AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene85863

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85863.t1 MTR_6g051425 29.964 277 177 6 50 313 19 291 3.33e-35 137
MS.gene85863.t1 MTR_0856s0010 43.023 172 84 4 3 173 2 160 2.76e-33 125
MS.gene85863.t1 MTR_4g035820 30.405 296 180 12 9 288 39 324 6.46e-24 107
MS.gene85863.t1 MTR_0558s0020 25.260 289 182 8 30 284 8 296 9.27e-22 97.1
MS.gene85863.t1 MTR_1g070355 28.936 235 152 7 54 278 80 309 8.19e-21 97.4
MS.gene85863.t1 MTR_7g446060 51.220 82 40 0 130 211 7 88 6.10e-20 87.0
MS.gene85863.t1 MTR_3g450850 26.829 287 191 8 2 272 3 286 8.94e-18 86.3
MS.gene85863.t1 MTR_8g446020 24.576 236 157 4 52 284 39 256 1.59e-17 83.6
MS.gene85863.t1 MTR_7g446480 31.977 172 116 1 122 292 143 314 4.04e-17 83.6
MS.gene85863.t1 MTR_6g022070 28.966 145 99 1 338 482 1 141 4.43e-17 84.0
MS.gene85863.t1 MTR_1g008290 32.331 133 88 1 108 240 14 144 9.03e-17 78.2
MS.gene85863.t1 MTR_7g446510 31.395 172 117 1 122 292 158 329 1.58e-16 82.0
MS.gene85863.t1 MTR_7g446520 25.847 236 162 2 52 286 92 315 3.58e-16 80.9
MS.gene85863.t1 MTR_7g115320 61.111 54 18 1 137 190 9 59 9.34e-15 70.5
MS.gene85863.t1 MTR_1g083640 22.794 272 176 8 18 255 11 282 2.60e-14 74.7
MS.gene85863.t1 MTR_1g019850 30.303 165 98 6 17 175 43 196 3.76e-14 73.2
MS.gene85863.t1 MTR_3g012160 41.975 81 46 1 193 273 14 93 1.40e-13 67.4
MS.gene85863.t1 MTR_5g023310 28.662 157 43 3 179 334 16 104 3.07e-13 67.0
MS.gene85863.t1 MTR_5g076070 23.552 259 185 7 23 272 28 282 4.31e-13 70.9
MS.gene85863.t1 MTR_6g090505 25.843 178 129 2 109 283 53 230 1.70e-12 70.1
MS.gene85863.t1 MTR_0402s0040 25.000 180 130 3 47 221 25 204 5.53e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85863.t1 AT4G15090 34.926 607 374 10 48 644 51 646 7.87e-121 382
MS.gene85863.t1 AT4G15090 34.926 607 374 10 48 644 51 646 7.87e-121 382
MS.gene85863.t1 AT4G15090 34.926 607 374 10 48 644 51 646 7.87e-121 382
MS.gene85863.t1 AT4G15090 34.926 607 374 10 48 644 51 646 7.87e-121 382
MS.gene85863.t1 AT4G15090 34.926 607 374 10 48 644 51 646 7.87e-121 382
MS.gene85863.t1 AT4G38180 34.375 640 388 12 8 631 38 661 3.02e-119 377
MS.gene85863.t1 AT3G22170 32.258 651 382 11 18 643 35 651 1.60e-111 358
MS.gene85863.t1 AT3G22170 32.258 651 382 11 18 643 35 651 1.60e-111 358
MS.gene85863.t1 AT1G52520 32.368 587 372 12 33 607 66 639 1.68e-104 336
MS.gene85863.t1 AT1G76320 31.857 587 376 9 52 633 1 568 6.92e-104 333
MS.gene85863.t1 AT1G76320 31.857 587 376 9 52 633 1 568 1.54e-103 334
MS.gene85863.t1 AT1G76320 31.857 587 376 9 52 633 1 568 1.90e-103 334
MS.gene85863.t1 AT1G76320 31.857 587 376 9 52 633 1 568 1.90e-103 334
MS.gene85863.t1 AT2G27110 31.967 610 362 14 48 645 49 617 7.17e-94 311
MS.gene85863.t1 AT2G27110 31.967 610 362 14 48 645 49 617 7.17e-94 311
MS.gene85863.t1 AT3G06250 33.393 563 323 14 48 606 190 704 2.85e-92 305
MS.gene85863.t1 AT3G06250 33.393 563 323 14 48 606 190 704 2.85e-92 305
MS.gene85863.t1 AT3G06250 33.393 563 323 14 48 606 190 704 2.85e-92 305
MS.gene85863.t1 AT1G80010 32.437 595 368 12 39 610 82 665 1.69e-90 300
MS.gene85863.t1 AT2G27110 34.937 478 288 9 172 645 14 472 8.92e-89 294
MS.gene85863.t1 AT5G18960 32.060 602 354 16 28 622 192 745 9.00e-86 288
MS.gene85863.t1 AT5G18960 32.060 602 354 16 28 622 192 745 9.00e-86 288
MS.gene85863.t1 AT2G32250 34.086 443 271 6 224 658 135 564 5.12e-82 278
MS.gene85863.t1 AT2G32250 34.086 443 271 6 224 658 176 605 5.34e-82 278
MS.gene85863.t1 AT2G32250 34.086 443 271 6 224 658 135 564 5.48e-82 278
MS.gene85863.t1 AT2G32250 34.086 443 271 6 224 658 176 605 1.25e-81 277
MS.gene85863.t1 AT2G32250 34.086 443 271 6 224 658 176 605 1.25e-81 277
MS.gene85863.t1 AT2G32250 34.086 443 271 6 224 658 176 605 1.54e-81 277
MS.gene85863.t1 AT2G32250 34.086 443 271 6 224 658 176 605 1.54e-81 277
MS.gene85863.t1 AT2G32250 34.086 443 271 6 224 658 176 605 1.54e-81 277
MS.gene85863.t1 AT4G19990 30.033 606 354 12 51 632 24 583 3.56e-79 270
MS.gene85863.t1 AT4G19990 30.033 606 354 12 51 632 24 583 3.56e-79 270
MS.gene85863.t1 AT4G19990 30.033 606 354 12 51 632 24 583 5.09e-79 269
MS.gene85863.t1 AT4G19990 30.033 606 354 12 51 632 38 597 7.03e-79 269
MS.gene85863.t1 AT4G19990 30.033 606 354 12 51 632 24 583 7.74e-79 269
