AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene86671

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86671.t1 MTR_7g427710 88.720 656 53 5 15 663 1 642 0.0 1182
MS.gene86671.t1 MTR_6g477820 64.384 730 188 12 1 662 1 726 0.0 882
MS.gene86671.t1 MTR_7g427690 80.353 453 50 7 140 583 26 448 0.0 717
MS.gene86671.t1 MTR_8g432540 45.211 710 306 16 25 661 109 808 0.0 572
MS.gene86671.t1 MTR_7g076080 44.699 698 307 16 31 661 91 776 0.0 558
MS.gene86671.t1 MTR_2g088470 44.978 687 305 13 29 660 65 733 0.0 547
MS.gene86671.t1 MTR_4g047800 43.262 705 333 14 11 660 38 730 0.0 534
MS.gene86671.t1 MTR_5g029320 42.351 706 336 14 20 659 78 778 2.34e-178 527
MS.gene86671.t1 MTR_1g101280 42.068 706 325 18 29 659 54 750 1.47e-175 518
MS.gene86671.t1 MTR_7g427700 84.429 289 29 3 15 297 1 279 6.36e-170 493
MS.gene86671.t1 MTR_7g427700 90.385 156 15 0 508 663 280 435 3.62e-90 287
MS.gene86671.t1 MTR_2g101720 37.311 662 365 12 36 661 144 791 2.10e-155 468
MS.gene86671.t1 MTR_0198s0030 38.385 706 339 16 36 659 60 751 5.38e-144 437
MS.gene86671.t1 MTR_2g030570 37.698 695 361 14 21 659 17 695 1.66e-138 421
MS.gene86671.t1 MTR_2g030600 37.243 682 358 13 31 659 24 688 3.90e-132 405
MS.gene86671.t1 MTR_5g005600 37.283 692 337 21 38 659 52 716 2.50e-130 401
MS.gene86671.t1 MTR_2g030660 36.350 663 369 18 25 659 10 647 7.02e-119 369
MS.gene86671.t1 MTR_0653s0020 85.340 191 19 2 360 549 1 183 3.18e-108 325
MS.gene86671.t1 MTR_0653s0010 91.525 118 10 0 546 663 1 118 3.92e-67 216
MS.gene86671.t1 MTR_2g083330 29.354 511 300 14 176 660 51 526 3.14e-59 208
MS.gene86671.t1 MTR_7g027605 94.505 91 5 0 267 357 1 91 1.38e-57 189
MS.gene86671.t1 MTR_2g083350 31.778 450 255 14 238 660 108 532 1.95e-56 201
MS.gene86671.t1 MTR_7g027265 62.500 136 40 1 15 139 1 136 1.35e-48 167
MS.gene86671.t1 MTR_7g427670 88.235 85 10 0 85 169 32 116 1.18e-42 150
MS.gene86671.t1 MTR_5g046040 48.780 164 70 3 8 160 14 174 4.37e-39 148
MS.gene86671.t1 MTR_7g427720 90.789 76 7 0 588 663 24 99 1.17e-38 138
MS.gene86671.t1 MTR_2g030690 30.272 294 170 8 384 659 1 277 3.00e-28 115
MS.gene86671.t1 MTR_7g027245 70.130 77 15 1 187 263 19 87 7.19e-27 105
MS.gene86671.t1 MTR_2g451350 43.284 134 74 2 192 324 1 133 1.18e-25 103
MS.gene86671.t1 MTR_3g109800 22.142 691 367 29 37 629 23 640 2.75e-20 95.9
MS.gene86671.t1 MTR_3g109800 22.142 691 367 29 37 629 23 640 4.06e-20 95.5
MS.gene86671.t1 MTR_3g109800 22.142 691 367 29 37 629 23 640 6.38e-20 95.1
MS.gene86671.t1 MTR_2g030130 22.701 511 300 17 37 503 16 475 1.97e-19 93.6
MS.gene86671.t1 MTR_4g058970 21.221 721 397 27 1 629 7 648 1.74e-18 90.5
MS.gene86671.t1 MTR_8g013980 22.365 702 360 33 37 633 18 639 1.09e-17 87.8
MS.gene86671.t1 MTR_6g027290 33.333 129 74 1 42 158 36 164 1.95e-17 80.9
MS.gene86671.t1 MTR_6g086740 75.000 48 9 1 618 662 3 50 3.25e-14 67.8
MS.gene86671.t1 MTR_2g030720 33.613 119 69 3 37 152 24 135 5.50e-14 70.5
MS.gene86671.t1 MTR_2g094520 23.770 366 202 14 37 376 26 340 3.03e-13 73.6
MS.gene86671.t1 MTR_2g030700 32.143 140 75 5 37 164 24 155 3.84e-12 65.1
MS.gene86671.t1 MTR_2g030680 31.429 140 76 5 37 164 24 155 3.24e-11 62.4
MS.gene86671.t1 MTR_1g105420 29.000 200 89 8 86 245 1 187 4.60e-11 63.5
MS.gene86671.t1 MTR_2g451350 48.333 60 31 0 265 324 35 94 7.44e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86671.t1 AT1G73360 52.865 698 252 14 30 662 31 716 0.0 671
MS.gene86671.t1 AT1G17920 53.052 688 237 18 34 662 24 684 0.0 649
MS.gene86671.t1 AT1G17920 53.052 688 237 18 34 662 24 684 0.0 649
MS.gene86671.t1 AT4G04890 45.852 687 305 17 31 661 62 737 0.0 568
MS.gene86671.t1 AT4G04890 45.852 687 305 17 31 661 62 737 0.0 568
MS.gene86671.t1 AT4G21750 44.648 710 302 16 31 661 62 759 0.0 549
MS.gene86671.t1 AT4G21750 44.648 710 302 16 31 661 62 759 0.0 549
MS.gene86671.t1 AT4G21750 44.648 710 302 16 31 661 62 759 0.0 549
MS.gene86671.t1 AT4G21750 44.648 710 302 16 31 661 62 759 0.0 549
MS.gene86671.t1 AT1G05230 43.228 694 315 15 20 661 50 716 0.0 537
MS.gene86671.t1 AT1G05230 43.103 696 315 16 20 661 50 718 0.0 531
MS.gene86671.t1 AT1G05230 43.103 696 315 16 20 661 50 718 0.0 531
MS.gene86671.t1 AT1G05230 43.103 696 315 16 20 661 50 718 0.0 531
MS.gene86671.t1 AT1G05230 43.103 696 315 16 20 661 50 718 0.0 531
MS.gene86671.t1 AT1G05230 43.103 696 315 16 20 661 50 718 0.0 531
MS.gene86671.t1 AT1G05230 43.103 696 315 16 20 661 50 718 0.0 531
MS.gene86671.t1 AT1G05230 43.103 696 315 16 20 661 50 718 0.0 531
MS.gene86671.t1 AT1G05230 43.103 696 315 16 20 661 50 718 0.0 531
MS.gene86671.t1 AT1G05230 43.103 696 315 16 20 661 50 718 0.0 531
MS.gene86671.t1 AT1G05230 43.103 696 315 16 20 661 50 718 0.0 531
MS.gene86671.t1 AT3G61150 41.713 712 332 16 24 661 103 805 1.78e-177 525
MS.gene86671.t1 AT4G00730 43.650 685 314 14 31 661 134 800 8.18e-177 523
MS.gene86671.t1 AT5G52170 40.552 688 339 16 13 662 31 686 2.09e-155 464
MS.gene86671.t1 AT5G52170 40.784 689 331 18 13 662 31 681 2.26e-155 464
MS.gene86671.t1 AT5G52170 40.784 689 331 18 13 662 31 681 2.26e-155 464
MS.gene86671.t1 AT1G05230 42.451 563 268 11 20 537 50 601 2.29e-146 439
MS.gene86671.t1 AT3G03260 38.182 715 341 16 20 662 12 697 6.65e-145 438
MS.gene86671.t1 AT5G46880 39.385 716 327 20 31 659 111 806 6.58e-143 437
MS.gene86671.t1 AT5G46880 39.385 716 327 20 31 659 111 806 6.58e-143 437
MS.gene86671.t1 AT5G46880 39.385 716 327 20 31 659 111 806 6.58e-143 437
