Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86568.t1 | AES95291.1 | 92.8 | 208 | 14 | 1 | 1 | 207 | 1 | 208 | 8.20E-93 | 350.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86568.t1 | O65499 | 42.6 | 68 | 37 | 1 | 111 | 178 | 73 | 138 | 5.9e-07 | 56.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86568.t1 | G7K024 | 92.8 | 208 | 14 | 1 | 1 | 207 | 1 | 208 | 5.9e-93 | 350.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene86568.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86568.t1 | MTR_5g023910 | 93.966 | 232 | 13 | 1 | 1 | 231 | 1 | 232 | 9.13e-149 | 415 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86568.t1 | AT4G35700 | 32.432 | 185 | 102 | 7 | 75 | 245 | 98 | 273 | 1.41e-17 | 80.1 |
| MS.gene86568.t1 | AT4G35610 | 54.000 | 50 | 23 | 0 | 106 | 155 | 129 | 178 | 1.86e-13 | 68.6 |
Find 97 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGTTTCATCATCCTCTTC+TGG | 0.204274 | 5.1:-14599139 | None:intergenic |
| GTGGCTGGTGTGGTGTTGTT+TGG | 0.232681 | 5.1:-14597747 | None:intergenic |
| GCATCCAGAGCGTGCTCATC+GGG | 0.273262 | 5.1:+14598124 | MS.gene86568:CDS |
| GCAAACTCCCTCTTGCATTC+TGG | 0.280646 | 5.1:-14598068 | None:intergenic |
| TCTTGCATTCTGGACATGTT+GGG | 0.316539 | 5.1:-14598058 | None:intergenic |
| GCCTGTGCAGGTGCTGGTGC+AGG | 0.337756 | 5.1:-14599064 | None:intergenic |
| CAGATGAACCGTCGGCGGTT+AGG | 0.343790 | 5.1:-14597956 | None:intergenic |
| TGGCTGGTGTGGTGTTGTTT+GGG | 0.349412 | 5.1:-14597746 | None:intergenic |
| AGATGAACCGTCGGCGGTTA+GGG | 0.352002 | 5.1:-14597955 | None:intergenic |
| GCCACATGGAAAGCTGCGTT+TGG | 0.354309 | 5.1:+14598089 | MS.gene86568:CDS |
| CTCTTGCATTCTGGACATGT+TGG | 0.358689 | 5.1:-14598059 | None:intergenic |
| GTGCAGGTGCAGGTGCTGCT+TGG | 0.361541 | 5.1:-14599048 | None:intergenic |
| GTTGTTTGGGCTTGACTCAT+TGG | 0.370557 | 5.1:-14597733 | None:intergenic |
| GCAGGTGCTGGTGCAGGTGC+AGG | 0.380038 | 5.1:-14599058 | None:intergenic |
| TACCCTCATCACCACCATTT+GGG | 0.382708 | 5.1:-14597896 | None:intergenic |
| CAGAGGACCCTGCGGTTGAT+TGG | 0.396020 | 5.1:-14598994 | None:intergenic |
| CTGATGGAGGGTCTTTCACT+TGG | 0.398758 | 5.1:-14598031 | None:intergenic |
| CCACATGGAAAGCTGCGTTT+GGG | 0.399070 | 5.1:+14598090 | MS.gene86568:CDS |
| TTACCCTCATCACCACCATT+TGG | 0.414014 | 5.1:-14597897 | None:intergenic |
| TTTGGGCTTGACTCATTGGC+AGG | 0.414848 | 5.1:-14597729 | None:intergenic |