MS.gene85863.t1 AT4G19990 30.033 606 354 12 51 632 24 583 7.74e-79 269
MS.gene85863.t1 AT4G38170 34.021 388 245 4 221 606 21 399 4.30e-76 256
MS.gene85863.t1 AT4G19990 30.798 539 319 10 104 632 32 526 8.23e-75 256
MS.gene85863.t1 AT1G10240 26.198 626 417 16 1 603 1 604 6.52e-64 226
MS.gene85863.t1 AT1G10240 26.198 626 417 16 1 603 1 604 6.52e-64 226
MS.gene85863.t1 AT5G28530 27.946 594 364 13 46 603 53 618 1.95e-61 219
MS.gene85863.t1 AT5G28530 27.692 585 373 11 46 603 53 614 3.02e-61 219
MS.gene85863.t1 AT5G28530 27.692 585 373 11 46 603 53 614 3.02e-61 219
MS.gene85863.t1 AT5G28530 27.077 325 205 7 290 603 252 555 3.29e-27 117
MS.gene85863.t1 AT5G28530 28.324 173 107 5 46 205 53 221 8.05e-11 65.9
MS.gene85863.t1 AT5G28530 26.332 319 211 5 290 603 252 551 5.44e-27 117
MS.gene85863.t1 AT5G28530 28.324 173 107 5 46 205 53 221 7.42e-11 66.2

Find 149 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTGTTGACGTTTCGGATTC+CGG 0.201943 6.4:-15637899 MS.gene85863:CDS
TCTTTCCCGCTCTTCGAAAA+TGG 0.249066 6.4:+15636737 None:intergenic
GATCGCAAACCCTTGTTTCA+TGG 0.299904 6.4:+15637772 None:intergenic
AAGACCGCAACCTAGTAAAA+TGG 0.321194 6.4:+15637091 None:intergenic
GTGTTGACGTTTCGGATTCC+GGG 0.344560 6.4:-15637898 MS.gene85863:CDS
GGCTATGCAGAATGCAATTC+AGG 0.347065 6.4:-15636967 MS.gene85863:CDS
TTGCTTTAAAGAAGGGTCTA+TGG 0.361166 6.4:-15637601 MS.gene85863:CDS
ATGCCATTTGCCCCGTTTGT+TGG 0.369173 6.4:-15637134 MS.gene85863:CDS
GTACACCAATGACAAGTATA+TGG 0.374366 6.4:-15636469 MS.gene85863:CDS
ACTAAATCACGGTTGTTTGC+TGG 0.375082 6.4:-15637533 MS.gene85863:CDS
AGTATTGTGTTGATTTCAAC+GGG 0.389824 6.4:-15636323 MS.gene85863:CDS
TCTCCGTCACGGGGTAATAA+AGG 0.390483 6.4:+15637941 None:intergenic
TGCTGCTCGTGTTGACGTTT+CGG 0.391419 6.4:-15637906 MS.gene85863:CDS
CACCACCTATGCCTAGTATT+AGG 0.393202 6.4:+15636936 None:intergenic
GGATTAAGAATTGGTTGATC+AGG 0.405554 6.4:+15635901 None:intergenic
CTAGGCATAGGTGGTGTCTA+TGG 0.405638 6.4:-15636929 MS.gene85863:CDS
GCCTCATTGTGGTGTGGGAG+GGG 0.414469 6.4:-15635965 MS.gene85863:CDS
AAAGGATGATCGATCAATAT+AGG 0.415391 6.4:+15637959 None:intergenic
CCTCTGTGTTGTTGACATTC+CGG 0.424793 6.4:+15636680 None:intergenic
GATGATTGACACCAACAAAC+GGG 0.432575 6.4:+15637123 None:intergenic
ATCAGCTAGCTCTCCGTCAC+GGG 0.432730 6.4:+15637931 None:intergenic
TATCTCCATATACTTGTCAT+TGG 0.432915 6.4:+15636464 None:intergenic
TTGGTGGTATGTTTGATTCA+TGG 0.433399 6.4:+15637675 None:intergenic
ACACCAACAAACGGGGCAAA+TGG 0.438957 6.4:+15637131 None:intergenic
GCAAACAACCGTGATTTAGT+TGG 0.439208 6.4:+15637536 None:intergenic
ATGGTTTGGGTGAAAATGAT+TGG 0.445440 6.4:-15636767 MS.gene85863:CDS
TGATGATTGACACCAACAAA+CGG 0.449717 6.4:+15637122 None:intergenic
CAAATGGTCTAGCAATAAGT+TGG 0.450450 6.4:-15636004 MS.gene85863:CDS
ACTTCCACGACCGAAACAAT+TGG 0.456179 6.4:+15635781 None:intergenic
ACACAATACTTAGTTTCGTT+CGG 0.457073 6.4:+15636336 None:intergenic
GGCTAAGGTGTATGTCTTCG+AGG 0.457503 6.4:-15637022 MS.gene85863:CDS
TATCCTACTTTGCTAGAATG+AGG 0.459924 6.4:-15637310 MS.gene85863:CDS
AAAACTAGAAACTCTAAGAA+AGG 0.460549 6.4:-15637749 MS.gene85863:CDS
ACTCCAAGACAAGGCTGAAA+AGG 0.462412 6.4:-15636574 MS.gene85863:CDS
GTCATACTTGTTTGTCAAGT+AGG 0.465266 6.4:+15637157 None:intergenic
AGGTTGTGTTTCCTAATACT+AGG 0.465284 6.4:-15636947 MS.gene85863:CDS
AGCCTCATTGTGGTGTGGGA+GGG 0.467819 6.4:-15635966 MS.gene85863:CDS
AAAACCAATTGTTTCGGTCG+TGG 0.470818 6.4:-15635785 MS.gene85863:CDS
GCAAAAGAAAGACACCTTCT+CGG 0.472868 6.4:-15637359 MS.gene85863:CDS
GATAACGGTTGCTTTAAAGA+AGG 0.473052 6.4:-15637609 MS.gene85863:CDS
AACATCACCAAAGTATTCAT+AGG 0.473828 6.4:+15637196 None:intergenic
TTTGTTGGTGTCAATCATCA+TGG 0.475674 6.4:-15637119 MS.gene85863:CDS
TGTATGAAGAAATGCTCAAA+TGG 0.477672 6.4:-15636020 MS.gene85863:CDS
CCACACATAGAAAGATTTGA+AGG 0.478166 6.4:-15636108 MS.gene85863:CDS
ATACTTGTCATTGGTGTACT+CGG 0.478221 6.4:+15636473 None:intergenic
GAGCAATCAAGTTTCTTCGT+TGG 0.480101 6.4:+15637638 None:intergenic
CACTTATGCTCGATGGCTGA+TGG 0.482201 6.4:-15637986 None:intergenic
TCGGGAAGGAAGGAGATGGC+AGG 0.482875 6.4:-15637340 MS.gene85863:CDS
CAGCCTCATTGTGGTGTGGG+AGG 0.483166 6.4:-15635967 MS.gene85863:CDS
ATTTGTTGTTTCAAAGGTCC+CGG 0.485747 6.4:+15637880 None:intergenic
