Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85624.t1 | XP_024631492.1 | 95.7 | 530 | 20 | 2 | 1 | 530 | 1 | 527 | 3.90E-273 | 950.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85624.t1 | Q9LTS4 | 36.4 | 511 | 233 | 16 | 44 | 522 | 14 | 464 | 6.2e-54 | 213.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85624.t1 | G7IIK8 | 94.7 | 530 | 20 | 3 | 1 | 530 | 1 | 522 | 9.3e-269 | 935.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene85624.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85624.t1 | MTR_2g039620 | 94.717 | 530 | 20 | 3 | 1 | 530 | 1 | 522 | 0.0 | 943 |
| MS.gene85624.t1 | MTR_2g039620 | 95.683 | 417 | 15 | 2 | 114 | 530 | 4 | 417 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85624.t1 | AT5G56960 | 39.483 | 542 | 266 | 16 | 12 | 522 | 13 | 523 | 5.09e-90 | 286 |
| MS.gene85624.t1 | AT5G56960 | 35.630 | 508 | 241 | 15 | 44 | 522 | 14 | 464 | 3.77e-61 | 208 |
Find 93 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGTGTTGATTCGATTAT+TGG | 0.159842 | 2.1:+48382817 | MS.gene85624:CDS |
| ATCATGTGAGTCATATATTT+TGG | 0.239208 | 2.1:-48385422 | None:intergenic |
| GATGCTCTCACATTTGTCTT+TGG | 0.245611 | 2.1:+48380127 | MS.gene85624:CDS |
| GAATAGTCGTTTGTCCTTCT+TGG | 0.247039 | 2.1:+48380296 | MS.gene85624:intron |
| AAATATATACTTTGATAATA+TGG | 0.249981 | 2.1:-48380160 | None:intergenic |
| CAATTACCAAGTTCTTCTTT+AGG | 0.263208 | 2.1:+48380345 | MS.gene85624:CDS |
| AATTACCAAGTTCTTCTTTA+GGG | 0.266258 | 2.1:+48380346 | MS.gene85624:CDS |
| CTAAAATTAGACCCTATATT+AGG | 0.295005 | 2.1:-48381863 | None:intergenic |
| CCACTCTTCTCACTGCTTCC+TGG | 0.304864 | 2.1:-48385371 | None:intergenic |
| TCATTCTCAGTTTGTGTTGT+AGG | 0.328993 | 2.1:-48381716 | None:intergenic |
| CTTCCAAATGCACTAGCTTC+TGG | 0.330949 | 2.1:-48381821 | None:intergenic |
| TACTTCATCAAATAACCTTC+AGG | 0.345353 | 2.1:+48382918 | MS.gene85624:CDS |
| CATGATAAAAGTCCTAATAT+AGG | 0.347025 | 2.1:+48381851 | MS.gene85624:CDS |
| CTCCTTAGCTGTTATCAGTA+TGG | 0.357487 | 2.1:-48382558 | None:intergenic |
| AATATGAGAGATGAGTATTC+AGG | 0.359714 | 2.1:-48381539 | None:intergenic |
| CATCCAGAAGCTAGTGCATT+TGG | 0.365951 | 2.1:+48381818 | MS.gene85624:CDS |
| ATGGGACGAGGAAGCCTTCC+AGG | 0.369330 | 2.1:+48385353 | MS.gene85624:CDS |
| ATGATAAAAGTCCTAATATA+GGG | 0.378212 | 2.1:+48381852 | MS.gene85624:CDS |
| CTACTTAGAGCTACAACAAT+TGG | 0.379903 | 2.1:+48380784 | MS.gene85624:CDS |
| GGAGACATTGAGATCTTTGA+TGG | 0.383429 | 2.1:+48382577 | MS.gene85624:CDS |
| AGAATTGATGTCACAACAAT+TGG | 0.385231 | 2.1:+48382631 | MS.gene85624:CDS |
| CATTCTCAGTTTGTGTTGTA+GGG | 0.396646 | 2.1:-48381715 | None:intergenic |
| GGTAGTAGTGTGTTTGAAAC+AGG | 0.397618 | 2.1:-48381647 | None:intergenic |
| ACATGTCAACTTGGTTTCAA+TGG | 0.402871 | 2.1:+48382859 | MS.gene85624:CDS |
| ATCAAATAACCTTCAGGCTA+AGG | 0.429025 | 2.1:+48382924 | MS.gene85624:CDS |
| AATTCAGTTCTGACGGCTAC+AGG | 0.433952 | 2.1:-48380078 | None:intergenic |
| GAATATTTATTCCTCCAAGT+TGG | 0.443689 | 2.1:-48381613 | None:intergenic |
| CAATTGTTGTAGCTCTAAGT+AGG | 0.450587 | 2.1:-48380783 | None:intergenic |
| GGGGTGTAGATAGAACATTT+TGG | 0.464905 | 2.1:-48381757 | None:intergenic |
| AATATTTATTCCTCCAAGTT+GGG | 0.465125 | 2.1:-48381612 | None:intergenic |
| GGTAATTGTTGAAGTTGAAA+AGG | 0.465384 | 2.1:-48381668 | None:intergenic |
| TCACCTGATCCTACCCAACT+TGG | 0.482330 | 2.1:+48381599 | MS.gene85624:CDS |
| CGTTCTCTAATGCAATCTCT+TGG | 0.486499 | 2.1:+48380105 | MS.gene85624:CDS |
| AATTGTGTTGGTGTGATTTG+AGG | 0.486696 | 2.1:-48381689 | None:intergenic |
| CCTCCAAGTTGGGTAGGATC+AGG | 0.489579 | 2.1:-48381602 | None:intergenic |
| AGTCGTTTGTCCTTCTTGGA+TGG | 0.492248 | 2.1:+48380300 | MS.gene85624:intron |
| AACAAAGGAGAAATTGAGCT+TGG | 0.495316 | 2.1:+48381082 | MS.gene85624:CDS |
| AATTGAGGTGGAGAAGTTCC+AGG | 0.500124 | 2.1:-48381575 | None:intergenic |
| TCTTCTCACTGCTTCCTGGA+AGG | 0.503286 | 2.1:-48385367 | None:intergenic |
| ATTACTTCCTCAAGGAACTA+AGG | 0.503295 | 2.1:+48382054 | MS.gene85624:CDS |
| GTTGTAGGGAATAATTGTGT+TGG | 0.512655 | 2.1:-48381701 | None:intergenic |
| TTTACAGGAAGCAAGGATCA+AGG | 0.513199 | 2.1:+48380957 | MS.gene85624:intron |
| GTGTTTGAAACAGGTCTCAT+TGG | 0.519603 | 2.1:-48381638 | None:intergenic |
| AGAGATGAGTATTCAGGAGT+AGG | 0.522961 | 2.1:-48381533 | None:intergenic |
