCCATTACATCATCTT+TGG | + | chr3.1:46327315-46327334 | None:intergenic | 35.0% | |
| GAAATTAGGTTTCCAAATGG+TGG | - | chr3.1:46327739-46327758 | MS.gene84548:CDS | 35.0% | |
| GCAGATTGTATCAAAGAAGA+CGG | + | chr3.1:46328268-46328287 | None:intergenic | 35.0% | |
| GTGAATTAACCCAAGATTCT+TGG | + | chr3.1:46328945-46328964 | None:intergenic | 35.0% | |
| TAATCTTTCTTCTCAGTTCG+AGG | + | chr3.1:46327788-46327807 | None:intergenic | 35.0% | |
| TCTCCTTCAAATAATCTTGC+AGG | - | chr3.1:46328502-46328521 | MS.gene84548:CDS | 35.0% | |
| TTCAGCCAAAGATGATGTAA+TGG | - | chr3.1:46327307-46327326 | MS.gene84548:CDS | 35.0% | |
| TTGGGTTAATTCACTTGTGA+AGG | - | chr3.1:46328951-46328970 | MS.gene84548:CDS | 35.0% | |
| ! | AGTTTGACAAGGTTTTCCAT+TGG | + | chr3.1:46327216-46327235 | None:intergenic | 35.0% |
| ! | ATCATGATGTTGATGAGGTA+GGG | - | chr3.1:46327357-46327376 | MS.gene84548:CDS | 35.0% |
| ! | CCAGTCTAATTTTCTATCAG+GGG | + | chr3.1:46328800-46328819 | None:intergenic | 35.0% |
| ! | GACCAGTCTAATTTTCTATC+AGG | + | chr3.1:46328802-46328821 | None:intergenic | 35.0% |
| ! | GGTAGTTCAGTTGATATGAA+CGG | - | chr3.1:46327617-46327636 | MS.gene84548:CDS | 35.0% |
| ! | TTTTATTGAGTTCATCGCCT+CGG | + | chr3.1:46328828-46328847 | None:intergenic | 35.0% |
| !! | CACATGGTATTTTTGAATGC+TGG | - | chr3.1:46328050-46328069 | MS.gene84548:CDS | 35.0% |
| !! | GCAGTTTTCAATCTGTTTCT+CGG | + | chr3.1:46328394-46328413 | None:intergenic | 35.0% |
| AATAAGGCAGCAACCATAAG+AGG | + | chr3.1:46327437-46327456 | None:intergenic | 40.0% | |
| AATGACATTTCCTCGGATCA+CGG | + | chr3.1:46327964-46327983 | None:intergenic | 40.0% | |
| AGGAAATGGCATATGAAGAG+AGG | - | chr3.1:46327408-46327427 | MS.gene84548:CDS | 40.0% | |
| ATACAGAACAAGGCTTTGCA+AGG | - | chr3.1:46328087-46328106 | MS.gene84548:CDS | 40.0% | |
| ATCCTGCTCAATACAGAACA+AGG | - | chr3.1:46328077-46328096 | MS.gene84548:CDS | 40.0% | |
| CAAGGGCTTATTCTCATGAT+TGG | - | chr3.1:46327897-46327916 | MS.gene84548:CDS | 40.0% | |
| CAGAAGTAGCCATTCAACAA+TGG | - | chr3.1:46328879-46328898 | MS.gene84548:CDS | 40.0% | |
| CCCCTGATAGAAAATTAGAC+TGG | - | chr3.1:46328797-46328816 | MS.gene84548:CDS | 40.0% | |
| CCCTACCTGACATAAAAACT+GGG | - | chr3.1:46327822-46327841 | MS.gene84548:CDS | 40.0% | |
| CCTTATGCAGAAGCTAATGA+TGG | - | chr3.1:46328459-46328478 | MS.gene84548:CDS | 40.0% | |
| CTTAGCACTTCAAATGCGAA+TGG | - | chr3.1:46328634-46328653 | MS.gene84548:CDS | 40.0% | |
| GAATCCATTGAAGAAGAGCT+AGG | + | chr3.1:46328229-46328248 | None:intergenic | 40.0% | |
| GATGCTTGTGAATATGCACA+TGG | - | chr3.1:46328034-46328053 | MS.gene84548:CDS | 40.0% | |