TTGAAATTGTCTCTCGATTG+TGG 0.489013 6.4:+15636497 None:intergenic
GACAGCATTTGTTGTTTCAA+AGG 0.491833 6.4:+15637874 None:intergenic
CTTGTTTCATGGCATATTCA+CGG 0.492232 6.4:+15637783 None:intergenic
TCCGTTAAAAGTACCACGTA+AGG 0.492742 6.4:-15635881 MS.gene85863:CDS
GACAATACTCTCCTCTAAAA+CGG 0.498094 6.4:+15636368 None:intergenic
CGTGAATATGCCATGAAACA+AGG 0.498225 6.4:-15637782 MS.gene85863:CDS
TTACAGCCTCATTGTGGTGT+GGG 0.501414 6.4:-15635970 MS.gene85863:CDS
TTAAAAGACATACCGATAGT+AGG 0.501742 6.4:+15637833 None:intergenic
TTTCGAAGAGCGGGAAAGAT+GGG 0.502201 6.4:-15636733 MS.gene85863:CDS
GTTGGATTCGTCTTCAAAGT+TGG 0.502236 6.4:+15637656 None:intergenic
CATCTCCTTCCTTCCCGAGA+AGG 0.502837 6.4:+15637345 None:intergenic
TTACCTGGTTGTTCGAAACA+TGG 0.503284 6.4:-15637043 MS.gene85863:CDS
TGGTCATCTTAGAGTGAAAG+AGG 0.503540 6.4:-15636223 MS.gene85863:CDS
TATGTCTTCGAGGCCTCCAA+TGG 0.508338 6.4:-15637012 MS.gene85863:CDS
TCGGTTACAATTCCCATTGG+AGG 0.511504 6.4:+15636999 None:intergenic
TTACGAAAATCTAACATTTG+TGG 0.512305 6.4:-15637405 MS.gene85863:CDS
AAACGATCAGGCAGGTGTAC+GGG 0.512319 6.4:-15637468 MS.gene85863:CDS
CGTTCCATGGTATGTGATGC+CGG 0.512631 6.4:-15637431 MS.gene85863:CDS
TTTACAGCCTCATTGTGGTG+TGG 0.514017 6.4:-15635971 MS.gene85863:CDS
GAGAGATGTCAGAAACTTTG+TGG 0.514693 6.4:-15637381 MS.gene85863:CDS
TCTGGGCTGATGCACGTAGT+AGG 0.516810 6.4:-15637223 MS.gene85863:CDS
CAAAAGAAAGACACCTTCTC+GGG 0.517286 6.4:-15637358 MS.gene85863:CDS
CCTTCAAATCTTTCTATGTG+TGG 0.521556 6.4:+15636108 None:intergenic
ATAACGGTTGCTTTAAAGAA+GGG 0.522275 6.4:-15637608 MS.gene85863:CDS
AAACTAGAAACTCTAAGAAA+GGG 0.523644 6.4:-15637748 MS.gene85863:CDS
TTCCCTCATTCTAGCAAAGT+AGG 0.524536 6.4:+15637307 None:intergenic
GAACAAAAGTTTCCGTTCCA+TGG 0.529264 6.4:-15637444 MS.gene85863:CDS
GGATTCGTCTTCAAAGTTGG+TGG 0.530111 6.4:+15637659 None:intergenic
AAATGGTCTAGCAATAAGTT+GGG 0.530354 6.4:-15636003 MS.gene85863:CDS
TAAACGATCAGGCAGGTGTA+CGG 0.533293 6.4:-15637469 MS.gene85863:CDS
CATCAGCTAGCTCTCCGTCA+CGG 0.533746 6.4:+15637930 None:intergenic
AAGTATTGTGTTGATTTCAA+CGG 0.536214 6.4:-15636324 MS.gene85863:CDS
ATCCTACTTTGCTAGAATGA+GGG 0.537508 6.4:-15637309 MS.gene85863:CDS
TGATCGGTTACAATTCCCAT+TGG 0.541217 6.4:+15636996 None:intergenic
CTGCATAGCCTTGCACTGAT+CGG 0.542185 6.4:+15636980 None:intergenic
CTATGAGATTGACATGGACG+AGG 0.547341 6.4:-15637267 MS.gene85863:CDS
TGATTGCTCAGCTAAGATAA+CGG 0.550952 6.4:-15637624 MS.gene85863:CDS
GATAAATTCACGCCTACTAT+CGG 0.551302 6.4:-15637845 MS.gene85863:CDS
TGTTTGCTGTTTGAGTTCAG+AGG 0.551367 6.4:-15636276 MS.gene85863:CDS
ATTCTAACTTGTGCAAGAGA+AGG 0.552020 6.4:-15637701 MS.gene85863:CDS
AGGTCTGCCTATGAATACTT+TGG 0.552277 6.4:-15637203 MS.gene85863:CDS
AGACACCTTCTCGGGAAGGA+AGG 0.553011 6.4:-15637350 MS.gene85863:CDS
AGTGGTGGACAACCGACGAT+TGG 0.554885 6.4:+15635846 None:intergenic
TGTTTCGAACAACCAGGTAA+AGG 0.558836 6.4:+15637046 None:intergenic
CTAAATTTATCTTGCCACGA+TGG 0.563368 6.4:-15636194 MS.gene85863:CDS
GAGATACAAGTAGAATTTCG+TGG 0.566723 6.4:-15636447 MS.gene85863:CDS
GAACAACCAGGTAAAGGACT+TGG 0.570795 6.4:+15637052 None:intergenic
ATGTCTTCGAGGCCTCCAAT+GGG 0.571048 6.4:-15637011 MS.gene85863:CDS
TGTTTCCTAATACTAGGCAT+AGG 0.571109 6.4:-15636941 MS.gene85863:CDS
TTGTTGGTGTCAATCATCAT+GGG 0.576932 6.4:-15637118 MS.gene85863:CDS
TCTCGAAGGTGTGACTACAT+TGG 0.577648 6.4:-15636409 MS.gene85863:CDS
GACAACCGACGATTGGTTCG+AGG 0.589132 6.4:+15635853 None:intergenic
TTGTGTGTATGATTCTCTGC+GGG 0.590009 6.4:-15636832 MS.gene85863:CDS
CATTTCTTCATACAAATCAG+AGG 0.596809 6.4:+15636029 None:intergenic
AACTCTAAGAAAGGGTCCGA+TGG 0.598447 6.4:-15637740 MS.gene85863:CDS
GTGAATATGCCATGAAACAA+GGG 0.602322 6.4:-15637781 MS.gene85863:CDS
CGACAACGCACTCCAAGACA+AGG 0.606607 6.4:-15636583 MS.gene85863:CDS
TGCATCAATGAGCAAAGATG+TGG 0.607177 6.4:-15635554 MS.gene85863:CDS
AGATACAAGTAGAATTTCGT+GGG 0.607840 6.4:-15636446 MS.gene85863:CDS
AGAAAGACACCTTCTCGGGA+AGG 0.609091 6.4:-15637354 MS.gene85863:CDS
GTTCGAGGACGTCCCTTACG+TGG 0.612430 6.4:+15635868 None:intergenic
ACCACCGGCATCACATACCA+TGG 0.613048 6.4:+15637427 None:intergenic
AAGATACCAAGTCCTTTACC+TGG 0.614091 6.4:-15637058 MS.gene85863:CDS
AAATGCAACTGTTATCTCGA+AGG 0.615193 6.4:-15636423 MS.gene85863:CDS
TTCCTAATACTAGGCATAGG+TGG 0.615209 6.4:-15636938 MS.gene85863:CDS