| TCTTCATTCGCAGCCTGTGC+AGG | 0.416854 | 5.1:-14599076 | None:intergenic |
| GGGTCCTCTGCTGGTGGTAG+TGG | 0.416926 | 5.1:+14599007 | MS.gene86568:CDS |
| TTCGCAGCCTGTGCAGGTGC+TGG | 0.419505 | 5.1:-14599070 | None:intergenic |
| ATCATCATCGTCAGTTAGTT+CGG | 0.423637 | 5.1:-14597865 | None:intergenic |
| GACCATCAGAACCAACTTGT+TGG | 0.436035 | 5.1:-14597983 | None:intergenic |
| TCCTCAGTGTTTGTCACAGC+GGG | 0.444401 | 5.1:-14597807 | None:intergenic |
| TCATCATCCTCTTCTGGAGG+TGG | 0.459723 | 5.1:-14599133 | None:intergenic |
| ATGGTCATGTCTTCAAGAAA+AGG | 0.461097 | 5.1:+14598000 | MS.gene86568:CDS |
| GTTCAGCCAAGGTGCGTTGA+GGG | 0.469269 | 5.1:-14597773 | None:intergenic |
| TTGTTTACAGGTGATGGTCT+TGG | 0.469520 | 5.1:+14598905 | MS.gene86568:intron |
| ATCCAACAAGTTGGTTCTGA+TGG | 0.472826 | 5.1:+14597981 | MS.gene86568:CDS |
| GAAAACACCGGAGGAAGTCC+TGG | 0.473695 | 5.1:+14597842 | MS.gene86568:CDS |
| CAAGGTGCGTTGAGGGGAAG+TGG | 0.482830 | 5.1:-14597766 | None:intergenic |
| TCAACCGCAGGGTCCTCTGC+TGG | 0.483755 | 5.1:+14598998 | MS.gene86568:CDS |
| ACCTGCACCAGCACCTGCAC+AGG | 0.490472 | 5.1:+14599063 | MS.gene86568:CDS |
| TATATACCCTCAGCAGGAAC+GGG | 0.491670 | 5.1:-14598182 | None:intergenic |
| GAATGAAGAAAGACGGAGAC+GGG | 0.497570 | 5.1:+14599090 | MS.gene86568:CDS |
| CACTTCCCCTCAACGCACCT+TGG | 0.498843 | 5.1:+14597767 | MS.gene86568:CDS |
| CATGTTGGGGATCCTGATGG+AGG | 0.503638 | 5.1:-14598044 | None:intergenic |
| GGACATGTTGGGGATCCTGA+TGG | 0.504468 | 5.1:-14598047 | None:intergenic |
| CTTGCATTCTGGACATGTTG+GGG | 0.506162 | 5.1:-14598057 | None:intergenic |
| CAAGTGAAAGACCCTCCATC+AGG | 0.513855 | 5.1:+14598032 | MS.gene86568:CDS |
| GTGCGTTGAGGGGAAGTGGC+TGG | 0.516360 | 5.1:-14597762 | None:intergenic |
| CTTGGCGACAAGATCAATGA+AGG | 0.517419 | 5.1:+14598923 | MS.gene86568:CDS |
| AGCATCCAGAGCGTGCTCAT+CGG | 0.517955 | 5.1:+14598123 | MS.gene86568:CDS |
| AATATATATATACCCTCAGC+AGG | 0.524532 | 5.1:-14598188 | None:intergenic |
| CGTTGCACCCGTTCCTGCTG+AGG | 0.526903 | 5.1:+14598175 | MS.gene86568:CDS |
| GATGATGATTTGATCCCAAA+TGG | 0.535324 | 5.1:+14597882 | MS.gene86568:CDS |
| TCATCTGTTATCCAACAAGT+TGG | 0.537358 | 5.1:+14597972 | MS.gene86568:CDS |
| GTTTCATCATCCTCTTCTGG+AGG | 0.539642 | 5.1:-14599136 | None:intergenic |
| ATGTTGGGGATCCTGATGGA+GGG | 0.546248 | 5.1:-14598043 | None:intergenic |
| ATATATACCCTCAGCAGGAA+CGG | 0.548442 | 5.1:-14598183 | None:intergenic |