MS.gene86671.t1 AT1G79840 37.519 661 370 16 27 659 39 684 1.16e-141 429
MS.gene86671.t1 AT1G79840 37.519 661 370 16 27 659 39 684 1.16e-141 429
MS.gene86671.t1 AT1G79840 37.519 661 370 16 27 659 97 742 5.32e-141 429
MS.gene86671.t1 AT1G79840 37.519 661 370 16 27 659 126 771 1.64e-140 429
MS.gene86671.t1 AT4G17710 40.402 646 338 18 31 659 88 703 9.18e-136 415
MS.gene86671.t1 AT5G17320 36.639 726 354 17 20 661 14 717 1.14e-128 397
MS.gene86671.t1 AT2G32370 36.011 697 364 18 18 661 55 722 6.30e-128 395
MS.gene86671.t1 AT1G79840 38.185 529 302 11 27 535 97 620 5.31e-120 371
MS.gene86671.t1 AT1G34650 35.938 704 352 13 38 661 23 707 6.52e-115 360
MS.gene86671.t1 AT4G00730 44.289 429 195 8 31 422 134 555 2.13e-112 350
MS.gene86671.t1 AT3G03260 38.920 537 269 11 20 507 12 538 6.59e-111 345
MS.gene86671.t1 AT4G25530 33.976 674 381 16 26 660 35 683 4.35e-104 332
MS.gene86671.t1 AT1G79840 41.500 400 218 10 27 415 97 491 1.73e-94 301
MS.gene86671.t1 AT5G07260 26.641 518 316 18 97 588 10 489 2.95e-41 158
MS.gene86671.t1 AT5G07260 26.550 516 314 18 97 588 10 484 3.85e-41 157
MS.gene86671.t1 AT5G60690 23.764 526 300 21 17 503 8 471 2.08e-19 93.6
MS.gene86671.t1 AT4G32880 21.208 712 383 30 21 629 2 638 5.04e-19 92.4
MS.gene86671.t1 AT1G52150 21.538 715 408 31 37 660 20 672 6.43e-17 85.5
MS.gene86671.t1 AT1G52150 21.538 715 408 31 37 660 20 672 7.60e-17 85.1
MS.gene86671.t1 AT1G52150 21.508 716 408 31 37 660 20 673 8.08e-17 85.1
MS.gene86671.t1 AT1G30490 21.231 471 306 14 14 464 1 426 7.34e-16 82.0
MS.gene86671.t1 AT4G26920 26.829 246 154 11 192 429 72 299 8.97e-12 68.2

Find 119 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTTGGTTGAAATGTTTA+TGG 0.116059 7.4:-74139704 MS.gene86671:CDS
CCAATTGTTAATGGACTTAT+TGG 0.149364 7.4:-74136988 MS.gene86671:CDS
TGGAAACTAATGAGCCTTTA+TGG 0.155056 7.4:-74139870 MS.gene86671:CDS
AACAGTTGCATTTCAAATTA+TGG 0.161793 7.4:-74137043 MS.gene86671:CDS
TAACTGCATTTCCGTGTTTA+AGG 0.164073 7.4:-74137882 MS.gene86671:intron
GAGTCTGTTCCAATTGTTAA+TGG 0.231563 7.4:-74136997 MS.gene86671:CDS
CTTGCTTATCTTATGGATTC+AGG 0.246109 7.4:-74138861 MS.gene86671:CDS
ATCCTACTAAGATCAAATTT+TGG 0.254513 7.4:-74140960 MS.gene86671:CDS
AGAAGCTTCGATGCGAATAT+TGG 0.259862 7.4:+74139759 None:intergenic
CATTCTCTTCTATGAGTATA+CGG 0.271618 7.4:+74140771 None:intergenic
AACAATGATCCTCCAATGTT+TGG 0.280132 7.4:+74137066 None:intergenic
TGTTTCTTCTAAGAGACTTA+TGG 0.294415 7.4:-74141654 MS.gene86671:CDS
TGAAAGGCTTGCTTATCTTA+TGG 0.295191 7.4:-74138868 MS.gene86671:CDS
ATTTGCCATTAGGCATGTTT+TGG 0.302182 7.4:+74139134 None:intergenic
CCTAGGGAACATTGTTTCAT+AGG 0.302491 7.4:+74139804 None:intergenic
ACCTGCTGGTCTCTCTAATA+AGG 0.317654 7.4:-74139950 MS.gene86671:CDS
AGGAAGTAAAATTCTCTAAT+AGG 0.322633 7.4:+74139277 None:intergenic
CGAGGCCTTCGTCTTCCTTC+CGG 0.332723 7.4:-74139166 MS.gene86671:CDS
ATTACCTTGGATTTGCCATT+AGG 0.342697 7.4:+74139124 None:intergenic
ATCAATAGTGGAGTTGCATT+TGG 0.344218 7.4:-74138927 MS.gene86671:CDS
ACTCTTACGCTTCAAGCCTT+TGG 0.345673 7.4:+74141549 None:intergenic
CTTATGGATTCAGGCCATTC+CGG 0.351380 7.4:-74138852 MS.gene86671:CDS
TTTGCCATTGTCACAATAGT+TGG 0.352656 7.4:+74139556 None:intergenic
CAAGGAGGTAATAGTGATAA+TGG 0.367284 7.4:-74137114 MS.gene86671:CDS
GAAGCAAAATGTTTGTTATG+AGG 0.381185 7.4:+74139196 None:intergenic
ACAATGATCCTCCAATGTTT+GGG 0.386821 7.4:+74137067 None:intergenic
AAGAAATTGAACACAGTTTG+TGG 0.389284 7.4:+74138415 None:intergenic
CCAATAAGTCCATTAACAAT+TGG 0.391204 7.4:+74136988 None:intergenic
ATCGAAGCTTCTAGAAATTC+TGG 0.400503 7.4:-74139748 MS.gene86671:CDS
GAAGCTTCGATGCGAATATT+GGG 0.405652 7.4:+74139760 None:intergenic
GCAGGTTGGTAAGGAACATT+TGG 0.407059 7.4:+74139967 None:intergenic
CTCATTATTGATGAATCAAC+AGG 0.412591 7.4:+74137219 None:intergenic
TCTAAGTGGTTCTTTGCAAT+TGG 0.413268 7.4:-74139497 MS.gene86671:intron
TTTCTTCTGATACTCATAAG+AGG 0.424848 7.4:-74141610 MS.gene86671:CDS
GGTTTCGCAATTACTTCTGA+TGG 0.425225 7.4:-74137159 MS.gene86671:CDS
ATGCATCAGCTAGTCATAGA+TGG 0.431673 7.4:-74138534 MS.gene86671:CDS
GCGCTTAGCACCTCACCATT+AGG 0.435182 7.4:+74138466 None:intergenic
ATCATGGTCCTCTTTCCATC+AGG 0.446341 7.4:+74138601 None:intergenic
GGCAATGTTGATGAACTTCC+TGG 0.447876 7.4:+74139988 None:intergenic
TACATTCAATTACTACCATC+AGG 0.449951 7.4:-74137180 MS.gene86671:CDS
GAAAGCTGTGTGGACTCATC+AGG 0.455962 7.4:-74137261 MS.gene86671:CDS
GAGAGACCAGCAGGTTGGTA+AGG 0.458220 7.4:+74139958 None:intergenic
CCTTTGTGTTAGCTTCATCA+TGG 0.462487 7.4:+74138585 None:intergenic
GGAACAGACTCCATGTTAGA+TGG 0.463514 7.4:+74137009 None:intergenic
CAAAATGATAATAATATTCA+AGG 0.464579 7.4:-74137132 MS.gene86671:CDS
ACATTGTTTCATAGGTTTCA+AGG 0.467987 7.4:+74139812 None:intergenic
AACCAAAATTTGATCTTAGT+AGG 0.469554 7.4:+74140958 None:intergenic
TTCATCCAAAACATGCCTAA+TGG 0.470312 7.4:-74139139 MS.gene86671:CDS
AACACGGAAATGCAGTTACC+AGG 0.472364 7.4:+74137887 None:intergenic
TACTGTAAACAATTTGAGAA+AGG 0.478598 7.4:-74139250 MS.gene86671:CDS
TAAGCGCATCTACTACCATT+TGG 0.483607 7.4:-74138450 MS.gene86671:CDS
ATAGCAAATGTTTCGCGCCC+TGG 0.492909 7.4:-74137905 MS.gene86671:CDS
CTCTTGAACATCATTACCAT+TGG 0.494619 7.4:+74137937 None:intergenic
AGCATTGCAGCTGGATACAC+TGG 0.498024 7.4:-74140033 MS.gene86671:CDS
AACACAGTTTGTGGAGGGAG+AGG 0.500511 7.4:+74138424 None:intergenic
TCCTTATTAGAGAGACCAGC+AGG 0.504163 7.4:+74139949 None:intergenic
GTAAACAATTTGAGAAAGGA+TGG 0.505133 7.4:-74139246 MS.gene86671:CDS