CAAGCACAATCATTCCATGC+GGG 0.616971 6.4:-15636527 MS.gene85863:CDS
ATACTTGTTTGTCAAGTAGG+TGG 0.617215 6.4:+15637160 None:intergenic
GGTTGTTCGAAACATGGCTA+AGG 0.617470 6.4:-15637037 MS.gene85863:CDS
CGTGGCAAGATAAATTTAGA+CGG 0.619992 6.4:+15636198 None:intergenic
AATTGTAACCGATCAGTGCA+AGG 0.620761 6.4:-15636988 MS.gene85863:CDS
CGGGAAGGAAGGAGATGGCA+GGG 0.622349 6.4:-15637339 MS.gene85863:CDS
TCATCCCAACAGTCAACTAG+TGG 0.623204 6.4:-15635592 MS.gene85863:intron
CCGTTAAAAGTACCACGTAA+GGG 0.624486 6.4:-15635880 MS.gene85863:CDS
CGGCATCACATACCATGGAA+CGG 0.625469 6.4:+15637432 None:intergenic
TAGCCATGTTTCGAACAACC+AGG 0.627145 6.4:+15637040 None:intergenic
ATTGTGGAATTTGACCCGCA+TGG 0.627292 6.4:+15636513 None:intergenic
CGTGACGGAGAGCTAGCTGA+TGG 0.630516 6.4:-15637929 MS.gene85863:CDS
CTTCTCGGGAAGGAAGGAGA+TGG 0.631777 6.4:-15637344 MS.gene85863:CDS
ATTAGTTTACAGCCTCATTG+TGG 0.632381 6.4:-15635976 MS.gene85863:CDS
AAAGGATACGCACAATACAA+AGG 0.637659 6.4:-15636876 MS.gene85863:CDS
CAAGGCTGAAAAGGAATACG+AGG 0.638254 6.4:-15636565 MS.gene85863:CDS
GGATGATCGATCAATATAGG+AGG 0.639611 6.4:+15637962 None:intergenic
TACAAATCAGAGGTTTGACT+AGG 0.642589 6.4:+15636039 None:intergenic
AGATAAGTCCAACTAAATCA+CGG 0.645312 6.4:-15637544 MS.gene85863:CDS
TCCCCTCCCACACCACAATG+AGG 0.658382 6.4:+15635964 None:intergenic
GACGTCCTCGAACCAATCGT+CGG 0.662498 6.4:-15635858 MS.gene85863:CDS
TTATGAAATTGCAGAATGTG+CGG 0.662542 6.4:-15636070 MS.gene85863:CDS
ATGATTGACACCAACAAACG+GGG 0.665562 6.4:+15637124 None:intergenic
TTAGAGGAGAGTATTGTCTG+TGG 0.669312 6.4:-15636363 MS.gene85863:CDS
GGATCATAGCTTAAACACGA+TGG 0.674970 6.4:-15635944 MS.gene85863:CDS
CATCCTTTATTACCCCGTGA+CGG 0.681060 6.4:-15637944 MS.gene85863:CDS
TCATAGCTTAAACACGATGG+AGG 0.690849 6.4:-15635941 MS.gene85863:CDS
TCAGCTAGCTCTCCGTCACG+GGG 0.691017 6.4:+15637932 None:intergenic
TCAAGCACAATCATTCCATG+CGG 0.697666 6.4:-15636528 MS.gene85863:CDS
ATTGTGTGTATGATTCTCTG+CGG 0.733784 6.4:-15636833 MS.gene85863:CDS
TCCATGGTATGTGATGCCGG+TGG 0.764195 6.4:-15637428 MS.gene85863:CDS
CCGGAATGTCAACAACACAG+AGG 0.797075 6.4:-15636680 MS.gene85863:CDS
AGATTGATATGCATGCACAG+CGG 0.798983 6.4:-15637502 MS.gene85863:CDS
GTATTGTGTTGATTTCAACG+GGG 0.841514 6.4:-15636322 MS.gene85863:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAAAAAATGATTTCT+GGG - chr6.4:15636808-15636827 MS.gene85863:CDS 10.0%
!!! AAATCATTTTTTAAATAACA+TGG + chr6.4:15636806-15636825 None:intergenic 10.0%
!! GTTATTTAAAAAATGATTTC+TGG - chr6.4:15636807-15636826 MS.gene85863:CDS 15.0%
!! AAGAAAAAAACCAATTGTTT+CGG - chr6.4:15637720-15637739 MS.gene85863:CDS 20.0%
!! AATGTAATCGCAATAATAAT+AGG + chr6.4:15637769-15637788 None:intergenic 20.0%
!! ACAACATTCATTGAAAAATA+TGG - chr6.4:15636725-15636744 MS.gene85863:CDS 20.0%
!! ATTCATTGAAAAATATGGTT+TGG - chr6.4:15636730-15636749 MS.gene85863:CDS 20.0%
!! TTCATTGAAAAATATGGTTT+GGG - chr6.4:15636731-15636750 MS.gene85863:CDS 20.0%
! AAAATTGCCGAAAAATTGAA+AGG - chr6.4:15636617-15636636 MS.gene85863:CDS 25.0%
! TTACGAAAATCTAACATTTG+TGG - chr6.4:15636106-15636125 MS.gene85863:CDS 25.0%
!! AAAACTAGAAACTCTAAGAA+AGG - chr6.4:15635762-15635781 MS.gene85863:intron 25.0%
!! AAACTAGAAACTCTAAGAAA+GGG - chr6.4:15635763-15635782 MS.gene85863:intron 25.0%
!! TATCGGTATGTCTTTTAAAT+CGG - chr6.4:15635683-15635702 MS.gene85863:intron 25.0%
!!! AAGTATTGTGTTGATTTCAA+CGG - chr6.4:15637187-15637206 MS.gene85863:CDS 25.0%
!!! ACTTTTAACGGATTAAGAAT+TGG + chr6.4:15637622-15637641 None:intergenic 25.0%
!!! GAAATATTTTAACATGCCAT+CGG + chr6.4:15635790-15635809 None:intergenic 25.0%
!!! TTTTTTCACAATCTTTTCAG+TGG + chr6.4:15637686-15637705 None:intergenic 25.0%
AAAGGATGATCGATCAATAT+AGG + chr6.4:15635555-15635574 None:intergenic 30.0%
AAATGGTCTAGCAATAAGTT+GGG - chr6.4:15637508-15637527 MS.gene85863:CDS 30.0%
ACACAATACTTAGTTTCGTT+CGG + chr6.4:15637178-15637197 None:intergenic 30.0%
AGATAAGTCCAACTAAATCA+CGG - chr6.4:15635967-15635986 MS.gene85863:CDS 30.0%
AGATACAAGTAGAATTTCGT+GGG - chr6.4:15637065-15637084 MS.gene85863:CDS 30.0%
CATTTCTTCATACAAATCAG+AGG + chr6.4:15637485-15637504 None:intergenic 30.0%
TATCTCCATATACTTGTCAT+TGG + chr6.4:15637050-15637069 None:intergenic 30.0%
TGTATGAAGAAATGCTCAAA+TGG - chr6.4:15637491-15637510 MS.gene85863:CDS 30.0%
