Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84852.t1 | RHN72439.1 | 41.5 | 677 | 175 | 2 | 165 | 620 | 58 | 734 | 4.90E-141 | 512.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84852.t1 | Q9SZL8 | 37.2 | 183 | 111 | 4 | 186 | 366 | 77 | 257 | 1.6e-20 | 103.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84852.t1 | A0A396J342 | 41.5 | 677 | 175 | 2 | 165 | 620 | 58 | 734 | 3.5e-141 | 512.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene84852.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84852.t1 | MTR_7g028855 | 65.337 | 326 | 49 | 5 | 1 | 325 | 1 | 263 | 3.91e-125 | 388 |
MS.gene84852.t1 | MTR_7g446520 | 62.739 | 314 | 46 | 4 | 56 | 369 | 15 | 257 | 1.29e-118 | 366 |
MS.gene84852.t1 | MTR_7g446480 | 49.593 | 369 | 67 | 8 | 1 | 369 | 1 | 250 | 5.54e-95 | 303 |
MS.gene84852.t1 | MTR_7g446510 | 86.486 | 111 | 15 | 0 | 259 | 369 | 155 | 265 | 1.31e-59 | 207 |
MS.gene84852.t1 | MTR_7g446510 | 55.422 | 166 | 43 | 3 | 378 | 543 | 23 | 157 | 3.09e-43 | 160 |
MS.gene84852.t1 | MTR_1g070355 | 35.000 | 200 | 127 | 2 | 184 | 382 | 76 | 273 | 5.63e-30 | 126 |
MS.gene84852.t1 | MTR_5g076070 | 32.828 | 198 | 130 | 1 | 147 | 344 | 21 | 215 | 3.35e-27 | 112 |
MS.gene84852.t1 | MTR_8g467420 | 48.193 | 83 | 42 | 1 | 165 | 246 | 61 | 143 | 3.08e-20 | 89.4 |
MS.gene84852.t1 | MTR_0645s0010 | 36.364 | 121 | 77 | 0 | 344 | 464 | 5 | 125 | 1.30e-17 | 80.5 |
MS.gene84852.t1 | MTR_8g468460 | 46.939 | 98 | 50 | 2 | 381 | 477 | 9 | 105 | 1.80e-17 | 79.3 |
MS.gene84852.t1 | MTR_6g022080 | 25.581 | 172 | 128 | 0 | 173 | 344 | 76 | 247 | 2.35e-17 | 83.2 |
MS.gene84852.t1 | MTR_0402s0040 | 30.196 | 255 | 152 | 7 | 186 | 425 | 30 | 273 | 1.71e-16 | 84.0 |
MS.gene84852.t1 | MTR_6g051425 | 27.854 | 219 | 143 | 6 | 190 | 400 | 25 | 236 | 6.64e-16 | 80.9 |
MS.gene84852.t1 | MTR_6g053140 | 31.056 | 161 | 97 | 4 | 117 | 275 | 41 | 189 | 3.01e-13 | 70.5 |
MS.gene84852.t1 | MTR_4g035820 | 31.401 | 207 | 129 | 7 | 188 | 386 | 81 | 282 | 6.69e-13 | 73.2 |
MS.gene84852.t1 | MTR_3g448650 | 40.000 | 85 | 51 | 0 | 173 | 257 | 73 | 157 | 6.79e-13 | 68.6 |
MS.gene84852.t1 | MTR_0060s0090 | 36.250 | 80 | 51 | 0 | 185 | 264 | 59 | 138 | 9.18e-13 | 67.4 |
MS.gene84852.t1 | MTR_2g098880 | 36.752 | 117 | 72 | 2 | 176 | 291 | 55 | 170 | 5.11e-12 | 67.4 |
MS.gene84852.t1 | MTR_2g098880 | 36.752 | 117 | 72 | 2 | 176 | 291 | 67 | 182 | 7.84e-12 | 67.4 |
MS.gene84852.t1 | MTR_3g080590 | 48.276 | 58 | 30 | 0 | 175 | 232 | 98 | 155 | 2.10e-11 | 63.5 |
MS.gene84852.t1 | MTR_2g101460 | 36.937 | 111 | 70 | 0 | 173 | 283 | 36 | 146 | 2.18e-11 | 64.7 |
MS.gene84852.t1 | MTR_2g101460 | 36.937 | 111 | 70 | 0 | 173 | 283 | 46 | 156 | 6.44e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84852.t1 | AT4G38180 | 37.158 | 183 | 111 | 4 | 186 | 366 | 77 | 257 | 3.05e-18 | 90.5 |
MS.gene84852.t1 | AT4G38180 | 28.856 | 201 | 135 | 5 | 365 | 562 | 483 | 678 | 1.26e-15 | 82.4 |
MS.gene84852.t1 | AT1G10240 | 32.105 | 190 | 109 | 5 | 188 | 358 | 54 | 242 | 7.36e-15 | 79.7 |
MS.gene84852.t1 | AT1G10240 | 32.105 | 190 | 109 | 5 | 188 | 358 | 54 | 242 | 7.36e-15 | 79.7 |
MS.gene84852.t1 | AT3G07500 | 38.235 | 136 | 74 | 5 | 155 | 287 | 8 | 136 | 9.18e-13 | 68.9 |
MS.gene84852.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 188 | 345 | 61 | 220 | 2.36e-12 | 71.2 |
MS.gene84852.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 188 | 345 | 61 | 220 | 2.46e-12 | 71.2 |
MS.gene84852.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 188 | 345 | 61 | 220 | 2.95e-12 | 71.2 |
MS.gene84852.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 188 | 345 | 61 | 220 | 3.09e-12 | 71.2 |
MS.gene84852.t1 | AT5G28530 | 29.193 | 161 | 110 | 3 | 188 | 345 | 61 | 220 | 3.09e-12 | 71.2 |
MS.gene84852.t1 | AT3G22170 | 25.424 | 177 | 127 | 2 | 368 | 544 | 469 | 640 | 3.55e-12 | 71.2 |
MS.gene84852.t1 | AT3G22170 | 25.424 | 177 | 127 | 2 | 368 | 544 | 469 | 640 | 3.55e-12 | 71.2 |
MS.gene84852.t1 | AT4G38170 | 28.966 | 145 | 99 | 3 | 377 | 519 | 258 | 400 | 5.52e-12 | 70.1 |
MS.gene84852.t1 | AT2G27110 | 25.962 | 208 | 138 | 5 | 345 | 544 | 405 | 604 | 1.36e-11 | 69.3 |
MS.gene84852.t1 | AT2G27110 | 25.962 | 208 | 138 | 5 | 345 | 544 | 405 | 604 | 1.36e-11 | 69.3 |
MS.gene84852.t1 | AT4G19990 | 27.485 | 171 | 120 | 4 | 350 | 518 | 391 | 559 | 1.77e-11 | 68.9 |
MS.gene84852.t1 | AT4G19990 | 27.485 | 171 | 120 | 4 | 350 | 518 | 391 | 559 | 1.77e-11 | 68.9 |
MS.gene84852.t1 | AT2G27110 | 25.962 | 208 | 138 | 5 | 345 | 544 | 260 | 459 | 2.82e-11 | 68.2 |
MS.gene84852.t1 | AT4G19990 | 27.485 | 171 | 120 | 4 | 350 | 518 | 334 | 502 | 3.23e-11 | 67.8 |
MS.gene84852.t1 | AT4G19990 | 27.485 | 171 | 120 | 4 | 350 | 518 | 391 | 559 | 3.56e-11 | 67.8 |
MS.gene84852.t1 | AT4G19990 | 27.485 | 171 | 120 | 4 | 350 | 518 | 391 | 559 | 3.56e-11 | 67.8 |
MS.gene84852.t1 | AT4G19990 | 27.485 | 171 | 120 | 4 | 350 | 518 | 391 | 559 | 3.65e-11 | 67.8 |
MS.gene84852.t1 | AT4G19990 | 27.485 | 171 | 120 | 4 | 350 | 518 | 405 | 573 | 3.96e-11 | 67.8 |
MS.gene84852.t1 | AT4G15090 | 25.806 | 186 | 134 | 2 | 368 | 553 | 460 | 641 | 4.45e-11 | 67.4 |
MS.gene84852.t1 | AT4G15090 | 25.806 | 186 | 134 | 2 | 368 | 553 | 460 | 641 | 4.45e-11 | 67.4 |
MS.gene84852.t1 | AT4G15090 | 25.806 | 186 | 134 | 2 | 368 | 553 | 460 | 641 | 4.45e-11 | 67.4 |
MS.gene84852.t1 | AT4G15090 | 25.806 | 186 | 134 | 2 | 368 | 553 | 460 | 641 | 4.45e-11 | 67.4 |
MS.gene84852.t1 | AT4G15090 | 25.806 | 186 | 134 | 2 | 368 | 553 | 460 | 641 | 4.45e-11 | 67.4 |
Find 201 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACAATGCCTTTACTGATTT+TGG | 0.059598 | 1.2:-25205833 | MS.gene84852:CDS |
ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 1.2:+25202840 | None:intergenic |
ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 1.2:+25202942 | None:intergenic |
ATCCTCCTCCCACGTCTTTC+TGG | 0.104496 | 1.2:+25203044 | None:intergenic |
ATCCTTCTCCCACGTCTTTC+TGG | 0.118623 | 1.2:+25203146 | None:intergenic |
GCAAGCACTGAGCATCTTTC+TGG | 0.124164 | 1.2:-25202986 | MS.gene84852:CDS |
AATAAGAACTTGTCATATAA+TGG | 0.247315 | 1.2:-25204901 | MS.gene84852:CDS |
CCCACGTCTTTCTGGCTATC+AGG | 0.264446 | 1.2:+25203154 | None:intergenic |
TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 1.2:-25205060 | MS.gene84852:CDS |