| GGAAGAGGATACTACTTGAA+GGG | - | chr3.1:46327693-46327712 | MS.gene84548:CDS | 40.0% | |
| TCCCTACCTGACATAAAAAC+TGG | - | chr3.1:46327821-46327840 | MS.gene84548:CDS | 40.0% | |
| TGAGAATAAGCCCTTGAACA+AGG | + | chr3.1:46327893-46327912 | None:intergenic | 40.0% | |
| ! | AAGGCATCAACTCTGAATTG+TGG | + | chr3.1:46328664-46328683 | None:intergenic | 40.0% |
| ! | ATGTTGATGAGGTAGGGTTA+TGG | - | chr3.1:46327363-46327382 | MS.gene84548:CDS | 40.0% |
| ! | CAGTTGATATGAACGGTAAC+CGG | - | chr3.1:46327624-46327643 | MS.gene84548:CDS | 40.0% |
| ! | CCATCATTAGCTTCTGCATA+AGG | + | chr3.1:46328462-46328481 | None:intergenic | 40.0% |
| ! | CCCAGTTTTTATGTCAGGTA+GGG | + | chr3.1:46327825-46327844 | None:intergenic | 40.0% |
| ! | CTTATGGTTGCTGCCTTATT+TGG | - | chr3.1:46327437-46327456 | MS.gene84548:CDS | 40.0% |
| ! | GATCATGATGTTGATGAGGT+AGG | - | chr3.1:46327356-46327375 | MS.gene84548:CDS | 40.0% |
| ! | GTTTTTATGTCAGGTAGGGA+TGG | + | chr3.1:46327821-46327840 | None:intergenic | 40.0% |
| ! | TCCCAGTTTTTATGTCAGGT+AGG | + | chr3.1:46327826-46327845 | None:intergenic | 40.0% |
| ! | TGATACGACTGCATTGATGT+CGG | + | chr3.1:46328577-46328596 | None:intergenic | 40.0% |
| ! | TTCACCTAGCTCTTCTTCAA+TGG | - | chr3.1:46328222-46328241 | MS.gene84548:CDS | 40.0% |
| !! | CAAAGTGAAGCCTTGTTCAA+GGG | - | chr3.1:46327880-46327899 | MS.gene84548:CDS | 40.0% |
| !! | TCAAAGTGAAGCCTTGTTCA+AGG | - | chr3.1:46327879-46327898 | MS.gene84548:CDS | 40.0% |
| AACGCAAACCAGCAACTTTG+GGG | - | chr3.1:46328598-46328617 | MS.gene84548:CDS | 45.0% | |
| AGAACAAGGCTTTGCAAGGA+TGG | - | chr3.1:46328091-46328110 | MS.gene84548:CDS | 45.0% | |
| AGAACGCAAACCAGCAACTT+TGG | - | chr3.1:46328596-46328615 | MS.gene84548:CDS | 45.0% | |
| AGACAATCAAGTCGCTACAC+CGG | + | chr3.1:46327646-46327665 | None:intergenic | 45.0% | |
| AGACCGTTGTATGCTTCTAC+CGG | - | chr3.1:46328166-46328185 | MS.gene84548:CDS | 45.0% | |
| AGCAGCAGAACAACCTGAAA+CGG | + | chr3.1:46327555-46327574 | None:intergenic | 45.0% | |
| AGCCTTCTACCTTCTCTAGT+TGG | - | chr3.1:46328770-46328789 | MS.gene84548:CDS | 45.0% | |
| AGGGTTATGGTATGGAAGGA+GGG | - | chr3.1:46327376-46327395 | MS.gene84548:CDS | 45.0% | |
| AGGTAGGGTTATGGTATGGA+AGG | - | chr3.1:46327372-46327391 | MS.gene84548:CDS | 45.0% | |
| ATGACCCTTTCCTAAACTCG+GGG | + | chr3.1:46328003-46328022 | None:intergenic | 45.0% | |
| ATGCAGCAGCCATTGTTGAA+TGG | + | chr3.1:46328891-46328910 | None:intergenic | 45.0% | |
| ATGCTGCAGATGGAGTCAAA+GGG | + | chr3.1:46328300-46328319 | None:intergenic | 45.0% | |
| CACACCCTTGCTTCCAAATA+AGG | + | chr3.1:46327453-46327472 | None:intergenic | 45.0% | |