| AGAAGATGAATCAATGGTAG+TGG | 0.525040 | 2.1:+48382757 | MS.gene85624:CDS |
| TGCGCAGGCGGATATTCAAA+CGG | 0.526338 | 2.1:+48381400 | MS.gene85624:intron |
| TCAAGATCAACATGTCAACT+TGG | 0.527432 | 2.1:+48382850 | MS.gene85624:CDS |
| TTCATCAGAAGATGAATCAA+TGG | 0.532346 | 2.1:+48382751 | MS.gene85624:CDS |
| CTGAGTAATCCTTAGCCTGA+AGG | 0.534544 | 2.1:-48382933 | None:intergenic |
| AATTGTTGTAGCTCTAAGTA+GGG | 0.541165 | 2.1:-48380782 | None:intergenic |
| TTTATTCCTCCAAGTTGGGT+AGG | 0.547865 | 2.1:-48381608 | None:intergenic |
| ATTGAAGATGAAGATGAAGA+AGG | 0.551905 | 2.1:-48381485 | None:intergenic |
| TGATGAAGTAAATCATTCCC+TGG | 0.552419 | 2.1:-48382905 | None:intergenic |
| CCTGATCCTACCCAACTTGG+AGG | 0.553608 | 2.1:+48381602 | MS.gene85624:CDS |
| TTCCATACTGATAACAGCTA+AGG | 0.563069 | 2.1:+48382556 | MS.gene85624:CDS |
| GAGGTTGATGTTGATGAGAA+GGG | 0.565051 | 2.1:-48381778 | None:intergenic |
| TTTGAAACAGGTCTCATTGG+TGG | 0.575275 | 2.1:-48381635 | None:intergenic |
| TGAGGTTGATGTTGATGAGA+AGG | 0.576774 | 2.1:-48381779 | None:intergenic |
| ACACTCCCTAAAGAAGAACT+TGG | 0.577549 | 2.1:-48380351 | None:intergenic |
| ACAAATACAAATCATGCACC+AGG | 0.579495 | 2.1:+48382887 | MS.gene85624:CDS |
| ATGAGATCACTATCAACAGC+AGG | 0.579733 | 2.1:+48381506 | MS.gene85624:CDS |
| CTTAGAGCATTACTTCCTCA+AGG | 0.580881 | 2.1:+48382046 | MS.gene85624:CDS |
| CAGTTCTGACGGCTACAGGA+AGG | 0.586512 | 2.1:-48380074 | None:intergenic |
| CTTCAGGCTAAGGATTACTC+AGG | 0.589180 | 2.1:+48382934 | MS.gene85624:CDS |
| CGTTACATGCAAAACTTGAA+CGG | 0.589231 | 2.1:-48382720 | None:intergenic |
| ATGATGAAGTTGATTACTCG+AGG | 0.589833 | 2.1:-48381972 | None:intergenic |
| GACTTGCAAGTGAACGTGAT+GGG | 0.599132 | 2.1:+48382779 | MS.gene85624:CDS |
| CAAGAGATTGCATTAGAGAA+CGG | 0.600137 | 2.1:-48380104 | None:intergenic |
| AGTTCTGACGGCTACAGGAA+GGG | 0.603804 | 2.1:-48380073 | None:intergenic |
| GAAGATGAAGATGAAGAAGG+TGG | 0.605441 | 2.1:-48381482 | None:intergenic |
| AGGTTGATGTTGATGAGAAG+GGG | 0.605846 | 2.1:-48381777 | None:intergenic |
| ACGGATAAATTCAGTTCTGA+CGG | 0.607682 | 2.1:-48380085 | None:intergenic |
| ATTGTAGAAACCATCCAAGA+AGG | 0.610273 | 2.1:-48380310 | None:intergenic |
| GCAGATAAGTGAATGGGACG+AGG | 0.614362 | 2.1:+48385341 | MS.gene85624:intron |
| TCAACCTCAGCAAAATTATG+TGG | 0.614391 | 2.1:+48381793 | MS.gene85624:CDS |
| GTAGGATCAGGTGAAAATTG+AGG | 0.615518 | 2.1:-48381590 | None:intergenic |
| TGATTCCTAAAAGCTAGTCC+AGG | 0.617478 | 2.1:-48380755 | None:intergenic |
| TGATGAAGTTGATTACTCGA+GGG | 0.623889 | 2.1:-48381971 | None:intergenic |
| GTACGTACCTTAGTTCCTTG+AGG | 0.626837 | 2.1:-48382061 | None:intergenic |
| CTATATACCACATATATGGA+AGG | 0.632139 | 2.1:+48380042 | None:intergenic |
| CAGAAGCTAGTGCATTTGGA+AGG | 0.633413 | 2.1:+48381822 | MS.gene85624:CDS |
| AATGAGAGATCGAAATCAAG+CGG | 0.637236 | 2.1:+48381943 | MS.gene85624:CDS |
| GGATCAGGTGAAAATTGAGG+TGG | 0.639584 | 2.1:-48381587 | None:intergenic |
| TAAAAGCTAGTCCAGGAACA+CGG | 0.640221 | 2.1:-48380748 | None:intergenic |
| ATATTCAACATAAATCCACC+TGG | 0.642233 | 2.1:+48381557 | MS.gene85624:CDS |
| GATGAAGTTGATTACTCGAG+GGG | 0.643129 | 2.1:-48381970 | None:intergenic |
| CCAGGAAGCAGTGAGAAGAG+TGG | 0.648622 | 2.1:+48385371 | MS.gene85624:CDS |
| GGTTGATGTTGATGAGAAGG+GGG | 0.653653 | 2.1:-48381776 | None:intergenic |
| AATACAGACACAATTCTACC+AGG | 0.662180 | 2.1:+48380832 | MS.gene85624:CDS |
| TGACTTGATACAGTCCCAAG+TGG | 0.713861 | 2.1:+48385398 | MS.gene85624:CDS |
| TGAGGTGGAGAAGTTCCAGG+TGG | 0.714377 | 2.1:-48381572 | None:intergenic |
| GGACTTGCAAGTGAACGTGA+TGG | 0.716456 | 2.1:+48382778 | MS.gene85624:CDS |
| CAAATACAAATCATGCACCA+GGG | 0.722090 | 2.1:+48382888 | MS.gene85624:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr2.1:48384328-48384309 | None:intergenic | 0.0% |
| !! | AAAGTTTATTGTAATTAAAT+TGG | + | chr2.1:48380447-48380466 | MS.gene85624:intron | 10.0% |
| !! | AAATAAAAAAATAAAATACG+CGG | + | chr2.1:48382324-48382343 | MS.gene85624:intron | 10.0% |
| !! | CAAAAAAAAAAATTATAAAC+GGG | - | chr2.1:48383269-48383288 | None:intergenic | 10.0% |
| !! | CCAAAAAAAAAAATTATAAA+CGG | - | chr2.1:48383270-48383289 | None:intergenic | 10.0% |
| !!! | AAATATATACTTTGATAATA+TGG | - | chr2.1:48380163-48380182 | None:intergenic | 10.0% |
| !!! | ATTTTCAAATTTTTCAAAAA+TGG | + | chr2.1:48383677-48383696 | MS.gene85624:intron | 10.0% |