| AGTTCGGCCAGGACTTCCTC+CGG | 0.548973 | 5.1:-14597849 | None:intergenic |
| CATCGTCAGTTAGTTCGGCC+AGG | 0.555694 | 5.1:-14597860 | None:intergenic |
| TTGAGGGGAAGTGGCTGGTG+TGG | 0.560312 | 5.1:-14597757 | None:intergenic |
| ATGAGGGTAACGAAGACGAT+GGG | 0.560313 | 5.1:+14597910 | MS.gene86568:CDS |
| AGATCGATCCAATCAACCGC+AGG | 0.563542 | 5.1:+14598986 | MS.gene86568:CDS |
| CGAGTTGCCACCTCCAGAAG+AGG | 0.565350 | 5.1:+14599126 | MS.gene86568:CDS |
| GGTGCAACGGTGCTAAAAGT+TGG | 0.571929 | 5.1:-14598161 | None:intergenic |
| CTCAGCAGGAACGGGTGCAA+CGG | 0.574361 | 5.1:-14598174 | None:intergenic |
| GTTGCACCCGTTCCTGCTGA+GGG | 0.581395 | 5.1:+14598176 | MS.gene86568:CDS |
| TCAGTGTTTGTCACAGCGGG+TGG | 0.591498 | 5.1:-14597804 | None:intergenic |
| GCAACGGTGCTAAAAGTTGG+TGG | 0.591524 | 5.1:-14598158 | None:intergenic |
| ACCGCAGGGTCCTCTGCTGG+TGG | 0.592667 | 5.1:+14599001 | MS.gene86568:CDS |
| CATGTCTTCAAGAAAAGGAA+AGG | 0.594271 | 5.1:+14598005 | MS.gene86568:CDS |
| ATCCAGAGCGTGCTCATCGG+GGG | 0.598304 | 5.1:+14598126 | MS.gene86568:CDS |
| ACGGTGCTAAAAGTTGGTGG+AGG | 0.599469 | 5.1:-14598155 | None:intergenic |
| TTCAGCCAAGGTGCGTTGAG+GGG | 0.602294 | 5.1:-14597772 | None:intergenic |
| TTGGGCTTGACTCATTGGCA+GGG | 0.602976 | 5.1:-14597728 | None:intergenic |
| TGTTCAGCCAAGGTGCGTTG+AGG | 0.606127 | 5.1:-14597774 | None:intergenic |
| ATCCCAAATGGTGGTGATGA+GGG | 0.607792 | 5.1:+14597894 | MS.gene86568:CDS |
| CAACATGTCCAGAATGCAAG+AGG | 0.611183 | 5.1:+14598060 | MS.gene86568:CDS |
| TGGCTGATCATGTTCAGCCA+AGG | 0.612094 | 5.1:-14597784 | None:intergenic |
| TGGTAGTGGTCATATCACTA+AGG | 0.615054 | 5.1:+14599021 | MS.gene86568:CDS |
| TGAAACCTCTCTGAAAACAC+CGG | 0.622863 | 5.1:+14597830 | MS.gene86568:CDS |
| TTGGCGACAAGATCAATGAA+GGG | 0.623712 | 5.1:+14598924 | MS.gene86568:CDS |
| AGGCTGCGAATGAAGAAAGA+CGG | 0.625340 | 5.1:+14599083 | MS.gene86568:CDS |
| GATCCCAAATGGTGGTGATG+AGG | 0.627502 | 5.1:+14597893 | MS.gene86568:CDS |
| ATCCTCAGTGTTTGTCACAG+CGG | 0.628423 | 5.1:-14597808 | None:intergenic |
| GTTATCGCCCTAACCGCCGA+CGG | 0.632104 | 5.1:+14597948 | MS.gene86568:CDS |
| CGGTGCTAAAAGTTGGTGGA+GGG | 0.635586 | 5.1:-14598154 | None:intergenic |
| GCAAGAGGGAGTTTGCCACA+TGG | 0.640414 | 5.1:+14598075 | MS.gene86568:CDS |
| ATGACCACTACCACCAGCAG+AGG | 0.645607 | 5.1:-14599011 | None:intergenic |