CCTATGAAACAATGTTCCCT+AGG 0.505913 7.4:-74139804 MS.gene86671:CDS
TTGATGAACTTCCTGGTAGA+AGG 0.508996 7.4:+74139995 None:intergenic
TTTAACTGATTATTAACCCT+AGG 0.515861 7.4:+74139787 None:intergenic
TGGATAAAATCAAACACTGA+TGG 0.528970 7.4:-74139850 MS.gene86671:CDS
TAGTCGAATGTACTTTCCAA+TGG 0.529852 7.4:-74137953 MS.gene86671:CDS
TGTCATGAATGCCTCGACTT+TGG 0.538376 7.4:-74139719 MS.gene86671:CDS
TTAACTGATTATTAACCCTA+GGG 0.546265 7.4:+74139788 None:intergenic
TTTGATCTTAGTAGGATCCA+TGG 0.546590 7.4:+74140966 None:intergenic
GTGAGGAAGAGTCAGCCTAA+TGG 0.548840 7.4:-74138481 MS.gene86671:CDS
TCAGTGATTTCATCACCTGA+TGG 0.552751 7.4:-74138616 MS.gene86671:intron
AGTTATATCTTCTCGAACGA+AGG 0.555948 7.4:-74139524 MS.gene86671:CDS
CACTTCAAAGAATGTGTGAA+AGG 0.558355 7.4:-74138884 MS.gene86671:CDS
AATGTTCCTTACCAACCTGC+TGG 0.559665 7.4:-74139964 MS.gene86671:CDS
AGAGTATCTAGCATTGCAGC+TGG 0.559790 7.4:-74140042 MS.gene86671:CDS
GCTACCTCCTTCGATATGAC+CGG 0.559982 7.4:+74138833 None:intergenic
CTCATTCAAAGTTGATAATG+TGG 0.562410 7.4:+74138510 None:intergenic
ATATCTTCTCGAACGAAGGA+TGG 0.565148 7.4:-74139520 MS.gene86671:CDS
ATTTCCAACTATTGTGACAA+TGG 0.566424 7.4:-74139560 MS.gene86671:CDS
AGCTCAAACCCAAACATTGG+AGG 0.568422 7.4:-74137075 MS.gene86671:CDS
GAAGTAATTGCGAAACCTGA+TGG 0.568742 7.4:+74137165 None:intergenic
GATGAAGCTAACACAAAGGA+TGG 0.568765 7.4:-74138581 MS.gene86671:CDS
GAATAGAAGGACTCAGATGA+AGG 0.569088 7.4:-74140932 MS.gene86671:intron
CAATGGTAATGATGTTCAAG+AGG 0.572359 7.4:-74137936 MS.gene86671:CDS
ACAAGCTCAAACCCAAACAT+TGG 0.579839 7.4:-74137078 MS.gene86671:CDS
GGCCATTCCGGTCATATCGA+AGG 0.579973 7.4:-74138840 MS.gene86671:CDS
CTCCTTCGATATGACCGGAA+TGG 0.582084 7.4:+74138838 None:intergenic
GATCTGAGAATATAGCTATG+AGG 0.582816 7.4:-74140739 MS.gene86671:CDS
TCACTGTCACACCTTCTACC+AGG 0.583984 7.4:-74140006 MS.gene86671:CDS
TTTCATCACCTGATGGAAAG+AGG 0.584897 7.4:-74138609 MS.gene86671:CDS
ACAAAGGTTGCAGTTAGGCA+AGG 0.593066 7.4:-74140995 MS.gene86671:CDS
CTATGAAACAATGTTCCCTA+GGG 0.595217 7.4:-74139803 MS.gene86671:CDS
TGGAGGGAGAGGTAGCCAAA+TGG 0.596344 7.4:+74138435 None:intergenic
CATGCCTAATGGCAAATCCA+AGG 0.600402 7.4:-74139128 MS.gene86671:intron
ATACCAATAAGGAACTACAT+AGG 0.600755 7.4:+74136928 None:intergenic
GGTAGTAATTGAATGTATGA+AGG 0.601567 7.4:+74137186 None:intergenic
TACTTGGATTGAACATGTTG+AGG 0.602638 7.4:-74138991 MS.gene86671:CDS
CGAACGAAGGATGGTCTAAG+TGG 0.602970 7.4:-74139511 MS.gene86671:CDS
CAAATTGTTTACAGTAACGT+AGG 0.603339 7.4:+74139257 None:intergenic
TAAACAATTTGAGAAAGGAT+GGG 0.603561 7.4:-74139245 MS.gene86671:CDS
AATTGAACACAGTTTGTGGA+GGG 0.607093 7.4:+74138419 None:intergenic
AATTCTCTAATAGGAACAAG+TGG 0.613864 7.4:+74139286 None:intergenic
GTTAGGCAAGGAATTAGCCA+TGG 0.615783 7.4:-74140983 MS.gene86671:CDS
GGATCTGATCAGCAGTGTGA+CGG 0.618661 7.4:+74141570 None:intergenic
TATTAGAGAGACCAGCAGGT+TGG 0.619511 7.4:+74139953 None:intergenic
AAATTGAACACAGTTTGTGG+AGG 0.620718 7.4:+74138418 None:intergenic
CTTATGGAGCATCACAGTGA+AGG 0.621938 7.4:-74141638 MS.gene86671:CDS
CTTATGGAGCATCACAGTGA+AGG 0.621938 7.4:-74141680 MS.gene86671:CDS
GAGTAGTTTACCATCTAACA+TGG 0.623707 7.4:-74137019 MS.gene86671:CDS
AAATGCTCGACTCAAAGAAG+AGG 0.627561 7.4:-74140660 MS.gene86671:intron
ACACTGCTGATCAGATCCAA+AGG 0.630792 7.4:-74141565 MS.gene86671:CDS
GGACTCATCAGGTTCACTTG+TGG 0.637914 7.4:-74137250 MS.gene86671:CDS
AAACATTTCAACCAAAGTCG+AGG 0.640163 7.4:+74139708 None:intergenic
GAAGAGTCAGCCTAATGGTG+AGG 0.665543 7.4:-74138476 MS.gene86671:CDS
ACACGGAAATGCAGTTACCA+GGG 0.667911 7.4:+74137888 None:intergenic
CATTCCGGTCATATCGAAGG+AGG 0.675235 7.4:-74138837 MS.gene86671:intron
AATGATAATAATATTCAAGG+AGG 0.684472 7.4:-74137129 MS.gene86671:CDS
TGATTCATCAATAATGAGCG+AGG 0.688237 7.4:-74137214 MS.gene86671:CDS
AGAATGTCTTACCTTAAACA+CGG 0.688574 7.4:+74137871 None:intergenic
AGCAACCGGAAGGAAGACGA+AGG 0.713060 7.4:+74139161 None:intergenic
CCATGATGAAGCTAACACAA+AGG 0.718830 7.4:-74138585 MS.gene86671:CDS
CTTTGAATGAGATTATCGTG+AGG 0.722580 7.4:-74138498 MS.gene86671:CDS
GATACTACAAGAAAGCTGTG+TGG 0.776411 7.4:-74137271 MS.gene86671:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAATAAATAAATAA+AGG + chr7.4:74137131-74137150 None:intergenic 0.0%
!! TAAATAAATAAATAAATAAA+GGG + chr7.4:74137130-74137149 None:intergenic 0.0%
!! AAATTCAAAAAATATTTGTA+TGG - chr7.4:74138260-74138279 MS.gene86671:intron 10.0%
!!! GTGTTTTTTAAATTATATTA+GGG - chr7.4:74137717-74137736 MS.gene86671:intron 10.0%
!!! TCTTGTATATTTTAATTTAT+AGG - chr7.4:74139604-74139623 MS.gene86671:intron 10.0%
!!! TGTGTTTTTTAAATTATATT+AGG - chr7.4:74137716-74137735 MS.gene86671:intron 10.0%
!! ATAAAAAAACAAATAAATGG+AGG + chr7.4:74140775-74140794 None:intergenic 15.0%
!! ATAATAATAATAATAGAGTC+TGG + chr7.4:74140284-74140303 None:intergenic 15.0%
!! CAAAATGATAATAATATTCA+AGG - chr7.4:74141487-74141506 MS.gene86671:intron 15.0%
!! TATAAAAATGTTATCAATAG+TGG - chr7.4:74139680-74139699 MS.gene86671:intron 15.0%
!!! AGATTGTGAATTAATTTTAT+AGG - chr7.4:74138295-74138314 MS.gene86671:intron 15.0%
!!! ATTTTAATTTATAGGTTACT+TGG - chr7.4:74139612-74139631 MS.gene86671:intron 15.0%
!!! ATTTTAGATTTATTTTTGTG+TGG - chr7.4:74139188-74139207 MS.gene86671:CDS 15.0%
!!! CAAAAGAATTTTAAAAAGTA+AGG + chr7.4:74138445-74138464 None:intergenic 15.0%
!!! CAATAATATTTTTAGATGTA+TGG - chr7.4:74139291-74139310 MS.gene86671:CDS 15.0%
!!! TTAAACTTAGTTTAAAATTG+CGG - chr7.4:74138332-74138351 MS.gene86671:intron 15.0%