TTAAAAGACATACCGATAGT+AGG + chr6.4:15635681-15635700 None:intergenic 30.0%
TTATGAAATTGCAGAATGTG+CGG - chr6.4:15637441-15637460 MS.gene85863:CDS 30.0%
! AACATCACCAAAGTATTCAT+AGG + chr6.4:15636318-15636337 None:intergenic 30.0%
! CTTTTTCTATGAGATTGACA+TGG - chr6.4:15636238-15636257 MS.gene85863:CDS 30.0%
! TCATGTGCAGAATATTTTCT+GGG - chr6.4:15636271-15636290 MS.gene85863:CDS 30.0%
! TGCGTATCCTTTCAATTTTT+CGG + chr6.4:15636627-15636646 None:intergenic 30.0%
! TTAAAAAATGATTTCTGGGC+CGG - chr6.4:15636812-15636831 MS.gene85863:CDS 30.0%
! TTCATGTGCAGAATATTTTC+TGG - chr6.4:15636270-15636289 MS.gene85863:CDS 30.0%
!! AGTATTGTGTTGATTTCAAC+GGG - chr6.4:15637188-15637207 MS.gene85863:CDS 30.0%
!! ATAACGGTTGCTTTAAAGAA+GGG - chr6.4:15635903-15635922 MS.gene85863:CDS 30.0%
!! GACAATTTTGATAAACGATC+AGG - chr6.4:15636031-15636050 MS.gene85863:CDS 30.0%
!!! AGTATGAATGCTTTTTTCGA+TGG - chr6.4:15636860-15636879 MS.gene85863:CDS 30.0%
!!! TATGTGTGGTTGTAGTTTTT+TGG + chr6.4:15637392-15637411 None:intergenic 30.0%
AAAACCACTAGTTGACTGTT+GGG + chr6.4:15637926-15637945 None:intergenic 35.0%
AAAGGATACGCACAATACAA+AGG - chr6.4:15636635-15636654 MS.gene85863:CDS 35.0%
AAATGCAACTGTTATCTCGA+AGG - chr6.4:15637088-15637107 MS.gene85863:CDS 35.0%
ACATTACTTCCTATGTCTGA+TGG - chr6.4:15637862-15637881 MS.gene85863:CDS 35.0%
AGGTTGTGTTTCCTAATACT+AGG - chr6.4:15636564-15636583 MS.gene85863:CDS 35.0%
ATACTTGTCATTGGTGTACT+CGG + chr6.4:15637041-15637060 None:intergenic 35.0%
ATACTTGTTTGTCAAGTAGG+TGG + chr6.4:15636354-15636373 None:intergenic 35.0%
ATCCTACTTTGCTAGAATGA+GGG - chr6.4:15636202-15636221 MS.gene85863:CDS 35.0%
ATTGTGTGTATGATTCTCTG+CGG - chr6.4:15636678-15636697 MS.gene85863:CDS 35.0%
CAAATGGTCTAGCAATAAGT+TGG - chr6.4:15637507-15637526 MS.gene85863:CDS 35.0%
CATTACTTCCTATGTCTGAT+GGG - chr6.4:15637863-15637882 MS.gene85863:CDS 35.0%
CCACACATAGAAAGATTTGA+AGG - chr6.4:15637403-15637422 MS.gene85863:CDS 35.0%
CCTTCAAATCTTTCTATGTG+TGG + chr6.4:15637406-15637425 None:intergenic 35.0%
CGTGGCAAGATAAATTTAGA+CGG + chr6.4:15637316-15637335 None:intergenic 35.0%
CTAAATTTATCTTGCCACGA+TGG - chr6.4:15637317-15637336 MS.gene85863:CDS 35.0%
CTTGTTTCATGGCATATTCA+CGG + chr6.4:15635731-15635750 None:intergenic 35.0%
GAGATACAAGTAGAATTTCG+TGG - chr6.4:15637064-15637083 MS.gene85863:CDS 35.0%
GATAAATTCACGCCTACTAT+CGG - chr6.4:15635666-15635685 MS.gene85863:intron 35.0%
GGATTAAGAATTGGTTGATC+AGG + chr6.4:15637613-15637632 None:intergenic 35.0%
GTACACCAATGACAAGTATA+TGG - chr6.4:15637042-15637061 MS.gene85863:CDS 35.0%
GTCATACTTGTTTGTCAAGT+AGG + chr6.4:15636357-15636376 None:intergenic 35.0%
GTGAATATGCCATGAAACAA+GGG - chr6.4:15635730-15635749 MS.gene85863:intron 35.0%
TAAAACCACTAGTTGACTGT+TGG + chr6.4:15637927-15637946 None:intergenic 35.0%
TACAAATCAGAGGTTTGACT+AGG + chr6.4:15637475-15637494 None:intergenic 35.0%
TATCCTACTTTGCTAGAATG+AGG - chr6.4:15636201-15636220 MS.gene85863:CDS 35.0%
TCAGACATAGGAAGTAATGT+AGG + chr6.4:15637862-15637881 None:intergenic 35.0%
TGATGATTGACACCAACAAA+CGG + chr6.4:15636392-15636411 None:intergenic 35.0%
TGATTGCTCAGCTAAGATAA+CGG - chr6.4:15635887-15635906 MS.gene85863:CDS 35.0%
TGTTTCCTAATACTAGGCAT+AGG - chr6.4:15636570-15636589 MS.gene85863:CDS 35.0%
TTGAAATTGTCTCTCGATTG+TGG + chr6.4:15637017-15637036 None:intergenic 35.0%
! ATCTACATACACCGTTTTAG+AGG - chr6.4:15637132-15637151 MS.gene85863:CDS 35.0%
! ATGGTTTGGGTGAAAATGAT+TGG - chr6.4:15636744-15636763 MS.gene85863:CDS 35.0%
! ATTAGTTTACAGCCTCATTG+TGG - chr6.4:15637535-15637554 MS.gene85863:CDS 35.0%
! ATTCTAACTTGTGCAAGAGA+AGG - chr6.4:15635810-15635829 MS.gene85863:CDS 35.0%
! CAATCCATTTTACTAGGTTG+CGG - chr6.4:15636416-15636435 MS.gene85863:CDS 35.0%
! GACAATACTCTCCTCTAAAA+CGG + chr6.4:15637146-15637165 None:intergenic 35.0%
! TGAATACCATTTTCGAAGAG+CGG - chr6.4:15636768-15636787 MS.gene85863:CDS 35.0%
! TGTTAGATTTTCGTAACCAC+CGG + chr6.4:15636102-15636121 None:intergenic 35.0%
! TTCACATTTTTACTCCATCG+TGG + chr6.4:15637334-15637353 None:intergenic 35.0%
! TTGGTGGTATGTTTGATTCA+TGG + chr6.4:15635839-15635858 None:intergenic 35.0%
! TTTCACAATCTTTTCAGTGG+TGG + chr6.4:15637683-15637702 None:intergenic 35.0%
!! ATTTGTTGTTTCAAAGGTCC+CGG + chr6.4:15635634-15635653 None:intergenic 35.0%