| CGAATGAAGAAAGACGGAGA+CGG | 0.650910 | 5.1:+14599089 | MS.gene86568:CDS |
| CATCCAGAGCGTGCTCATCG+GGG | 0.656726 | 5.1:+14598125 | MS.gene86568:CDS |
| GATAACAGATGAACCGTCGG+CGG | 0.660015 | 5.1:-14597961 | None:intergenic |
| GATCGATCCAATCAACCGCA+GGG | 0.660372 | 5.1:+14598987 | MS.gene86568:CDS |
| TTGGATAACAGATGAACCGT+CGG | 0.663771 | 5.1:-14597964 | None:intergenic |
| TGGCGACAAGATCAATGAAG+GGG | 0.669025 | 5.1:+14598925 | MS.gene86568:CDS |
| GATGAGGGTAACGAAGACGA+TGG | 0.673127 | 5.1:+14597909 | MS.gene86568:CDS |
| CCCAAACGCAGCTTTCCATG+TGG | 0.686185 | 5.1:-14598090 | None:intergenic |
| AACATGTCCAGAATGCAAGA+GGG | 0.691308 | 5.1:+14598061 | MS.gene86568:CDS |
| TGAGGGTAACGAAGACGATG+GGG | 0.697277 | 5.1:+14597911 | MS.gene86568:CDS |
| AACCTCTCTGAAAACACCGG+AGG | 0.709220 | 5.1:+14597833 | MS.gene86568:CDS |
| ACCACCAGCAGAGGACCCTG+CGG | 0.721168 | 5.1:-14599002 | None:intergenic |
| GATGATTTGATCCCAAATGG+TGG | 0.741325 | 5.1:+14597885 | MS.gene86568:CDS |
| ACCCGCTGTGACAAACACTG+AGG | 0.799006 | 5.1:+14597806 | MS.gene86568:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTAGATCTAAATCA+TGG | - | chr5.1:14598369-14598388 | None:intergenic | 15.0% |
| !! | ATAAGACTATATATATAGCT+AGG | - | chr5.1:14598221-14598240 | None:intergenic | 20.0% |
| !! | CTAAAACATTCAATTTGAAT+AGG | - | chr5.1:14598613-14598632 | None:intergenic | 20.0% |
| !! | TAAGACTATATATATAGCTA+GGG | - | chr5.1:14598220-14598239 | None:intergenic | 20.0% |
| !!! | AAAACATCTCAATTATCTTT+TGG | - | chr5.1:14598400-14598419 | None:intergenic | 20.0% |
| !!! | AGATTTTGATGTTTTAGTTA+TGG | + | chr5.1:14598265-14598284 | MS.gene86568:intron | 20.0% |
| !! | GAGATGTTTTATGAAAAGTA+TGG | + | chr5.1:14598339-14598358 | MS.gene86568:intron | 25.0% |
| !!! | AAATCAGTTTGTTAAAAGAG+TGG | - | chr5.1:14598747-14598766 | None:intergenic | 25.0% |
| AATATATATATACCCTCAGC+AGG | - | chr5.1:14598191-14598210 | None:intergenic | 30.0% | |
| ATAAAGCACACACTCATATA+AGG | - | chr5.1:14598870-14598889 | None:intergenic | 30.0% | |
| TTACGTCGTTAATTGTTTAC+AGG | + | chr5.1:14598893-14598912 | MS.gene86568:intron | 30.0% | |
| ! | ACATCTCAATTATCTTTTGG+TGG | - | chr5.1:14598397-14598416 | None:intergenic | 30.0% |
| !!! | GCTATTTTCATTAGCTTTTC+AGG | - | chr5.1:14598586-14598605 | None:intergenic | 30.0% |
| ATCATCATCGTCAGTTAGTT+CGG | - | chr5.1:14597868-14597887 | None:intergenic | 35.0% | |