TTTCCTACTTTAGCTTGTTC+AGG | 0.279784 | 1.2:+25202340 | None:intergenic |
TGCATTTACACCCTGTTTAT+CGG | 0.290641 | 1.2:-25204974 | MS.gene84852:CDS |
CCTGAAGTTCCAATTGTTAC+TGG | 0.294336 | 1.2:-25203454 | MS.gene84852:CDS |
ATCCTTCTCCCACGTCTCTT+TGG | 0.296957 | 1.2:+25203248 | None:intergenic |
CTTGTTGCGTTGGACGAAAA+AGG | 0.298153 | 1.2:-25203659 | MS.gene84852:CDS |
ACTTAACATTCAGATAGTTT+AGG | 0.298701 | 1.2:+25204760 | None:intergenic |
AGACGTGGCAGGAGGATTAA+AGG | 0.308394 | 1.2:-25202549 | MS.gene84852:CDS |
CTTAACATTCAGATAGTTTA+GGG | 0.312093 | 1.2:+25204761 | None:intergenic |
TTGCAGGGAAGTGTCCAAAA+AGG | 0.313369 | 1.2:-25203536 | MS.gene84852:CDS |
AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 1.2:-25205605 | MS.gene84852:CDS |
CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 1.2:-25205316 | MS.gene84852:CDS |
TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 1.2:-25205309 | MS.gene84852:CDS |
CCAGTAACAATTGGAACTTC+AGG | 0.318979 | 1.2:+25203454 | None:intergenic |
TTTCTTTGGGTGTCCTCCCT+TGG | 0.336054 | 1.2:+25202613 | None:intergenic |
CTATTAGGAAGAGTGATATT+AGG | 0.345442 | 1.2:-25205223 | MS.gene84852:CDS |
CGCAACAAGATCAAACATTC+TGG | 0.354601 | 1.2:+25203673 | None:intergenic |
AAGAGTTATGTTAGGAAGAA+AGG | 0.363884 | 1.2:-25204093 | MS.gene84852:intron |
CATTGGTTGGAGTAGGTTCA+TGG | 0.364482 | 1.2:+25205000 | None:intergenic |
TGCTCCAAAGAAGAATAAAA+AGG | 0.367722 | 1.2:-25203380 | MS.gene84852:CDS |
TGGCTAGCATGCTGAGACAT+TGG | 0.368552 | 1.2:+25202962 | None:intergenic |
TGGCTAGCACTCTGAGACAT+AGG | 0.369422 | 1.2:+25202575 | None:intergenic |
CCCACGTCTCTTTGGCTATC+GGG | 0.373225 | 1.2:+25203256 | None:intergenic |
GGAAGTAGATTCTAAGTTGA+TGG | 0.394286 | 1.2:-25203602 | MS.gene84852:CDS |
GTTGAGTTTCCAGTAACAAT+TGG | 0.399158 | 1.2:+25203445 | None:intergenic |
TCCCACGTCTCTTTGGCTAT+CGG | 0.401616 | 1.2:+25203255 | None:intergenic |
ATTGTCCATTGCCGCGACTT+TGG | 0.403101 | 1.2:+25202165 | None:intergenic |
ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 1.2:-25204900 | MS.gene84852:CDS |
GGTACACCGGAACATGATTA+CGG | 0.407134 | 1.2:-25205812 | MS.gene84852:CDS |
AGCATTTATCAAGGTTAGAT+AGG | 0.409294 | 1.2:-25205133 | MS.gene84852:CDS |
CAAGCACTGAGCATCTTTCT+GGG | 0.411830 | 1.2:-25202985 | MS.gene84852:CDS |
CAGCACAGGGGATGAAAACT+TGG | 0.418956 | 1.2:+25203990 | None:intergenic |
GATTATAGTGCTGGTGATAA+AGG | 0.421954 | 1.2:-25205581 | MS.gene84852:CDS |
TATAAGTACGGTAAGTGTAA+TGG | 0.430620 | 1.2:-25205251 | MS.gene84852:CDS |
GGATGACATACAAAAGCTTC+GGG | 0.433073 | 1.2:-25203491 | MS.gene84852:CDS |
GGAGCACCTTTGCACTTCAC+TGG | 0.435097 | 1.2:+25203397 | None:intergenic |
CAGTAACAATTGGAACTTCA+GGG | 0.439435 | 1.2:+25203455 | None:intergenic |
GAGAGAAGAAGCATTTATCA+AGG | 0.445750 | 1.2:-25205142 | MS.gene84852:CDS |
TGGCTAGCATGCTGAGACAT+GGG | 0.445822 | 1.2:+25202656 | None:intergenic |
AGACGTGGGAGGAGGATCAA+AGG | 0.446373 | 1.2:-25203038 | MS.gene84852:CDS |
CGAGGCTGCTGAAATCTATA+CGG | 0.448201 | 1.2:-25203941 | MS.gene84852:CDS |
GATATTAGGCGCAATGTTAA+CGG | 0.449906 | 1.2:-25205209 | MS.gene84852:CDS |
ATGTTGACTGCTTGCAGCAC+AGG | 0.458698 | 1.2:+25202688 | None:intergenic |
CAAGCTAAAGTAGGAAAGAA+AGG | 0.460317 | 1.2:-25202334 | MS.gene84852:CDS |
TGGATGACATACAAAAGCTT+CGG | 0.464217 | 1.2:-25203492 | MS.gene84852:CDS |
TGGCTAGCATGCTGAGACAT+GGG | 0.464703 | 1.2:+25202860 | None:intergenic |
TGGCTAGCATGCTGAGACAT+GGG | 0.464703 | 1.2:+25203064 | None:intergenic |
AAACATATCCGATCGTTGTT+GGG | 0.465026 | 1.2:-25205763 | MS.gene84852:CDS |
TAGTGAACACGGAGCCTAGC+TGG | 0.466097 | 1.2:+25205074 | None:intergenic |
GATGAGCGATATGATGAAAC+TGG | 0.468588 | 1.2:-25205638 | MS.gene84852:CDS |
TTGATGGAGATTGCTCGATA+TGG | 0.468688 | 1.2:-25203586 | MS.gene84852:CDS |
AAAACATATCCGATCGTTGT+TGG | 0.473771 | 1.2:-25205764 | MS.gene84852:CDS |
TTGGCTATCGGGCTGAGACA+TGG | 0.475904 | 1.2:+25203267 | None:intergenic |
TCTTGAATGTGGACTATTGT+GGG | 0.476439 | 1.2:-25203624 | MS.gene84852:CDS |
GTAGATAAAGCACAGATTGA+TGG | 0.478198 | 1.2:-25204939 | MS.gene84852:CDS |
TGATTACGGTTCTACGGATG+TGG | 0.481654 | 1.2:-25205798 | MS.gene84852:CDS |
GACGTGGCAGGAGGATTAAA+GGG | 0.486674 | 1.2:-25202548 | MS.gene84852:CDS |
CTGGCTAGCATGCTGAGACA+TGG | 0.489602 | 1.2:+25202859 | None:intergenic |
CTGGCTAGCATGCTGAGACA+TGG | 0.489602 | 1.2:+25203063 | None:intergenic |
TGTTCTGGTGATTATAGTGC+TGG | 0.489646 | 1.2:-25205590 | MS.gene84852:CDS |
CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 1.2:+25203976 | None:intergenic |
GTAGAACCGTAATCATGTTC+CGG | 0.492886 | 1.2:+25205806 | None:intergenic |
TTGGCTAGCATGCTGAGACA+TGG | 0.494151 | 1.2:+25202655 | None:intergenic |
GAAGATATTCAAGCTGGGTC+GGG | 0.494884 | 1.2:-25201998 | MS.gene84852:CDS |
AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 1.2:-25202936 | MS.gene84852:CDS |
AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 1.2:-25203242 | MS.gene84852:CDS |
TTCTTGAATGTGGACTATTG+TGG | 0.497990 | 1.2:-25203625 | MS.gene84852:CDS |
TAGCTTGTATGCTGATGTGC+TGG | 0.499229 | 1.2:-25203512 | MS.gene84852:CDS |
GCAGTATGTATGCAACAAGC+AGG | 0.502107 | 1.2:-25205171 | MS.gene84852:CDS |
GTGTAGGAAGATATTCAAGC+TGG | 0.502504 | 1.2:-25202004 | MS.gene84852:intron |
GGTACTTACGTTCATATTCA+CGG | 0.502731 | 1.2:+25202487 | None:intergenic |
TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 1.2:-25205351 | MS.gene84852:CDS |
TGGCTATCGGGCTGAGACAT+GGG | 0.505485 | 1.2:+25203268 | None:intergenic |
GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 1.2:-25205362 | MS.gene84852:CDS |
CCTTTGCACTTCACTGGCAA+TGG | 0.506348 | 1.2:+25203403 | None:intergenic |
GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 1.2:-25203901 | MS.gene84852:CDS |
GACGTGGGAGGAGGATCAAA+GGG | 0.511280 | 1.2:-25203037 | MS.gene84852:CDS |
AAGAATACTCAAGGGAATAC+AGG | 0.512005 | 1.2:-25205662 | MS.gene84852:CDS |
AGGGTGTAAATGCACATCAT+TGG | 0.512418 | 1.2:+25204983 | None:intergenic |
ATTCAAGCTGGGTCGGGAAG+CGG | 0.513307 | 1.2:-25201992 | MS.gene84852:CDS |
AGAGTGGATATCCCGGTGTT+GGG | 0.515690 | 1.2:-25204860 | MS.gene84852:CDS |
TATCCGATCGTTGTTGGGAG+TGG | 0.515943 | 1.2:-25205758 | MS.gene84852:CDS |
GGAGGCCAAAGTCGCGGCAA+TGG | 0.517476 | 1.2:-25202170 | MS.gene84852:CDS |
ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 1.2:-25205323 | MS.gene84852:CDS |