!!! TTTAAAATTCTTTTGTAATG+TGG - chr7.4:74138450-74138469 MS.gene86671:CDS 15.0%
!!! TTTTTTTTTTTGGTACAAAA+GGG + chr7.4:74138178-74138197 None:intergenic 15.0%
!!! TTTTTTTTTTTTGGTACAAA+AGG + chr7.4:74138179-74138198 None:intergenic 15.0%
!! AATGATAATAATATTCAAGG+AGG - chr7.4:74141490-74141509 MS.gene86671:intron 20.0%
!! ATAGATATAATACAATAAGC+AGG + chr7.4:74140533-74140552 None:intergenic 20.0%
!! ATTTATGTGGCAAATTAAAA+TGG - chr7.4:74138528-74138547 MS.gene86671:CDS 20.0%
!! CAATTAAAAGTTAATTACCT+TGG + chr7.4:74139511-74139530 None:intergenic 20.0%
!! TAGATATAATACAATAAGCA+GGG + chr7.4:74140532-74140551 None:intergenic 20.0%
!! TATTTATTTATACGACACTT+AGG - chr7.4:74137156-74137175 MS.gene86671:CDS 20.0%
!! TCTCTATAAAAGCAAAATAA+GGG - chr7.4:74138234-74138253 MS.gene86671:intron 20.0%
!! TTTGTTAATCTGCAAATATA+GGG - chr7.4:74141298-74141317 MS.gene86671:intron 20.0%
!!! ACGAAAATTTTCTGTTTTTA+TGG + chr7.4:74141251-74141270 None:intergenic 20.0%
!!! ACTATAAAATCTCATTTTGT+TGG - chr7.4:74139534-74139553 MS.gene86671:CDS 20.0%
!!! TAAAAACAGAAAATTTTCGT+CGG - chr7.4:74141251-74141270 MS.gene86671:intron 20.0%
!!! TAGTTGTTTCTATTGAAAAT+GGG + chr7.4:74140951-74140970 None:intergenic 20.0%
!!! TCACAATATAAATGTTTTAG+AGG - chr7.4:74139842-74139861 MS.gene86671:CDS 20.0%
!!! TGTTGTATTTTGTATTTATG+TGG - chr7.4:74138515-74138534 MS.gene86671:CDS 20.0%
!!! TTAGAAAAACTCTTTTTTGT+CGG + chr7.4:74141025-74141044 None:intergenic 20.0%
!!! TTAGTTGTTTCTATTGAAAA+TGG + chr7.4:74140952-74140971 None:intergenic 20.0%
!!! TTTTATAAAGCATATGAACT+GGG + chr7.4:74139667-74139686 None:intergenic 20.0%
!!! TTTTGTTAATCTGCAAATAT+AGG - chr7.4:74141297-74141316 MS.gene86671:intron 20.0%
!!! TTTTTATAAAGCATATGAAC+TGG + chr7.4:74139668-74139687 None:intergenic 20.0%
!!! TTTTTTTTTTGGTACAAAAG+GGG + chr7.4:74138177-74138196 None:intergenic 20.0%
! AAATACAACACATGTAAACA+TGG + chr7.4:74138505-74138524 None:intergenic 25.0%
! AACAGTTGCATTTCAAATTA+TGG - chr7.4:74141576-74141595 MS.gene86671:CDS 25.0%
! AACCAAAATTTGATCTTAGT+AGG + chr7.4:74137664-74137683 None:intergenic 25.0%
! AGGAAGTAAAATTCTCTAAT+AGG + chr7.4:74139345-74139364 None:intergenic 25.0%
! ATAATAATAATAGAGTCTGG+AGG + chr7.4:74140281-74140300 None:intergenic 25.0%
! ATCAAGTATTTAACAAACCT+GGG + chr7.4:74140250-74140269 None:intergenic 25.0%
! GTCTCTATAAAAGCAAAATA+AGG - chr7.4:74138233-74138252 MS.gene86671:intron 25.0%
! TAAACAATTTGAGAAAGGAT+GGG - chr7.4:74139374-74139393 MS.gene86671:intron 25.0%
! TAATAATAATAGAGTCTGGA+GGG + chr7.4:74140280-74140299 None:intergenic 25.0%
! TACTGTAAACAATTTGAGAA+AGG - chr7.4:74139369-74139388 MS.gene86671:intron 25.0%
! TGAAATACCTTAGAGTTAAA+AGG - chr7.4:74140608-74140627 MS.gene86671:intron 25.0%
! TTAACTGATTATTAACCCTA+GGG + chr7.4:74138834-74138853 None:intergenic 25.0%
! TTTAACTGATTATTAACCCT+AGG + chr7.4:74138835-74138854 None:intergenic 25.0%
! TTTCTATTGTGGCAAAATAT+AGG - chr7.4:74138369-74138388 MS.gene86671:intron 25.0%
!! ACATAATTCTTTTGCATTAG+TGG + chr7.4:74138008-74138027 None:intergenic 25.0%
!! ATCCTACTAAGATCAAATTT+TGG - chr7.4:74137659-74137678 MS.gene86671:intron 25.0%
!! GAGTTCACAAATTTTAAATG+TGG + chr7.4:74141208-74141227 None:intergenic 25.0%
!! GCTGCAAATAACATTTTTAA+GGG + chr7.4:74137910-74137929 None:intergenic 25.0%
!! TATATTTTGCCACAATAGAA+AGG + chr7.4:74138370-74138389 None:intergenic 25.0%
!! TATCTTTGAAAAATGTGAAG+CGG - chr7.4:74140432-74140451 MS.gene86671:intron 25.0%
!! TATTGCATGCACAATTTTAA+TGG - chr7.4:74138045-74138064 MS.gene86671:intron 25.0%
!! TGCTGCAAATAACATTTTTA+AGG + chr7.4:74137911-74137930 None:intergenic 25.0%
!!! AAGAAAACCTTTTAACTCTA+AGG + chr7.4:74140618-74140637 None:intergenic 25.0%
!!! AATTTTGGTTTCAGAATAGA+AGG - chr7.4:74137674-74137693 MS.gene86671:intron 25.0%
!!! CTATTTGTTTTTGACACTTT+TGG - chr7.4:74137358-74137377 MS.gene86671:intron 25.0%
!!! GTGTTTGATTTTATCCATAA+AGG + chr7.4:74138766-74138785 None:intergenic 25.0%
!!! TAGATAGAGAGACTTATTTT+AGG + chr7.4:74140872-74140891 None:intergenic 25.0%
AAAGAGTAAGAAGTTCTTAC+AGG + chr7.4:74138943-74138962 None:intergenic 30.0%
AAATGGTATAAGGTCCTAAA+TGG + chr7.4:74141073-74141092 None:intergenic 30.0%
AAGAAATTGAACACAGTTTG+TGG + chr7.4:74140207-74140226 None:intergenic 30.0%
AAGAGAATATTGTGCATGTA+TGG + chr7.4:74138086-74138105 None:intergenic 30.0%
AAGGAAAAATCACTCATGTT+AGG - chr7.4:74138688-74138707 MS.gene86671:intron 30.0%
AATGTTGTGTTTACGAAGAT+TGG - chr7.4:74137438-74137457 MS.gene86671:intron 30.0%
AATTCTCTAATAGGAACAAG+TGG + chr7.4:74139336-74139355 None:intergenic 30.0%
ACATTGTTTCATAGGTTTCA+AGG + chr7.4:74138810-74138829 None:intergenic 30.0%
AGAATGTCTTACCTTAAACA+CGG + chr7.4:74140751-74140770 None:intergenic 30.0%
ATGGTTTCAAATTGTAGTTG+CGG - chr7.4:74139819-74139838 MS.gene86671:CDS 30.0%
ATGTTGTGTTTACGAAGATT+GGG - chr7.4:74137439-74137458 MS.gene86671:intron 30.0%
ATTCAATGTGCAAGAGAAAT+TGG + chr7.4:74139260-74139279 None:intergenic 30.0%
ATTTCCAACTATTGTGACAA+TGG - chr7.4:74139059-74139078 MS.gene86671:intron 30.0%
CAAATTGTTTACAGTAACGT+AGG + chr7.4:74139365-74139384 None:intergenic 30.0%
CAATGTTATGATATACGGAT+GGG - chr7.4:74137183-74137202 MS.gene86671:CDS 30.0%
CATATCCTGATGAAAAACAA+AGG - chr7.4:74137608-74137627 MS.gene86671:intron 30.0%
CATATTAAGAGGTGAAATTC+TGG + chr7.4:74140476-74140495 None:intergenic 30.0%
CATTCTCTTCTATGAGTATA+CGG + chr7.4:74137851-74137870 None:intergenic 30.0%
CCAATAAGTCCATTAACAAT+TGG + chr7.4:74141634-74141653 None:intergenic 30.0%