| !!! | TATTTTTTTATTTACAACAT+TGG | - | chr2.1:48382317-48382336 | None:intergenic | 10.0% |
| !! | ATATTGTTTCGTTAAAAATT+AGG | + | chr2.1:48381177-48381196 | MS.gene85624:intron | 15.0% |
| !! | ATTAATTCGTGAAATAATTA+AGG | + | chr2.1:48382994-48383013 | MS.gene85624:intron | 15.0% |
| !! | TATTGTTTCGTTAAAAATTA+GGG | + | chr2.1:48381178-48381197 | MS.gene85624:intron | 15.0% |
| !! | TTAATTCGTGAAATAATTAA+GGG | + | chr2.1:48382995-48383014 | MS.gene85624:intron | 15.0% |
| !! | TTCAATACTTGTATATATTA+TGG | + | chr2.1:48380905-48380924 | MS.gene85624:intron | 15.0% |
| !!! | AGTTTAGAATATAATAATGT+AGG | - | chr2.1:48380206-48380225 | None:intergenic | 15.0% |
| !!! | ATTCTTTTTTTTTTTTTTGC+CGG | + | chr2.1:48380495-48380514 | MS.gene85624:intron | 15.0% |
| !!! | ATTGGTTTATGTATAAAAAT+TGG | - | chr2.1:48385121-48385140 | None:intergenic | 15.0% |
| !!! | CCGTTTATAATTTTTTTTTT+TGG | + | chr2.1:48383267-48383286 | MS.gene85624:intron | 15.0% |
| !!! | GTAAATAATTTTCTTTCATT+AGG | - | chr2.1:48380872-48380891 | None:intergenic | 15.0% |
| !! | AAATTATAAACTAACTCAAC+AGG | - | chr2.1:48384123-48384142 | None:intergenic | 20.0% |
| !! | AAGTTATTAACGTTACAATT+TGG | + | chr2.1:48384608-48384627 | MS.gene85624:intron | 20.0% |
| !! | AAGTTATTAACGTTACAATT+TGG | - | chr2.1:48384627-48384608 | None:intergenic | 20.0% |
| !! | AATTGTAACGTAATAACTTA+TGG | - | chr2.1:48384667-48384686 | None:intergenic | 20.0% |
| !! | ACATATAATGTAAATGTTGT+CGG | + | chr2.1:48381151-48381170 | MS.gene85624:intron | 20.0% |
| !! | ATGATAAAAGTCCTAATATA+GGG | + | chr2.1:48381852-48381871 | MS.gene85624:CDS | 20.0% |
| !! | ATTGTAACGTAATAACTTAT+GGG | - | chr2.1:48384666-48384685 | None:intergenic | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+TGG | + | chr2.1:48384855-48384874 | MS.gene85624:intron | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+TGG | - | chr2.1:48384874-48384855 | None:intergenic | 20.0% |
| !! | GAAACCAAAAAATAAGTTAA+GGG | + | chr2.1:48384827-48384846 | MS.gene85624:intron | 20.0% |
| !! | GAAACCAAAAAATAAGTTAA+GGG | - | chr2.1:48384846-48384827 | None:intergenic | 20.0% |
| !! | TAAGTTATTACGTTACAATT+TGG | + | chr2.1:48384667-48384686 | MS.gene85624:intron | 20.0% |
| !! | TAATCTATACTCTACAAAAT+AGG | - | chr2.1:48382366-48382385 | None:intergenic | 20.0% |
| !! | TAATTCGTGAAATAATTAAG+GGG | + | chr2.1:48382996-48383015 | MS.gene85624:intron | 20.0% |
| !! | TACAACTTCAAATATACTAT+TGG | + | chr2.1:48383863-48383882 | MS.gene85624:intron | 20.0% |
| !! | TAGAATATAATAATGTAGGT+AGG | - | chr2.1:48380202-48380221 | None:intergenic | 20.0% |
| !! | TGATTATAAAACAACATGAT+GGG | - | chr2.1:48382099-48382118 | None:intergenic | 20.0% |
| !! | TTAGAAAAAGACATTTCTTA+AGG | - | chr2.1:48380616-48380635 | None:intergenic | 20.0% |
| !! | TTGATTATAAAACAACATGA+TGG | - | chr2.1:48382100-48382119 | None:intergenic | 20.0% |
| !! | TTGTAACGTTAATAACTTAT+GGG | + | chr2.1:48384856-48384875 | MS.gene85624:intron | 20.0% |
| !! | TTGTAACGTTAATAACTTAT+GGG | - | chr2.1:48384875-48384856 | None:intergenic | 20.0% |
| !! | TTTAGGCTTAATTAATGATT+TGG | + | chr2.1:48384548-48384567 | MS.gene85624:intron | 20.0% |
| !!! | AACAGTTGTTTAAATTTTGA+CGG | - | chr2.1:48383578-48383597 | None:intergenic | 20.0% |
| !!! | AATTTTCATCGACATAATAA+TGG | - | chr2.1:48383830-48383849 | None:intergenic | 20.0% |
| !!! | AATTTTTGCACTTATAACTA+TGG | - | chr2.1:48383152-48383171 | None:intergenic | 20.0% |
| !!! | ACAACTTGGTTTTTTTTTTT+TGG | + | chr2.1:48380274-48380293 | MS.gene85624:intron | 20.0% |
| !!! | AGAAGAATATTAATCAGTTT+TGG | + | chr2.1:48385309-48385328 | MS.gene85624:intron | 20.0% |
| !!! | ATTTTCATCGACATAATAAT+GGG | - | chr2.1:48383829-48383848 | None:intergenic | 20.0% |
| !!! | ATTTTTGCACTTATAACTAT+GGG | - | chr2.1:48383151-48383170 | None:intergenic | 20.0% |
| !!! | CAAATATACTATTGGTTAAA+AGG | + | chr2.1:48383871-48383890 | MS.gene85624:intron | 20.0% |
| !!! | TAATTAGGTTTTGAAAATAG+TGG | + | chr2.1:48383769-48383788 | MS.gene85624:intron | 20.0% |
| !!! | TATTGGCTTAATTAATGATT+TGG | - | chr2.1:48384974-48384993 | None:intergenic | 20.0% |
| !!! | TGAAAAAGTGAATTCTATTT+TGG | + | chr2.1:48383996-48384015 | MS.gene85624:intron | 20.0% |
| !!! | TGATCTTATATCTAGAATAA+TGG | - | chr2.1:48383508-48383527 | None:intergenic | 20.0% |