GAAGAAGATGATAATGTGTC+AGG | 0.520481 | 1.2:-25202139 | MS.gene84852:CDS |
GACGTGGGAGGAGGATCAAA+GGG | 0.523575 | 1.2:-25202731 | MS.gene84852:CDS |
GACGTGGGAGAAGGATCAAA+GGG | 0.526228 | 1.2:-25203241 | MS.gene84852:CDS |
ATCACATTCACAGTAGGTTC+AGG | 0.528477 | 1.2:+25201968 | None:intergenic |
CGGTGTACCAAAATCAGTAA+AGG | 0.530148 | 1.2:+25205826 | None:intergenic |
AAGAGTGGATATCCCGGTGT+TGG | 0.530431 | 1.2:-25204861 | MS.gene84852:CDS |
TGGCTATCAGGCTGAGACAT+GGG | 0.531630 | 1.2:+25203166 | None:intergenic |
CAGCAATTCAGTGTTCGTGC+AGG | 0.535206 | 1.2:-25203768 | MS.gene84852:CDS |
GGAAGATATTCAAGCTGGGT+CGG | 0.536191 | 1.2:-25201999 | MS.gene84852:CDS |
CCGATCGTTGTTGGGAGTGG+TGG | 0.539432 | 1.2:-25205755 | MS.gene84852:CDS |
AGCCAGAAAGACGTGGGAGG+AGG | 0.544096 | 1.2:-25203046 | MS.gene84852:CDS |
ATTCCTGAACAAGCTAAAGT+AGG | 0.547544 | 1.2:-25202343 | MS.gene84852:CDS |
TTTATGAAATTCTATACGAT+GGG | 0.547975 | 1.2:-25203798 | MS.gene84852:CDS |
AGACGTGGGAGGAGGATCAA+AGG | 0.549459 | 1.2:-25202732 | MS.gene84852:CDS |
AAGTCACATTCAACGACGTA+AGG | 0.551272 | 1.2:+25201904 | None:intergenic |
GGAACATGATTACGGTTCTA+CGG | 0.552732 | 1.2:-25205804 | MS.gene84852:CDS |
ATGTGTGCTGTTATTAAGGA+TGG | 0.553864 | 1.2:-25204798 | MS.gene84852:CDS |
TTGTCATATAATGGGATACA+TGG | 0.555297 | 1.2:-25204892 | MS.gene84852:CDS |
AGCCAGAAAGACGTGGGAGA+AGG | 0.560631 | 1.2:-25203148 | MS.gene84852:CDS |
AGCCAAAGAGACGTGGGAGA+AGG | 0.560631 | 1.2:-25203250 | MS.gene84852:CDS |
GAAGATTTGTTTCTTGAATG+TGG | 0.561039 | 1.2:-25203635 | MS.gene84852:CDS |
CTGGCTATCAGGCTGAGACA+TGG | 0.561329 | 1.2:+25203165 | None:intergenic |
TTCTTAGTGAACCCAACACC+GGG | 0.562418 | 1.2:+25204849 | None:intergenic |
CCACCACTCCCAACAACGAT+CGG | 0.562593 | 1.2:+25205755 | None:intergenic |
TGCAGGAAATTTGAATCTCG+AGG | 0.563863 | 1.2:-25203751 | MS.gene84852:CDS |
GTTTATGAAATTCTATACGA+TGG | 0.564495 | 1.2:-25203799 | MS.gene84852:CDS |
GACGTGGGAGAAGGATCAAA+GGG | 0.564696 | 1.2:-25202935 | MS.gene84852:CDS |
AGACGTGGGAGGAGGATCCA+AGG | 0.565474 | 1.2:-25202630 | MS.gene84852:CDS |
AGCCAGAAAGACGTGGGAGA+AGG | 0.570261 | 1.2:-25202944 | MS.gene84852:CDS |
AATGTTTGATCTTGTTGCGT+TGG | 0.571747 | 1.2:-25203669 | MS.gene84852:CDS |
TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 1.2:-25205346 | MS.gene84852:CDS |
GCAGGAAATTTGAATCTCGA+GGG | 0.574935 | 1.2:-25203750 | MS.gene84852:CDS |
AGAAAGGTGCTCAGTGCTTG+CGG | 0.575791 | 1.2:+25203192 | None:intergenic |
GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 1.2:+25203977 | None:intergenic |
TAGTCAAAGCGAGGTTGTCA+AGG | 0.577221 | 1.2:-25202522 | MS.gene84852:CDS |
GATGAAAGTGAAGGTGATGA+AGG | 0.577534 | 1.2:-25205497 | MS.gene84852:CDS |
TACATGGTGGCTCAGAAGAG+TGG | 0.578271 | 1.2:-25204876 | MS.gene84852:CDS |
GCCTGATAGCCAGAAAGACG+TGG | 0.578633 | 1.2:-25203155 | MS.gene84852:CDS |
AGAAAGATGCTCAGTGCTTG+CGG | 0.581054 | 1.2:+25202988 | None:intergenic |
ACTCTGTCATCTTCGTTAGA+CGG | 0.581881 | 1.2:+25202109 | None:intergenic |
AATTATACGAAGAATACTCA+AGG | 0.584441 | 1.2:-25205671 | MS.gene84852:CDS |
CAGTATGTATGCAACAAGCA+GGG | 0.584535 | 1.2:-25205170 | MS.gene84852:CDS |
GCCCGATAGCCAAAGAGACG+TGG | 0.586320 | 1.2:-25203257 | MS.gene84852:CDS |
GCTGAGACATGGGCACAGAA+AGG | 0.587789 | 1.2:+25203176 | None:intergenic |
GATGAAGGTGAACGTGATGA+AGG | 0.589312 | 1.2:-25205521 | MS.gene84852:CDS |
GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 1.2:-25205569 | MS.gene84852:CDS |
GTAAGAAAATGCTCAAACTG+TGG | 0.589849 | 1.2:-25203346 | MS.gene84852:CDS |
TGTAAATGCACATCATTGGT+TGG | 0.591074 | 1.2:+25204987 | None:intergenic |
GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 1.2:-25202951 | MS.gene84852:CDS |
GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 1.2:-25203053 | MS.gene84852:CDS |
TTTCTTAGTGAACCCAACAC+CGG | 0.593472 | 1.2:+25204848 | None:intergenic |
GACGTGGGAGGAGGATCCAA+GGG | 0.595722 | 1.2:-25202629 | MS.gene84852:CDS |
GTTGACAAAATATCTTGAGG+AGG | 0.598346 | 1.2:-25203824 | MS.gene84852:CDS |
GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 1.2:-25205617 | MS.gene84852:CDS |
TGAACCTACTGTGAATGTGA+TGG | 0.609255 | 1.2:-25201966 | MS.gene84852:CDS |
GATTTAGGAGGCCAAAGTCG+CGG | 0.612533 | 1.2:-25202176 | MS.gene84852:intron |
AATCTGTGCTTTATCTACCT+CGG | 0.613894 | 1.2:+25204944 | None:intergenic |
CTGGCAATGGATCACGTATG+TGG | 0.614693 | 1.2:+25203416 | None:intergenic |
AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 1.2:-25205401 | MS.gene84852:CDS |
GCTCAGAAGAGTGGATATCC+CGG | 0.616332 | 1.2:-25204867 | MS.gene84852:CDS |
TGTAGGAAGATATTCAAGCT+GGG | 0.617274 | 1.2:-25202003 | MS.gene84852:intron |
TCTGCGTTGTCTTGAACGCG+AGG | 0.617404 | 1.2:-25203959 | MS.gene84852:CDS |
TGCACATCATTGGTTGGAGT+AGG | 0.617941 | 1.2:+25204993 | None:intergenic |
GATGAAAGTCAAGGTGATGA+AGG | 0.618015 | 1.2:-25205536 | MS.gene84852:CDS |
ACTTCCATCACATTCACAGT+AGG | 0.626348 | 1.2:+25201962 | None:intergenic |
GAAAGTGAAGGTGATGAAGG+TGG | 0.632263 | 1.2:-25205494 | MS.gene84852:CDS |
AGTATGTATGCAACAAGCAG+GGG | 0.634341 | 1.2:-25205169 | MS.gene84852:CDS |
TTGACAAAATATCTTGAGGA+GGG | 0.634347 | 1.2:-25203823 | MS.gene84852:CDS |
TGTTACTGGAAACTCAACAA+TGG | 0.640006 | 1.2:-25203440 | MS.gene84852:CDS |
CCCGATAGCCAAAGAGACGT+GGG | 0.644492 | 1.2:-25203256 | MS.gene84852:CDS |
CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 1.2:-25205088 | MS.gene84852:CDS |
AGTGAAGGTGATGAAGGTGG+AGG | 0.647603 | 1.2:-25205491 | MS.gene84852:CDS |
CAGGAAATTTGAATCTCGAG+GGG | 0.648693 | 1.2:-25203749 | MS.gene84852:CDS |
GAAAGGAAAAGAAGAACGCG+TGG | 0.650811 | 1.2:-25202317 | MS.gene84852:intron |
GAAGTTGACAAAATATCTTG+AGG | 0.651334 | 1.2:-25203827 | MS.gene84852:CDS |
ATTATACGAAGAATACTCAA+GGG | 0.665058 | 1.2:-25205670 | MS.gene84852:CDS |
TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 1.2:-25205357 | MS.gene84852:CDS |
GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 1.2:-25205410 | MS.gene84852:CDS |
TCATATAATGGGATACATGG+TGG | 0.669224 | 1.2:-25204889 | MS.gene84852:CDS |
CAAAGGGAGGCAAATCAAAG+AGG | 0.670795 | 1.2:-25203021 | MS.gene84852:CDS |
TTAACGGTGTGATTGTAATG+AGG | 0.672944 | 1.2:-25205193 | MS.gene84852:CDS |
GATGATGATGATGTAAGTCA+TGG | 0.675630 | 1.2:-25205695 | MS.gene84852:CDS |
CTTGAATGTGGACTATTGTG+GGG | 0.678410 | 1.2:-25203623 | MS.gene84852:CDS |