CCTCACTTATTCATATTAAG+AGG + chr7.4:74140487-74140506 None:intergenic 30.0%
CCTCTTAATATGAATAAGTG+AGG - chr7.4:74140484-74140503 MS.gene86671:intron 30.0%
CTCATTATTGATGAATCAAC+AGG + chr7.4:74141403-74141422 None:intergenic 30.0%
GACTTTGGTTGAAATGTTTA+TGG - chr7.4:74138915-74138934 MS.gene86671:CDS 30.0%
GAGTTACTCTAAATGGTATA+AGG + chr7.4:74141083-74141102 None:intergenic 30.0%
GATCAAGTATTTAACAAACC+TGG + chr7.4:74140251-74140270 None:intergenic 30.0%
GATTTCACAATGATTCTTTG+TGG - chr7.4:74137782-74137801 MS.gene86671:intron 30.0%
GCATGCAATGTTATGATATA+CGG - chr7.4:74137178-74137197 MS.gene86671:CDS 30.0%
GCTTCTATATAGAGTTCAAA+GGG - chr7.4:74137380-74137399 MS.gene86671:intron 30.0%
GGAGGTAGCTATATAATTTA+TGG - chr7.4:74139800-74139819 MS.gene86671:CDS 30.0%
GGATTTATGAGTTCAAACTT+TGG - chr7.4:74140505-74140524 MS.gene86671:intron 30.0%
GGTAGTAATTGAATGTATGA+AGG + chr7.4:74141436-74141455 None:intergenic 30.0%
GTAAACAATTTGAGAAAGGA+TGG - chr7.4:74139373-74139392 MS.gene86671:intron 30.0%
TAACAATTAAGCTAAGCTCA+CGG + chr7.4:74141128-74141147 None:intergenic 30.0%
TACATTCAATTACTACCATC+AGG - chr7.4:74141439-74141458 MS.gene86671:intron 30.0%
TCTGTTAGAGTTACTCTAAA+TGG + chr7.4:74141090-74141109 None:intergenic 30.0%
TGAGCTTAGCTTAATTGTTA+GGG - chr7.4:74141128-74141147 MS.gene86671:intron 30.0%
TGGATAAAATCAAACACTGA+TGG - chr7.4:74138769-74138788 MS.gene86671:intron 30.0%
TTATGGTTTAAGTAGTCTAG+TGG + chr7.4:74141234-74141253 None:intergenic 30.0%
TTGTAATGTAACCACAATTG+TGG - chr7.4:74139868-74139887 MS.gene86671:CDS 30.0%
TTTCTTCTGATACTCATAAG+AGG - chr7.4:74137009-74137028 MS.gene86671:CDS 30.0%
! ACAATGATTCTTTGTGGTTT+TGG - chr7.4:74137788-74137807 MS.gene86671:intron 30.0%
! AGAAAATTTTCGTCGGATTT+TGG - chr7.4:74141258-74141277 MS.gene86671:intron 30.0%
! TGTTTCTTCTAAGAGACTTA+TGG - chr7.4:74136965-74136984 MS.gene86671:CDS 30.0%
! TTTTATAGAGACTTCGTAGT+TGG + chr7.4:74138225-74138244 None:intergenic 30.0%
!! CCAATTGTTAATGGACTTAT+TGG - chr7.4:74141631-74141650 MS.gene86671:CDS 30.0%
!! CTCATTCAAAGTTGATAATG+TGG + chr7.4:74140112-74140131 None:intergenic 30.0%
!! GAAGCAAAATGTTTGTTATG+AGG + chr7.4:74139426-74139445 None:intergenic 30.0%
!! GATTGATTTTGTAGAACAAG+TGG - chr7.4:74139028-74139047 MS.gene86671:intron 30.0%
!! TTTGTGTGTGTTTTAGACAT+GGG - chr7.4:74137741-74137760 MS.gene86671:intron 30.0%
AAACATTTCAACCAAAGTCG+AGG + chr7.4:74138914-74138933 None:intergenic 35.0%
AAATTGAACACAGTTTGTGG+AGG + chr7.4:74140204-74140223 None:intergenic 35.0%
AACAATGATCCTCCAATGTT+TGG + chr7.4:74141556-74141575 None:intergenic 35.0%
AACAATTAAGCTAAGCTCAC+GGG + chr7.4:74141127-74141146 None:intergenic 35.0%
AATTGAACACAGTTTGTGGA+GGG + chr7.4:74140203-74140222 None:intergenic 35.0%
ACAACAATGTCATGACTCAT+AGG - chr7.4:74137409-74137428 MS.gene86671:intron 35.0%
ACAATGATCCTCCAATGTTT+GGG + chr7.4:74141555-74141574 None:intergenic 35.0%
ACAATTGTGGCTACATTTGT+CGG - chr7.4:74139881-74139900 MS.gene86671:CDS 35.0%
AGTTATATCTTCTCGAACGA+AGG - chr7.4:74139095-74139114 MS.gene86671:intron 35.0%
ATTACCTTGGATTTGCCATT+AGG + chr7.4:74139498-74139517 None:intergenic 35.0%
CAAGGAGGTAATAGTGATAA+TGG - chr7.4:74141505-74141524 MS.gene86671:intron 35.0%
CAATGTAGACCTTTCTATTG+TGG - chr7.4:74138358-74138377 MS.gene86671:intron 35.0%
CACTTCAAAGAATGTGTGAA+AGG - chr7.4:74139735-74139754 MS.gene86671:CDS 35.0%
CTATGAAACAATGTTCCCTA+GGG - chr7.4:74138816-74138835 MS.gene86671:intron 35.0%
CTCGTTAAAAGAGTCCATTT+AGG - chr7.4:74141056-74141075 MS.gene86671:intron 35.0%
CTCTTGAACATCATTACCAT+TGG + chr7.4:74140685-74140704 None:intergenic 35.0%
CTTCGTAAACACAACATTCA+TGG + chr7.4:74137436-74137455 None:intergenic 35.0%
CTTGATCTAAGTGTGGTTAT+TGG - chr7.4:74139973-74139992 MS.gene86671:CDS 35.0%
CTTGCTTATCTTATGGATTC+AGG - chr7.4:74139758-74139777 MS.gene86671:CDS 35.0%
CTTTGAATGAGATTATCGTG+AGG - chr7.4:74140121-74140140 MS.gene86671:intron 35.0%
GAAAAACAAAGGTTGCAGTT+AGG - chr7.4:74137619-74137638 MS.gene86671:intron 35.0%
GACGTTGCATAATATATGCA+GGG - chr7.4:74141150-74141169 MS.gene86671:intron 35.0%
GAGTAGTTTACCATCTAACA+TGG - chr7.4:74141600-74141619 MS.gene86671:CDS 35.0%
GAGTCTGTTCCAATTGTTAA+TGG - chr7.4:74141622-74141641 MS.gene86671:CDS 35.0%
GATCTGAGAATATAGCTATG+AGG - chr7.4:74137880-74137899 MS.gene86671:intron 35.0%
GCAATGTTATGATATACGGA+TGG - chr7.4:74137182-74137201 MS.gene86671:CDS 35.0%
GGCTTCTATATAGAGTTCAA+AGG - chr7.4:74137379-74137398 MS.gene86671:intron 35.0%
GTGAGCTTAGCTTAATTGTT+AGG - chr7.4:74141127-74141146 MS.gene86671:intron 35.0%
TAACTGCATTTCCGTGTTTA+AGG - chr7.4:74140737-74140756 MS.gene86671:CDS 35.0%
TACTTGGATTGAACATGTTG+AGG - chr7.4:74139628-74139647 MS.gene86671:intron 35.0%
TAGTCGAATGTACTTTCCAA+TGG - chr7.4:74140666-74140685 MS.gene86671:CDS 35.0%
TCTAAGTGGTTCTTTGCAAT+TGG - chr7.4:74139122-74139141 MS.gene86671:intron 35.0%
TGATTCATCAATAATGAGCG+AGG - chr7.4:74141405-74141424 MS.gene86671:intron 35.0%
TGCAATTCAAAAAGACCTGA+CGG - chr7.4:74137464-74137483 MS.gene86671:intron 35.0%
TGGAAACTAATGAGCCTTTA+TGG - chr7.4:74138749-74138768 MS.gene86671:intron 35.0%
TTCATCCAAAACATGCCTAA+TGG - chr7.4:74139480-74139499 MS.gene86671:intron 35.0%
TTCTTGTCTTGATCTAAGTG+TGG - chr7.4:74139966-74139985 MS.gene86671:CDS 35.0%
TTTGATCTTAGTAGGATCCA+TGG + chr7.4:74137656-74137675 None:intergenic 35.0%
TTTGCCATTGTCACAATAGT+TGG + chr7.4:74139066-74139085 None:intergenic 35.0%