!! ATTTTGATAAACGATCAGGC+AGG - chr6.4:15636035-15636054 MS.gene85863:CDS 35.0%
!! GACAGCATTTGTTGTTTCAA+AGG + chr6.4:15635640-15635659 None:intergenic 35.0%
!! GATAACGGTTGCTTTAAAGA+AGG - chr6.4:15635902-15635921 MS.gene85863:CDS 35.0%
!! GTATTGTGTTGATTTCAACG+GGG - chr6.4:15637189-15637208 MS.gene85863:CDS 35.0%
!! TTGCTTTAAAGAAGGGTCTA+TGG - chr6.4:15635910-15635929 MS.gene85863:CDS 35.0%
!! TTGTTGGTGTCAATCATCAT+GGG - chr6.4:15636393-15636412 MS.gene85863:CDS 35.0%
!! TTTGTTGGTGTCAATCATCA+TGG - chr6.4:15636392-15636411 MS.gene85863:CDS 35.0%
!!! GGGTTGATGATTTTGTTGTT+GGG - chr6.4:15636699-15636718 MS.gene85863:CDS 35.0%
!!! TTGATGATTTTGTTGTTGGG+TGG - chr6.4:15636702-15636721 MS.gene85863:CDS 35.0%
AAAACCAATTGTTTCGGTCG+TGG - chr6.4:15637726-15637745 MS.gene85863:CDS 40.0%
AAGACCGCAACCTAGTAAAA+TGG + chr6.4:15636423-15636442 None:intergenic 40.0%
AAGATACCAAGTCCTTTACC+TGG - chr6.4:15636453-15636472 MS.gene85863:CDS 40.0%
AATTGTAACCGATCAGTGCA+AGG - chr6.4:15636523-15636542 MS.gene85863:CDS 40.0%
ACTAAATCACGGTTGTTTGC+TGG - chr6.4:15635978-15635997 MS.gene85863:CDS 40.0%
AGATTGATATGCATGCACAG+CGG - chr6.4:15636009-15636028 MS.gene85863:CDS 40.0%
AGGTCTGCCTATGAATACTT+TGG - chr6.4:15636308-15636327 MS.gene85863:CDS 40.0%
ATGATTGACACCAACAAACG+GGG + chr6.4:15636390-15636409 None:intergenic 40.0%
CAAAAGAAAGACACCTTCTC+GGG - chr6.4:15636153-15636172 MS.gene85863:CDS 40.0%
CGTGAATATGCCATGAAACA+AGG - chr6.4:15635729-15635748 MS.gene85863:intron 40.0%
GAACAAAAGTTTCCGTTCCA+TGG - chr6.4:15636067-15636086 MS.gene85863:CDS 40.0%
GAGAGATGTCAGAAACTTTG+TGG - chr6.4:15636130-15636149 MS.gene85863:CDS 40.0%
GAGCAATCAAGTTTCTTCGT+TGG + chr6.4:15635876-15635895 None:intergenic 40.0%
GATGATTGACACCAACAAAC+GGG + chr6.4:15636391-15636410 None:intergenic 40.0%
GCAAAAGAAAGACACCTTCT+CGG - chr6.4:15636152-15636171 MS.gene85863:CDS 40.0%
GCAAACAACCGTGATTTAGT+TGG + chr6.4:15635978-15635997 None:intergenic 40.0%
GGATCATAGCTTAAACACGA+TGG - chr6.4:15637567-15637586 MS.gene85863:CDS 40.0%
GGATGATCGATCAATATAGG+AGG + chr6.4:15635552-15635571 None:intergenic 40.0%
GTTGGATTCGTCTTCAAAGT+TGG + chr6.4:15635858-15635877 None:intergenic 40.0%
TCAAGCACAATCATTCCATG+CGG - chr6.4:15636983-15637002 MS.gene85863:CDS 40.0%
TCATAGCTTAAACACGATGG+AGG - chr6.4:15637570-15637589 MS.gene85863:CDS 40.0%
TGATCGGTTACAATTCCCAT+TGG + chr6.4:15636518-15636537 None:intergenic 40.0%
TGCATCAATGAGCAAAGATG+TGG - chr6.4:15637957-15637976 MS.gene85863:CDS 40.0%
TGGTCATCTTAGAGTGAAAG+AGG - chr6.4:15637288-15637307 MS.gene85863:CDS 40.0%
TGTTTCGAACAACCAGGTAA+AGG + chr6.4:15636468-15636487 None:intergenic 40.0%
TTACCTGGTTGTTCGAAACA+TGG - chr6.4:15636468-15636487 MS.gene85863:CDS 40.0%
TTCCCTCATTCTAGCAAAGT+AGG + chr6.4:15636207-15636226 None:intergenic 40.0%
TTCCTAATACTAGGCATAGG+TGG - chr6.4:15636573-15636592 MS.gene85863:CDS 40.0%
TTGTGTGTATGATTCTCTGC+GGG - chr6.4:15636679-15636698 MS.gene85863:CDS 40.0%
! AGGAATACGAGGCAGATTTT+CGG - chr6.4:15636957-15636976 MS.gene85863:CDS 40.0%
! CATGGGCAATCCATTTTACT+AGG - chr6.4:15636410-15636429 MS.gene85863:CDS 40.0%
! CCCTTACGTGGTACTTTTAA+CGG + chr6.4:15637634-15637653 None:intergenic 40.0%
! GAATACCATTTTCGAAGAGC+GGG - chr6.4:15636769-15636788 MS.gene85863:CDS 40.0%
!! AGACATTCGCTTTTCGTACT+TGG - chr6.4:15637268-15637287 MS.gene85863:CDS 40.0%
!! ATTCCTTTTCAGCCTTGTCT+TGG + chr6.4:15636943-15636962 None:intergenic 40.0%
!! CCGTTAAAAGTACCACGTAA+GGG - chr6.4:15637631-15637650 MS.gene85863:CDS 40.0%
!! TCCGTTAAAAGTACCACGTA+AGG - chr6.4:15637630-15637649 MS.gene85863:CDS 40.0%
!! TGTTTGCTGTTTGAGTTCAG+AGG - chr6.4:15637235-15637254 MS.gene85863:CDS 40.0%
!! TTAGAGGAGAGTATTGTCTG+TGG - chr6.4:15637148-15637167 MS.gene85863:CDS 40.0%
!!! CGGGTTGATGATTTTGTTGT+TGG - chr6.4:15636698-15636717 MS.gene85863:CDS 40.0%
ACTCCAAGACAAGGCTGAAA+AGG - chr6.4:15636937-15636956 MS.gene85863:CDS 45.0%
ACTTCCACGACCGAAACAAT+TGG + chr6.4:15637733-15637752 None:intergenic 45.0%
ATTGTGGAATTTGACCCGCA+TGG + chr6.4:15637001-15637020 None:intergenic 45.0%
CAAGCACAATCATTCCATGC+GGG - chr6.4:15636984-15637003 MS.gene85863:CDS 45.0%
CAAGGCTGAAAAGGAATACG+AGG - chr6.4:15636946-15636965 MS.gene85863:CDS 45.0%
CACCACCTATGCCTAGTATT+AGG + chr6.4:15636578-15636597 None:intergenic 45.0%