| !!! | TGCTTACATGTTTAAAATAT+TGG | - | chr2.1:48384991-48385010 | None:intergenic | 20.0% |
| !!! | TTCAAATTTTTCAAAAATGG+TGG | + | chr2.1:48383680-48383699 | MS.gene85624:intron | 20.0% |
| !!! | TTGATTTAACCACATTTTTT+CGG | + | chr2.1:48381376-48381395 | MS.gene85624:intron | 20.0% |
| ! | AATATTTATTCCTCCAAGTT+GGG | - | chr2.1:48381615-48381634 | None:intergenic | 25.0% |
| ! | AATCGTTTGCAAGAAAAAAT+TGG | - | chr2.1:48382223-48382242 | None:intergenic | 25.0% |
| ! | AATTACCAAGTTCTTCTTTA+GGG | + | chr2.1:48380346-48380365 | MS.gene85624:CDS | 25.0% |
| ! | AGAGACATTAAAAATCTTGA+CGG | - | chr2.1:48382180-48382199 | None:intergenic | 25.0% |
| ! | ATATAATAATGTAGGTAGGT+AGG | - | chr2.1:48380198-48380217 | None:intergenic | 25.0% |
| ! | ATATTATGGTTATGTTGCTA+AGG | + | chr2.1:48380919-48380938 | MS.gene85624:intron | 25.0% |
| ! | ATGCATAATTATGTACCATA+AGG | + | chr2.1:48382119-48382138 | MS.gene85624:intron | 25.0% |
| ! | CATGATAAAAGTCCTAATAT+AGG | + | chr2.1:48381851-48381870 | MS.gene85624:CDS | 25.0% |
| ! | CCATAAGTTATTAGAGTTAA+GGG | - | chr2.1:48384767-48384786 | None:intergenic | 25.0% |
| ! | CCTTAACTCTAATAACTTAT+GGG | + | chr2.1:48384765-48384784 | MS.gene85624:intron | 25.0% |
| ! | CGAAACCAAAAAATAAGTTA+AGG | + | chr2.1:48384826-48384845 | MS.gene85624:intron | 25.0% |
| ! | CGAAACCAAAAAATAAGTTA+AGG | - | chr2.1:48384845-48384826 | None:intergenic | 25.0% |
| ! | CTAAAATTAGACCCTATATT+AGG | - | chr2.1:48381866-48381885 | None:intergenic | 25.0% |
| ! | GAAACCAACAAATAAGTTAA+GGG | + | chr2.1:48384796-48384815 | MS.gene85624:intron | 25.0% |
| ! | GAAACCAACAAATAAGTTAA+GGG | - | chr2.1:48384815-48384796 | None:intergenic | 25.0% |
| ! | GATAATACACTCAGATAATT+AGG | + | chr2.1:48383754-48383773 | MS.gene85624:intron | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | + | chr2.1:48384887-48384906 | MS.gene85624:intron | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | - | chr2.1:48384906-48384887 | None:intergenic | 25.0% |
| ! | GTTGATTAAGTATTTATCCA+CGG | + | chr2.1:48383595-48383614 | MS.gene85624:intron | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | + | chr2.1:48384886-48384905 | MS.gene85624:intron | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | - | chr2.1:48384905-48384886 | None:intergenic | 25.0% |
| ! | TTCAAAAACATTGTTCCTTA+TGG | - | chr2.1:48382137-48382156 | None:intergenic | 25.0% |
| ! | TTCGTTAAAAATTAGGGAAA+AGG | + | chr2.1:48381184-48381203 | MS.gene85624:intron | 25.0% |
| !! | AACAGCTTTTTAATCAATAC+AGG | + | chr2.1:48380379-48380398 | MS.gene85624:CDS | 25.0% |
| !! | ATAGAGAATTTTCAGTTTCT+TGG | - | chr2.1:48380995-48381014 | None:intergenic | 25.0% |
| !! | TATACTATTGGTTAAAAGGA+AGG | + | chr2.1:48383875-48383894 | MS.gene85624:intron | 25.0% |
| !! | TATATGACTTGTGTAATCTT+TGG | - | chr2.1:48383970-48383989 | None:intergenic | 25.0% |
| !! | TGTGAGTGTATGAATATTTT+AGG | + | chr2.1:48384531-48384550 | MS.gene85624:intron | 25.0% |
| !! | TTTTCATCGACATAATAATG+GGG | - | chr2.1:48383828-48383847 | None:intergenic | 25.0% |
| !!! | AGAATATTAATCAGTTTTGG+TGG | + | chr2.1:48385312-48385331 | MS.gene85624:intron | 25.0% |
| !!! | ATTACCGACTTATGTAAATA+AGG | - | chr2.1:48383657-48383676 | None:intergenic | 25.0% |
| !!! | ATTGCCTTATTTACATAAGT+CGG | + | chr2.1:48383650-48383669 | MS.gene85624:intron | 25.0% |
| !!! | ATTGTTGTTAGAGTTTTGAA+CGG | - | chr2.1:48383346-48383365 | None:intergenic | 25.0% |
| !!! | CATTTTTGAAAGAGTTCAAT+TGG | - | chr2.1:48385139-48385158 | None:intergenic | 25.0% |
| !!! | CTAACATTCATGTTTTTTGT+CGG | - | chr2.1:48382456-48382475 | None:intergenic | 25.0% |
| !!! | CTTATTTTTTGGTTTCGTTT+TGG | + | chr2.1:48384698-48384717 | MS.gene85624:intron | 25.0% |
| !!! | CTTATTTTTTGGTTTCGTTT+TGG | - | chr2.1:48384717-48384698 | None:intergenic | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | + | chr2.1:48384579-48384598 | MS.gene85624:intron | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | - | chr2.1:48384598-48384579 | None:intergenic | 25.0% |
| !!! | TAGCATGTTTTTGTTTTTAC+AGG | + | chr2.1:48380942-48380961 | MS.gene85624:intron | 25.0% |
| !!! | TTTTTTGCAGATAAGTGAAT+GGG | + | chr2.1:48385335-48385354 | MS.gene85624:intron | 25.0% |
| AAGAAAGAGTAGTAAACTTG+TGG | + | chr2.1:48384092-48384111 | MS.gene85624:intron | 30.0% | |