CAAAGGGAGGAAAATCAAAG+AGG | 0.680357 | 1.2:-25203225 | MS.gene84852:CDS |
AGGTGTTGCACTGAGTGTGA+AGG | 0.686205 | 1.2:-25203881 | MS.gene84852:CDS |
GTGGGAGGAGGATCCAAGGG+AGG | 0.689036 | 1.2:-25202626 | MS.gene84852:CDS |
AAAGGGAGGTAGTCAAAGCG+AGG | 0.690394 | 1.2:-25202531 | MS.gene84852:CDS |
CCTGATAGCCAGAAAGACGT+GGG | 0.690821 | 1.2:-25203154 | MS.gene84852:CDS |
GGATAAGAACATTGACAGTG+AGG | 0.691214 | 1.2:-25202377 | MS.gene84852:CDS |
CCATTGCCAGTGAAGTGCAA+AGG | 0.692298 | 1.2:-25203403 | MS.gene84852:CDS |
GCTAGCCAGAAAGACGTGGG+AGG | 0.694454 | 1.2:-25203049 | MS.gene84852:CDS |
CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 1.2:-25202950 | MS.gene84852:CDS |
CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 1.2:-25203052 | MS.gene84852:CDS |
AGTGAAGGTCATGCTAGTGA+AGG | 0.698593 | 1.2:-25205446 | MS.gene84852:CDS |
GTGGCAGGAGGATTAAAGGG+AGG | 0.699976 | 1.2:-25202545 | MS.gene84852:CDS |
GGTGGAGGTGATGAAAGTGA+AGG | 0.700815 | 1.2:-25205476 | MS.gene84852:CDS |
TGTTTATCGGAAAATATCCG+AGG | 0.704996 | 1.2:-25204961 | MS.gene84852:CDS |
GACAATGAAAGTGATGATGG+TGG | 0.706532 | 1.2:-25205614 | MS.gene84852:CDS |
ATTGATGGTCTTCAGTCACA+CGG | 0.708259 | 1.2:-25204924 | MS.gene84852:CDS |
GTGGGAGAAGGATCAAAGGG+AGG | 0.709029 | 1.2:-25203238 | MS.gene84852:CDS |
GTGGGAGGAGGATCAAAGGG+AGG | 0.710691 | 1.2:-25202728 | MS.gene84852:CDS |
GTGGGAGGAGGATCAAAGGG+AGG | 0.713504 | 1.2:-25203034 | MS.gene84852:CDS |
AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 1.2:-25205416 | MS.gene84852:CDS |
AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 1.2:-25205461 | MS.gene84852:CDS |
GATGAAGGTGATGAAAGTGA+AGG | 0.727165 | 1.2:-25205506 | MS.gene84852:CDS |
AGTGAAGGTGATGAAAGTGA+AGG | 0.731903 | 1.2:-25205431 | MS.gene84852:CDS |
AGTGAATGCGATGAAAGTCA+AGG | 0.740679 | 1.2:-25205545 | MS.gene84852:CDS |
ACTTTGTACGAGTGATACGT+CGG | 0.754568 | 1.2:+25205099 | None:intergenic |
CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 1.2:+25203978 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TACGATTTTTATTATAAGTA+CGG | - | chr1.2:25202495-25202514 | MS.gene84852:intron | 15.0% |
!! | AAATCATAAAGAGTTATGTT+AGG | - | chr1.2:25203657-25203676 | MS.gene84852:CDS | 20.0% |
!! | AAATTGAGAAGTTAATCAAA+AGG | + | chr1.2:25205355-25205374 | None:intergenic | 20.0% |
!! | AATAAGAACTTGTCATATAA+TGG | - | chr1.2:25202857-25202876 | MS.gene84852:CDS | 20.0% |
!! | ATAAGAACTTGTCATATAAT+GGG | - | chr1.2:25202858-25202877 | MS.gene84852:CDS | 20.0% |
!! | ATTGAAAAACAACATATATG+AGG | + | chr1.2:25205543-25205562 | None:intergenic | 20.0% |
!! | CTTCAACACAAAAAAAATAT+GGG | + | chr1.2:25204044-25204063 | None:intergenic | 20.0% |
!! | TTTATGAAATTCTATACGAT+GGG | - | chr1.2:25203960-25203979 | MS.gene84852:CDS | 20.0% |
!!! | ACATGGATAATTTTTGATTT+AGG | - | chr1.2:25205567-25205586 | MS.gene84852:CDS | 20.0% |
!!! | TTGATTAACTTCTCAATTTT+TGG | - | chr1.2:25205356-25205375 | MS.gene84852:CDS | 20.0% |
! | AAACAATAGACACTTATATG+TGG | - | chr1.2:25203252-25203271 | MS.gene84852:CDS | 25.0% |
! | AACAATAGACACTTATATGT+GGG | - | chr1.2:25203253-25203272 | MS.gene84852:CDS | 25.0% |
! | AATTATACGAAGAATACTCA+AGG | - | chr1.2:25202087-25202106 | MS.gene84852:intron | 25.0% |
! | ACTTAACATTCAGATAGTTT+AGG | + | chr1.2:25203001-25203020 | None:intergenic | 25.0% |
! | ATAAATTCATTAACTGCTGA+AGG | - | chr1.2:25202435-25202454 | MS.gene84852:intron | 25.0% |
! | ATATATGAGGTCAAGAATAT+GGG | + | chr1.2:25205530-25205549 | None:intergenic | 25.0% |
! | ATATGAGAACAAAGAATTGT+GGG | - | chr1.2:25203565-25203584 | MS.gene84852:CDS | 25.0% |
! | ATTATACGAAGAATACTCAA+GGG | - | chr1.2:25202088-25202107 | MS.gene84852:intron | 25.0% |
! | CCAACAATGTGTTTAAATAT+AGG | - | chr1.2:25205292-25205311 | MS.gene84852:CDS | 25.0% |
! | CCTATATTTAAACACATTGT+TGG | + | chr1.2:25205295-25205314 | None:intergenic | 25.0% |
! | CCTTCAACACAAAAAAAATA+TGG | + | chr1.2:25204045-25204064 | None:intergenic | 25.0% |
! | CTTAACATTCAGATAGTTTA+GGG | + | chr1.2:25203000-25203019 | None:intergenic | 25.0% |
! | GTTTATGAAATTCTATACGA+TGG | - | chr1.2:25203959-25203978 | MS.gene84852:CDS | 25.0% |
!! | AAAAATGTGTGCTGTTATTA+AGG | - | chr1.2:25202956-25202975 | MS.gene84852:CDS | 25.0% |
!! | AGCAATGTACTCTAATTTTA+CGG | - | chr1.2:25203466-25203485 | MS.gene84852:CDS | 25.0% |
!! | ATGTGTTTACAAATTTTTGC+AGG | - | chr1.2:25204206-25204225 | MS.gene84852:intron | 25.0% |
!! | TGTGTTTACAAATTTTTGCA+GGG | - | chr1.2:25204207-25204226 | MS.gene84852:intron | 25.0% |
!! | TTCTTTGTTCTCATATGTTT+TGG | + | chr1.2:25203561-25203580 | None:intergenic | 25.0% |
!!! | AAGAATTCAACTTTTTTGGA+AGG | - | chr1.2:25203434-25203453 | MS.gene84852:CDS | 25.0% |
!!! | AAGTCAAAAGTATTTCTCAT+TGG | + | chr1.2:25205728-25205747 | None:intergenic | 25.0% |
!!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr1.2:25203070-25203089 | MS.gene84852:CDS | 25.0% |
!!! | CCATATTTTTTTTGTGTTGA+AGG | - | chr1.2:25204042-25204061 | MS.gene84852:CDS | 25.0% |
!!! | GTTGTTTTTCAATGTTAACA+TGG | - | chr1.2:25205550-25205569 | MS.gene84852:CDS | 25.0% |
!!! | TGGATAATTTTTGATTTAGG+AGG | - | chr1.2:25205570-25205589 | MS.gene84852:CDS | 25.0% |
!!! | TGTCAAGAATTCAACTTTTT+TGG | - | chr1.2:25203430-25203449 | MS.gene84852:CDS | 25.0% |
AAGAGTTATGTTAGGAAGAA+AGG | - | chr1.2:25203665-25203684 | MS.gene84852:CDS | 30.0% | |
ACAAAAAAAATATGGGAGCA+TGG | + | chr1.2:25204037-25204056 | None:intergenic | 30.0% | |
AGCATTTATCAAGGTTAGAT+AGG | - | chr1.2:25202625-25202644 | MS.gene84852:CDS | 30.0% | |
ATATTACTTGTGCAGTAAGT+AGG | + | chr1.2:25205329-25205348 | None:intergenic | 30.0% | |
ATTACGTTTAGACTCAACAT+TGG | + | chr1.2:25205695-25205714 | None:intergenic | 30.0% | |
CAAATATAACTGTTTGTGAG+TGG | + | chr1.2:25203211-25203230 | None:intergenic | 30.0% | |
CACTCACAAACAGTTATATT+TGG | - | chr1.2:25203209-25203228 | MS.gene84852:CDS | 30.0% | |
CATATATGAGGTCAAGAATA+TGG | + | chr1.2:25205531-25205550 | None:intergenic | 30.0% | |
CATATGAGAACAAAGAATTG+TGG | - | chr1.2:25203564-25203583 | MS.gene84852:CDS | 30.0% | |
CTATTAGGAAGAGTGATATT+AGG | - | chr1.2:25202535-25202554 | MS.gene84852:CDS | 30.0% | |
GAAGTTGACAAAATATCTTG+AGG | - | chr1.2:25203931-25203950 | MS.gene84852:CDS | 30.0% | |
GAATATTCACAAAAGGAATG+TGG | + | chr1.2:25203035-25203054 | None:intergenic | 30.0% | |