| ATGGTCATGTCTTCAAGAAA+AGG | + | chr5.1:14598000-14598019 | MS.gene86568:CDS | 35.0% | |
| CATGTCTTCAAGAAAAGGAA+AGG | + | chr5.1:14598005-14598024 | MS.gene86568:CDS | 35.0% | |
| CGTTAATTGTTTACAGGTGA+TGG | + | chr5.1:14598899-14598918 | MS.gene86568:intron | 35.0% | |
| GATGATGATTTGATCCCAAA+TGG | + | chr5.1:14597882-14597901 | MS.gene86568:CDS | 35.0% | |
| TCATCTGTTATCCAACAAGT+TGG | + | chr5.1:14597972-14597991 | MS.gene86568:CDS | 35.0% | |
| AACATGTCCAGAATGCAAGA+GGG | + | chr5.1:14598061-14598080 | MS.gene86568:CDS | 40.0% | |
| ATATATACCCTCAGCAGGAA+CGG | - | chr5.1:14598186-14598205 | None:intergenic | 40.0% | |
| GATGATTTGATCCCAAATGG+TGG | + | chr5.1:14597885-14597904 | MS.gene86568:CDS | 40.0% | |
| TCTGTTTCATCATCCTCTTC+TGG | - | chr5.1:14599142-14599161 | None:intergenic | 40.0% | |
| TCTTGCATTCTGGACATGTT+GGG | - | chr5.1:14598061-14598080 | None:intergenic | 40.0% | |
| TTGGATAACAGATGAACCGT+CGG | - | chr5.1:14597967-14597986 | None:intergenic | 40.0% | |
| TTGGCGACAAGATCAATGAA+GGG | + | chr5.1:14598924-14598943 | MS.gene86568:CDS | 40.0% | |
| ! | TGAAACCTCTCTGAAAACAC+CGG | + | chr5.1:14597830-14597849 | MS.gene86568:CDS | 40.0% |
| ! | TTGTTTACAGGTGATGGTCT+TGG | + | chr5.1:14598905-14598924 | MS.gene86568:intron | 40.0% |
| !! | ATCCAACAAGTTGGTTCTGA+TGG | + | chr5.1:14597981-14598000 | MS.gene86568:CDS | 40.0% |
| !! | TGGTAGTGGTCATATCACTA+AGG | + | chr5.1:14599021-14599040 | MS.gene86568:CDS | 40.0% |
| AGGCTGCGAATGAAGAAAGA+CGG | + | chr5.1:14599083-14599102 | MS.gene86568:CDS | 45.0% | |
| ATCCTCAGTGTTTGTCACAG+CGG | - | chr5.1:14597811-14597830 | None:intergenic | 45.0% | |
| ATGAGGGTAACGAAGACGAT+GGG | + | chr5.1:14597910-14597929 | MS.gene86568:CDS | 45.0% | |
| CAACATGTCCAGAATGCAAG+AGG | + | chr5.1:14598060-14598079 | MS.gene86568:CDS | 45.0% | |
| CGAATGAAGAAAGACGGAGA+CGG | + | chr5.1:14599089-14599108 | MS.gene86568:CDS | 45.0% | |
| CTCTTGCATTCTGGACATGT+TGG | - | chr5.1:14598062-14598081 | None:intergenic | 45.0% | |
| CTTGCATTCTGGACATGTTG+GGG | - | chr5.1:14598060-14598079 | None:intergenic | 45.0% | |
| CTTGGCGACAAGATCAATGA+AGG | + | chr5.1:14598923-14598942 | MS.gene86568:CDS | 45.0% | |
| GAATGAAGAAAGACGGAGAC+GGG | + | chr5.1:14599090-14599109 | MS.gene86568:CDS | 45.0% | |
| GACCATCAGAACCAACTTGT+TGG | - | chr5.1:14597986-14598005 | None:intergenic | 45.0% | |
| GTTGTTTGGGCTTGACTCAT+TGG | - | chr5.1:14597736-14597755 | None:intergenic | 45.0% | |