| CATGACCCTTTCCTAAACTC+GGG | + | chr3.1:46328004-46328023 | None:intergenic | 45.0% | |
| CCTTCTACCTTCTCTAGTTG+GGG | - | chr3.1:46328772-46328791 | MS.gene84548:CDS | 45.0% | |
| GAACGCAAACCAGCAACTTT+GGG | - | chr3.1:46328597-46328616 | MS.gene84548:CDS | 45.0% | |
| GATGAGGTAGGGTTATGGTA+TGG | - | chr3.1:46327368-46327387 | MS.gene84548:CDS | 45.0% | |
| GCATGACCCTTTCCTAAACT+CGG | + | chr3.1:46328005-46328024 | None:intergenic | 45.0% | |
| GCCTTCTACCTTCTCTAGTT+GGG | - | chr3.1:46328771-46328790 | MS.gene84548:CDS | 45.0% | |
| GCTCTGGCTACTGTTTGAAA+AGG | + | chr3.1:46328683-46328702 | None:intergenic | 45.0% | |
| GGGAAGAGGATACTACTTGA+AGG | - | chr3.1:46327692-46327711 | MS.gene84548:CDS | 45.0% | |
| GTGTAGCGACTTGATTGTCT+CGG | - | chr3.1:46327646-46327665 | MS.gene84548:CDS | 45.0% | |
| TAGGGTTATGGTATGGAAGG+AGG | - | chr3.1:46327375-46327394 | MS.gene84548:CDS | 45.0% | |
| TCAGGTAGGGATGGATCAAT+CGG | + | chr3.1:46327812-46327831 | None:intergenic | 45.0% | |
| TGAAGAGAGGACACCTCTTA+TGG | - | chr3.1:46327421-46327440 | MS.gene84548:CDS | 45.0% | |
| TGCTGCACTCAATAAAGCTC+TGG | + | chr3.1:46328699-46328718 | None:intergenic | 45.0% | |
| TTATGGTATGGAAGGAGGGT+TGG | - | chr3.1:46327380-46327399 | MS.gene84548:CDS | 45.0% | |
| TTGCTTGATGCATCTGCAGA+TGG | - | chr3.1:46327596-46327615 | MS.gene84548:CDS | 45.0% | |
| ! | AAATTAGACTGGTCCATCCG+AGG | - | chr3.1:46328808-46328827 | MS.gene84548:CDS | 45.0% |
| ! | ATCTGTTTCTCGGCATCTGA+AGG | + | chr3.1:46328384-46328403 | None:intergenic | 45.0% |
| ! | GAACCGGTAGAAGCATACAA+CGG | + | chr3.1:46328172-46328191 | None:intergenic | 45.0% |
| ! | GTATTTTCGGTTCAGGGAAG+AGG | - | chr3.1:46327678-46327697 | MS.gene84548:CDS | 45.0% |
| ! | TCTGTTTCTCGGCATCTGAA+GGG | + | chr3.1:46328383-46328402 | None:intergenic | 45.0% |
| !! | AGCCTTGTTCTGTATTGAGC+AGG | + | chr3.1:46328082-46328101 | None:intergenic | 45.0% |
| !! | GCTGCCTTATTTGGAAGCAA+GGG | - | chr3.1:46327446-46327465 | MS.gene84548:CDS | 45.0% |
| !! | TGCTGCCTTATTTGGAAGCA+AGG | - | chr3.1:46327445-46327464 | MS.gene84548:CDS | 45.0% |
| AAGGATAGCCCCAAAGTTGC+TGG | + | chr3.1:46328609-46328628 | None:intergenic | 50.0% | |
| AGAGAAGGTAGAAGGCTCCA+TGG | + | chr3.1:46328767-46328786 | None:intergenic | 50.0% | |
| AGCGAAGAAGCAAACCCTTC+TGG | + | chr3.1:46328128-46328147 | None:intergenic | 50.0% | |
| AGGCTTTGCAAGGATGGAAC+CGG | - | chr3.1:46328097-46328116 | MS.gene84548:CDS | 50.0% | |
| AGGTGAAGGCAAAGCAGAAC+CGG | + | chr3.1:46328188-46328207 | None:intergenic | 50.0% | |
| AGTGTCCATTTGTTCACCCG+GGG | - | chr3.1:46327924-46327943 | MS.gene84548:CDS | 50.0% | |