| AATATGAGAGATGAGTATTC+AGG | - | chr2.1:48381542-48381561 | None:intergenic | 30.0% | |
| AGAATTGATGTCACAACAAT+TGG | + | chr2.1:48382631-48382650 | MS.gene85624:CDS | 30.0% | |
| ATAATGTCACAAGCTTATTG+TGG | - | chr2.1:48383383-48383402 | None:intergenic | 30.0% | |
| ATATTCAACATAAATCCACC+TGG | + | chr2.1:48381557-48381576 | MS.gene85624:CDS | 30.0% | |
| ATGTAAATAAGGCAATTGCT+AGG | - | chr2.1:48383646-48383665 | None:intergenic | 30.0% | |
| ATTGAAGATGAAGATGAAGA+AGG | - | chr2.1:48381488-48381507 | None:intergenic | 30.0% | |
| CAATTACCAAGTTCTTCTTT+AGG | + | chr2.1:48380345-48380364 | MS.gene85624:CDS | 30.0% | |
| CATACCACAAAATCTTCATT+AGG | + | chr2.1:48385257-48385276 | MS.gene85624:intron | 30.0% | |
| CATTAGGTGAGGAAAAAAAT+TGG | + | chr2.1:48385273-48385292 | MS.gene85624:intron | 30.0% | |
| CCCATAAGTTATTAGAGTTA+AGG | - | chr2.1:48384768-48384787 | None:intergenic | 30.0% | |
| CCCTTAACTCTAATAACTTA+TGG | + | chr2.1:48384764-48384783 | MS.gene85624:intron | 30.0% | |
| CGAAACCAACAAATAAGTTA+AGG | + | chr2.1:48384795-48384814 | MS.gene85624:intron | 30.0% | |
| CGAAACCAACAAATAAGTTA+AGG | - | chr2.1:48384814-48384795 | None:intergenic | 30.0% | |
| GAAAACAAAAGAGTTTCTGA+TGG | - | chr2.1:48380587-48380606 | None:intergenic | 30.0% | |
| GAATAAAGTTCAAATTCCCT+TGG | - | chr2.1:48381309-48381328 | None:intergenic | 30.0% | |
| GAATATTTATTCCTCCAAGT+TGG | - | chr2.1:48381616-48381635 | None:intergenic | 30.0% | |
| GGTAATTGTTGAAGTTGAAA+AGG | - | chr2.1:48381671-48381690 | None:intergenic | 30.0% | |
| GTAAAGATCTCATGATCTAA+CGG | - | chr2.1:48380674-48380693 | None:intergenic | 30.0% | |
| TACCATTTGAACTGTACTTA+CGG | - | chr2.1:48381214-48381233 | None:intergenic | 30.0% | |
| TACTTCATCAAATAACCTTC+AGG | + | chr2.1:48382918-48382937 | MS.gene85624:CDS | 30.0% | |
| TATTAGAAGCGAGAAATCAT+GGG | - | chr2.1:48381272-48381291 | None:intergenic | 30.0% | |
| TCTATACTCTACAAAATAGG+TGG | - | chr2.1:48382363-48382382 | None:intergenic | 30.0% | |
| TGTAAATAAGGCAATTGCTA+GGG | - | chr2.1:48383645-48383664 | None:intergenic | 30.0% | |
| TTCATCAGAAGATGAATCAA+TGG | + | chr2.1:48382751-48382770 | MS.gene85624:CDS | 30.0% | |
| TTGATTGTGCTTATACAACT+TGG | + | chr2.1:48380260-48380279 | MS.gene85624:intron | 30.0% | |
| ! | ATAGTCTTTTTACAACTCCA+AGG | + | chr2.1:48381289-48381308 | MS.gene85624:intron | 30.0% |
| ! | GTATTTTATATGGTATACCG+TGG | - | chr2.1:48383615-48383634 | None:intergenic | 30.0% |
| ! | TAGTCTTTTTACAACTCCAA+GGG | + | chr2.1:48381290-48381309 | MS.gene85624:intron | 30.0% |
| ! | TTATATAGTATGTCGCTTGA+TGG | - | chr2.1:48384278-48384297 | None:intergenic | 30.0% |
| ! | TTGATCAATGATGATGACAA+AGG | - | chr2.1:48385202-48385221 | None:intergenic | 30.0% |
| !! | AATTGTTGTAGCTCTAAGTA+GGG | - | chr2.1:48380785-48380804 | None:intergenic | 30.0% |
| !! | TGATGTGTTGATTCGATTAT+TGG | + | chr2.1:48382817-48382836 | MS.gene85624:CDS | 30.0% |
| !!! | CTTATTTGTTGGTTTCGTTT+TGG | + | chr2.1:48384729-48384748 | MS.gene85624:intron | 30.0% |
| !!! | CTTATTTGTTGGTTTCGTTT+TGG | - | chr2.1:48384748-48384729 | None:intergenic | 30.0% |
| !!! | GGGTGGAAAAGTATTTTATA+TGG | - | chr2.1:48383625-48383644 | None:intergenic | 30.0% |
| !!! | GTTTTTTGCAGATAAGTGAA+TGG | + | chr2.1:48385334-48385353 | MS.gene85624:intron | 30.0% |
| !!! | TCATATATTTTGGTCCACTT+GGG | - | chr2.1:48385415-48385434 | None:intergenic | 30.0% |
| !!! | TGGTCCCTTAACTTATTTTT+TGG | + | chr2.1:48384687-48384706 | MS.gene85624:intron | 30.0% |
| !!! | TGGTCCCTTAACTTATTTTT+TGG | - | chr2.1:48384706-48384687 | None:intergenic | 30.0% |
| !!! | TTAGGTTTTGAAAATAGTGG+CGG | + | chr2.1:48383772-48383791 | MS.gene85624:intron | 30.0% |
| !!! | TTTCAGACTGTTGTTTTCAT+GGG | + | chr2.1:48381055-48381074 | MS.gene85624:intron | 30.0% |
| !!! | TTTTCAGACTGTTGTTTTCA+TGG | + | chr2.1:48381054-48381073 | MS.gene85624:intron | 30.0% |
| !!! | TTTTGTTTTTACAGGAAGCA+AGG | + | chr2.1:48380950-48380969 | MS.gene85624:intron | 30.0% |
| !!! | TTTTTGGTTAGCAAAATGCT+AGG | + | chr2.1:48383283-48383302 | MS.gene85624:intron | 30.0% |
| AAAATAACGTGACGTTACTC+AGG | - | chr2.1:48384181-48384200 | None:intergenic | 35.0% | |
| AAACATTATGTTGATCCGAG+TGG | + | chr2.1:48382255-48382274 | MS.gene85624:intron | 35.0% | |
| AACAAAGGAGAAATTGAGCT+TGG | + | chr2.1:48381082-48381101 | MS.gene85624:CDS | 35.0% | |