GTGAAAGAAGAGATTATGAA+AGG | - | chr1.2:25203857-25203876 | MS.gene84852:CDS | 30.0% | |
TATAAGTACGGTAAGTGTAA+TGG | - | chr1.2:25202507-25202526 | MS.gene84852:CDS | 30.0% | |
TGCTCCAAAGAAGAATAAAA+AGG | - | chr1.2:25204378-25204397 | MS.gene84852:intron | 30.0% | |
TTGACAAAATATCTTGAGGA+GGG | - | chr1.2:25203935-25203954 | MS.gene84852:CDS | 30.0% | |
! | AAAGTATTTCTCATTGGACT+GGG | + | chr1.2:25205722-25205741 | None:intergenic | 30.0% |
! | AATGTACTCTAATTTTACGG+AGG | - | chr1.2:25203469-25203488 | MS.gene84852:CDS | 30.0% |
! | ACAACATATCTACCCTTTTT+GGG | + | chr1.2:25202714-25202733 | None:intergenic | 30.0% |
! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr1.2:25203281-25203300 | MS.gene84852:CDS | 30.0% |
! | AGGATGAATTTGAAGAGTTT+TGG | - | chr1.2:25203489-25203508 | MS.gene84852:CDS | 30.0% |
! | CAGAACATGTCTTTTTCTTT+GGG | + | chr1.2:25205161-25205180 | None:intergenic | 30.0% |
! | GAAGATTTGTTTCTTGAATG+TGG | - | chr1.2:25204123-25204142 | MS.gene84852:intron | 30.0% |
! | GAGCATTTTCTTACAAACTT+TGG | + | chr1.2:25204406-25204425 | None:intergenic | 30.0% |
! | GATGAATTTGAAGAGTTTTG+GGG | - | chr1.2:25203491-25203510 | MS.gene84852:CDS | 30.0% |
! | GGATGAATTTGAAGAGTTTT+GGG | - | chr1.2:25203490-25203509 | MS.gene84852:CDS | 30.0% |
! | TTGTCATATAATGGGATACA+TGG | - | chr1.2:25202866-25202885 | MS.gene84852:CDS | 30.0% |
!! | AAAAGTATTTCTCATTGGAC+TGG | + | chr1.2:25205723-25205742 | None:intergenic | 30.0% |
!! | AGATCAGATTATTTCTGCTT+TGG | - | chr1.2:25203107-25203126 | MS.gene84852:CDS | 30.0% |
!! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr1.2:25203492-25203511 | MS.gene84852:CDS | 30.0% |
!! | GACGTTTGAAATGTCTATTT+TGG | - | chr1.2:25203069-25203088 | MS.gene84852:CDS | 30.0% |
!!! | AACAATGCCTTTACTGATTT+TGG | - | chr1.2:25201925-25201944 | MS.gene84852:CDS | 30.0% |
!!! | AGTGTAATGGTTTTGCTATT+AGG | - | chr1.2:25202520-25202539 | MS.gene84852:CDS | 30.0% |
!!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr1.2:25202729-25202748 | MS.gene84852:CDS | 30.0% |
!!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr1.2:25202728-25202747 | MS.gene84852:CDS | 30.0% |
!!! | TTAACTTCTCAATTTTTGGC+AGG | - | chr1.2:25205360-25205379 | MS.gene84852:CDS | 30.0% |
AAAACATATCCGATCGTTGT+TGG | - | chr1.2:25201994-25202013 | MS.gene84852:CDS | 35.0% | |
AAACATATCCGATCGTTGTT+GGG | - | chr1.2:25201995-25202014 | MS.gene84852:CDS | 35.0% | |
AAGAATACTCAAGGGAATAC+AGG | - | chr1.2:25202096-25202115 | MS.gene84852:intron | 35.0% | |
AATCTGTGCTTTATCTACCT+CGG | + | chr1.2:25202817-25202836 | None:intergenic | 35.0% | |
AATGTTTGATCTTGTTGCGT+TGG | - | chr1.2:25204089-25204108 | MS.gene84852:intron | 35.0% | |
AGTGGCAGAATATTCACAAA+AGG | + | chr1.2:25203042-25203061 | None:intergenic | 35.0% | |
ATTCCTGAACAAGCTAAAGT+AGG | - | chr1.2:25205415-25205434 | MS.gene84852:CDS | 35.0% | |
CAAGCTAAAGTAGGAAAGAA+AGG | - | chr1.2:25205424-25205443 | MS.gene84852:CDS | 35.0% | |
CAGTAACAATTGGAACTTCA+GGG | + | chr1.2:25204306-25204325 | None:intergenic | 35.0% | |
CATTAACTGCTGAAGGAATA+AGG | - | chr1.2:25202442-25202461 | MS.gene84852:intron | 35.0% | |
GATATTAGGCGCAATGTTAA+CGG | - | chr1.2:25202549-25202568 | MS.gene84852:CDS | 35.0% | |
GGTACTTACGTTCATATTCA+CGG | + | chr1.2:25205274-25205293 | None:intergenic | 35.0% | |
GTAAGAAAATGCTCAAACTG+TGG | - | chr1.2:25204412-25204431 | MS.gene84852:intron | 35.0% | |
GTAGATAAAGCACAGATTGA+TGG | - | chr1.2:25202819-25202838 | MS.gene84852:intron | 35.0% | |
GTGAAGGAAAAAGAAGTGAA+TGG | - | chr1.2:25203893-25203912 | MS.gene84852:CDS | 35.0% | |
GTTGACAAAATATCTTGAGG+AGG | - | chr1.2:25203934-25203953 | MS.gene84852:CDS | 35.0% | |
GTTGAGTTTCCAGTAACAAT+TGG | + | chr1.2:25204316-25204335 | None:intergenic | 35.0% | |
TCCCATACAATCTAGAAAAC+TGG | + | chr1.2:25203285-25203304 | None:intergenic | 35.0% | |
TGCATTTACACCCTGTTTAT+CGG | - | chr1.2:25202784-25202803 | MS.gene84852:intron | 35.0% | |
TGCTGAAGGAATAAGGAAAA+TGG | - | chr1.2:25202449-25202468 | MS.gene84852:intron | 35.0% | |
TGGATGACATACAAAAGCTT+CGG | - | chr1.2:25204266-25204285 | MS.gene84852:intron | 35.0% | |
TGTAAATGCACATCATTGGT+TGG | + | chr1.2:25202774-25202793 | None:intergenic | 35.0% | |
TGTAGGAAGATATTCAAGCT+GGG | - | chr1.2:25205755-25205774 | MS.gene84852:CDS | 35.0% | |
TGTTACTGGAAACTCAACAA+TGG | - | chr1.2:25204318-25204337 | MS.gene84852:intron | 35.0% | |
TGTTTATCGGAAAATATCCG+AGG | - | chr1.2:25202797-25202816 | MS.gene84852:intron | 35.0% | |
TTAACGGTGTGATTGTAATG+AGG | - | chr1.2:25202565-25202584 | MS.gene84852:CDS | 35.0% | |
! | ATGTGTGCTGTTATTAAGGA+TGG | - | chr1.2:25202960-25202979 | MS.gene84852:CDS | 35.0% |
! | CACAACATATCTACCCTTTT+TGG | + | chr1.2:25202715-25202734 | None:intergenic | 35.0% |
! | CGGATATTTTCCGATAAACA+GGG | + | chr1.2:25202797-25202816 | None:intergenic | 35.0% |
! | GAAGAAGATGATAATGTGTC+AGG | - | chr1.2:25205619-25205638 | MS.gene84852:CDS | 35.0% |
! | GAAGATGATGATGTAGTTGT+TGG | - | chr1.2:25202396-25202415 | MS.gene84852:intron | 35.0% |
! | GACCAGTTTTCTAGATTGTA+TGG | - | chr1.2:25203280-25203299 | MS.gene84852:CDS | 35.0% |
! | GATGATGATGATGTAAGTCA+TGG | - | chr1.2:25202063-25202082 | MS.gene84852:intron | 35.0% |
! | GCAGAACATGTCTTTTTCTT+TGG | + | chr1.2:25205162-25205181 | None:intergenic | 35.0% |
! | GGAAGTAGATTCTAAGTTGA+TGG | - | chr1.2:25204156-25204175 | MS.gene84852:intron | 35.0% |
! | GGTGCCTTTTTATTCTTCTT+TGG | + | chr1.2:25204385-25204404 | None:intergenic | 35.0% |
! | TCATATAATGGGATACATGG+TGG | - | chr1.2:25202869-25202888 | MS.gene84852:CDS | 35.0% |
! | TCGGATATTTTCCGATAAAC+AGG | + | chr1.2:25202798-25202817 | None:intergenic | 35.0% |
! | TCTTGAATGTGGACTATTGT+GGG | - | chr1.2:25204134-25204153 | MS.gene84852:intron | 35.0% |
! | TTCTTGAATGTGGACTATTG+TGG | - | chr1.2:25204133-25204152 | MS.gene84852:intron | 35.0% |
!! | AAATGTCTATTTTGGGCAGA+TGG | - | chr1.2:25203077-25203096 | MS.gene84852:CDS | 35.0% |
!! | AGTTATATTTGGTGCTGCAT+TGG | - | chr1.2:25203220-25203239 | MS.gene84852:CDS | 35.0% |
!! | ATTTCTGCACAATTTTGACG+AGG | - | chr1.2:25203700-25203719 | MS.gene84852:CDS | 35.0% |
!! | GAGAGAAGAAGCATTTATCA+AGG | - | chr1.2:25202616-25202635 | MS.gene84852:CDS | 35.0% |
!! | GATTATAGTGCTGGTGATAA+AGG | - | chr1.2:25202177-25202196 | MS.gene84852:intron | 35.0% |