CATCCTTTATTACCCCGTGA+CGG - chr6.4:15635567-15635586 MS.gene85863:CDS 45.0%
CTATGAGATTGACATGGACG+AGG - chr6.4:15636244-15636263 MS.gene85863:CDS 45.0%
GAACAACCAGGTAAAGGACT+TGG + chr6.4:15636462-15636481 None:intergenic 45.0%
GCTTGAAACCCATCAGACAT+AGG + chr6.4:15637874-15637893 None:intergenic 45.0%
GGATTCGTCTTCAAAGTTGG+TGG + chr6.4:15635855-15635874 None:intergenic 45.0%
GGCTATGCAGAATGCAATTC+AGG - chr6.4:15636544-15636563 MS.gene85863:CDS 45.0%
GGTTGTTCGAAACATGGCTA+AGG - chr6.4:15636474-15636493 MS.gene85863:CDS 45.0%
GTAGTTAAGCGTATCACCGT+AGG + chr6.4:15637896-15637915 None:intergenic 45.0%
TAAACGATCAGGCAGGTGTA+CGG - chr6.4:15636042-15636061 MS.gene85863:CDS 45.0%
TAGCCATGTTTCGAACAACC+AGG + chr6.4:15636474-15636493 None:intergenic 45.0%
TCATCCCAACAGTCAACTAG+TGG - chr6.4:15637919-15637938 MS.gene85863:CDS 45.0%
TCGGTTACAATTCCCATTGG+AGG + chr6.4:15636515-15636534 None:intergenic 45.0%
TCTTTCCCGCTCTTCGAAAA+TGG + chr6.4:15636777-15636796 None:intergenic 45.0%
TTACAGCCTCATTGTGGTGT+GGG - chr6.4:15637541-15637560 MS.gene85863:CDS 45.0%
TTTACAGCCTCATTGTGGTG+TGG - chr6.4:15637540-15637559 MS.gene85863:CDS 45.0%
TTTCGAAGAGCGGGAAAGAT+GGG - chr6.4:15636778-15636797 MS.gene85863:CDS 45.0%
TTTCGGTCGTGGAAGTAAGT+TGG - chr6.4:15637737-15637756 MS.gene85863:CDS 45.0%
! AACTCTAAGAAAGGGTCCGA+TGG - chr6.4:15635771-15635790 MS.gene85863:intron 45.0%
! CCTCTGTGTTGTTGACATTC+CGG + chr6.4:15636834-15636853 None:intergenic 45.0%
! GATCGCAAACCCTTGTTTCA+TGG + chr6.4:15635742-15635761 None:intergenic 45.0%
! TCTCGAAGGTGTGACTACAT+TGG - chr6.4:15637102-15637121 MS.gene85863:CDS 45.0%
! TTTTCGAAGAGCGGGAAAGA+TGG - chr6.4:15636777-15636796 MS.gene85863:CDS 45.0%
!! TCTGATGGGTTTCAAGCCTA+CGG - chr6.4:15637877-15637896 MS.gene85863:CDS 45.0%
AAACGATCAGGCAGGTGTAC+GGG - chr6.4:15636043-15636062 MS.gene85863:CDS 50.0%
ACACCAACAAACGGGGCAAA+TGG + chr6.4:15636383-15636402 None:intergenic 50.0%
AGAAAGACACCTTCTCGGGA+AGG - chr6.4:15636157-15636176 MS.gene85863:CDS 50.0%
ATGTCTTCGAGGCCTCCAAT+GGG - chr6.4:15636500-15636519 MS.gene85863:CDS 50.0%
CCGGAATGTCAACAACACAG+AGG - chr6.4:15636831-15636850 MS.gene85863:CDS 50.0%
CGGCATCACATACCATGGAA+CGG + chr6.4:15636082-15636101 None:intergenic 50.0%
CGTTCCATGGTATGTGATGC+CGG - chr6.4:15636080-15636099 MS.gene85863:CDS 50.0%
CTAGGCATAGGTGGTGTCTA+TGG - chr6.4:15636582-15636601 MS.gene85863:CDS 50.0%
GGCTAAGGTGTATGTCTTCG+AGG - chr6.4:15636489-15636508 MS.gene85863:CDS 50.0%
TATGTCTTCGAGGCCTCCAA+TGG - chr6.4:15636499-15636518 MS.gene85863:CDS 50.0%
TCTCCGTCACGGGGTAATAA+AGG + chr6.4:15635573-15635592 None:intergenic 50.0%
! ATGCCATTTGCCCCGTTTGT+TGG - chr6.4:15636377-15636396 MS.gene85863:CDS 50.0%
! CGTGTTGACGTTTCGGATTC+CGG - chr6.4:15635612-15635631 MS.gene85863:intron 50.0%
! CTGCATAGCCTTGCACTGAT+CGG + chr6.4:15636534-15636553 None:intergenic 50.0%
! GTGTTGACGTTTCGGATTCC+GGG - chr6.4:15635613-15635632 MS.gene85863:intron 50.0%
! TGCTGCTCGTGTTGACGTTT+CGG - chr6.4:15635605-15635624 MS.gene85863:intron 50.0%
ACCACCGGCATCACATACCA+TGG + chr6.4:15636087-15636106 None:intergenic 55.0%
AGACACCTTCTCGGGAAGGA+AGG - chr6.4:15636161-15636180 MS.gene85863:CDS 55.0%
AGCCTCATTGTGGTGTGGGA+GGG - chr6.4:15637545-15637564 MS.gene85863:CDS 55.0%
CATCTCCTTCCTTCCCGAGA+AGG + chr6.4:15636169-15636188 None:intergenic 55.0%
CGACAACGCACTCCAAGACA+AGG - chr6.4:15636928-15636947 MS.gene85863:CDS 55.0%
CTTCTCGGGAAGGAAGGAGA+TGG - chr6.4:15636167-15636186 MS.gene85863:CDS 55.0%
GACGTCCTCGAACCAATCGT+CGG - chr6.4:15637653-15637672 MS.gene85863:CDS 55.0%
TCCATGGTATGTGATGCCGG+TGG - chr6.4:15636083-15636102 MS.gene85863:CDS 55.0%
TCTGGGCTGATGCACGTAGT+AGG - chr6.4:15636288-15636307 MS.gene85863:CDS 55.0%
! ATCAGCTAGCTCTCCGTCAC+GGG + chr6.4:15635583-15635602 None:intergenic 55.0%
! CATCAGCTAGCTCTCCGTCA+CGG + chr6.4:15635584-15635603 None:intergenic 55.0%
!! AGTGGTGGACAACCGACGAT+TGG + chr6.4:15637668-15637687 None:intergenic 55.0%
!! GACAACCGACGATTGGTTCG+AGG + chr6.4:15637661-15637680 None:intergenic 55.0%
CAGCCTCATTGTGGTGTGGG+AGG - chr6.4:15637544-15637563 MS.gene85863:CDS 60.0%
CGGGAAGGAAGGAGATGGCA+GGG - chr6.4:15636172-15636191 MS.gene85863:CDS 60.0%
GCCTCATTGTGGTGTGGGAG+GGG - chr6.4:15637546-15637565 MS.gene85863:CDS 60.0%