| GTTTCATCATCCTCTTCTGG+AGG | - | chr5.1:14599139-14599158 | None:intergenic | 45.0% | |
| TACCCTCATCACCACCATTT+GGG | - | chr5.1:14597899-14597918 | None:intergenic | 45.0% | |
| TATATACCCTCAGCAGGAAC+GGG | - | chr5.1:14598185-14598204 | None:intergenic | 45.0% | |
| TGGCGACAAGATCAATGAAG+GGG | + | chr5.1:14598925-14598944 | MS.gene86568:CDS | 45.0% | |
| TTACCCTCATCACCACCATT+TGG | - | chr5.1:14597900-14597919 | None:intergenic | 45.0% | |
| ! | ATCCCAAATGGTGGTGATGA+GGG | + | chr5.1:14597894-14597913 | MS.gene86568:CDS | 45.0% |
| AGATCGATCCAATCAACCGC+AGG | + | chr5.1:14598986-14599005 | MS.gene86568:CDS | 50.0% | |
| ATGTTGGGGATCCTGATGGA+GGG | - | chr5.1:14598046-14598065 | None:intergenic | 50.0% | |
| CAAGTGAAAGACCCTCCATC+AGG | + | chr5.1:14598032-14598051 | MS.gene86568:CDS | 50.0% | |
| CCACATGGAAAGCTGCGTTT+GGG | + | chr5.1:14598090-14598109 | MS.gene86568:CDS | 50.0% | |
| CTGATGGAGGGTCTTTCACT+TGG | - | chr5.1:14598034-14598053 | None:intergenic | 50.0% | |
| GATAACAGATGAACCGTCGG+CGG | - | chr5.1:14597964-14597983 | None:intergenic | 50.0% | |
| GATCGATCCAATCAACCGCA+GGG | + | chr5.1:14598987-14599006 | MS.gene86568:CDS | 50.0% | |
| GATGAGGGTAACGAAGACGA+TGG | + | chr5.1:14597909-14597928 | MS.gene86568:CDS | 50.0% | |
| GCAAACTCCCTCTTGCATTC+TGG | - | chr5.1:14598071-14598090 | None:intergenic | 50.0% | |
| TCCTCAGTGTTTGTCACAGC+GGG | - | chr5.1:14597810-14597829 | None:intergenic | 50.0% | |
| TGAGGGTAACGAAGACGATG+GGG | + | chr5.1:14597911-14597930 | MS.gene86568:CDS | 50.0% | |
| TGGCTGATCATGTTCAGCCA+AGG | - | chr5.1:14597787-14597806 | None:intergenic | 50.0% | |
| TTGGGCTTGACTCATTGGCA+GGG | - | chr5.1:14597731-14597750 | None:intergenic | 50.0% | |
| TTTGGGCTTGACTCATTGGC+AGG | - | chr5.1:14597732-14597751 | None:intergenic | 50.0% | |
| ! | AACCTCTCTGAAAACACCGG+AGG | + | chr5.1:14597833-14597852 | MS.gene86568:CDS | 50.0% |
| ! | ACGAAGACGATGGGGCTTTT+AGG | + | chr5.1:14597919-14597938 | MS.gene86568:CDS | 50.0% |
| ! | GATCCCAAATGGTGGTGATG+AGG | + | chr5.1:14597893-14597912 | MS.gene86568:CDS | 50.0% |
| ! | GCAACGGTGCTAAAAGTTGG+TGG | - | chr5.1:14598161-14598180 | None:intergenic | 50.0% |
| ! | GGTGCAACGGTGCTAAAAGT+TGG | - | chr5.1:14598164-14598183 | None:intergenic | 50.0% |
| ! | TCATCATCCTCTTCTGGAGG+TGG | - | chr5.1:14599136-14599155 | None:intergenic | 50.0% |
| ! | TTCCTCCGGTGTTTTCAGAG+AGG | - | chr5.1:14597838-14597857 | None:intergenic | 50.0% |