| AATACAGACACAATTCTACC+AGG | + | chr2.1:48380832-48380851 | MS.gene85624:CDS | 35.0% | |
| AATGAGAGATCGAAATCAAG+CGG | + | chr2.1:48381943-48381962 | MS.gene85624:CDS | 35.0% | |
| ACAAATACAAATCATGCACC+AGG | + | chr2.1:48382887-48382906 | MS.gene85624:CDS | 35.0% | |
| ACATGTCAACTTGGTTTCAA+TGG | + | chr2.1:48382859-48382878 | MS.gene85624:CDS | 35.0% | |
| ACCATTTGAACTGTACTTAC+GGG | - | chr2.1:48381213-48381232 | None:intergenic | 35.0% | |
| AGAAGATGAATCAATGGTAG+TGG | + | chr2.1:48382757-48382776 | MS.gene85624:CDS | 35.0% | |
| AGCACAATCAACAACTACTA+TGG | - | chr2.1:48380251-48380270 | None:intergenic | 35.0% | |
| ATCAAATAACCTTCAGGCTA+AGG | + | chr2.1:48382924-48382943 | MS.gene85624:CDS | 35.0% | |
| ATTACTTCCTCAAGGAACTA+AGG | + | chr2.1:48382054-48382073 | MS.gene85624:CDS | 35.0% | |
| ATTGTAGAAACCATCCAAGA+AGG | - | chr2.1:48380313-48380332 | None:intergenic | 35.0% | |
| CAAATACAAATCATGCACCA+GGG | + | chr2.1:48382888-48382907 | MS.gene85624:CDS | 35.0% | |
| CAAGAGATTGCATTAGAGAA+CGG | - | chr2.1:48380107-48380126 | None:intergenic | 35.0% | |
| CACAAAATCTTCATTAGGTG+AGG | + | chr2.1:48385262-48385281 | MS.gene85624:intron | 35.0% | |
| CAGTTCAAATGGTAAAAGAC+TGG | + | chr2.1:48381220-48381239 | MS.gene85624:intron | 35.0% | |
| CATTCTCAGTTTGTGTTGTA+GGG | - | chr2.1:48381718-48381737 | None:intergenic | 35.0% | |
| CGTTACATGCAAAACTTGAA+CGG | - | chr2.1:48382723-48382742 | None:intergenic | 35.0% | |
| CTACTCTTTCTTTACGATTG+AGG | - | chr2.1:48384084-48384103 | None:intergenic | 35.0% | |
| CTACTTAGAGCTACAACAAT+TGG | + | chr2.1:48380784-48380803 | MS.gene85624:CDS | 35.0% | |
| CTATTAGAAGCGAGAAATCA+TGG | - | chr2.1:48381273-48381292 | None:intergenic | 35.0% | |
| GAGATACTAATTAGGTCGAT+TGG | + | chr2.1:48383924-48383943 | MS.gene85624:intron | 35.0% | |
| GAGTCTGTCAATTGTCAATT+TGG | + | chr2.1:48384230-48384249 | MS.gene85624:intron | 35.0% | |
| GTCTGTCTTGAAAAATCTTC+AGG | - | chr2.1:48381443-48381462 | None:intergenic | 35.0% | |
| GTGTGCTTGAGATACTAATT+AGG | + | chr2.1:48383916-48383935 | MS.gene85624:intron | 35.0% | |
| GTTGTAGGGAATAATTGTGT+TGG | - | chr2.1:48381704-48381723 | None:intergenic | 35.0% | |
| TAGAGTTAAGGGAGTAGTTT+GGG | - | chr2.1:48384756-48384775 | None:intergenic | 35.0% | |
| TAGGACAACAAGTATTAACC+TGG | - | chr2.1:48380853-48380872 | None:intergenic | 35.0% | |
| TCAACCTCAGCAAAATTATG+TGG | + | chr2.1:48381793-48381812 | MS.gene85624:CDS | 35.0% | |
| TCAAGATCAACATGTCAACT+TGG | + | chr2.1:48382850-48382869 | MS.gene85624:CDS | 35.0% | |
| TCATTCTCAGTTTGTGTTGT+AGG | - | chr2.1:48381719-48381738 | None:intergenic | 35.0% | |
| TGATGAAGTAAATCATTCCC+TGG | - | chr2.1:48382908-48382927 | None:intergenic | 35.0% | |
| TGGTCCCTTAACTTATTTGT+TGG | + | chr2.1:48384718-48384737 | MS.gene85624:intron | 35.0% | |
| TGGTCCCTTAACTTATTTGT+TGG | - | chr2.1:48384737-48384718 | None:intergenic | 35.0% | |
| TGGTCCCTTAAGTTATTTGT+TGG | + | chr2.1:48384568-48384587 | MS.gene85624:intron | 35.0% | |
| TGGTCCCTTAAGTTATTTGT+TGG | - | chr2.1:48384587-48384568 | None:intergenic | 35.0% | |
| TTAGAGTTAAGGGAGTAGTT+TGG | - | chr2.1:48384757-48384776 | None:intergenic | 35.0% | |
| TTCCATACTGATAACAGCTA+AGG | + | chr2.1:48382556-48382575 | MS.gene85624:CDS | 35.0% | |
| ! | AATTGTGTTGGTGTGATTTG+AGG | - | chr2.1:48381692-48381711 | None:intergenic | 35.0% |
| ! | ACGGATAAATTCAGTTCTGA+CGG | - | chr2.1:48380088-48380107 | None:intergenic | 35.0% |
| ! | ATGATGAAGTTGATTACTCG+AGG | - | chr2.1:48381975-48381994 | None:intergenic | 35.0% |
| ! | CTCACCTAATGAAGATTTTG+TGG | - | chr2.1:48385264-48385283 | None:intergenic | 35.0% |
| ! | TGACTTGTGTAATCTTTGGA+AGG | - | chr2.1:48383966-48383985 | None:intergenic | 35.0% |
| ! | TGATGAAGTTGATTACTCGA+GGG | - | chr2.1:48381974-48381993 | None:intergenic | 35.0% |
| !! | CAATTGTTGTAGCTCTAAGT+AGG | - | chr2.1:48380786-48380805 | None:intergenic | 35.0% |
| !! | CGTTCAAGTTTTGCATGTAA+CGG | + | chr2.1:48382721-48382740 | MS.gene85624:CDS | 35.0% |
| !! | GTTCAAGTTTTGCATGTAAC+GGG | + | chr2.1:48382722-48382741 | MS.gene85624:CDS | 35.0% |
| !! | TTCAAGTTTTGCATGTAACG+GGG | + | chr2.1:48382723-48382742 | MS.gene85624:CDS | 35.0% |
| !!! | GAATTCTATTTTGGCAGCTA+CGG | + | chr2.1:48384005-48384024 | MS.gene85624:intron | 35.0% |
| !!! | TTCAGACTGTTGTTTTCATG+GGG | + | chr2.1:48381056-48381075 | MS.gene85624:intron | 35.0% |