!! | TTTCCTACTTTAGCTTGTTC+AGG | + | chr1.2:25205421-25205440 | None:intergenic | 35.0% |
!!! | CTTTACTGATTTTGGTACAC+CGG | - | chr1.2:25201933-25201952 | MS.gene84852:CDS | 35.0% |
!!! | CTTTTGACTTGTGTTTGTGT+AGG | - | chr1.2:25205738-25205757 | MS.gene84852:CDS | 35.0% |
!!! | TCATATGTTTTGGTAACCCA+TGG | + | chr1.2:25203551-25203570 | None:intergenic | 35.0% |
!!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr1.2:25203493-25203512 | MS.gene84852:CDS | 35.0% |
AAAAAGACGTTCAGTGTCTG+CGG | + | chr1.2:25204467-25204486 | None:intergenic | 40.0% | |
AAAGGAATGTGGATCAGTTG+AGG | + | chr1.2:25203024-25203043 | None:intergenic | 40.0% | |
ACAAAATCACCAACGGATAG+TGG | + | chr1.2:25203175-25203194 | None:intergenic | 40.0% | |
ACTCTGTCATCTTCGTTAGA+CGG | + | chr1.2:25205652-25205671 | None:intergenic | 40.0% | |
ACTTCCATCACATTCACAGT+AGG | + | chr1.2:25205799-25205818 | None:intergenic | 40.0% | |
ACTTTGTACGAGTGATACGT+CGG | + | chr1.2:25202662-25202681 | None:intergenic | 40.0% | |
AGGGTGTAAATGCACATCAT+TGG | + | chr1.2:25202778-25202797 | None:intergenic | 40.0% | |
AGTATGTATGCAACAAGCAG+GGG | - | chr1.2:25202589-25202608 | MS.gene84852:CDS | 40.0% | |
AGTGAAGGTGATGAAAGTGA+AGG | - | chr1.2:25202297-25202316 | MS.gene84852:intron | 40.0% | |
AGTGAATGCGATGAAAGTCA+AGG | - | chr1.2:25202213-25202232 | MS.gene84852:intron | 40.0% | |
ATCACATTCACAGTAGGTTC+AGG | + | chr1.2:25205793-25205812 | None:intergenic | 40.0% | |
CAAAGGGAGGAAAATCAAAG+AGG | - | chr1.2:25204533-25204552 | MS.gene84852:intron | 40.0% | |
CAGGAAATTTGAATCTCGAG+GGG | - | chr1.2:25204009-25204028 | MS.gene84852:CDS | 40.0% | |
CAGTATGTATGCAACAAGCA+GGG | - | chr1.2:25202588-25202607 | MS.gene84852:CDS | 40.0% | |
CCAAAAGCAGTTGTAACAGA+TGG | - | chr1.2:25203314-25203333 | MS.gene84852:CDS | 40.0% | |
CCAGTAACAATTGGAACTTC+AGG | + | chr1.2:25204307-25204326 | None:intergenic | 40.0% | |
CCTGAAGTTCCAATTGTTAC+TGG | - | chr1.2:25204304-25204323 | MS.gene84852:intron | 40.0% | |
CGCAACAAGATCAAACATTC+TGG | + | chr1.2:25204088-25204107 | None:intergenic | 40.0% | |
CGGTGTACCAAAATCAGTAA+AGG | + | chr1.2:25201935-25201954 | None:intergenic | 40.0% | |
GAACAAATACCACTATCCGT+TGG | - | chr1.2:25203163-25203182 | MS.gene84852:CDS | 40.0% | |
GAATATTCTGCCACTGATGA+CGG | - | chr1.2:25203047-25203066 | MS.gene84852:CDS | 40.0% | |
GATGAAAGTCAAGGTGATGA+AGG | - | chr1.2:25202222-25202241 | MS.gene84852:intron | 40.0% | |
GATGAAAGTGAAGGTGATGA+AGG | - | chr1.2:25202261-25202280 | MS.gene84852:intron | 40.0% | |
GATGAAGGTGATGAAAGTGA+AGG | - | chr1.2:25202252-25202271 | MS.gene84852:intron | 40.0% | |
GATGAGCGATATGATGAAAC+TGG | - | chr1.2:25202120-25202139 | MS.gene84852:CDS | 40.0% | |
GCAGGAAATTTGAATCTCGA+GGG | - | chr1.2:25204008-25204027 | MS.gene84852:CDS | 40.0% | |
GCATCTGAACAAGAATGCTA+TGG | - | chr1.2:25203403-25203422 | MS.gene84852:CDS | 40.0% | |
GGAACATGATTACGGTTCTA+CGG | - | chr1.2:25201954-25201973 | MS.gene84852:CDS | 40.0% | |
GGAGACAATGAAAGTGATGA+TGG | - | chr1.2:25202141-25202160 | MS.gene84852:CDS | 40.0% | |
GGATAAGAACATTGACAGTG+AGG | - | chr1.2:25205381-25205400 | MS.gene84852:CDS | 40.0% | |
GGATGACATACAAAAGCTTC+GGG | - | chr1.2:25204267-25204286 | MS.gene84852:intron | 40.0% | |
GGTGATAAAGGTGAAGATGA+TGG | - | chr1.2:25202189-25202208 | MS.gene84852:intron | 40.0% | |
GTAGAACCGTAATCATGTTC+CGG | + | chr1.2:25201955-25201974 | None:intergenic | 40.0% | |
GTGTAGGAAGATATTCAAGC+TGG | - | chr1.2:25205754-25205773 | MS.gene84852:CDS | 40.0% | |
GTTCACTACAGACCCAAAAA+GGG | - | chr1.2:25202699-25202718 | MS.gene84852:CDS | 40.0% | |
TGAACCTACTGTGAATGTGA+TGG | - | chr1.2:25205792-25205811 | MS.gene84852:CDS | 40.0% | |
TGCAGGAAATTTGAATCTCG+AGG | - | chr1.2:25204007-25204026 | MS.gene84852:CDS | 40.0% | |
TGTTCACTACAGACCCAAAA+AGG | - | chr1.2:25202698-25202717 | MS.gene84852:CDS | 40.0% | |
TGTTCTGGTGATTATAGTGC+TGG | - | chr1.2:25202168-25202187 | MS.gene84852:CDS | 40.0% | |
TTGATGGAGATTGCTCGATA+TGG | - | chr1.2:25204172-25204191 | MS.gene84852:intron | 40.0% | |
TTTCTTAGTGAACCCAACAC+CGG | + | chr1.2:25202913-25202932 | None:intergenic | 40.0% | |
! | AGCATACAAGCTACCCTTTT+TGG | + | chr1.2:25204239-25204258 | None:intergenic | 40.0% |
! | ATTGATGGTCTTCAGTCACA+CGG | - | chr1.2:25202834-25202853 | MS.gene84852:intron | 40.0% |
! | CAGCACAGGTCTTTTTCTTT+GGG | + | chr1.2:25204957-25204976 | None:intergenic | 40.0% |
! | CCATCTGTTACAACTGCTTT+TGG | + | chr1.2:25203317-25203336 | None:intergenic | 40.0% |
! | CTTGAATGTGGACTATTGTG+GGG | - | chr1.2:25204135-25204154 | MS.gene84852:intron | 40.0% |
! | TAACCCATGGATTGTTCTCA+AGG | + | chr1.2:25203538-25203557 | None:intergenic | 40.0% |
! | TGATGATGTAGTTGTTGGTG+AGG | - | chr1.2:25202401-25202420 | MS.gene84852:intron | 40.0% |
! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr1.2:25202407-25202426 | MS.gene84852:intron | 40.0% |
! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr1.2:25202412-25202431 | MS.gene84852:intron | 40.0% |
!! | AATTTTGACGAGGCAATGAG+GGG | - | chr1.2:25203710-25203729 | MS.gene84852:CDS | 40.0% |
!! | ACAATTTTGACGAGGCAATG+AGG | - | chr1.2:25203708-25203727 | MS.gene84852:CDS | 40.0% |
!! | CAATTTTGACGAGGCAATGA+GGG | - | chr1.2:25203709-25203728 | MS.gene84852:CDS | 40.0% |
!! | GACAATGAAAGTGATGATGG+TGG | - | chr1.2:25202144-25202163 | MS.gene84852:CDS | 40.0% |
!! | TTATTTCTGCTTTGGCGATG+TGG | - | chr1.2:25203115-25203134 | MS.gene84852:CDS | 40.0% |
!! | TTTTGGGTCTGTAGTGAACA+CGG | + | chr1.2:25202698-25202717 | None:intergenic | 40.0% |
!!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr1.2:25203176-25203195 | MS.gene84852:CDS | 40.0% |
AGAAAGATGCTCAGTGCTTG+CGG | + | chr1.2:25204773-25204792 | None:intergenic | 45.0% | |
AGTGAAGGTCATGCTAGTGA+AGG | - | chr1.2:25202312-25202331 | MS.gene84852:intron | 45.0% | |
CAAAGGGAGGCAAATCAAAG+AGG | - | chr1.2:25204737-25204756 | MS.gene84852:intron | 45.0% | |
CAGCCAGACAAAATCACCAA+CGG | + | chr1.2:25203182-25203201 | None:intergenic | 45.0% | |
CATGCTAGCCAAAAAGACGT+GGG | - | chr1.2:25205012-25205031 | MS.gene84852:CDS | 45.0% | |
CGAGGCTGCTGAAATCTATA+CGG | - | chr1.2:25203817-25203836 | MS.gene84852:CDS | 45.0% | |
CTTGTTGCGTTGGACGAAAA+AGG | - | chr1.2:25204099-25204118 | MS.gene84852:intron | 45.0% | |