| ATGGCAACTGAGGTAGCAGA+AGG | + | chr3.1:46328748-46328767 | None:intergenic | 50.0% | |
| ATTGAGTTCATCGCCTCGGA+TGG | + | chr3.1:46328824-46328843 | None:intergenic | 50.0% | |
| CCCCAACTAGAGAAGGTAGA+AGG | + | chr3.1:46328775-46328794 | None:intergenic | 50.0% | |
| CGAGTGTCCATTTGTTCACC+CGG | - | chr3.1:46327922-46327941 | MS.gene84548:CDS | 50.0% | |
| CGGGTGAACAAATGGACACT+CGG | + | chr3.1:46327924-46327943 | None:intergenic | 50.0% | |
| CTTCTTCGCTCACAAACCAG+AGG | - | chr3.1:46328138-46328157 | MS.gene84548:CDS | 50.0% | |
| CTTGCCCCGAGTTTAGGAAA+GGG | - | chr3.1:46327996-46328015 | MS.gene84548:CDS | 50.0% | |
| CTTGTTGCTGCTCCACCATT+TGG | + | chr3.1:46327754-46327773 | None:intergenic | 50.0% | |
| CTTTCCTAAACTCGGGGCAA+GGG | + | chr3.1:46327997-46328016 | None:intergenic | 50.0% | |
| GAAAGGGTCATGCAGCAAAG+AGG | - | chr3.1:46328012-46328031 | MS.gene84548:CDS | 50.0% | |
| GAGTGTCCATTTGTTCACCC+GGG | - | chr3.1:46327923-46327942 | MS.gene84548:CDS | 50.0% | |
| GATGCTGCAGATGGAGTCAA+AGG | + | chr3.1:46328301-46328320 | None:intergenic | 50.0% | |
| GTCGATGTTAACCGAGCATG+CGG | - | chr3.1:46327500-46327519 | MS.gene84548:CDS | 50.0% | |
| GTGGAGCAGCAACAAGATGT+AGG | - | chr3.1:46327758-46327777 | MS.gene84548:CDS | 50.0% | |
| TACAACGGTCTAAGCTCCTC+TGG | + | chr3.1:46328157-46328176 | None:intergenic | 50.0% | |
| TCGGTTAACATCGACGCAAC+CGG | + | chr3.1:46327495-46327514 | None:intergenic | 50.0% | |
| TGAAACCATGTGGCAGACTC+AGG | - | chr3.1:46328333-46328352 | MS.gene84548:CDS | 50.0% | |
| TGAGGTAGCAGAAGGAAGCT+CGG | + | chr3.1:46328740-46328759 | None:intergenic | 50.0% | |
| TGCTGCAGATGGAGTCAAAG+GGG | + | chr3.1:46328299-46328318 | None:intergenic | 50.0% | |
| TTCTCGGCATCTGAAGGGTT+GGG | + | chr3.1:46328378-46328397 | None:intergenic | 50.0% | |
| TTCTGCTACCTCAGTTGCCA+TGG | - | chr3.1:46328747-46328766 | MS.gene84548:CDS | 50.0% | |
| TTTCTCGGCATCTGAAGGGT+TGG | + | chr3.1:46328379-46328398 | None:intergenic | 50.0% | |
| ! | TTGTTCTGCTGCTTCTGCTG+AGG | - | chr3.1:46327562-46327581 | MS.gene84548:CDS | 50.0% |
| ! | TTTTCCCCCGGGTGAACAAA+TGG | + | chr3.1:46327932-46327951 | None:intergenic | 50.0% |
| !! | GAGGGTTGGCTCAAAGGAAA+TGG | - | chr3.1:46327394-46327413 | MS.gene84548:CDS | 50.0% |
| !! | GCTCTTCATTGTGCCGTTTC+AGG | - | chr3.1:46327539-46327558 | MS.gene84548:CDS | 50.0% |
| AGAAGGCTCCATGGCAACTG+AGG | + | chr3.1:46328758-46328777 | None:intergenic | 55.0% | |
| AGGGGATCCCCAACTAGAGA+AGG | + | chr3.1:46328782-46328801 | None:intergenic | 55.0% | |
| ATCTGCAGCATCATCGCCTG+GGG | - | chr3.1:46328309-46328328 | MS.gene84548:CDS | 55.0% | |