| !! | ACGGTGCTAAAAGTTGGTGG+AGG | - | chr5.1:14598158-14598177 | None:intergenic | 50.0% |
| !! | CGGTGCTAAAAGTTGGTGGA+GGG | - | chr5.1:14598157-14598176 | None:intergenic | 50.0% |
| !! | TGGCTGGTGTGGTGTTGTTT+GGG | - | chr5.1:14597749-14597768 | None:intergenic | 50.0% |
| ACCCGCTGTGACAAACACTG+AGG | + | chr5.1:14597806-14597825 | MS.gene86568:CDS | 55.0% | |
| AGATGAACCGTCGGCGGTTA+GGG | - | chr5.1:14597958-14597977 | None:intergenic | 55.0% | |
| AGCATCCAGAGCGTGCTCAT+CGG | + | chr5.1:14598123-14598142 | MS.gene86568:CDS | 55.0% | |
| ATGACCACTACCACCAGCAG+AGG | - | chr5.1:14599014-14599033 | None:intergenic | 55.0% | |
| CATCGTCAGTTAGTTCGGCC+AGG | - | chr5.1:14597863-14597882 | None:intergenic | 55.0% | |
| CATGTTGGGGATCCTGATGG+AGG | - | chr5.1:14598047-14598066 | None:intergenic | 55.0% | |
| CCCAAACGCAGCTTTCCATG+TGG | - | chr5.1:14598093-14598112 | None:intergenic | 55.0% | |
| GAAAACACCGGAGGAAGTCC+TGG | + | chr5.1:14597842-14597861 | MS.gene86568:CDS | 55.0% | |
| GCAAGAGGGAGTTTGCCACA+TGG | + | chr5.1:14598075-14598094 | MS.gene86568:CDS | 55.0% | |
| GCCACATGGAAAGCTGCGTT+TGG | + | chr5.1:14598089-14598108 | MS.gene86568:CDS | 55.0% | |
| GGACATGTTGGGGATCCTGA+TGG | - | chr5.1:14598050-14598069 | None:intergenic | 55.0% | |
| GTTCAGCCAAGGTGCGTTGA+GGG | - | chr5.1:14597776-14597795 | None:intergenic | 55.0% | |
| TCAGTGTTTGTCACAGCGGG+TGG | - | chr5.1:14597807-14597826 | None:intergenic | 55.0% | |
| TCTTCATTCGCAGCCTGTGC+AGG | - | chr5.1:14599079-14599098 | None:intergenic | 55.0% | |
| TGTTCAGCCAAGGTGCGTTG+AGG | - | chr5.1:14597777-14597796 | None:intergenic | 55.0% | |
| TTCAGCCAAGGTGCGTTGAG+GGG | - | chr5.1:14597775-14597794 | None:intergenic | 55.0% | |
| !! | GTGGCTGGTGTGGTGTTGTT+TGG | - | chr5.1:14597750-14597769 | None:intergenic | 55.0% |
| !!! | CGATGGGGCTTTTAGGACGA+TGG | + | chr5.1:14597926-14597945 | MS.gene86568:CDS | 55.0% |
| AGTTCGGCCAGGACTTCCTC+CGG | - | chr5.1:14597852-14597871 | None:intergenic | 60.0% | |
| ATCCAGAGCGTGCTCATCGG+GGG | + | chr5.1:14598126-14598145 | MS.gene86568:CDS | 60.0% | |
| CAAGGTGCGTTGAGGGGAAG+TGG | - | chr5.1:14597769-14597788 | None:intergenic | 60.0% | |
| CACTTCCCCTCAACGCACCT+TGG | + | chr5.1:14597767-14597786 | MS.gene86568:CDS | 60.0% | |
| CAGAGGACCCTGCGGTTGAT+TGG | - | chr5.1:14598997-14599016 | None:intergenic | 60.0% | |