GAAAGGAAAAGAAGAACGCG+TGG | - | chr1.2:25205441-25205460 | MS.gene84852:CDS | 45.0% | |
GAAAGTGAAGGTGATGAAGG+TGG | - | chr1.2:25202264-25202283 | MS.gene84852:intron | 45.0% | |
GAAGATATTCAAGCTGGGTC+GGG | - | chr1.2:25205760-25205779 | MS.gene84852:CDS | 45.0% | |
GATGAAGGTGAACGTGATGA+AGG | - | chr1.2:25202237-25202256 | MS.gene84852:intron | 45.0% | |
GCAGTATGTATGCAACAAGC+AGG | - | chr1.2:25202587-25202606 | MS.gene84852:CDS | 45.0% | |
GCAGTTGTAACAGATGGTGA+CGG | - | chr1.2:25203320-25203339 | MS.gene84852:CDS | 45.0% | |
GGAAGATATTCAAGCTGGGT+CGG | - | chr1.2:25205759-25205778 | MS.gene84852:CDS | 45.0% | |
GGTACACCGGAACATGATTA+CGG | - | chr1.2:25201946-25201965 | MS.gene84852:CDS | 45.0% | |
GGTGATGAAAGTGAAGGTCA+TGG | - | chr1.2:25202303-25202322 | MS.gene84852:intron | 45.0% | |
TACCTGCGTGACGATTTCTT+TGG | - | chr1.2:25203596-25203615 | MS.gene84852:CDS | 45.0% | |
TAGTCAAAGCGAGGTTGTCA+AGG | - | chr1.2:25205236-25205255 | MS.gene84852:CDS | 45.0% | |
TGATTACGGTTCTACGGATG+TGG | - | chr1.2:25201960-25201979 | MS.gene84852:CDS | 45.0% | |
TGGCTAGCATGCTAAGACAT+GGG | + | chr1.2:25205003-25205022 | None:intergenic | 45.0% | |
TTCTATGAGGGAGGCGATAA+AGG | - | chr1.2:25203343-25203362 | MS.gene84852:CDS | 45.0% | |
TTCTTAGTGAACCCAACACC+GGG | + | chr1.2:25202912-25202931 | None:intergenic | 45.0% | |
TTGGCTAGCATGCTAAGACA+TGG | + | chr1.2:25205004-25205023 | None:intergenic | 45.0% | |
TTTCAAACGTCCGTCATCAG+TGG | + | chr1.2:25203060-25203079 | None:intergenic | 45.0% | |
! | AGTGAAGGTCATGGTAGTGA+AGG | - | chr1.2:25202357-25202376 | MS.gene84852:CDS | 45.0% |
! | AGTGTCTGCGGAACATTTTC+TGG | + | chr1.2:25204455-25204474 | None:intergenic | 45.0% |
! | ATGGCCTTGAGAACAATCCA+TGG | - | chr1.2:25203531-25203550 | MS.gene84852:CDS | 45.0% |
! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr1.2:25202761-25202780 | None:intergenic | 45.0% |
! | GCAGCACAGGTCTTTTTCTT+TGG | + | chr1.2:25204958-25204977 | None:intergenic | 45.0% |
! | TAGCTTGTATGCTGATGTGC+TGG | - | chr1.2:25204246-25204265 | MS.gene84852:intron | 45.0% |
! | TAGGGCATCAAGGAGACTAA+TGG | - | chr1.2:25205476-25205495 | MS.gene84852:CDS | 45.0% |
! | TGCACATCATTGGTTGGAGT+AGG | + | chr1.2:25202768-25202787 | None:intergenic | 45.0% |
! | TGGCCTTGAGAACAATCCAT+GGG | - | chr1.2:25203532-25203551 | MS.gene84852:CDS | 45.0% |
!! | AGATGGTGACGGTTCTATGA+GGG | - | chr1.2:25203331-25203350 | MS.gene84852:CDS | 45.0% |
!! | AGTGATGATGGTGGTTGTTC+TGG | - | chr1.2:25202153-25202172 | MS.gene84852:CDS | 45.0% |
!! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr1.2:25203226-25203245 | MS.gene84852:CDS | 45.0% |
!! | CAAGCACTGAGCATCTTTCT+GGG | - | chr1.2:25204773-25204792 | MS.gene84852:CDS | 45.0% |
!! | TGCAGGGAAGTGTCCAAAAA+GGG | - | chr1.2:25204223-25204242 | MS.gene84852:intron | 45.0% |
!! | TTGCAGGGAAGTGTCCAAAA+AGG | - | chr1.2:25204222-25204241 | MS.gene84852:intron | 45.0% |
AAAGGGAGGTAGTCAAAGCG+AGG | - | chr1.2:25205227-25205246 | MS.gene84852:CDS | 50.0% | |
AAGAGTGGATATCCCGGTGT+TGG | - | chr1.2:25202897-25202916 | MS.gene84852:CDS | 50.0% | |
AGACGTGGCAGGAGGATTAA+AGG | - | chr1.2:25205209-25205228 | MS.gene84852:CDS | 50.0% | |
AGACGTGGGAGAAGGATCAA+AGG | - | chr1.2:25204516-25204535 | MS.gene84852:intron | 50.0% | |
AGAGTGGATATCCCGGTGTT+GGG | - | chr1.2:25202898-25202917 | MS.gene84852:CDS | 50.0% | |
AGTCTCCTTGATGCCCTAAC+AGG | + | chr1.2:25205474-25205493 | None:intergenic | 50.0% | |
AGTGAAGGTGATGAAGGTGG+AGG | - | chr1.2:25202267-25202286 | MS.gene84852:intron | 50.0% | |
ATCCTTCTCCCACGTCTCTT+TGG | + | chr1.2:25204513-25204532 | None:intergenic | 50.0% | |
ATCCTTCTCCCACGTCTTTC+TGG | + | chr1.2:25204615-25204634 | None:intergenic | 50.0% | |
ATTGTCCATTGCCGCGACTT+TGG | + | chr1.2:25205596-25205615 | None:intergenic | 50.0% | |
CACCAAAGAAATCGTCACGC+AGG | + | chr1.2:25203601-25203620 | None:intergenic | 50.0% | |
CAGATGAGTTGTCAGCACAG+GGG | + | chr1.2:25203783-25203802 | None:intergenic | 50.0% | |
CAGCAATTCAGTGTTCGTGC+AGG | - | chr1.2:25203990-25204009 | MS.gene84852:CDS | 50.0% | |
CAGCACAGGGGATGAAAACT+TGG | + | chr1.2:25203771-25203790 | None:intergenic | 50.0% | |
CATAGACGATGACGCGTACT+TGG | + | chr1.2:25203377-25203396 | None:intergenic | 50.0% | |
CATGCTAGCCAGAAAGACGT+GGG | - | chr1.2:25204706-25204725 | MS.gene84852:intron | 50.0% | |
CCATTGCCAGTGAAGTGCAA+AGG | - | chr1.2:25204355-25204374 | MS.gene84852:intron | 50.0% | |
CCTGATAGCCAGAAAGACGT+GGG | - | chr1.2:25204604-25204623 | MS.gene84852:intron | 50.0% | |
CCTTTGCACTTCACTGGCAA+TGG | + | chr1.2:25204358-25204377 | None:intergenic | 50.0% | |
CTGCGTGACGATTTCTTTGG+TGG | - | chr1.2:25203599-25203618 | MS.gene84852:CDS | 50.0% | |
CTGGCAATGGATCACGTATG+TGG | + | chr1.2:25204345-25204364 | None:intergenic | 50.0% | |
GAAAAGAAGAACGCGTGGTG+AGG | - | chr1.2:25205446-25205465 | MS.gene84852:CDS | 50.0% | |
GACGTGGCAGGAGGATTAAA+GGG | - | chr1.2:25205210-25205229 | MS.gene84852:CDS | 50.0% | |
GACGTGGGAGAAGGATCAAA+GGG | - | chr1.2:25204517-25204536 | MS.gene84852:intron | 50.0% | |
GAGTGCTAGCCAAAAAGACG+TGG | - | chr1.2:25205194-25205213 | MS.gene84852:CDS | 50.0% | |
GATTTAGGAGGCCAAAGTCG+CGG | - | chr1.2:25205582-25205601 | MS.gene84852:CDS | 50.0% | |
GCAGATGAGTTGTCAGCACA+GGG | + | chr1.2:25203784-25203803 | None:intergenic | 50.0% | |
GCATGCTAGCCAAAAAGACG+TGG | - | chr1.2:25205011-25205030 | MS.gene84852:CDS | 50.0% | |
GCTCAGAAGAGTGGATATCC+CGG | - | chr1.2:25202891-25202910 | MS.gene84852:CDS | 50.0% | |
GGTGGAGGTGATGAAAGTGA+AGG | - | chr1.2:25202282-25202301 | MS.gene84852:intron | 50.0% | |
TACATGGTGGCTCAGAAGAG+TGG | - | chr1.2:25202882-25202901 | MS.gene84852:CDS | 50.0% | |
TATCCGATCGTTGTTGGGAG+TGG | - | chr1.2:25202000-25202019 | MS.gene84852:CDS | 50.0% | |
TATGAGGGAGGCGATAAAGG+CGG | - | chr1.2:25203346-25203365 | MS.gene84852:CDS | 50.0% | |
TCCCACGTCTCTTTGGCTAT+CGG | + | chr1.2:25204506-25204525 | None:intergenic | 50.0% | |
TGGCTAGCATGCTGAGACAT+GGG | + | chr1.2:25204697-25204716 | None:intergenic | 50.0% | |
TGGCTAGCATGCTGAGACAT+TGG | + | chr1.2:25204697-25204716 | None:intergenic | 50.0% | |
TGGCTATCAGGCTGAGACAT+GGG | + | chr1.2:25204595-25204614 | None:intergenic | 50.0% | |
TTGGCTAGCATGCTGAGACA+TGG | + | chr1.2:25205106-25205125 | None:intergenic | 50.0% | |
TTTCTTTGGGTGTCCTCCCT+TGG | + | chr1.2:25204944-25204963 | None:intergenic | 50.0% | |