! ATCAATAGTGGAGTTGCATT+TGG - chr7.4:74139692-74139711 MS.gene86671:intron 35.0%
! ATCGAAGCTTCTAGAAATTC+TGG - chr7.4:74138871-74138890 MS.gene86671:CDS 35.0%
! ATTTGCCATTAGGCATGTTT+TGG + chr7.4:74139488-74139507 None:intergenic 35.0%
! CAATGGTAATGATGTTCAAG+AGG - chr7.4:74140683-74140702 MS.gene86671:CDS 35.0%
! CATTTTGCTTCGAAATTTCG+AGG - chr7.4:74139435-74139454 MS.gene86671:intron 35.0%
! GATTTTGTAGAACAAGTGGA+TGG - chr7.4:74139032-74139051 MS.gene86671:intron 35.0%
! GGTATTTTACCGCAAGATAA+AGG - chr7.4:74139902-74139921 MS.gene86671:CDS 35.0%
! TCAAAGCAGCTTTTATGTGT+TGG + chr7.4:74141666-74141685 None:intergenic 35.0%
! TGAAAGGCTTGCTTATCTTA+TGG - chr7.4:74139751-74139770 MS.gene86671:CDS 35.0%
! TTGCATTTGGAGCTGAAAAA+TGG - chr7.4:74139705-74139724 MS.gene86671:CDS 35.0%
!! CTTTGTGTGTGTTTTAGACA+TGG - chr7.4:74137740-74137759 MS.gene86671:intron 35.0%
!!! TGCAACCTTTGTTTTTCATC+AGG + chr7.4:74137616-74137635 None:intergenic 35.0%
AAATGCTCGACTCAAAGAAG+AGG - chr7.4:74137959-74137978 MS.gene86671:intron 40.0%
ACAAGCTCAAACCCAAACAT+TGG - chr7.4:74141541-74141560 MS.gene86671:intron 40.0%
ACAATTAAGCTAAGCTCACG+GGG + chr7.4:74141126-74141145 None:intergenic 40.0%
AGAACACGCTTTCTCATGTT+TGG + chr7.4:74137317-74137336 None:intergenic 40.0%
AGAAGCTTCGATGCGAATAT+TGG + chr7.4:74138863-74138882 None:intergenic 40.0%
ATATCTTCTCGAACGAAGGA+TGG - chr7.4:74139099-74139118 MS.gene86671:intron 40.0%
ATGCATCAGCTAGTCATAGA+TGG - chr7.4:74140085-74140104 MS.gene86671:intron 40.0%
ATTCCAAGACATGTAAGCGT+AGG + chr7.4:74138120-74138139 None:intergenic 40.0%
CCATGATGAAGCTAACACAA+AGG - chr7.4:74140034-74140053 MS.gene86671:CDS 40.0%
CCTAGGGAACATTGTTTCAT+AGG + chr7.4:74138818-74138837 None:intergenic 40.0%
CCTATGAAACAATGTTCCCT+AGG - chr7.4:74138815-74138834 MS.gene86671:intron 40.0%
CGATGAAAGAAAAAGATCCC+AGG - chr7.4:74140230-74140249 MS.gene86671:intron 40.0%
GAAGCTTCGATGCGAATATT+GGG + chr7.4:74138862-74138881 None:intergenic 40.0%
GAAGTAATTGCGAAACCTGA+TGG + chr7.4:74141457-74141476 None:intergenic 40.0%
GAATAGAAGGACTCAGATGA+AGG - chr7.4:74137687-74137706 MS.gene86671:intron 40.0%
GACAAATGTAGCCACAATTG+TGG + chr7.4:74139882-74139901 None:intergenic 40.0%
GATACTACAAGAAAGCTGTG+TGG - chr7.4:74141348-74141367 MS.gene86671:intron 40.0%
GATGAAGCTAACACAAAGGA+TGG - chr7.4:74140038-74140057 MS.gene86671:CDS 40.0%
GCTTACATGTCTTGGAATGT+TGG - chr7.4:74138122-74138141 MS.gene86671:intron 40.0%
GGACGTTGCATAATATATGC+AGG - chr7.4:74141149-74141168 MS.gene86671:intron 40.0%
GGTTTAAGTAGTCTAGTGGT+TGG + chr7.4:74141230-74141249 None:intergenic 40.0%
GGTTTCGCAATTACTTCTGA+TGG - chr7.4:74141460-74141479 MS.gene86671:intron 40.0%
GTGTGTGAACCTTTATCTTG+CGG + chr7.4:74139914-74139933 None:intergenic 40.0%
TAAGCGCATCTACTACCATT+TGG - chr7.4:74140169-74140188 MS.gene86671:intron 40.0%
TATCCTACGCTTACATGTCT+TGG - chr7.4:74138114-74138133 MS.gene86671:intron 40.0%
TCAGTGATTTCATCACCTGA+TGG - chr7.4:74140003-74140022 MS.gene86671:CDS 40.0%
TTGATGAACTTCCTGGTAGA+AGG + chr7.4:74138627-74138646 None:intergenic 40.0%
TTTCATCACCTGATGGAAAG+AGG - chr7.4:74140010-74140029 MS.gene86671:CDS 40.0%
! ATTAGGGGACATGGCTTTTA+CGG - chr7.4:74137256-74137275 MS.gene86671:CDS 40.0%
! CCTTTGTGTTAGCTTCATCA+TGG + chr7.4:74140037-74140056 None:intergenic 40.0%
! TTTTACCACTCGTGGGATTA+GGG - chr7.4:74137240-74137259 MS.gene86671:CDS 40.0%
!! CATGTTTTGGATGAAGCAAC+CGG + chr7.4:74139475-74139494 None:intergenic 40.0%
!! GCAAGAGCTGATTTTGCTTA+TGG - chr7.4:74138729-74138748 MS.gene86671:intron 40.0%
AACACGGAAATGCAGTTACC+AGG + chr7.4:74140735-74140754 None:intergenic 45.0%
AATGTTCCTTACCAACCTGC+TGG - chr7.4:74138655-74138674 MS.gene86671:intron 45.0%
ACAAAGGTTGCAGTTAGGCA+AGG - chr7.4:74137624-74137643 MS.gene86671:intron 45.0%
ACACGGAAATGCAGTTACCA+GGG + chr7.4:74140734-74140753 None:intergenic 45.0%
ACACTGCTGATCAGATCCAA+AGG - chr7.4:74137054-74137073 MS.gene86671:CDS 45.0%
ACTCTTACGCTTCAAGCCTT+TGG + chr7.4:74137073-74137092 None:intergenic 45.0%
AGCTCAAACCCAAACATTGG+AGG - chr7.4:74141544-74141563 MS.gene86671:intron 45.0%
ATCATGGTCCTCTTTCCATC+AGG + chr7.4:74140021-74140040 None:intergenic 45.0%
ATGATATACGGATGGGTACG+AGG - chr7.4:74137190-74137209 MS.gene86671:CDS 45.0%
ATGCATGTGTGGATTTGACC+GGG - chr7.4:74137217-74137236 MS.gene86671:CDS 45.0%
ATGTGGAGAAGTGAGATGTC+CGG + chr7.4:74141191-74141210 None:intergenic 45.0%
CAGGAATGGGGGAAACAAAA+TGG + chr7.4:74140802-74140821 None:intergenic 45.0%
CATGCATGTGTGGATTTGAC+CGG - chr7.4:74137216-74137235 MS.gene86671:CDS 45.0%
CATGCCTAATGGCAAATCCA+AGG - chr7.4:74139491-74139510 MS.gene86671:intron 45.0%
CTTATGGATTCAGGCCATTC+CGG - chr7.4:74139767-74139786 MS.gene86671:CDS 45.0%
GGAACAGACTCCATGTTAGA+TGG + chr7.4:74141613-74141632 None:intergenic 45.0%
GTTAGGCAAGGAATTAGCCA+TGG - chr7.4:74137636-74137655 MS.gene86671:intron 45.0%
TACGAGGAAACATGCATGTG+TGG - chr7.4:74137206-74137225 MS.gene86671:CDS 45.0%
TATTAGAGAGACCAGCAGGT+TGG + chr7.4:74138669-74138688 None:intergenic 45.0%
TCCTTATTAGAGAGACCAGC+AGG + chr7.4:74138673-74138692 None:intergenic 45.0%
TGTCATGAATGCCTCGACTT+TGG - chr7.4:74138900-74138919 MS.gene86671:CDS 45.0%
TTTACCACTCGTGGGATTAG+GGG - chr7.4:74137241-74137260 MS.gene86671:CDS 45.0%
TTTGTTTCCCCCATTCCTGA+GGG - chr7.4:74140803-74140822 MS.gene86671:intron 45.0%
! ACCTGCTGGTCTCTCTAATA+AGG - chr7.4:74138669-74138688 MS.gene86671:intron 45.0%
! AGAGTATCTAGCATTGCAGC+TGG - chr7.4:74138577-74138596 MS.gene86671:CDS 45.0%