| AAAGTGATCTCTCGTGAATC+CGG | - | chr2.1:48380517-48380536 | None:intergenic | 40.0% | |
| AAATAAGGCAATTGCTAGGG+TGG | - | chr2.1:48383642-48383661 | None:intergenic | 40.0% | |
| ACACTCCCTAAAGAAGAACT+TGG | - | chr2.1:48380354-48380373 | None:intergenic | 40.0% | |
| AGAGATGAGTATTCAGGAGT+AGG | - | chr2.1:48381536-48381555 | None:intergenic | 40.0% | |
| AGCATGTCTCATTGCAATGT+CGG | + | chr2.1:48385007-48385026 | MS.gene85624:intron | 40.0% | |
| ATCCTTTCTCACACTTGAGA+CGG | + | chr2.1:48383401-48383420 | MS.gene85624:intron | 40.0% | |
| ATGAGATCACTATCAACAGC+AGG | + | chr2.1:48381506-48381525 | MS.gene85624:CDS | 40.0% | |
| CGTTCTCTAATGCAATCTCT+TGG | + | chr2.1:48380105-48380124 | MS.gene85624:CDS | 40.0% | |
| CTCCTTAGCTGTTATCAGTA+TGG | - | chr2.1:48382561-48382580 | None:intergenic | 40.0% | |
| GAAGATGAAGATGAAGAAGG+TGG | - | chr2.1:48381485-48381504 | None:intergenic | 40.0% | |
| GAATAGTCGTTTGTCCTTCT+TGG | + | chr2.1:48380296-48380315 | MS.gene85624:intron | 40.0% | |
| GACGGTGACTCAAAACATAT+AGG | + | chr2.1:48383419-48383438 | MS.gene85624:intron | 40.0% | |
| GATCGCTTAAGTAAGATCTC+AGG | + | chr2.1:48382289-48382308 | MS.gene85624:intron | 40.0% | |
| GATGCTCTCACATTTGTCTT+TGG | + | chr2.1:48380127-48380146 | MS.gene85624:CDS | 40.0% | |
| GGAGACATTGAGATCTTTGA+TGG | + | chr2.1:48382577-48382596 | MS.gene85624:CDS | 40.0% | |
| GGCTGCATAAACTTTATCAC+AGG | + | chr2.1:48383793-48383812 | MS.gene85624:intron | 40.0% | |
| GTAGGATCAGGTGAAAATTG+AGG | - | chr2.1:48381593-48381612 | None:intergenic | 40.0% | |
| TAAAAGCTAGTCCAGGAACA+CGG | - | chr2.1:48380751-48380770 | None:intergenic | 40.0% | |
| TCCCGTAAGTACAGTTCAAA+TGG | + | chr2.1:48381209-48381228 | MS.gene85624:intron | 40.0% | |
| TGATTCCTAAAAGCTAGTCC+AGG | - | chr2.1:48380758-48380777 | None:intergenic | 40.0% | |
| TTTACAGGAAGCAAGGATCA+AGG | + | chr2.1:48380957-48380976 | MS.gene85624:intron | 40.0% | |
| ! | CGACATAATAATGGGGTTCT+AGG | - | chr2.1:48383821-48383840 | None:intergenic | 40.0% |
| ! | CTTAGAGCATTACTTCCTCA+AGG | + | chr2.1:48382046-48382065 | MS.gene85624:CDS | 40.0% |
| ! | GATGAAGTTGATTACTCGAG+GGG | - | chr2.1:48381973-48381992 | None:intergenic | 40.0% |
| ! | GGGGTGTAGATAGAACATTT+TGG | - | chr2.1:48381760-48381779 | None:intergenic | 40.0% |
| ! | GGTAGTAGTGTGTTTGAAAC+AGG | - | chr2.1:48381650-48381669 | None:intergenic | 40.0% |
| ! | GTGTTTGAAACAGGTCTCAT+TGG | - | chr2.1:48381641-48381660 | None:intergenic | 40.0% |
| ! | TGTGCCACATAATTTTGCTG+AGG | - | chr2.1:48381800-48381819 | None:intergenic | 40.0% |
| ! | TTTATTCCTCCAAGTTGGGT+AGG | - | chr2.1:48381611-48381630 | None:intergenic | 40.0% |
| ! | TTTGAAACAGGTCTCATTGG+TGG | - | chr2.1:48381638-48381657 | None:intergenic | 40.0% |
| !! | AGGTTGATGTTGATGAGAAG+GGG | - | chr2.1:48381780-48381799 | None:intergenic | 40.0% |
| !! | GAGGTTGATGTTGATGAGAA+GGG | - | chr2.1:48381781-48381800 | None:intergenic | 40.0% |
| !! | TGAGGTTGATGTTGATGAGA+AGG | - | chr2.1:48381782-48381801 | None:intergenic | 40.0% |
| AATTGAGGTGGAGAAGTTCC+AGG | - | chr2.1:48381578-48381597 | None:intergenic | 45.0% | |
| AGATTCGCTCTTCAACCTTG+TGG | + | chr2.1:48380543-48380562 | MS.gene85624:intron | 45.0% | |
| AGTCGTTTGTCCTTCTTGGA+TGG | + | chr2.1:48380300-48380319 | MS.gene85624:intron | 45.0% | |
| CAGAAGCTAGTGCATTTGGA+AGG | + | chr2.1:48381822-48381841 | MS.gene85624:CDS | 45.0% | |
| CATCCAGAAGCTAGTGCATT+TGG | + | chr2.1:48381818-48381837 | MS.gene85624:CDS | 45.0% | |
| CTCTTCAACCTTGTGGTTCT+CGG | + | chr2.1:48380550-48380569 | MS.gene85624:intron | 45.0% | |
| CTGAGTAATCCTTAGCCTGA+AGG | - | chr2.1:48382936-48382955 | None:intergenic | 45.0% | |
| CTTCAGGCTAAGGATTACTC+AGG | + | chr2.1:48382934-48382953 | MS.gene85624:CDS | 45.0% | |
| GACTTGCAAGTGAACGTGAT+GGG | + | chr2.1:48382779-48382798 | MS.gene85624:CDS | 45.0% | |
| GGATCAGGTGAAAATTGAGG+TGG | - | chr2.1:48381590-48381609 | None:intergenic | 45.0% | |
| GTACGTACCTTAGTTCCTTG+AGG | - | chr2.1:48382064-48382083 | None:intergenic | 45.0% | |
| TGACTTGATACAGTCCCAAG+TGG | + | chr2.1:48385398-48385417 | MS.gene85624:CDS | 45.0% | |
| ! | AATTCAGTTCTGACGGCTAC+AGG | - | chr2.1:48380081-48380100 | None:intergenic | 45.0% |
| ! | CTTCCAAATGCACTAGCTTC+TGG | - | chr2.1:48381824-48381843 | None:intergenic | 45.0% |