! | AGGTGTTGCACTGAGTGTGA+AGG | - | chr1.2:25203877-25203896 | MS.gene84852:CDS | 50.0% |
! | ATCCTCCTCCCACGTCTTTT+TGG | + | chr1.2:25205023-25205042 | None:intergenic | 50.0% |
! | ATCCTCCTGCCACGTCTTTT+TGG | + | chr1.2:25205206-25205225 | None:intergenic | 50.0% |
! | ATGTTGACTGCTTGCAGCAC+AGG | + | chr1.2:25204971-25204990 | None:intergenic | 50.0% |
! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr1.2:25202670-25202689 | MS.gene84852:CDS | 50.0% |
!! | AGAAAGGTGCTCAGTGCTTG+CGG | + | chr1.2:25204569-25204588 | None:intergenic | 50.0% |
!! | CAGATGGTGACGGTTCTATG+AGG | - | chr1.2:25203330-25203349 | MS.gene84852:CDS | 50.0% |
!! | GCAAGCACTGAGCATCTTTC+TGG | - | chr1.2:25204772-25204791 | MS.gene84852:CDS | 50.0% |
!! | TGGCTAGCACTCTGAGACAT+AGG | + | chr1.2:25205186-25205205 | None:intergenic | 50.0% |
!!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr1.2:25203499-25203518 | MS.gene84852:CDS | 50.0% |
AGACGTGGGAGGAGGATCAA+AGG | - | chr1.2:25204720-25204739 | MS.gene84852:intron | 55.0% | |
AGCCAAAAAGACGTGGCAGG+AGG | - | chr1.2:25205201-25205220 | MS.gene84852:CDS | 55.0% | |
AGCCAAAAAGACGTGGGAGG+AGG | - | chr1.2:25205018-25205037 | MS.gene84852:CDS | 55.0% | |
AGCCAAAGAGACGTGGGAGA+AGG | - | chr1.2:25204508-25204527 | MS.gene84852:intron | 55.0% | |
AGCCAGAAAGACGTGGGAGA+AGG | - | chr1.2:25204610-25204629 | MS.gene84852:intron | 55.0% | |
ATCCTCCTCCCACGTCTTTC+TGG | + | chr1.2:25204717-25204736 | None:intergenic | 55.0% | |
ATTCAAGCTGGGTCGGGAAG+CGG | - | chr1.2:25205766-25205785 | MS.gene84852:CDS | 55.0% | |
CCACCACTCCCAACAACGAT+CGG | + | chr1.2:25202006-25202025 | None:intergenic | 55.0% | |
CCCACGTCTCTTTGGCTATC+GGG | + | chr1.2:25204505-25204524 | None:intergenic | 55.0% | |
CCCGATAGCCAAAGAGACGT+GGG | - | chr1.2:25204502-25204521 | MS.gene84852:intron | 55.0% | |
CGCAGATGAGTTGTCAGCAC+AGG | + | chr1.2:25203785-25203804 | None:intergenic | 55.0% | |
CGCGTCATCGTCTATGTGCT+TGG | - | chr1.2:25203381-25203400 | MS.gene84852:CDS | 55.0% | |
CTGGCTAGCATGCTGAGACA+TGG | + | chr1.2:25204698-25204717 | None:intergenic | 55.0% | |
CTGGCTATCAGGCTGAGACA+TGG | + | chr1.2:25204596-25204615 | None:intergenic | 55.0% | |
GACGTGGGAGGAGGATCAAA+GGG | - | chr1.2:25204721-25204740 | MS.gene84852:intron | 55.0% | |
GCATGCTAGCCAGAAAGACG+TGG | - | chr1.2:25204705-25204724 | MS.gene84852:intron | 55.0% | |
GCCTGATAGCCAGAAAGACG+TGG | - | chr1.2:25204603-25204622 | MS.gene84852:intron | 55.0% | |
GCTAGCCAAAAAGACGTGGC+AGG | - | chr1.2:25205198-25205217 | MS.gene84852:CDS | 55.0% | |
GCTAGCCAAAAAGACGTGGG+AGG | - | chr1.2:25205015-25205034 | MS.gene84852:CDS | 55.0% | |
GCTGAGACATGGGCACAGAA+AGG | + | chr1.2:25204585-25204604 | None:intergenic | 55.0% | |
GTGGCAGGAGGATTAAAGGG+AGG | - | chr1.2:25205213-25205232 | MS.gene84852:CDS | 55.0% | |
GTGGGAGAAGGATCAAAGGG+AGG | - | chr1.2:25204520-25204539 | MS.gene84852:intron | 55.0% | |
TAGTGAACACGGAGCCTAGC+TGG | + | chr1.2:25202687-25202706 | None:intergenic | 55.0% | |
TCTGCGTTGTCTTGAACGCG+AGG | - | chr1.2:25203799-25203818 | MS.gene84852:CDS | 55.0% | |
TGGCTATCGGGCTGAGACAT+GGG | + | chr1.2:25204493-25204512 | None:intergenic | 55.0% | |
TTGGCTATCGGGCTGAGACA+TGG | + | chr1.2:25204494-25204513 | None:intergenic | 55.0% | |
! | AGGCACCTGTTAGGGCATCA+AGG | - | chr1.2:25205466-25205485 | MS.gene84852:CDS | 55.0% |
! | GGAGCACCTTTGCACTTCAC+TGG | + | chr1.2:25204364-25204383 | None:intergenic | 55.0% |
!! | CCCACGTCTTTCTGGCTATC+AGG | + | chr1.2:25204607-25204626 | None:intergenic | 55.0% |
!! | GGGGACTTGGTGAGGGAAAA+TGG | - | chr1.2:25203512-25203531 | MS.gene84852:CDS | 55.0% |
!! | TGGTGACGGTTCTATGAGGG+AGG | - | chr1.2:25203334-25203353 | MS.gene84852:CDS | 55.0% |
!!! | AGTTTTGGGGGGACTTGGTG+AGG | - | chr1.2:25203504-25203523 | MS.gene84852:CDS | 55.0% |
!!! | GTTTTGGGGGGACTTGGTGA+GGG | - | chr1.2:25203505-25203524 | MS.gene84852:CDS | 55.0% |
AGACGTGGGAGGAGGATCCA+AGG | - | chr1.2:25205128-25205147 | MS.gene84852:CDS | 60.0% | |
AGCCAGAAAGACGTGGGAGG+AGG | - | chr1.2:25204712-25204731 | MS.gene84852:intron | 60.0% | |
CCGATCGTTGTTGGGAGTGG+TGG | - | chr1.2:25202003-25202022 | MS.gene84852:intron | 60.0% | |
GACGTGGGAGGAGGATCCAA+GGG | - | chr1.2:25205129-25205148 | MS.gene84852:CDS | 60.0% | |
GCCCGATAGCCAAAGAGACG+TGG | - | chr1.2:25204501-25204520 | MS.gene84852:intron | 60.0% | |
GCTAGCCAGAAAGACGTGGG+AGG | - | chr1.2:25204709-25204728 | MS.gene84852:intron | 60.0% | |
GTGGGAGGAGGATCAAAGGG+AGG | - | chr1.2:25204724-25204743 | MS.gene84852:intron | 60.0% | |
! | GCGTGGTGAGGCACCTGTTA+GGG | - | chr1.2:25205458-25205477 | MS.gene84852:CDS | 60.0% |
GGAGGCCAAAGTCGCGGCAA+TGG | - | chr1.2:25205588-25205607 | MS.gene84852:CDS | 65.0% | |
GTGGGAGGAGGATCCAAGGG+AGG | - | chr1.2:25205132-25205151 | MS.gene84852:CDS | 65.0% | |
! | CGCGTGGTGAGGCACCTGTT+AGG | - | chr1.2:25205457-25205476 | MS.gene84852:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 25201913 | 25205867 | 25201913 | ID=MS.gene84852 |
chr1.2 | mRNA | 25201913 | 25205867 | 25201913 | ID=MS.gene84852.t1;Parent=MS.gene84852 |
chr1.2 | exon | 25204762 | 25205867 | 25204762 | ID=MS.gene84852.t1.exon1;Parent=MS.gene84852.t1 |
chr1.2 | CDS | 25204762 | 25205867 | 25204762 | ID=cds.MS.gene84852.t1;Parent=MS.gene84852.t1 |
chr1.2 | exon | 25202853 | 25204101 | 25202853 | ID=MS.gene84852.t1.exon2;Parent=MS.gene84852.t1 |
chr1.2 | CDS | 25202853 | 25204101 | 25202853 | ID=cds.MS.gene84852.t1;Parent=MS.gene84852.t1 |
chr1.2 | exon | 25202496 | 25202768 | 25202496 | ID=MS.gene84852.t1.exon3;Parent=MS.gene84852.t1 |
chr1.2 | CDS | 25202496 | 25202768 | 25202496 | ID=cds.MS.gene84852.t1;Parent=MS.gene84852.t1 |
chr1.2 | exon | 25202318 | 25202398 | 25202318 | ID=MS.gene84852.t1.exon4;Parent=MS.gene84852.t1 |
chr1.2 | CDS | 25202318 | 25202398 | 25202318 | ID=cds.MS.gene84852.t1;Parent=MS.gene84852.t1 |
chr1.2 | exon | 25202111 | 25202191 | 25202111 | ID=MS.gene84852.t1.exon5;Parent=MS.gene84852.t1 |
chr1.2 | CDS | 25202111 | 25202191 | 25202111 | ID=cds.MS.gene84852.t1;Parent=MS.gene84852.t1 |
chr1.2 | exon | 25201913 | 25202020 | 25201913 | ID=MS.gene84852.t1.exon6;Parent=MS.gene84852.t1 |
chr1.2 | CDS | 25201913 | 25202020 | 25201913 | ID=cds.MS.gene84852.t1;Parent=MS.gene84852.t1 |
Gene Sequence |
Protein sequence |