GTTCGAGGACGTCCCTTACG+TGG + chr6.4:15637646-15637665 None:intergenic 60.0%
TCCCCTCCCACACCACAATG+AGG + chr6.4:15637550-15637569 None:intergenic 60.0%
TCGGGAAGGAAGGAGATGGC+AGG - chr6.4:15636171-15636190 MS.gene85863:CDS 60.0%
! CGTGACGGAGAGCTAGCTGA+TGG - chr6.4:15635582-15635601 MS.gene85863:CDS 60.0%
! TCAGCTAGCTCTCCGTCACG+GGG + chr6.4:15635582-15635601 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 15635537 15637996 15635537 ID=MS.gene85863
chr6.4 mRNA 15635537 15637996 15635537 ID=MS.gene85863.t1;Parent=MS.gene85863
chr6.4 exon 15635783 15637996 15635783 ID=MS.gene85863.t1.exon1;Parent=MS.gene85863.t1
chr6.4 CDS 15635783 15637996 15635783 ID=cds.MS.gene85863.t1;Parent=MS.gene85863.t1
chr6.4 exon 15635537 15635602 15635537 ID=MS.gene85863.t1.exon2;Parent=MS.gene85863.t1
chr6.4 CDS 15635537 15635602 15635537 ID=cds.MS.gene85863.t1;Parent=MS.gene85863.t1
Gene Sequence

>MS.gene85863

ATGGCTGATGGTCCTCCTATATTGATCGATCATCCTTTATTACCCCGTGACGGAGAGCTAGCTGATGGTGCTGCTCGTGTTGACGTTTCGGATTCCGGGACCTTTGAAACAACAAATGCTGTCGCAACAGATAAATTCACGCCTACTATCGGTATGTCTTTTAAATCGGTTGCAGATTGTAAGTCTTTTTACCGTGAATATGCCATGAAACAAGGGTTTGCGATCAAAACTAGAAACTCTAAGAAAGGGTCCGATGGCATGTTAAAATATTTCATTCTAACTTGTGCAAGAGAAGGTCACCATGAATCAAACATACCACCAACTTTGAAGACGAATCCAACGAAGAAACTTGATTGCTCAGCTAAGATAACGGTTGCTTTAAAGAAGGGTCTATGGACTATTTTGTCTTTTAATTCATGTCATAATCATGAGATAAGTCCAACTAAATCACGGTTGTTTGCTGGCAATAAGAAGATTGATATGCATGCACAGCGGACAATTTTGATAAACGATCAGGCAGGTGTACGGGTGAACAAAAGTTTCCGTTCCATGGTATGTGATGCCGGTGGTTACGAAAATCTAACATTTGTGGAGAGAGATGTCAGAAACTTTGTGGCAAAAGAAAGACACCTTCTCGGGAAGGAAGGAGATGGCAGGGCACTTTTATCCTACTTTGCTAGAATGAGGGAATGCAACAAAGACTTTTTCTATGAGATTGACATGGACGAGGACTTTCATGTGCAGAATATTTTCTGGGCTGATGCACGTAGTAGGTCTGCCTATGAATACTTTGGTGATGTTGTCACGTTCGATACCACCTACTTGACAAACAAGTATGACATGCCATTTGCCCCGTTTGTTGGTGTCAATCATCATGGGCAATCCATTTTACTAGGTTGCGGTCTTTTATCAGCTGAAGATACCAAGTCCTTTACCTGGTTGTTCGAAACATGGCTAAGGTGTATGTCTTCGAGGCCTCCAATGGGAATTGTAACCGATCAGTGCAAGGCTATGCAGAATGCAATTCAGGTTGTGTTTCCTAATACTAGGCATAGGTGGTGTCTATGGCATATAATGAGAAAAATTGCCGAAAAATTGAAAGGATACGCACAATACAAAGGAATAAAAAATGATATGAAAAATTGTGTGTATGATTCTCTGCGGGTTGATGATTTTGTTGTTGGGTGGACAACATTCATTGAAAAATATGGTTTGGGTGAAAATGATTGGTTGAATACCATTTTCGAAGAGCGGGAAAGATGGGTGCCATGTTATTTAAAAAATGATTTCTGGGCCGGAATGTCAACAACACAGAGGAGTGAAAGTATGAATGCTTTTTTCGATGGTTACATTAATGCAAGAACTTCTCTAAGCGAATTTGTAAAGCAATACGACAACGCACTCCAAGACAAGGCTGAAAAGGAATACGAGGCAGATTTTCGGTCTTCAAGCACAATCATTCCATGCGGGTCAAATTCCACAATCGAGAGACAATTTCAAGCCGAGTACACCAATGACAAGTATATGGAGATACAAGTAGAATTTCGTGGGAAATGCAACTGTTATCTCGAAGGTGTGACTACATTGGAATTTACATCTACATACACCGTTTTAGAGGAGAGTATTGTCTGTGGTAAACCGAACGAAACTAAGTATTGTGTTGATTTCAACGGGGAAGACAATAATGTTACGTGCACTTGTTTGCTGTTTGAGTTCAGAGGCATTTTGTGTAGACATTCGCTTTTCGTACTTGGTCATCTTAGAGTGAAAGAGGTTCCGTCTAAATTTATCTTGCCACGATGGAGTAAAAATGTGAAGAGAAAATATGCACACATGAAGACAAGTTACAATGCCAAAAAACTACAACCACACATAGAAAGATTTGAAGGTCTTTGCAAGACATTTTATGAAATTGCAGAATGTGCGGCTGAGACACCTAGTCAAACCTCTGATTTGTATGAAGAAATGCTCAAATGGTCTAGCAATAAGTTGGGCAAAATTAGTTTACAGCCTCATTGTGGTGTGGGAGGGGATCATAGCTTAAACACGATGGAGGACTCATTATCACAGCAACCTGATCAACCAATTCTTAATCCGTTAAAAGTACCACGTAAGGGACGTCCTCGAACCAATCGTCGGTTGTCCACCACTGAAAAGATTGTGAAAAAAAGAAGTAAAATGCAAAGAAAAAAACCAATTGTTTCGGTCGTGGAAGTAAGTTGGTGTTAACCTATTATTATTGCGATTACATTTGTTTTTTTAATAGTAATACAGTGTTAATTATGTTAAATGTAATTAATATTTCACTCTGTAATACTACAACCTACATTACTTCCTATGTCTGATGGGTTTCAAGCCTACGGTGATACGCTTAACTACTTCTCATCCCAACAGTCAACTAGTGGTTTTATGTCGTCACTTGCATCAATGAGCAAAGATGTGGACGCAGCTGAATTTTAA
Protein sequence

>MS.gene85863.t1

MADGPPILIDHPLLPRDGELADGAARVDVSDSGTFETTNAVATDKFTPTIGMSFKSVADCKSFYREYAMKQGFAIKTRNSKKGSDGMLKYFILTCAREGHHESNIPPTLKTNPTKKLDCSAKITVALKKGLWTILSFNSCHNHEISPTKSRLFAGNKKIDMHAQRTILINDQAGVRVNKSFRSMVCDAGGYENLTFVERDVRNFVAKERHLLGKEGDGRALLSYFARMRECNKDFFYEIDMDEDFHVQNIFWADARSRSAYEYFGDVVTFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLLSAEDTKSFTWLFETWLRCMSSRPPMGIVTDQCKAMQNAIQVVFPNTRHRWCLWHIMRKIAEKLKGYAQYKGIKNDMKNCVYDSLRVDDFVVGWTTFIEKYGLGENDWLNTIFEERERWVPCYLKNDFWAGMSTTQRSESMNAFFDGYINARTSLSEFVKQYDNALQDKAEKEYEADFRSSSTIIPCGSNSTIERQFQAEYTNDKYMEIQVEFRGKCNCYLEGVTTLEFTSTYTVLEESIVCGKPNETKYCVDFNGEDNNVTCTCLLFEFRGILCRHSLFVLGHLRVKEVPSKFILPRWSKNVKRKYAHMKTSYNAKKLQPHIERFEGLCKTFYEIAECAAETPSQTSDLYEEMLKWSSNKLGKISLQPHCGVGGDHSLNTMEDSLSQQPDQPILNPLKVPRKGRPRTNRRLSTTEKIVKKRSKMQRKKPIVSVVESTSGFMSSLASMSKDVDAAEF