! CTTATGGAGCATCACAGTGA+AGG - chr7.4:74136981-74137000 MS.gene86671:CDS 45.0%
! GGCAATGTTGATGAACTTCC+TGG + chr7.4:74138634-74138653 None:intergenic 45.0%
! GTTTTACCACTCGTGGGATT+AGG - chr7.4:74137239-74137258 MS.gene86671:CDS 45.0%
! TTTTGGATGAAGCAACCGGA+AGG + chr7.4:74139471-74139490 None:intergenic 45.0%
!! GCAGGTTGGTAAGGAACATT+TGG + chr7.4:74138655-74138674 None:intergenic 45.0%
!! TTTTGTTTCCCCCATTCCTG+AGG - chr7.4:74140802-74140821 MS.gene86671:intron 45.0%
!! TAAATAAAAAAACAAATAAA+TGG + chr7.4:74140778-74140797 None:intergenic 5.0%
!!! ACTTTTTTATTTTATTTTTT+AGG - chr7.4:74137569-74137588 MS.gene86671:intron 5.0%
!!! CTTTTTTATTTTATTTTTTA+GGG - chr7.4:74137570-74137589 MS.gene86671:intron 5.0%
!!! TTAAAAACTTTTTTTTTTTT+TGG + chr7.4:74138188-74138207 None:intergenic 5.0%
AACACAGTTTGTGGAGGGAG+AGG + chr7.4:74140198-74140217 None:intergenic 50.0%
AGCATTGCAGCTGGATACAC+TGG - chr7.4:74138586-74138605 MS.gene86671:CDS 50.0%
AGGGATCAGAGTTCGAATCC+CGG - chr7.4:74141169-74141188 MS.gene86671:intron 50.0%
ATAGCAAATGTTTCGCGCCC+TGG - chr7.4:74140714-74140733 MS.gene86671:CDS 50.0%
ATCCCACGAGTGGTAAAACC+CGG + chr7.4:74137238-74137257 None:intergenic 50.0%
CATTCCGGTCATATCGAAGG+AGG - chr7.4:74139782-74139801 MS.gene86671:CDS 50.0%
CGAACGAAGGATGGTCTAAG+TGG - chr7.4:74139108-74139127 MS.gene86671:intron 50.0%
CTACGTCACAGTTGAGCTGA+AGG + chr7.4:74140832-74140851 None:intergenic 50.0%
CTCCTTCGATATGACCGGAA+TGG + chr7.4:74139784-74139803 None:intergenic 50.0%
GAAAGCTGTGTGGACTCATC+AGG - chr7.4:74141358-74141377 MS.gene86671:intron 50.0%
GAAGAGTCAGCCTAATGGTG+AGG - chr7.4:74140143-74140162 MS.gene86671:intron 50.0%
GCTACCTCCTTCGATATGAC+CGG + chr7.4:74139789-74139808 None:intergenic 50.0%
GGACTCATCAGGTTCACTTG+TGG - chr7.4:74141369-74141388 MS.gene86671:intron 50.0%
GGATCTGATCAGCAGTGTGA+CGG + chr7.4:74137052-74137071 None:intergenic 50.0%
GTGAGGAAGAGTCAGCCTAA+TGG - chr7.4:74140138-74140157 MS.gene86671:intron 50.0%
TCACTGTCACACCTTCTACC+AGG - chr7.4:74138613-74138632 MS.gene86671:CDS 50.0%
TCAGCTCAACTGTGACGTAG+AGG - chr7.4:74140832-74140851 MS.gene86671:intron 50.0%
TGAAGGACACCCTCAGGAAT+GGG + chr7.4:74140815-74140834 None:intergenic 50.0%
TGTGGAGAAGTGAGATGTCC+GGG + chr7.4:74141190-74141209 None:intergenic 50.0%
AAGGACACCCTCAGGAATGG+GGG + chr7.4:74140813-74140832 None:intergenic 55.0%
ACTCGTGGGATTAGGGGACA+TGG - chr7.4:74137247-74137266 MS.gene86671:CDS 55.0%
AGCAACCGGAAGGAAGACGA+AGG + chr7.4:74139461-74139480 None:intergenic 55.0%
ATGTCCCCTAATCCCACGAG+TGG + chr7.4:74137248-74137267 None:intergenic 55.0%
CTGAAGGACACCCTCAGGAA+TGG + chr7.4:74140816-74140835 None:intergenic 55.0%
GAAGGACACCCTCAGGAATG+GGG + chr7.4:74140814-74140833 None:intergenic 55.0%
GCGCTTAGCACCTCACCATT+AGG + chr7.4:74140156-74140175 None:intergenic 55.0%
GGCCATTCCGGTCATATCGA+AGG - chr7.4:74139779-74139798 MS.gene86671:CDS 55.0%
TGACAACAAGCTGCACCGTC+AGG + chr7.4:74137482-74137501 None:intergenic 55.0%
TGGAGGGAGAGGTAGCCAAA+TGG + chr7.4:74140187-74140206 None:intergenic 55.0%
TTGAGCTGAAGGACACCCTC+AGG + chr7.4:74140821-74140840 None:intergenic 55.0%
! GACCGGGTTTTACCACTCGT+GGG - chr7.4:74137233-74137252 MS.gene86671:CDS 55.0%
! TGACCGGGTTTTACCACTCG+TGG - chr7.4:74137232-74137251 MS.gene86671:CDS 55.0%
!! GAGAGACCAGCAGGTTGGTA+AGG + chr7.4:74138664-74138683 None:intergenic 55.0%
CGAGGCCTTCGTCTTCCTTC+CGG - chr7.4:74139453-74139472 MS.gene86671:intron 60.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 74136942 74141699 74136942 ID=MS.gene86671
chr7.4 mRNA 74136942 74141699 74136942 ID=MS.gene86671.t1;Parent=MS.gene86671
chr7.4 exon 74141557 74141699 74141557 ID=MS.gene86671.t1.exon1;Parent=MS.gene86671.t1
chr7.4 CDS 74141557 74141699 74141557 ID=cds.MS.gene86671.t1;Parent=MS.gene86671.t1
chr7.4 exon 74140933 74141050 74140933 ID=MS.gene86671.t1.exon2;Parent=MS.gene86671.t1
chr7.4 CDS 74140933 74141050 74140933 ID=cds.MS.gene86671.t1;Parent=MS.gene86671.t1
chr7.4 exon 74140661 74140816 74140661 ID=MS.gene86671.t1.exon3;Parent=MS.gene86671.t1
chr7.4 CDS 74140661 74140816 74140661 ID=cds.MS.gene86671.t1;Parent=MS.gene86671.t1
chr7.4 exon 74139699 74140070 74139699 ID=MS.gene86671.t1.exon4;Parent=MS.gene86671.t1
chr7.4 CDS 74139699 74140070 74139699 ID=cds.MS.gene86671.t1;Parent=MS.gene86671.t1
chr7.4 exon 74139498 74139599 74139498 ID=MS.gene86671.t1.exon5;Parent=MS.gene86671.t1
chr7.4 CDS 74139498 74139599 74139498 ID=cds.MS.gene86671.t1;Parent=MS.gene86671.t1
chr7.4 exon 74139129 74139335 74139129 ID=MS.gene86671.t1.exon6;Parent=MS.gene86671.t1
chr7.4 CDS 74139129 74139335 74139129 ID=cds.MS.gene86671.t1;Parent=MS.gene86671.t1
chr7.4 exon 74138838 74139015 74138838 ID=MS.gene86671.t1.exon7;Parent=MS.gene86671.t1
chr7.4 CDS 74138838 74139015 74138838 ID=cds.MS.gene86671.t1;Parent=MS.gene86671.t1
chr7.4 exon 74138390 74138634 74138390 ID=MS.gene86671.t1.exon8;Parent=MS.gene86671.t1
chr7.4 CDS 74138390 74138634 74138390 ID=cds.MS.gene86671.t1;Parent=MS.gene86671.t1
chr7.4 exon 74137883 74137972 74137883 ID=MS.gene86671.t1.exon9;Parent=MS.gene86671.t1
chr7.4 CDS 74137883 74137972 74137883 ID=cds.MS.gene86671.t1;Parent=MS.gene86671.t1
chr7.4 exon 74136942 74137322 74136942 ID=MS.gene86671.t1.exon10;Parent=MS.gene86671.t1
chr7.4 CDS 74136942 74137322 74136942 ID=cds.MS.gene86671.t1;Parent=MS.gene86671.t1
Gene Sequence

>MS.gene86671