| CAGATGAACCGTCGGCGGTT+AGG | - | chr5.1:14597959-14597978 | None:intergenic | 60.0% | |
| CATCCAGAGCGTGCTCATCG+GGG | + | chr5.1:14598125-14598144 | MS.gene86568:CDS | 60.0% | |
| CGAGTTGCCACCTCCAGAAG+AGG | + | chr5.1:14599126-14599145 | MS.gene86568:CDS | 60.0% | |
| CTCAGCAGGAACGGGTGCAA+CGG | - | chr5.1:14598177-14598196 | None:intergenic | 60.0% | |
| GCATCCAGAGCGTGCTCATC+GGG | + | chr5.1:14598124-14598143 | MS.gene86568:CDS | 60.0% | |
| GTTATCGCCCTAACCGCCGA+CGG | + | chr5.1:14597948-14597967 | MS.gene86568:CDS | 60.0% | |
| GTTGCACCCGTTCCTGCTGA+GGG | + | chr5.1:14598176-14598195 | MS.gene86568:CDS | 60.0% | |
| TTGAGGGGAAGTGGCTGGTG+TGG | - | chr5.1:14597760-14597779 | None:intergenic | 60.0% | |
| AACCCCCGATGAGCACGCTC+TGG | - | chr5.1:14598131-14598150 | None:intergenic | 65.0% | |
| ACCACCAGCAGAGGACCCTG+CGG | - | chr5.1:14599005-14599024 | None:intergenic | 65.0% | |
| ACCTGCACCAGCACCTGCAC+AGG | + | chr5.1:14599063-14599082 | MS.gene86568:CDS | 65.0% | |
| CGTTGCACCCGTTCCTGCTG+AGG | + | chr5.1:14598175-14598194 | MS.gene86568:CDS | 65.0% | |
| GGGTCCTCTGCTGGTGGTAG+TGG | + | chr5.1:14599007-14599026 | MS.gene86568:CDS | 65.0% | |
| GTGCGTTGAGGGGAAGTGGC+TGG | - | chr5.1:14597765-14597784 | None:intergenic | 65.0% | |
| TCAACCGCAGGGTCCTCTGC+TGG | + | chr5.1:14598998-14599017 | MS.gene86568:CDS | 65.0% | |
| TTCGCAGCCTGTGCAGGTGC+TGG | - | chr5.1:14599073-14599092 | None:intergenic | 65.0% | |
| !! | GTGCAGGTGCAGGTGCTGCT+TGG | - | chr5.1:14599051-14599070 | None:intergenic | 65.0% |
| ACCGCAGGGTCCTCTGCTGG+TGG | + | chr5.1:14599001-14599020 | MS.gene86568:CDS | 70.0% | |
| !! | GCAGGTGCTGGTGCAGGTGC+AGG | - | chr5.1:14599061-14599080 | None:intergenic | 70.0% |
| !! | GCCTGTGCAGGTGCTGGTGC+AGG | - | chr5.1:14599067-14599086 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 14597717 | 14599171 | 14597717 | ID=MS.gene86568 |
| chr5.1 | mRNA | 14597717 | 14599171 | 14597717 | ID=MS.gene86568.t1;Parent=MS.gene86568 |
| chr5.1 | exon | 14597717 | 14598197 | 14597717 | ID=MS.gene86568.t1.exon1;Parent=MS.gene86568.t1 |
| chr5.1 | CDS | 14597717 | 14598197 | 14597717 | ID=cds.MS.gene86568.t1;Parent=MS.gene86568.t1 |
| chr5.1 | exon | 14598915 | 14599171 | 14598915 | ID=MS.gene86568.t1.exon2;Parent=MS.gene86568.t1 |
| chr5.1 | CDS | 14598915 | 14599171 | 14598915 | ID=cds.MS.gene86568.t1;Parent=MS.gene86568.t1 |
| Gene Sequence |
| Protein sequence |