| ! | GATCTGAGTCTAGTTCCACT+CGG | - | chr2.1:48382273-48382292 | None:intergenic | 45.0% |
| ! | GGTTGATGTTGATGAGAAGG+GGG | - | chr2.1:48381779-48381798 | None:intergenic | 45.0% |
| ! | GTTTTCATGGGGTGCAACAA+AGG | + | chr2.1:48381067-48381086 | MS.gene85624:CDS | 45.0% |
| !!! | GTGTTCCTGGACTAGCTTTT+AGG | + | chr2.1:48380750-48380769 | MS.gene85624:CDS | 45.0% |
| !!! | GTTTTGTTTAGCCGTGTTCC+TGG | + | chr2.1:48380737-48380756 | MS.gene85624:intron | 45.0% |
| !!! | AAAATTTAATTTATATATGA+AGG | - | chr2.1:48383185-48383204 | None:intergenic | 5.0% |
| !!! | AAATTAAATTTTAATATTCA+TGG | + | chr2.1:48383193-48383212 | MS.gene85624:intron | 5.0% |
| !!! | AATTTATATTGATTTTTTTA+AGG | + | chr2.1:48384490-48384509 | MS.gene85624:intron | 5.0% |
| !!! | ATTTATATTGATTTTTTTAA+GGG | + | chr2.1:48384491-48384510 | MS.gene85624:intron | 5.0% |
| CACCGTCTCAAGTGTGAGAA+AGG | - | chr2.1:48383406-48383425 | None:intergenic | 50.0% | |
| GCAGATAAGTGAATGGGACG+AGG | + | chr2.1:48385341-48385360 | MS.gene85624:intron | 50.0% | |
| GGACTTGCAAGTGAACGTGA+TGG | + | chr2.1:48382778-48382797 | MS.gene85624:CDS | 50.0% | |
| TCACCTGATCCTACCCAACT+TGG | + | chr2.1:48381599-48381618 | MS.gene85624:CDS | 50.0% | |
| TCTTCTCACTGCTTCCTGGA+AGG | - | chr2.1:48385370-48385389 | None:intergenic | 50.0% | |
| TGCGCAGGCGGATATTCAAA+CGG | + | chr2.1:48381400-48381419 | MS.gene85624:intron | 50.0% | |
| ! | AGTTCTGACGGCTACAGGAA+GGG | - | chr2.1:48380076-48380095 | None:intergenic | 50.0% |
| CCACTCTTCTCACTGCTTCC+TGG | - | chr2.1:48385374-48385393 | None:intergenic | 55.0% | |
| CCAGGAAGCAGTGAGAAGAG+TGG | + | chr2.1:48385371-48385390 | MS.gene85624:CDS | 55.0% | |
| CCTGATCCTACCCAACTTGG+AGG | + | chr2.1:48381602-48381621 | MS.gene85624:CDS | 55.0% | |
| CCTGCGCAGCCGAAAAAATG+TGG | - | chr2.1:48381388-48381407 | None:intergenic | 55.0% | |
| GTCTCGAACCGAGAACCACA+AGG | - | chr2.1:48380561-48380580 | None:intergenic | 55.0% | |
| TGAGGTGGAGAAGTTCCAGG+TGG | - | chr2.1:48381575-48381594 | None:intergenic | 55.0% | |
| ! | CAGTTCTGACGGCTACAGGA+AGG | - | chr2.1:48380077-48380096 | None:intergenic | 55.0% |
| ! | CCTCCAAGTTGGGTAGGATC+AGG | - | chr2.1:48381605-48381624 | None:intergenic | 55.0% |
| !!! | CATTTTTTCGGCTGCGCAGG+CGG | + | chr2.1:48381388-48381407 | MS.gene85624:intron | 55.0% |
| !!! | CCACATTTTTTCGGCTGCGC+AGG | + | chr2.1:48381385-48381404 | MS.gene85624:intron | 55.0% |
| ATGGGACGAGGAAGCCTTCC+AGG | + | chr2.1:48385353-48385372 | MS.gene85624:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 48380057 | 48385434 | 48380057 | ID=MS.gene85624 |
| chr2.1 | mRNA | 48380057 | 48385434 | 48380057 | ID=MS.gene85624.t1;Parent=MS.gene85624 |
| chr2.1 | exon | 48380057 | 48380172 | 48380057 | ID=MS.gene85624.t1.exon1;Parent=MS.gene85624.t1 |
| chr2.1 | CDS | 48380057 | 48380172 | 48380057 | ID=cds.MS.gene85624.t1;Parent=MS.gene85624.t1 |
| chr2.1 | exon | 48380302 | 48380427 | 48380302 | ID=MS.gene85624.t1.exon2;Parent=MS.gene85624.t1 |
| chr2.1 | CDS | 48380302 | 48380427 | 48380302 | ID=cds.MS.gene85624.t1;Parent=MS.gene85624.t1 |
| chr2.1 | exon | 48380748 | 48380853 | 48380748 | ID=MS.gene85624.t1.exon3;Parent=MS.gene85624.t1 |
| chr2.1 | CDS | 48380748 | 48380853 | 48380748 | ID=cds.MS.gene85624.t1;Parent=MS.gene85624.t1 |
| chr2.1 | exon | 48380964 | 48380978 | 48380964 | ID=MS.gene85624.t1.exon4;Parent=MS.gene85624.t1 |
| chr2.1 | CDS | 48380964 | 48380978 | 48380964 | ID=cds.MS.gene85624.t1;Parent=MS.gene85624.t1 |
| chr2.1 | exon | 48381061 | 48381123 | 48381061 | ID=MS.gene85624.t1.exon5;Parent=MS.gene85624.t1 |
| chr2.1 | CDS | 48381061 | 48381123 | 48381061 | ID=cds.MS.gene85624.t1;Parent=MS.gene85624.t1 |
| chr2.1 | exon | 48381407 | 48382075 | 48381407 | ID=MS.gene85624.t1.exon6;Parent=MS.gene85624.t1 |
| chr2.1 | CDS | 48381407 | 48382075 | 48381407 | ID=cds.MS.gene85624.t1;Parent=MS.gene85624.t1 |
| chr2.1 | exon | 48382545 | 48382955 | 48382545 | ID=MS.gene85624.t1.exon7;Parent=MS.gene85624.t1 |
| chr2.1 | CDS | 48382545 | 48382955 | 48382545 | ID=cds.MS.gene85624.t1;Parent=MS.gene85624.t1 |
| chr2.1 | exon | 48385345 | 48385434 | 48385345 | ID=MS.gene85624.t1.exon8;Parent=MS.gene85624.t1 |
| chr2.1 | CDS | 48385345 | 48385434 | 48385345 | ID=cds.MS.gene85624.t1;Parent=MS.gene85624.t1 |
| Gene Sequence |
| Protein sequence |