ATGGAGCATCACAGTGAAGGAAGTGTTTCTTCTAAGAGACTTATGGAGCATCACAGTGAAGGAAGTGTTTCTTCTGATACTCATAAGAGGAAGAAACGTCGTTGCAACCGTCACACTGCTGATCAGATCCAAAGGCTTGAAGCGTAAGAGTTCTATCTCTGTGTTAAAAATCTATTATTTTTGCACCCTTTATTTATTTATTTATTTATTTATTTATTTATTTATACGACACTTAGGCATGCAATGTTATGATATACGGATGGGTACGAGGAAACATGCATGTGTGGATTTGACCGGGTTTTACCACTCGTGGGATTAGGGGACATGGCTTTTACGGTATTACAGACATAAAAGTTGCGTCAAGCAAACATGCCAAACATGAGAAAGCGTGTTCTAATAATCAACATGTTTTTATACTATTTGTTTTTGACACTTTTGGCTTCTATATAGAGTTCAAAGGGTCATGCACAACAATGTCATGACTCATAGGTCCATGAATGTTGTGTTTACGAAGATTGGGTTTGCAATTCAAAAAGACCTGACGGTGCAGCTTGTTGTCAGTTTGCGTTCTATTAGTGTGTAATTAATCTATGATATAATAGTTTTTAATATATAATAGTTTATACGACTTTTTTATTTTATTTTTTAGGGTGTTTAAGACATGTTCATATCCTGATGAAAAACAAAGGTTGCAGTTAGGCAAGGAATTAGCCATGGATCCTACTAAGATCAAATTTTGGTTTCAGAATAGAAGGACTCAGATGAAGGTATTTATGTGTTTTTTAAATTATATTAGGGCTTTGTGTGTGTTTTAGACATGGGATTATCATATTTATTTGTGATTTCACAATGATTCTTTGTGGTTTTGGTTTGAACAAAACAGACACAACAAGAAAGAGATGATAACCGTATACTCATAGAAGAGAATGATAAAATAAGATCTGAGAATATAGCTATGAGGCAAGCCCTTAAAAATGTTATTTGCAGCACTTGTGATGAACAAAAGTTGAGAATTGAAAATGCTCGACTCAAAGAAGAGGTACGTAAATAATTAGTACAATATCCACTAATGCAAAAGAATTATGTGTGTATTCATTCTTATTTATTGCATGCACAATTTTAATGGTTAAATATGTTTAGTCCATACATGCACAATATTCTCTTGAATGACATATCCTACGCTTACATGTCTTGGAATGTTGGTTTAAATTTGTAATTTTCTTGAGATTTTGCCCCTTTTGTACCAAAAAAAAAAAAAGTTTTTAAATCTTATAATACTACCAACTACGAAGTCTCTATAAAAGCAAAATAAGGGCTAAAATTCAAAAAATATTTGTATGGACTAAACTTCAAAGATTGTGAATTAATTTTATAGGACAACAAAAAAAAATTAAACTTAGTTTAAAATTGCGGTTACAATGTAGACCTTTCTATTGTGGCAAAATATAGGAAAATGCGCTTGATGTAGTTGAAATTGTAGTTGCAATGTCGTTGCAGAGACCTTACTTTTTAAAATTCTTTTGTAATGTGGTTGCTTGTAGTGCATATCGCAATTTAAAACCATGTTTACATGTGTTGTATTTTGTATTTATGTGGCAAATTAAAATGGTGATTTGTGAACTTCTGTAGCTTGTTAGAGTATCTAGCATTGCAGCTGGATACACTGGAAAATCACTGTCACACCTTCTACCAGGAAGTTCATCAACATTGCCAAATGTTCCTTACCAACCTGCTGGTCTCTCTAATAAGGAAAAATCACTCATGTTAGGCATTGCTGAAAATGCAATGCAAGAGCTGATTTTGCTTATGGAAACTAATGAGCCTTTATGGATAAAATCAAACACTGATGGAAGAGATACTCTTAACCTTGAAACCTATGAAACAATGTTCCCTAGGGTTAATAATCAGTTAAAGAATCCCAATATTCGCATCGAAGCTTCTAGAAATTCTGGTGATGTTGTCATGAATGCCTCGACTTTGGTTGAAATGTTTATGGATCCTGTAAGAACTTCTTACTCTTTTATAGTGTTTTTTAAGATTTGAATTCACAAATTTAATTTAGTTAACTTAATTAAGCAAATTTAATGATTGATTTTGTAGAACAAGTGGATGGAGCTATTTCCAACTATTGTGACAATGGCAAAGACTATTGAAGTTATATCTTCTCGAACGAAGGATGGTCTAAGTGGTTCTTTGCAATTGGTACGATTAATTTTTTTTCGTCATTCGATTAGACTATAACACTTATTTTAGATTTATTTTTGTGTGGTGTTTCTACACGATGTCACTTAGATTCTAATTTTTCAACATGCATGCCAATTTCTCTTGCACATTGAATTAATTTTCATTCAATAATATTTTTAGATGTATGGAGAGTTGCAAGTGCTTTCACCACTTGTTCCTATTAGAGAATTTTACTTCCTACGTTACTGTAAACAATTTGAGAAAGGATGGGCAATAGTTGATGTTTCGTATGAATTTCCTCATAACAAACATTTTGCTTCGAAATTTCGAGGCCTTCGTCTTCCTTCCGGTTGCTTCATCCAAAACATGCCTAATGGCAAATCCAAGGTAATTAACTTTTAATTGAACACTATAAAATCTCATTTTGTTGGACACAATTTATTATTACATTAATATATATGAAGCATTTTTTAGTCACTCTTGTATATTTTAATTTATAGGTTACTTGGATTGAACATGTTGAGGTTGAAGACAGAAACCCAGTTCATATGCTTTATAAAAATGTTATCAATAGTGGAGTTGCATTTGGAGCTGAAAAATGGCTCACTACACTTCAAAGAATGTGTGAAAGGCTTGCTTATCTTATGGATTCAGGCCATTCCGGTCATATCGAAGGAGGTAGCTATATAATTTATGGTTTCAAATTGTAGTTGCGGTCACAATATAAATGTTTTAGAGGTCTTTGTAATGTAACCACAATTGTGGCTACATTTGTCGGTATTTTACCGCAAGATAAAGGTTCACACACACATCACATGAATTTCGATCATATATTTAATTTTCTTGTCTTGATCTAAGTGTGGTTATTGGAATTTTTTCAGTGATTTCATCACCTGATGGAAAGAGGACCATGATGAAGCTAACACAAAGGATGGTAACTAATTTCTGTGAAAGTATAAATGCATCAGCTAGTCATAGATGGACCACATTATCAACTTTGAATGAGATTATCGTGAGGAAGAGTCAGCCTAATGGTGAGGTGCTAAGCGCATCTACTACCATTTGGCTACCTCTCCCTCCACAAACTGTGTTCAATTTCTTGAACGATGAAAGAAAAAGATCCCAGGTTTGTTAAATACTTGATCAATACTCCCTCCAGACTCTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATATATATACACACACACACACAAAATTAAATGTTTGCTATCTTTGAAAAATGTGAAGCGGATATATATTTTTTAGTTGCCAGAATTTCACCTCTTAATATGAATAAGTGAGGATTTATGAGTTCAAACTTTGGTCCCTGCTTATTGTATTATATCTATCAGTTGAGTTATTCTAACGAAGATATAGTATGATTAATATTTATTTGATGTTATATGAAATACCTTAGAGTTAAAAGGTTTTCTTATTAACATTATTTTTCAATGTTGTTGTTTAGTCGAATGTACTTTCCAATGGTAATGATGTTCAAGAGGTTGTTCATATAGCAAATGTTTCGCGCCCTGGTAACTGCATTTCCGTGTTTAAGGTAAGACATTCTTCCTCCATTTATTTGTTTTTTTATTTATCCATTTTGTTTCCCCCATTCCTGAGGGTGTCCTTCAGCTCAACTGTGACGTAGAGGTCACAAGTTCTGATCCTAAAATAAGTCTCTCTATCTAATAGTCTCTATATCTACAAAAGTAAGAACCGCATGTACTAGCGAATGTACTAGCGACCCATTTTCAATAGAAACAACTAAAAATAGCTTCTCATTTGAAATATTTTTGAGATTTTGTTTCAAGAGAAGCTCCGACAAAAAAGAGTTTTTCTAATATCGATCGATCTCGTTAAAAGAGTCCATTTAGGACCTTATACCATTTAGAGTAACTCTAACAGACAAATGTCGTCGACCCCGTGAGCTTAGCTTAATTGTTAGGGACGTTGCATAATATATGCAGGGATCAGAGTTCGAATCCCGGACATCTCACTTCTCCACATTTAAAATTTGTGAACTCCAACCACTAGACTACTTAAACCATAAAAACAGAAAATTTTCGTCGGATTTTGGTTTTGTTTCTAATGTATTTTGTTAATCTGCAAATATAGGGTTTCAACACAAGTAACAACAACATGTTGATACTACAAGAAAGCTGTGTGGACTCATCAGGTTCACTTGTGGTGTCTTGTCCTGTTGATTCATCAATAATGAGCGAGGTAGATCCTTCATACATTCAATTACTACCATCAGGTTTCGCAATTACTTCTGATGGAAAGCAAAATGATAATAATATTCAAGGAGGTAATAGTGATAATGGTGATGTTGCATCAACAAGCTCAAACCCAAACATTGGAGGATCATTGTTAACAGTTGCATTTCAAATTATGGTGAGTAGTTTACCATCTAACATGGAGTCTGTTCCAATTGTTAATGGACTTATTGGTAAGACTGTCCAACACATAAAAGCTGCTTTGAATTGTCCTATGTAG
Protein sequence

>MS.gene86671.t1

MEHHSEGSVSSKRLMEHHSEGSVSSDTHKRKKRRCNRHTADQIQRLEAVFKTCSYPDEKQRLQLGKELAMDPTKIKFWFQNRRTQMKTQQERDDNRILIEENDKIRSENIAMRQALKNVICSTCDEQKLRIENARLKEELVRVSSIAAGYTGKSLSHLLPGSSSTLPNVPYQPAGLSNKEKSLMLGIAENAMQELILLMETNEPLWIKSNTDGRDTLNLETYETMFPRVNNQLKNPNIRIEASRNSGDVVMNASTLVEMFMDPNKWMELFPTIVTMAKTIEVISSRTKDGLSGSLQLMYGELQVLSPLVPIREFYFLRYCKQFEKGWAIVDVSYEFPHNKHFASKFRGLRLPSGCFIQNMPNGKSKVTWIEHVEVEDRNPVHMLYKNVINSGVAFGAEKWLTTLQRMCERLAYLMDSGHSGHIEGVISSPDGKRTMMKLTQRMVTNFCESINASASHRWTTLSTLNEIIVRKSQPNGEVLSASTTIWLPLPPQTVFNFLNDERKRSQSNVLSNGNDVQEVVHIANVSRPGNCISVFKGFNTSNNNMLILQESCVDSSGSLVVSCPVDSSIMSEVDPSYIQLLPSGFAITSDGKQNDNNIQGGNSDNGDVASTSSNPNIGGSLLTVAFQIMVSSLPSNMESVPIVNGLIGKTVQHIKAALNCPM