| ATGGAACCGGATGCACCAGA+AGG | - | chr3.1:46328110-46328129 | MS.gene84548:CDS | 55.0% | |
| CATCTGCAGCATCATCGCCT+GGG | - | chr3.1:46328308-46328327 | MS.gene84548:CDS | 55.0% | |
| CCTTGCCCCGAGTTTAGGAA+AGG | - | chr3.1:46327995-46328014 | MS.gene84548:CDS | 55.0% | |
| CCTTTCCTAAACTCGGGGCA+AGG | + | chr3.1:46327998-46328017 | None:intergenic | 55.0% | |
| CTGAACCTGAGTCTGCCACA+TGG | + | chr3.1:46328341-46328360 | None:intergenic | 55.0% | |
| GCAAACCCTTCTGGTGCATC+CGG | + | chr3.1:46328119-46328138 | None:intergenic | 55.0% | |
| GCTGCAGATGGAGTCAAAGG+GGG | + | chr3.1:46328298-46328317 | None:intergenic | 55.0% | |
| GTGTCCATTTGTTCACCCGG+GGG | - | chr3.1:46327925-46327944 | MS.gene84548:CDS | 55.0% | |
| TGGAACCGGATGCACCAGAA+GGG | - | chr3.1:46328111-46328130 | MS.gene84548:CDS | 55.0% | |
| TTCACCCGGGGGAAAATGCA+AGG | - | chr3.1:46327936-46327955 | MS.gene84548:CDS | 55.0% | |
| ! | GATGGAGTCAAAGGGGGTGT+CGG | + | chr3.1:46328292-46328311 | None:intergenic | 55.0% |
| !! | TGGAAGGAGGGTTGGCTCAA+AGG | - | chr3.1:46327388-46327407 | MS.gene84548:CDS | 55.0% |
| ACCGAGCATGCGGCTCAGAT+AGG | - | chr3.1:46327510-46327529 | MS.gene84548:CDS | 60.0% | |
| CCAGGCGATGATGCTGCAGA+TGG | + | chr3.1:46328310-46328329 | None:intergenic | 60.0% | |
| CCATCTGCAGCATCATCGCC+TGG | - | chr3.1:46328307-46328326 | MS.gene84548:CDS | 60.0% | |
| CCCTATCTGAGCCGCATGCT+CGG | + | chr3.1:46327514-46327533 | None:intergenic | 60.0% | |
| CCGAGCATGCGGCTCAGATA+GGG | - | chr3.1:46327511-46327530 | MS.gene84548:CDS | 60.0% | |
| GAAGGGTTGGGACTGCAGCA+TGG | + | chr3.1:46328366-46328385 | None:intergenic | 60.0% | |
| GTGTCCCTTGCCCCGAGTTT+AGG | - | chr3.1:46327990-46328009 | MS.gene84548:CDS | 60.0% | |
| TGCCACATGGTTTCAGCCCC+AGG | + | chr3.1:46328328-46328347 | None:intergenic | 60.0% | |
| CGCCTGGGGCTGAAACCATG+TGG | - | chr3.1:46328323-46328342 | MS.gene84548:CDS | 65.0% | |
| ! | CGGCGCCTTGCATTTTCCCC+CGG | + | chr3.1:46327944-46327963 | None:intergenic | 65.0% |
| ! | GGCGCCTTGCATTTTCCCCC+GGG | + | chr3.1:46327943-46327962 | None:intergenic | 65.0% |
| !! | ATGCAAGGCGCCGTGATCCG+AGG | - | chr3.1:46327951-46327970 | MS.gene84548:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 46327200 | 46328996 | 46327200 | ID=MS.gene84548 |
| chr3.1 | mRNA | 46327200 | 46328996 | 46327200 | ID=MS.gene84548.t1;Parent=MS.gene84548 |
| chr3.1 | exon | 46327200 | 46328996 | 46327200 | ID=MS.gene84548.t1.exon1;Parent=MS.gene84548.t1 |
| chr3.1 | CDS | 46327200 | 46328996 | 46327200 | ID=cds.MS.gene84548.t1;Parent=MS.gene84548.t1 |
| Gene Sequence |
| Protein sequence |
